DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Kbtbd4 | mmu-miR-582-5p | beg:439 | end:454 | pic:3' TCATTGACCAACTT-GTTGACAT 5'& ||| |||||||| &5' -----------GAATCAACTGTA 3' |
Kbtbd4 | mmu-miR-138 | beg:425 | end:440 | pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& .|| ||||||| &5' ----------TACTTCACCAGC- 3' |
Kbtbd4 | mmu-miR-485 | beg:232 | end:247 | pic:3' CTTAAGTAGTGC-CGGTCGGAGA 5'& | |||||||||| &5' -----------GAGCCAGCCTCT 3' |
Kbtbd4 | mmu-miR-1962 | beg:251 | end:270 | pic:3' TACACAGGGTCACG-GTCGGAGA 5'& |..|| || |||||||| &5' ------CTTAG-GCACAGCCTCT 3' |
Kbtbd4 | mmu-miR-485 | beg:255 | end:270 | pic:3' CTTAAGTAGTGCCG-GTCGGAGA 5'& ||| |||||||| &5' -----------GGCACAGCCTCT 3' |
Kbtbd4 | mmu-miR-669h-5p | beg:296 | end:314 | pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& || .|| |||||||| &5' ---CTTGGCT-----CCCATGCA- 3' |
Kbtbd4 | mmu-miR-1935 | beg:176 | end:195 | pic:3' TCTCTAGGCGGTCG-GAGACGGA 5'& |.||. ||||||| &5' ------CTGCTTGAACTCTGCC- 3' |
Kbtbd4 | mmu-miR-22star | beg:2 | end:19 | pic:3' ATTTCGAACGGTGA-CTTCTTGA 5'& |. |. ||||||| &5' --------GTGATGAGAAGAAC- 3' |
Kbtbd4 | mmu-miR-18b | beg:288 | end:303 | pic:3' GATTGTCGTGATCTACGTGGAAT 5'& ||| |||||||. &5' -----------AGAAGCACCTTG 3' |
Kbtbd4 | mmu-miR-378star | beg:482 | end:500 | pic:3' TGTGTCCTGGACCT-CAGTCCTC 5'& |.||| ||||||| &5' -------ATCTGTCTGTCAGGA- 3' |
Kbtbd4 | mcmv-miR-m108-1 | beg:69 | end:86 | pic:3' GCTGTGCTCGGTGG-C-AGTCTTT 5'& || || | |||||.| &5' ---------CC-CCAGTTCAGAGA 3' |
Kbtbd4 | mcmv-miR-m21-1 | beg:182 | end:207 | pic:3' GCCGAACTTGC-AC------AGGGGATA 5'& |||||| || ||||||.| &5' ----TTGAACTCTGCCATTATCCCCTGT 3' |
Kbtbd4 | mcmv-miR-M23-1-3p | beg:296 | end:317 | pic:3' CCGGAGCCC-GGCTGCGTCCTC 5'& |||.|| || |.|||||| &5' --CCTTGGCTCCCATGCAGGA- 3' |
Kbtbd4 | mcmv-miR-M23-2 | beg:59 | end:77 | pic:3' GGCGAACTGGCTCC--GGGGGTA 5'& |.||. |||||| &5' -------ATCGGTAATCCCCCA- 3' |
Kbtbd4 | mcmv-miR-m59-1 | beg:158 | end:179 | pic:3' GACTGCCAGCTCC--GTGACGATT 5'& || |||||||. &5' -----GGGCTTTTCACACTGCTG- 3' |
Kbtbd4 | mcmv-miR-M87-1 | beg:170 | end:195 | pic:3' CGACGGCGACG-GCTGCCGACGGA 5'& ||||.||||| .|| ||||| &5' -CTGCTGCTGCTTGAACTCTGCC- 3' |
Kbtbd4 | mcmv-miR-m88-1 | beg:205 | end:225 | pic:3' TCTGGGGC-TGTAGCTGAAGAC 5'& ||.||.| .| || ||||| &5' -GATCCTGTGCCTC-ACTTC-- 3' |
Kbtbd4 | mghv-miR-M1-3 | beg:202 | end:225 | pic:3' TTCGCGTTGAGGAC---GAGTGGAG 5'& |.| ||||| |||||.|| &5' --GTGA---TCCTGTGCCTCACTTC 3' |
