DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Ube2m; Ubc-rs2; Ubc12 ATTTA 250-801 857-861 Ube2m; Ubc-rs2; Ubc12 WTATTTATW 250-801 855-863 Ube2m; Ubc-rs2; Ubc12 WWATTTAWW 250-801 855-863

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000374 mmu-miR-296-5p 22192 Ube2m uguccUAACUCCCCCCCGGGa ||| | |||||||| caaauAUUUAUUGGGGGCCCg 2 17 51 71 [mm9:7:13620892-13620912:-] 0.5819 156 7 -19.71 -0.2387 MIMAT0004635 mmu-miR-92a* 22192 Ube2m cauUACGGUGGUUAGGGGUGGa | || ||| | ||||||| cccAAGCAACCCA-CCCCACCa 2 20 312 332 [mm9:7:13620631-13620651:-] 0.5938 157 7 -20.90 -0.7485 MIMAT0004638 mmu-miR-323-5p 22192 Ube2m cgcuugcgcggugcCUGGUGGa ||||||| guuauuuuuuuuuuGACCACCa 2 9 140 161 [mm9:7:13620802-13620823:-] 0.6412 140 7 -15.79 -1.2729 MIMAT0003186 mmu-miR-369-3p 22192 Ube2m uuuCUAGUUGGUACA-UAAUAa || | |||| || ||||| uuuGA-CCACCACGUGAUUAUg 2 19 151 171 [mm9:7:13620792-13620812:-] 0.6827 124 0 -7.36 -0.2792 MIMAT0004187 mmu-miR-744 22192 Ube2m acgaCAAUCGGGAUCGGGG-CGu | |||||:|:||||| || guggGGUAGCCUUGGCCCCUGCc 2 19 82 104 [mm9:7:13620859-13620881:-] 0.5819 138 0 -29.44 -0.2716 MIMAT0003891 mmu-miR-770-3p 22192 Ube2m ggUCGAGGUGCAGUCC-GGGUGc | | |||| ||| ||||| ccACCACCACUGGAGGUCCCACc 2 21 327 349 [mm9:7:13620614-13620636:-] 0.6286 124 0 -22.66 -0.3630 MIMAT0004188 mmu-miR-802 22192 Ube2m uuccuacuuagaaACAAUGACu |||||||| uauuaaaggggaaUGUUACUGc 2 10 354 375 [mm9:7:13620588-13620609:-] 0.6634 145 7 -16.19 -0.8846 MIMAT0004825 mmu-miR-423-5p 22192 Ube2m uuucAGAGCGAG-AGACGGGGAgu || | || |||||||| cucuUCCCUGUCACCUGCCCCUag 3 20 117 140 [mm9:7:13620823-13620846:-] 0.5996 134 0 -18.12 -0.1268 MIMAT0003511 mmu-miR-450b-5p 22192 Ube2m auaaGUCCUUGUAUGACGUUUu |||| |: ||||||| ggccCAGGCAUCCCCUGCAAAu 2 19 34 55 [mm9:7:13620908-13620929:-] 0.5806 154 7 -14.30 -0.2208 MIMAT0005830 mmu-miR-466l 22192 Ube2m uuauacacACGUACAUAAAUAu |||| ||||||| gcauccccUGCAAAUAUUUAUu 2 15 41 62 [mm9:7:13620901-13620922:-] 0.5806 154 7 -7.12 -0.1395 MIMAT0009402 mmu-miR-1938 22192 Ube2m cuggcuUGAUGUUCAGGGUGGc |||: |:|||||||| accaccACUGGAGGUCCCACCa 2 17 329 350 [mm9:7:13620613-13620634:-] 0.6286 164 7 -27.51 -0.2901 MIMAT0012774 mmu-miR-664 22192 Ube2m aucCGA-CCCCU--CAUUUACUUAu ||| | || | |||||||| ccuGCUCAGCGAUGGGAAAUGAAUu 2 20 194 218 [mm9:7:13620745-13620769:-] 0.6933 149 7 -12.82 -0.5619 MIMAT0015643 mmu-miR-3472 22192 Ube2m ccaaggaAGGUCGAAGACCGAUAAu ||| | | ||||||| cuggaggUCC--CACCAGGCUAUUa 2 19 336 358 [mm9:7:13620605-13620627:-] 0.6286 143 7 -18.48 -0.8704 MIMAT0004528 mmu-miR-125a-3p 22192 Ube2m ccGAGGGUUCUUGGAGUGGACa |||:| : ||||||| gcCUCUCUUCCCUGUCACCUGc 2 21 113 134 [mm9:7:13620829-13620850:-] 0.5996 144 7 -19.33 -0.2651 MIMAT0004577 mmu-miR-299 22192 Ube2m uucgCCAAAUGGCAGGGU--GUAu || |||||| |||| ||| gccaGGGUUACCGGCCCAGGCAUc 2 19 22 45 [mm9:7:13620918-13620941:-] 0.5793 122 0 -20.25 -0.1807 MIMAT0000567 mmu-miR-329 22192 Ube2m uuuuuccaaUCGACCCACACAa :|: ||||||| gggggcccgGGUAAGGUGUGUg 2 14 63 84 [mm9:7:13620879-13620900:-] 0.5819 141 7 -15.67 -0.3116 MIMAT0004684 mmu-miR-362-3p 22192 Ube2m