Kbtbd4 | mghv-miR-M1-3 | beg:469 | end:489 | pic:3' TTCGCGTTGA-GGACGAGTGGAG 5'& ||| ..| ||||.|| &5' -----CAAATGTTTTCTCATCT- 3' |
Kbtbd4 | mmu-let-7a | beg:200 | end:221 | pic:3' TTGATATGTTGGATGATGGAGT 5'& ||.|. |||. |.||||| &5' --CTGTGAT-CCTG-TGCCTCA 3' |
Kbtbd4 | mmu-let-7c | beg:199 | end:221 | pic:3' TTGGTATGTT-GGATGATGGAGT 5'& || |. | |||. |.||||| &5' --CCCTGTGATCCTG-TGCCTCA 3' |
Kbtbd4 | mmu-let-7g | beg:200 | end:221 | pic:3' TTGACATGTTTGATGATGGAGT 5'& ||||. | ||. |.||||| &5' --CTGTG-ATCCTG-TGCCTCA 3' |
Kbtbd4 | mmu-let-7gstar | beg:140 | end:162 | pic:3' CGTTCCGTCACCGGACATGTCA 5'& || || | || ||||..|| &5' -CATGGGA-TGCTCTGTGTAG- 3' |
Kbtbd4 | mmu-miR-1195 | beg:172 | end:191 | pic:3' ACTCGTCCGACCGGAGCTTGAGT 5'& || |||| ||.|||||| &5' ---GCT-GCTG--CTTGAACTC- 3' |
Kbtbd4 | mmu-miR-122 | beg:207 | end:226 | pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& || || | ||||.|| &5' ------CCTGTGCCTCACTTCA 3' |
Kbtbd4 | mmu-miR-130b | beg:472 | end:494 | pic:3' TACGGGAAAGTAGTAACGTGAC 5'& |||...| ||||| ||. ||| &5' ATGTTTTCTCATC--TGT-CTG 3' |
Kbtbd4 | mmu-miR-141 | beg:266 | end:288 | pic:3' GGTAGA-AATGGTCT-GTCACAAT 5'& ||| |||||||| |||||||| &5' ---TCTCTTACCAGATCAGTGTTA 3' |
Kbtbd4 | mmu-miR-149 | beg:222 | end:241 | pic:3' CCCTCACTTCTG-TGC--CTCGGTCT 5'& |||| .| ||||||| &5' --------AGACTGCTTAGAGCCAG- 3' |
Kbtbd4 | mmu-miR-149 | beg:533 | end:548 | pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& |||.| ||||||| &5' --------AGATA---AGCCAGA 3' |
Kbtbd4 | mmu-miR-15b | beg:171 | end:182 | pic:3' ACATTTGGTACTACACGACGAT 5'& |||||||. &5' --------------TGCTGCTG 3' |
Kbtbd4 | mmu-miR-16 | beg:160 | end:182 | pic:3' GCGGTTATAAATGCACGACGAT 5'& ||. || |||||||. &5' -GCTTTTCAC-AC-TGCTGCTG 3' |
Kbtbd4 | mmu-miR-1896 | beg:67 | end:86 | pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& ||| |||| . ||||||| &5' -TCC---CCCAGT-TCAGAGA- 3' |
Kbtbd4 | mmu-miR-1898 | beg:195 | end:219 | pic:3' CTAGGGGACACTTGGAACTGGA 5'& ||||||||||| ||| .||| &5' -ATCCCCTGTGATCCTGTGCCT 3' |
Kbtbd4 | mmu-miR-18a | beg:280 | end:303 | pic:3' GATAGACGTGA----TCTACGTGGAAT 5'& | .| ||| |||||||. &5' ------GTGTTAAAAAGAAGCACCTTG 3' |
Kbtbd4 | mmu-miR-1902 | beg:106 | end:126 | pic:3' TTCAGTACGGATGACGTGGAGA 5'& || | .| ||.|||| &5' --GTGAGAAAGGCAGCGCCTC- 3' |
Kbtbd4 | mmu-miR-1906 | beg:160 | end:183 | pic:3' TCGGGACGGAGTC-CGACGACGT 5'& .||..| .| || |||||||| &5' GGCTTT-TCACACTGCTGCTGC- 3' |
Kbtbd4 | mmu-miR-1907 | beg:163 | end:185 | pic:3' TGGAGGTCTAGGA-GACGACGAG 5'& ||.. || ||||||||. &5' --CTTTTCACACTGCTGCTGCTT 3' |
Kbtbd4 | mmu-miR-1929 | beg:608 | end:633 | pic:3' GAGACGAGAT-ATTTCA-GGATCTT 5'& ||||| ||| ||||| .||| &5' CTCTGGTCTTTTAAAGGCTCTA--- 3' |
Kbtbd4 | mmu-miR-195 | beg:160 | end:184 | pic:3' CGGTTATAAAGAC-ACGACGAT 5'& ||. ||| ||||||| &5' GCTTTTCACACTGCTGCTGCT- 3' |
Kbtbd4 | mmu-miR-1957 | beg:468 | end:490 | pic:3' CAGTATACGAGATGGT-GAC 5'& ||| |||.|.| || ||| &5' -TCAAATGTTTTCTCATCTG 3' |
Kbtbd4 | mmu-miR-1962 | beg:226 | end:247 | pic:3' TACACAGGGTCACGGTCGGAGA 5'& || |..|| |||||||||| &5' ---TG-CTTAGAGCCAGCCTCT 3' |
Kbtbd4 | mmu-miR-196b | beg:213 | end:235 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& ||. || ||| |||.|.|| &5' CCTCACTTCAG---ACTGCTTA 3' |
Kbtbd4 | mmu-miR-1971 | beg:228 | end:245 | pic:3' AGAGTCG-GGTCGGAAATG 5'& ||.|| ||||||| &5' -CTTAGAGCCAGCCT---- 3' |
Kbtbd4 | mmu-miR-200a | beg:266 | end:288 | pic:3' TGTAGCAATGGTCT-GTCACAAT 5'& || |||||||| |||||||| &5' ---TC-TTACCAGATCAGTGTTA 3' |
Kbtbd4 | mmu-miR-200b | beg:266 | end:288 | pic:3' AGTAGTAATGGTCC-GTCATAAT 5'& || ||||||| ||||.||| &5' ---TC-TTACCAGATCAGTGTTA 3' |
Kbtbd4 | mmu-miR-202-3p | beg:196 | end:220 | pic:3' AGAAGGGTACGC---GATATGGAGA 5'& |||| ||.| ||.|.|||| &5' ---TCCCCTGTGATCCTGTGCCTC- 3' |
Kbtbd4 | mmu-miR-2134 | beg:124 | end:142 | pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||| ||||||.| &5' --ACCCATC--CCCAAGGC 3' |
Kbtbd4 | mmu-miR-218 | beg:248 | end:265 | pic:3' TGTACCAATCT-AGTTCGTGTT 5'& ||| |.|.|||||. &5' --------AGACTTAGGCACAG 3' |
Kbtbd4 | mmu-miR-26b | beg:170 | end:188 | pic:3' TGGATAGGACTTA-ATGAACTT 5'& ||| |.|||||| &5' -------CTGCTGCTGCTTGAA 3' |
Kbtbd4 | mmu-miR-26bstar | beg:0 | end:21 | pic:3' CTCGGTTCATTAC-C-TCTTGTCC 5'& | |||.||| | ||||||| &5' ----C-AGTGATGAGAAGAACAG- 3' |
Kbtbd4 | mmu-miR-27a | beg:189 | end:209 | pic:3' CGCCTTGAATCGGT-------GACACTT 5'& |||| |||||| &5' ----------GCCATTATCCCCTGTGA- 3' |
Kbtbd4 | mmu-miR-29bstar | beg:527 | end:547 | pic:3' ATTTGGTGGTATACTTTGGTCG 5'& || || ||.|||| &5' ---ACAAACAGAT-AAGCCAG- 3' |
Kbtbd4 | mmu-miR-30astar | beg:664 | end:682 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& .||||.|. |||||| &5' ----TAAACGTTT--CTGAAA- 3' |
Kbtbd4 | mmu-miR-30estar | beg:664 | end:682 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& |||||.|. |||||| &5' ----TAAACGTTT--CTGAAA- 3' |