acuuaGGAACUUGUCCACACAa || |: |||||||| gggggCCCGGGUAAGGUGUGUg 2 18 63 84 [mm9:7:13620879-13620900:-] 0.5819 149 7 -22.16 -0.3168 MIMAT0003168 mmu-miR-543 22192 Ube2m uucuucacguggCGCUUACAAa | ||||||| aggcuauuaaagGGGAAUGUUa 2 11 350 371 [mm9:7:13620592-13620613:-] 0.6634 142 7 -7.84 -0.4110 MIMAT0003172 mmu-miR-542-3p 22192 Ube2m aaagucaauaguuaGACAGUGu ||||||| cuugccucucuuccCUGUCACc 2 9 110 131 [mm9:7:13620832-13620853:-] 0.5907 140 7 -10.20 -0.2997 MIMAT0003486 mmu-miR-491 22192 Ube2m ggaguaccuucccaAGGGGUGa ||||||| gggugcuguccaacUCCCCACu 2 9 248 269 [mm9:7:13620694-13620715:-] 0.6099 140 7 -19.48 -0.2619

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G060872 Ube2m Mus musculus 22192 19536157

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ube2m mmu-miR-664 beg:199 end:218 pic:3' ATCCGAC-CCCTCATTTACTTAT 5'& || |||| ||||||| &5' ---GCGATGGGA---AATGAAT- 3' Ube2m mmu-miR-92astar beg:314 end:332 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& || ||| ||||||| &5' -----GCAACCCA-CCCCACC- 3' Ube2m mmu-miR-709 beg:169 end:187 pic:3' AGGAGGACGGA---GACGGAGG 5'& |.| |||||||| &5' -------GTCGGTGCTGCCTCC 3' Ube2m mmu-miR-542-3p beg:121 end:131 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||||| &5' --------------CTGTCAC- 3' Ube2m mmu-miR-362-3p beg:66 end:84 pic:3' ACTTAGGAACTTGTCCACACAA 5'& || | |||||||| &5' -----CCGGGTA-AGGTGTGT- 3' Ube2m mmu-miR-329 beg:69 end:84 pic:3' TTTTTCCAATCGACCCACACAA 5'& .|. ||||||| &5' ---------GGTAAGGTGTGT- 3' Ube2m mmu-miR-802 beg:356 end:375 pic:3' TTCCTACTTAGAAACAATGACT 5'& ||||. ||| |||||||| &5' AAGGG-GAA----TGTTACTG- 3' Ube2m mcmv-miR-m21-1 beg:30 end:51 pic:3' GCCGAACTTGCACAGGGGATA 5'& |||| ..| ||||||. &5' CGGCCCAGGCA--TCCCCTG- 3' Ube2m mghv-miR-M1-8 beg:234 end:255 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& || |.|||. ||.||||| &5' --CCCC-CTCCCGCTGGGTGCT 3' Ube2m mmu-miR-107 beg:162 end:183 pic:3' ACTATCGGGACATGTTACGACGA 5'& |||| || |..|||||| &5' TGATTA---TGGTCGGTGCTGC- 3' Ube2m mmu-miR-138star beg:74 end:93 pic:3' GGGACCACAACACTTCATCGGC 5'& |||| ||||..|||||| &5' ----GGTG-TGTGGGGTAGCC- 3' Ube2m mmu-miR-150star beg:339 end:363 pic:3' GATAGGG-GGTCCGGACATGGTC 5'& .|||| ||||||. || .| &5' --GTCCCACCAGGCTATTAAAGG 3' Ube2m mmu-miR-188-3p beg:266 end:283 pic:3' ACGTTTGGGACGTACACCCTC 5'& .|.|| ||||||. &5' ------TCTTGACTGTGGGG- 3' Ube2m mmu-miR-1898 beg:94 end:112 pic:3' CTAGGGGACACTTGGAACTGGA 5'& |||||| |||||.||| &5' ---CCCCTG----CCTTGGCCT 3' Ube2m mmu-miR-1906 beg:95 end:115 pic:3' TC-GGGACGGAGTCCGACGACGT 5'& | ||||||||. ||| .||| &5' -GCCCCTGCCTT-GGCC-TTGC- 3' Ube2m mmu-miR-1951 beg:338 end:359 pic:3' ATCGGTGTGGTCAGAGGTGATG 5'& .|.| |||||| |.|.|| &5' -GGTCCCACCAGG--CTATTA- 3' Ube2m mmu-miR-1959 beg:31 end:49 pic:3' GAGGTGACTCGA---TGTAGGGG 5'& || .|| .||||||| &5' --CC----GGCCCAGGCATCCCC 3' Ube2m mmu-miR-1982star beg:179 end:203 pic:3' GGAGGGGTC-CTGGGAGGGTT 5'& ||||||| ||||. |.||. &5' CCTCCCCCCCGACCTGCTCAG 3' Ube2m mmu-miR-202-5p beg:199 end:212 pic:3' TTTCTTCATATACG-TATCCTT 5'& || ||.