Kbtbd4 | mmu-miR-324-5p | beg:132 | end:153 | pic:3' TGTGGTTACGGGATCCCCTACGC 5'& |||| ||.| ||||||| &5' ---CCAAGGCTCAT-GGGATGC- 3' |
Kbtbd4 | mmu-miR-330 | beg:218 | end:238 | pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& |.| |||| ||..|||| &5' -CTTCAGACT---GCTTAGAG- 3' |
Kbtbd4 | mmu-miR-345-3p | beg:61 | end:83 | pic:3' CAGAGGTCT---GGGGATCAAGTCC 5'& .|.| |||| ||||||| &5' ----TCGGTAATCCCCCAGTTCAG- 3' |
Kbtbd4 | mmu-miR-3473 | beg:227 | end:249 | pic:3' CCGA--CTCGGTA-GAGAGGT 5'& ||| |||||| ||||.| &5' -GCTTAGAGCCAGCCTCTTC- 3' |
Kbtbd4 | mmu-miR-3475 | beg:574 | end:595 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||.| ||| ..|||||| &5' --CAGAAACTGT-TTTCCAGA 3' |
Kbtbd4 | mmu-miR-376c | beg:142 | end:160 | pic:3' TGCACTTTAAAGGAGATACAA 5'& || || ||||.||| &5' ---TGGGATG--CTCTGTGT- 3' |
Kbtbd4 | mmu-miR-378star | beg:641 | end:653 | pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& ||||.|||| &5' ------------GAGTTAGGA- 3' |
Kbtbd4 | mmu-miR-383 | beg:550 | end:572 | pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& || ||| | . |||||||. &5' AGAAACAATTGT-TTCTGATT- 3' |
Kbtbd4 | mmu-miR-383 | beg:603 | end:620 | pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |||||| ||||.||| &5' ----ACAGTC----TCTGGTCT 3' |
Kbtbd4 | mmu-miR-429 | beg:268 | end:288 | pic:3' TGCCGTAATGGTCT-GTCATAAT 5'& |||||||| ||||.||| &5' ------TTACCAGATCAGTGTTA 3' |
Kbtbd4 | mmu-miR-450a-3p | beg:122 | end:139 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||| ||||||||| &5' -------CAACCCATCCCCAA- 3' |
Kbtbd4 | mmu-miR-450a-3p | beg:39 | end:59 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || . |.|||||||.| &5' -----TGTGGTGTATCCCCAGT 3' |
Kbtbd4 | mmu-miR-450b-3p | beg:573 | end:593 | pic:3' TACGTACGTTTT--AC-AAGGGTTA 5'& |||.|| || ||.|||. &5' ------GCAGAAACTGTTTTCCAG- 3' |
Kbtbd4 | mmu-miR-450b-5p | beg:436 | end:457 | pic:3' ATAAGTCCTTGTATGACGTTTT 5'& || |||. ||||.|||| &5' ----CAAGAATCAACTGTAAAA 3' |
Kbtbd4 | mmu-miR-465a-3p | beg:609 | end:632 | pic:3' AGAT--GAATCTTTCCGGGACTAG 5'& |||. ||| ||||||.|| &5' TCTGGTCTTTTAAAGGCTCT---- 3' |
Kbtbd4 | mmu-miR-465b-3p | beg:609 | end:632 | pic:3' AGAT--GAATCTTTCCGGGACTAG 5'& |||. ||| ||||||.|| &5' TCTGGTCTTTTAAAGGCTCT---- 3' |
Kbtbd4 | mmu-miR-465c-3p | beg:609 | end:632 | pic:3' AGAT--GAATCTTTCCGGGACTAG 5'& |||. ||| ||||||.|| &5' TCTGGTCTTTTAAAGGCTCT---- 3' |
Kbtbd4 | mmu-miR-465c-5p | beg:623 | end:642 | pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& .|| |.| ||||||| &5' ------GGCTCTAAGCTAAATA 3' |