|||| &5' ------------GCGATGGGAA 3' Ube2m mmu-miR-2132 beg:125 end:136 pic:3' GTAGCGCAGTTGTGGGCGG 5'& ||||.||| &5' -----------CACCTGCC 3' Ube2m mmu-miR-2136 beg:0 end:17 pic:3' GTGTAGAGTCAGTT-GTGGGTC 5'& |.|| ||| .||||| &5' ------TTAG-CAATTACCCA- 3' Ube2m mmu-miR-2140 beg:331 end:350 pic:3' TGGTGGTT-CTAGACGTGGA 5'& ||||| . |.|| |||| &5' ACCACTGGAGGTCC-CACC- 3' Ube2m mmu-miR-2145 beg:86 end:115 pic:3' TTGGT-CCGGG-------CTGGGACGA 5'& |.|| ||||| |.||.||| &5' AGCCTTGGCCCCTGCCTTGGCCTTGC- 3' Ube2m mmu-miR-2861 beg:169 end:189 pic:3' GGCGG--GCGGCGGTCCGGGG 5'& |.| .||.||| |||| &5' --GTCGGTGCTGCCTC-CCCC 3' Ube2m mmu-miR-296-5p beg:60 end:71 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& |||||||| &5' ------------GGGGGCCC- 3' Ube2m mmu-miR-30astar beg:330 end:343 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& || ||||.|.| &5' -----------CC-ACTGGAGG 3' Ube2m mmu-miR-342-3p beg:67 end:88 pic:3' TGCCCACGCTAAAGACACACTCT 5'& ||||| |. ||||||.|. &5' -CGGGTAAGG----TGTGTGGGG 3' Ube2m mmu-miR-3472 beg:338 end:359 pic:3' CCAAGGAAGGTCGAAGACCGATAAT 5'& || ||| ||| |||||||| &5' GG-TCCCACCA------GGCTATTA 3' Ube2m mmu-miR-3473 beg:104 end:123 pic:3' CCGACTCGGTAGAGAGGT 5'& ||| ||| |||||.| &5' GGCCTTGCC-TCTCTTC- 3' Ube2m mmu-miR-34cstar beg:267 end:289 pic:3' GGACCGACACACCAATCACTAA 5'& |.|| ||||| ||| ||||. &5' CTTGACTGTGGGGTAAGTGG-- 3' Ube2m mmu-miR-450b-5p beg:35 end:55 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |||| |. ||||||| &5' ----CAGGCATCCCCTGCAAA- 3' Ube2m mmu-miR-452 beg:35 end:57 pic:3' CAGAGTCAA-AGGAGACGTTTGT 5'& ||| ||| |||||||.| &5' ----CAGGCATCCCCTGCAAATA 3' Ube2m mmu-miR-504 beg:19 end:31 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& .|||||||. &5' ------------GCCAGGGTT- 3' Ube2m mmu-miR-546 beg:317 end:333 pic:3' CTGAGGCACGGTGGTA 5'& || || |||||| &5' -AC-CCACCCCACCA- 3' Ube2m mmu-miR-702 beg:64 end:87 pic:3' CTCGC-CCCATTTC-C-CACCCGT 5'& |.|| ||||||.| | ||||| &5' GGGCCCGGGTAAGGTGTGTGGG-- 3' Ube2m mmu-miR-705 beg:228 end:248 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||| |||| ||||||.|. &5' -GCCC-CCCC-CCTCCCGCT 3' Ube2m mmu-miR-705 beg:318 end:338 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& ||||||||||| ||||. &5' --CCCACCCCACCA-CCACT 3' Ube2m mmu-miR-709 beg:115 end:138 pic:3' AGGA-GGACGGA-GACGGAGG 5'& ||.| ||||.| ||||| || &5' TCTTCCCTGTCACCTGCC-CC 3' Ube2m mmu-miR-711 beg:107 end:132 pic:3' GAATGTAGAGAGGGGCCCAG-GG 5'& |||.| |||||.||| ||| || &5' CTTGCCTCTCTTCCCT-GTCACC 3' Ube2m mmu-miR-1938 beg:332 end:350 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& || |||. |.|||||||| &5' --CC--ACTGGAGGTCCCACC- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ube2m; Ubc-rs2; Ubc12 mmu-let-7a 167 187 UGAUAUGUUGG--AUGAUGGAGU ||: :| |:||:|||| ---UUAUGGUCGGUGCUGCCUCC Ube2m; Ubc-rs2; Ubc12 mmu-let-7b 157 187 UUGGUGUGUUGG--------AUGAUGGAGU |||||:::|:: |:||:|||| CACCACGUGAUUAUGGUCGGUGCUGCCUCC Ube2m; Ubc-rs2; Ubc12 mmu-let-7c 153 187 -UUGGU---------AUGUUGG--AUGAUGGAGU :|||| ||: :| |:||:|||| UGACCACCACGUGAUUAUGGUCGGUGCUGCCUCC Ube2m; Ubc-rs2; Ubc12 mmu-let-7f 167 187 UGAUAUGUUAG--AUGAUGGAGU ||: || |:||:|||| ---UUAUGGUCGGUGCUGCCUCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-124a 85 109 -CCGU---AAGUGGCGCACGGAAU- ||:| || :|| | ||||||: GGGUAGCCUUGGCC-CCUGCCUUGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-126-3p 161 181 CGUAAUAAUGAGUGCCAUGCU |:| ||||: ||||:| ACGUGAUUAUGGUCGGUGCU- Ube2m; Ubc-rs2; Ubc12 mmu-miR-129-3p 271 293 UAC-GAAAAACCCCAUU--CCCGAA || || |||||||| |||| UUGACUG--UGGGGUAAGUGGGCA- Ube2m; Ubc-rs2; Ubc12 mmu-miR-129-5p 26 56 -UCGU---UCGGGUCUGG------CGUUUUUC :|: :||||||:| ||||| GGGUUACCGGCCCAGGCAUCCCCUGCAAAU-- Ube2m; Ubc-rs2; Ubc12 mmu-miR-133a 65 94 UGUCGA--CCA----ACUU-CCCC--UGGUU :|| ||| || |||| :|| -GGGCCCGGGUAAGGUGUGUGGGGUAGCCU- Ube2m; Ubc-rs2; Ubc12 mmu-miR-133a* 22 38 UAAACCAAGGUAA-AAUGGUCG- ||| |||||:|| -------GCCAGGGUUACCGGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-133b 65 94 AUCGA--CCA----ACUU-CCCC--UGGUU :|| ||| || |||| :|| GGGCCCGGGUAAGGUGUGUGGGGUAGCCU- Ube2m; Ubc-rs2; Ubc12 mmu-miR-134 96 132 -GGGGA---GACCAGU-UGGU---------CAGUGU ||||| :||| | :|| ||||| GCCCCUGCCUUGGCCUUGCCUCUCUUCCCUGUCACC Ube2m; Ubc-rs2; Ubc12 mmu-miR-140* 242 282 AGGC-ACCAA-GAU-------GGG----------ACACCAU ||| ||| ||: ||| ||||| CCCGCUGGGUGCUGUCCAACUCCCCACUCUUGACUGUGGG- Ube2m; Ubc-rs2; Ubc12 mmu-miR-141 13 33 -GGUAGAAAUGGUCUGUCACAAU- ||||| |:||||: |||| CCCAUCCCUGCCAGG----GUUAC Ube2m; Ubc-rs2; Ubc12 mmu-miR-149 278 304 -CCUCACU--UCUGUGCCUCGGUCU- ||:|| :|:|| |:||| |: UGGGGUAAGUGGGCAAUGGGCCUGGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-15a 159 184 -GUGU-UUGGUA--AUACACGACGAU |||: :|::|| | ||||||| CCACGUGAUUAUGGUCGGUGCUGCC- Ube2m; Ubc-rs2; Ubc12 mmu-miR-15b 162 184 ACAUUUGGUACUA--CACGACGAU || :|::|||:| ||||||| CGU-GAUUAUGGUCGGUGCUGCC- Ube2m; Ubc-rs2; Ubc12 mmu-miR-16 161 184 -GCGGUUAUAAAUGC-ACGACGAU ||: | ||| || |||||| ACGUGAUUAUGGUCGGUGCUGCC- Ube2m; Ubc-rs2; Ubc12 mmu-miR-17-3p 244 282 AUG-UUCACGG-------------GAG---UGACGUCA :| ::||||: ||| ||||::| CGCUGGGUGCUGUCCAACUCCCCACUCUUGACUGUGGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-181d 343 372 UUGGGUGG-CUGUUG--UUA--CUUACAA- |||||| |:| || ||||||| -UCCCACCAGGCUAUUAAAGGGGAAUGUUA Ube2m; Ubc-rs2; Ubc12 mmu-miR-185 99 124 CUUGACGGAA---------AGAGAGGU ||||||| |||||:| --CCUGCCUUGGCCUUGCCUCUCUUCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-188 331 367 -UGG-GA-------GGUGGUACG------UUCCCUAC ||| || |||||| || |:|||| CACCACUGGAGGUCCCACCAGGCUAUUAAAGGGGAA- Ube2m; Ubc-rs2; Ubc12 mmu-miR-200a 23 42 UGUAGCAAUGGUCU-GUCACAAU || ||||||:| ||| CCAGGGUUACCGGCCCAGG---- Ube2m; Ubc-rs2; Ubc12 mmu-miR-204 348 367 -GUCCGUAUCCUACUGUUUCCCUU- ||||| :||||||:| CCAGGCUAU------UAAAGGGGAA Ube2m; Ubc-rs2; Ubc12 mmu-miR-207 62 93 -CUCCC---UCC---UCUCGGUCCUCUUCG- |:||| :|| :| |: ||:| ||| UGGGGGCCCGGGUAAGGUGUGUGGGGUAGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-214 99 116 -GACGGACAGACACGGA-CGACA |||||| || |||| || CCUGCCU---UG-GCCUUGCC-- Ube2m; Ubc-rs2; Ubc12 mmu-miR-24* 270 294 UGACU-AUAGUCGAGUCAUCCGUG :||| |:| :| | |||:|||| CUUGACUGUGGGGUAAGUGGGCAA Ube2m; Ubc-rs2; Ubc12 mmu-miR-25 