Kbtbd4 | mmu-miR-486 | beg:299 | end:317 | pic:3' GAGCCCCGTCGAGTC-ATGTCCT 5'& .|||| |.||||| &5' --------GGCTCCCATGCAGGA 3' |
Kbtbd4 | mmu-miR-488 | beg:159 | end:171 | pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .||.||||| &5' -----------GGCTTTTCA- 3' |
Kbtbd4 | mmu-miR-497 | beg:160 | end:184 | pic:3' ATGTTTGGTGTCAC-ACGACGAC 5'& .| .|||| || ||||||| &5' -GCTTTTCACACTGCTGCTGCT- 3' |
Kbtbd4 | mmu-miR-503 | beg:160 | end:182 | pic:3' GACGTCATGACAAG---GGCGACGAT 5'& .|| ||| |.||||||. &5' -------GCTTTTCACACTGCTGCTG 3' |
Kbtbd4 | mmu-miR-511 | beg:98 | end:119 | pic:3' ACTCACGTCT-CG--TTTTCCGTA 5'& ||| |. .||||||| &5' -----GCATATGTGAGAAAGGCA- 3' |
Kbtbd4 | mmu-miR-544 | beg:296 | end:317 | pic:3' CTCGAA-CGATTTTTACGTCTTA 5'& ||| ||| ||||||.| &5' ---CTTGGCTCCC-ATGCAGGA- 3' |
Kbtbd4 | mmu-miR-654-5p | beg:256 | end:277 | pic:3' TGTGTACAAGACGTCGAATGGT 5'& .|||| ||| ||||||| &5' GCACAGCCTCT----CTTACCA 3' |
Kbtbd4 | mmu-miR-668 | beg:342 | end:359 | pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& ||| |||||||||.| &5' --------GCC-AGCCGAGTGGC- 3' |
Kbtbd4 | mmu-miR-691 | beg:297 | end:318 | pic:3' AAAAGACGGAGAGAA-GTCCTTA 5'& .|| ||| | |||||| &5' ----TTGGCTCCCATGCAGGAA- 3' |
Kbtbd4 | mmu-miR-691 | beg:483 | end:501 | pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||||.|| ||||||| &5' ---TCTGTCTG---TCAGGAA- 3' |
Kbtbd4 | mmu-miR-705 | beg:118 | end:138 | pic:3' ACGG-GTGGGGTGGAGGGTGG 5'& ||| || ||||.| |||| &5' -GCCTCAACCCATC-CCCA-- 3' |
Kbtbd4 | mmu-miR-741 | beg:255 | end:274 | pic:3' AGATGTATCTTACCGT-----AGAGAGT 5'& |||| |||||.| &5' ------------GGCACAGCCTCTCTTA 3' |
Kbtbd4 | mmu-miR-760 | beg:221 | end:240 | pic:3' AGGGGTGTCTGG---GTCTCGGC 5'& |||||. .|||||| &5' ------CAGACTGCTTAGAGCC- 3' |
Kbtbd4 | mmu-miR-762 | beg:225 | end:246 | pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& ||| |. | ||||||.| &5' ---CTG-CTTAGAGCCAGCCTC 3' |
Kbtbd4 | mmu-miR-767 | beg:29 | end:51 | pic:3' ACGAGTCTGTTGGTACCACGT 5'& ||| | . |||||.| &5' TGCCCTCCCC-TTGTGGTGTA 3' |
Kbtbd4 | mmu-miR-7b | beg:570 | end:593 | pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |.|.||.|| || ||.||||| &5' ATAGCAGAA--ACT-GTTTTCCA 3' |
Kbtbd4 | mmu-miR-1186b | beg:60 | end:74 | pic:3' CACCACGTACGGAAATTAGGGT 5'& .| ||||||| &5' ----------TCGGTAATCCC- 3' |
Kbtbd4 | mmu-miR-133astar | beg:262 | end:278 | pic:3' TAAACCAAGGTAA-AATGGTCG 5'& || ||||||| &5' --------CCTCTCTTACCAG- 3' |