268 297 -AGU-CUGG--CUCUGUUCA--CGUUAC- || |||: |:|::|||| |||||| CUCUUGACUGUGGGGUAAGUGGGCAAUGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-296 69 101 UGUCCUA-----ACUCCCCC------CCGGGA |:|| || |||| ||||| CCGGGUAAGGUGUGUGGGGUAGCCUUGGCCCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-298 76 106 -CCU----UCUUGUCGGGA--GGAGACGG- || :| :||||: || ||||| AGGUGUGUGGGGUAGCCUUGGCCCCUGCCU Ube2m; Ubc-rs2; Ubc12 mmu-miR-29a 153 183 -UUGG-------CUAAAGUCUA-CCACGAU- :||| |||| |:| ||||||: UGACCACCACGUGAUUAU-GGUCGGUGCUGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-29c 163 183 UGGCUAAAGUUUA-CCACGAU- :|||| ::| ||||||: -GUGAUUAU-GGUCGGUGCUGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-300 83 105 CUUCUC-UCGAA--CGGGAACGUAU :|:| ||| |||| ||| -UGGGGUAGCCUUGGCCCCUGCC-- Ube2m; Ubc-rs2; Ubc12 mmu-miR-31 94 118 GUCGAU-ACGG--UCGUAGAACGGA- :|| |||| :|| ||||||| UGGCCCCUGCCUUGGC--CUUGCCUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-323 62 85 UCUCCAGCUGGCACAU--UACACG- |:|| ||| ||| :||||: UGGGGGC--CCGGGUAAGGUGUGUG Ube2m; Ubc-rs2; Ubc12 mmu-miR-324-5p 345 377 -GUGGUUACGGGA---UCCCCU-------ACGC |||||: ||: |||||| ||| CCACCAG-GCUAUUAAAGGGGAAUGUUACUGCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-328 279 303 UGCCUU----CCCGUCUCUCCCGGUC- ||: ||||| ||||| | -GGGGUAAGUGGGCAAU--GGGCCUGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-329 244 258 UUUUUCCAAUCGACCCAC-ACAA |||||||| ||| ---------CGCUGGGUGCUGUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-330 60 90 AGAGACGUCCGGG--------ACACGAAACG- :|| :||||| ||||: |: --AUUGGGGGCCCGGGUAAGGUGUGUGGGGUA Ube2m; Ubc-rs2; Ubc12 mmu-miR-331 286 314 AAGAUCC--UAUCCGGGUCC------CCG- |:|| ||:||||::|| ||| --GUGGGCAAUGGGCCUGGGUCGCUAGGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-342 69 89 CUGCCCACGCUAAAGACACACUCU- ||||| |: ||||||:|: -CCGGGUAAGG----UGUGUGGGGU Ube2m; Ubc-rs2; Ubc12 mmu-miR-344 284 308 UGUCAGUCCGAAA-CC-GAUCUAGU- ||| :||| || ||:|:||: -AAGU-GGGCAAUGGGCCUGGGUCGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-345 265 294 CGUGAC--CUGAU-CCCCAG----UCGU- |||| ||||: ||||| :||| CCACUCUUGACUGUGGGGUAAGUGGGCAA Ube2m; Ubc-rs2; Ubc12 mmu-miR-34b 1 26 GUUAGUCGAUUAAUGU-----GACGGAU ::|:||| |||||| ||||| -GGUUAGC-AAUUACCCAUCCCUGCCA- Ube2m; Ubc-rs2; Ubc12 mmu-miR-370 21 44 UUGGUCCAA--GGUGGGGUCGUCCG- :||||| ||: |||| ||| UGCCAGGGUUACCGGCCCA---GGCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-424 155 184 AGGUUUUGUACUUA--------ACGACGAC ||| ||:||| |||||| ACCACCACGUGAUUAUGGUCGGUGCUGCC- Ube2m; Ubc-rs2; Ubc12 mmu-miR-433-5p 20 36 CUUAUUACUGUCCGAGUGGCAU || |||| |:|||| -----CUGCCAGGGUUACCGG- Ube2m; Ubc-rs2; Ubc12 mmu-miR-449b 1 26 GGUCGAUCGUUAC---GU---GACGGA :|:||||||| || ||||| --GGUUAGCAAUUACCCAUCCCUGCCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-452 37 58 CAGAGUCAA-AGGAGACGUUUGU- ||| ||| |||||||:| ---CCAGGCAUCCCCUGCAAAUAU Ube2m; Ubc-rs2; Ubc12 mmu-miR-465-3p 54 76 AGAUGAAUC-UUUCCGGGACUAG ||:||| :::||||| |:| -AUAUUUAUUGGGGGCCCGGGUA Ube2m; Ubc-rs2; Ubc12 mmu-miR-483 61 87 UGUUCUGCCCUC---CCC--UCCU--CACU- :|||:| ||| ||| |||: -----UUGGGGGCCCGGGUAAGGUGUGUGGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-484 276 304 -UAGCCC--UC-CCCUG-ACUCGGACU- :| ||| || ||| ||:|||||: UGUGGGGUAAGUGGGCAAUGGGCCUGGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-490 330 354 -GUCGU-ACCU-CAGGA-GGUCCAAC || || |||| |||| ||||| CCACCACUGGAGGUCCCACCAGGC-- Ube2m; Ubc-rs2; Ubc12 mmu-miR-491 238 271 -GGAGUACCUUCCCA----------AGGGGUGA- |||| | |||| |||||||| CCCUCCCGCU-GGGUGCUGUCCAACUCCCCACUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-497 160 184 AUGU-UUGGUGUCA--CACGACGAC ||: :|::|::|| ||||||| CACGUGAUUAUGGUCGGUGCUGCC- Ube2m; Ubc-rs2; Ubc12 mmu-miR-500 64 85 GACUUGGGAACGGGUCCACGUA- |::||| |: |||||::| -GGGGCCCGGGUA-AGGUGUGUG Ube2m; Ubc-rs2; Ubc12 mmu-miR-503 173 201 CGUCAUGACA-AGGGC------GACGAU |:||:||| |||| ||||| UCGGUGCUGCCUCCCCCCCGACCUGCUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-542-3p 123 132 AAAGUCAAUAGUUAGACAGUGU ||||||| -------------CCUGUCACC Ube2m; Ubc-rs2; Ubc12 mmu-miR-543 337 372 -UCUUCAC-GUGG------------CGCUUACAAA :||:|| |||| | ||||||| UGGAGGUCCCACCAGGCUAUUAAAGGGGAAUGUUA Ube2m; Ubc-rs2; Ubc12 mmu-miR-551b 273 308 GUGAC-UUUGGUUCAU-----------ACCCAGC- |||| ::: :||||: ||||||| GACUGUGGGGUAAGUGGGCAAUGGGCCUGGGUCGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-615 62 80 UUCUCCCUCUGGGUCCGAGCCU ||:|:|||:||: || ----UGGGGGCCCGGGUAAGGU Ube2m; Ubc-rs2; Ubc12 mmu-miR-665 83 104 AUUCCC--UGGAGUCGGAGGACCA :||| :|||::||| |||| -UGGGGUAGCCUUGGCC-CCUGC- Ube2m; Ubc-rs2; Ubc12 mmu-miR-668 280 309 -CCAU-CACCCGG--CUCGG-CUCACUGU |||| |||||| |:||| |:|| :| GGGUAAGUGGGCAAUGGGCCUGGGUCGCU Ube2m; Ubc-rs2; Ubc12 mmu-miR-671 231 260 -GGAGGUCGGGGAGGU---CCCGA---AGGA || || ||||||| |||: ||| GCC-CCC-CCCCUCCCGCUGGGUGCUGUCCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-674 228 255 AUGUGGU-----GAGGGUAGAGUCACG- :|:|| |||||: || :|||| AGCGCCCCCCCCCUCCCG-CUGGGUGCU Ube2m; Ubc-rs2; Ubc12 mmu-miR-675-5p 293 317 UGACACCCGGGAAAGGCGU----GGU- ||||||: :||| ||| ---AUGGGCCUGGGUCGCUAGGCCCAA Ube2m; Ubc-rs2; Ubc12 mmu-miR-676 196 212 UCGAGUUGUUGGAGUCCUGCC |||||:|:|: :||| UGCUCAGCGAU---GGGAA-- Ube2m; Ubc-rs2; Ubc12 mmu-miR-676* 64 90 CGUUCAGG---AUUCCA-ACAUCUCA- ::| || |||||| |||:|:|| -GGGGCCCGGGUAAGGUGUGUGGGGUA Ube2m; Ubc-rs2; Ubc12 mmu-miR-682 259 282 GUCUGAA--GUGAC-ACUGACGUC- ||| |||| ||||||::| --AACUCCCCACUCUUGACUGUGGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-688 279 305 -CUUAUUCAUCAG-----CGGACGCU | |||||:| ||||| | GGGGUAAGUGGGCAAUGGGCCUGGGU Ube2m; Ubc-rs2; Ubc12 mmu-miR-689 64 93 -CCUGGGG-----CGGCUCGCCCC--UGC ||:||| | :| |:|||| :| GGGGCCCGGGUAAGGUGUGUGGGGUAGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-700 285 306 CCACCUGA-GCCAAGGGCGCAC ||||:| :|| ||:| || AGUGGGCAAUGGG-CCUGGGUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-702 276 300 CUCGCCCCAUUU-CCC---ACCCGU |:|||||||: ||| ||||| -UGUGGGGUAAGUGGGCAAUGGGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-705 320 351 ACGGGUGGGGUGG-----------AGGGUGG- ||||||||||| ||||||| -ACCCACCCCACCACCACUGGAGGUCCCACCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-709 96 120 AGGAGGACGGAG-----ACGGAGG- || |||||||: ||||||: GCC-CCUGCCUUGGCCUUGCCUCUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-742 195 225 AAAUGGGUCG-UACC---------ACCGAAAG |:|:|||| |||| |||||| -CUGCUCAGCGAUGGGAAAUGAAUUGGCUUG- Ube2m; Ubc-rs2; Ubc12 mmu-miR-744 82 105 CGACA--AUCGGGAUCGGGG-CGU || |||||:|:||||| || -GUGGGGUAGCCUUGGCCCCUGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-761 78 105 -ACACAGUCAAAGUGGGAC----GACG- ||||| :| :||:|| |||| GUGUGUGGGGUA-GCCUUGGCCCCUGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-762 116 139 CGAGACAGGGCCGG-GGUCGGGG- |||| |||| |:| || ||||| UCUCU-UCCCUGUCACCUGCCCCU Ube2m; Ubc-rs2; Ubc12 mmu-miR-763 332 356 CGGUGACCAAGAAGGG----UCGACC ||||||| |||| :||| ACCACUGGAGG-UCCCACCAGGCUA- Ube2m; Ubc-rs2; Ubc12 mmu-miR-764-3p 85 103 UGUCAACGGUGAUACCGGAGGA- :|| ||| ||||| ||| -GGGUAGCCU---UGGCC-CCUG Ube2m; Ubc-rs2; Ubc12 mmu-miR-770-3p 295 317 GGUCGAGGUGCAG---UCCGGGUGC :|| |: ||| ||||||| -GGGC-CUGGGUCGCUAGGCCCAA- Ube2m; Ubc-rs2; Ubc12 mmu-miR-801 171 208 -CAGCUAAGGCGU------------GCGUGUCGUUAG ||||:| |:|| :|| ||||:|| GGUCGGUGCUGCCUCCCCCCCGACCUGCUCAGCGAUG Ube2m; Ubc-rs2; Ubc12 mmu-miR-802 358 376 -UUCCUACUUAGAAACAAUGACU ||||: ||| |||||||| AAAGGG-GAA----UGUUACUGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-296 64 71 U--------GUCCUAACUCC--------------CCCCCGGGA |||| |||||||| UUACCGGCCCAGGCAUCCCCUGCAAAUAUUUAUUGGGGGCCCG Ube2m; Ubc-rs2; Ubc12 mmu-miR-491 262 269 ------------GGAGUACCUUCCCA----------AGGGGUGA |||| |||| |||||||| UAGCGCCCCCCCCCUCCCGCU-GGGUGCUGUCCAACUCCCCACUC Ube2m; Ubc-rs2; Ubc12 mmu-miR-542-3p 124 131 AAAGUCAAUAGUUA---------------------GACAGUGU ||||||| AGCCUUGGCCCCUGCCUUGGCCUUGCCUCUCUUCCCUGUCACC Ube2m; Ubc-rs2; Ubc12 mmu-miR-543 364 371 ---------UCUUCAC-GUGG------------CGCUUACAAA :||:|| |||| | ||||||| ACCACCACUGGAGGUCCCACCAGGCUAUUAAAGGGGAAUGUUA Ube2m; Ubc-rs2; Ubc12 mmu-miR-690 88 95 AAA---------------------CCA-ACACUCGGAUCGGAAA ||| ||||:| ||||||| AAUAUUUAUUGGGGGCCCGGGUAAGGUGUGUGGGG-UAGCCUUG Ube2m; Ubc-rs2; Ubc12 mmu-miR-709 179 186 A-----------GGAGGA----------CGGA---GACGGAGG || || |:| |||||||| UUUUUUUUUUGACCACCACGUGAUUAUGGUCGGUGCUGCCUCCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-802 368 375 --------------------------UUCCUACUUAGAAACAAUGACU ||||: ||| |||||||| CCACUGGAGGUCCCACCAGGCUAUUAAAGGG-GAA----UGUUACUGC Ube2m; Ubc-rs2; Ubc12 mmu-let-7a 164 186 ugauAUGUUGG--AUGAUGGAGu ||::::| |:||:|||| tgatTATGGTCGGTGCTGCCTCc Ube2m; Ubc-rs2; Ubc12 mmu-let-7c 157 186 uUGGU------AUGUUGG--AUGAUGGAGu |||| ||::::| |:||:|||| cACCACGTGATTATGGTCGGTGCTGCCTCc Ube2m; Ubc-rs2; Ubc12 mmu-let-7f 164 186 ugauAUGUUAG--AUGAUGGAGu ||:::|| |:||:|||| tgatTATGGTCGGTGCTGCCTCc Ube2m; Ubc-rs2; Ubc12 mmu-miR-124a 89 107 cCGUAAGUGGCGCACGGAAu || || :|| | |||||| aGCCTTGGCC-CCTGCCTTg Ube2m; Ubc-rs2; Ubc12 mmu-miR-126-3p 161 181 cGUAAUAAUGAGUGCCAUGcu |:| ||||: ||||:| aCGTGATTATGGTCGGTGCtg Ube2m; Ubc-rs2; Ubc12 mmu-miR-129-3p 267 293 uacGAA---AAACCCCAUU--CCCGaa ||| | |||||||| |||| actCTTGACTGTGGGGTAAGTGGGCaa Ube2m; Ubc-rs2; Ubc12 mmu-miR-129-5p 30 57 ucGUUCGGGUCU------GGCGUUUUUc | :||||||: |:||||| | taCCGGCCCAGGCATCCCCTGCAAATAt Ube2m; Ubc-rs2; Ubc12 mmu-miR-133a 50 71 uGUCGACCAACUUCCCCUGGuu || | || ||||:|| gCAAATATTTATTGGGGGCCcg Ube2m; Ubc-rs2; Ubc12 mmu-miR-133a* 15 36 uaaaccAAGGU-AAAAUGGUCG | ||| |||||:|| catcccTGCCAGGGTTACCGGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-133b 51 71 aucgaccaacuuCCCCUGGuu ||||:|| caaatatttattGGGGGCCcg Ube2m; Ubc-rs2; Ubc12 mmu-miR-134 114 131 GGGGAGACCAGUUGGUCAGUGu ||:|||| || || ||||| CCTCTCT--TC--CCTGTCACc Ube2m; Ubc-rs2; Ubc12 mmu-miR-140* 261 282 aggcaccaAGAUGGGACACCau ||| |||||| ctccccacTCTTGACTGTGGgg Ube2m; Ubc-rs2; Ubc12 mmu-miR-141 14 31 GGUAGAAAUGGUCUGUCACAAU ||||| || | ||| |||| CCATC----CCTGCCAGGGTTA Ube2m; Ubc-rs2; Ubc12 mmu-miR-149 279 302 CCUCA--CUUCUGUGCCUCGGUCu ||:|| | :|:|| |:||| | GGGGTAAGTGGGCAATGGGCCTGg Ube2m; Ubc-rs2; Ubc12 mmu-miR-15a 160 184 GUGU-UUGGUAAUA--CACGACGau |||: :|::|| :| ||||||| CACGTGATTATGGTCGGTGCTGCct Ube2m; Ubc-rs2; Ubc12 mmu-miR-15b 162 184 aCAUUUGGUACUA--CACGACGau || :|::|||:| ||||||| cGT-GATTATGGTCGGTGCTGCct Ube2m; Ubc-rs2; Ubc12 mmu-miR-16 162 184 GCGGUUAUAAAUG-CACGACGau ||: | ||| | ||||||| CGTGATTATGGTCGGTGCTGCct Ube2m; Ubc-rs2; Ubc12 mmu-miR-17-3p 256 281 AUGUUCACGG--GAG---UGACGUCa | ||| | || ||| ||||::| TCCAACTCCCCACTCTTGACTGTGGg Ube2m; Ubc-rs2; Ubc12 mmu-miR-181d 342 370 uuGGGUGG-CUG----UUGUUACUUACAA |||||| |:| || :: ||||||| gtCCCACCAGGCTATTAAAGGGGAATGTT Ube2m; Ubc-rs2; Ubc12 mmu-miR-181d 319 344 UUGGGU-GGCU-GUUGUUACUUACAa |||||| || | || || ||:| || AACCCACCCCACCACCACTGGAGGTc Ube2m; Ubc-rs2; Ubc12 mmu-miR-185 103 123 cuugaCGGAA---AGAGAGGu ||||| |||||:| ccttgGCCTTGCCTCTCTTCc Ube2m; Ubc-rs2; Ubc12 mmu-miR-188 343 366 uGGGAGGU--GGUACGUUCCCuac ||| ||| |:|| ||||| tCCCACCAGGCTATTAAAGGGgaa Ube2m; Ubc-rs2; Ubc12 mmu-miR-200a 14 31 uGUAGCAAUGGUCUGUCACAAU |||| || | ||| |||| cCATC----CCTGCCAGGGTTA Ube2m; Ubc-rs2; Ubc12 mmu-miR-204 339 365 gUCC---GU-AUCCUACUGUUUCCCUU ||| || ||| | :||||||:| gAGGTCCCACCAGGCTATTAAAGGGGA Ube2m; Ubc-rs2; Ubc12 mmu-miR-207 69 91 cuCCC--UCCUCUCGGUCCUCUUCG ||| ||| | |: ||:| ||| ccGGGTAAGGTGTGT--GGGGTAGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-214 111 137 gACGGACA-----GACA-CGGACGaca ||||| | |||| ||||| tTGCCTCTCTTCCCTGTCACCTGCccc Ube2m; Ubc-rs2; Ubc12 mmu-miR-25 270 295 aguCUG--GCUCUGUU--CACGUUAC ||| :|:|::|| | |||||| cttGACTGTGGGGTAAGTGGGCAATG Ube2m; Ubc-rs2; Ubc12 mmu-miR-296 51 71 uguccUAACUCCCCCCCGGGa ||| | |||||||| caaatATTTATTGGGGGCCCg Ube2m; Ubc-rs2; Ubc12 mmu-miR-298 81 104 cCUUCUUGUCGGGA--GGAGACGG | :|:::||||:| || ||||| tGTGGGGTAGCCTTGGCCCCTGCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-29a 160 181 uUG-GCUAAAGUCUACCACGAu || :|||| ::| |||||| cACGTGATTATGGTCGGTGCTg Ube2m; Ubc-rs2; Ubc12 mmu-miR-29c 161 181 UG-GCUAAAGUUUACCACGAu || :|||| ::: |||||| ACGTGATTATGGTCGGTGCTg Ube2m; Ubc-rs2; Ubc12 mmu-miR-300 96 117 cuucucucGAACGGGAACGUAu |||| |||||| | gcccctgcCTTGGCCTTGCCTc Ube2m; Ubc-rs2; Ubc12 mmu-miR-31 95 116 gucgauACGG--UCGUAGAACGGA |||| :|| ||||||| ggccccTGCCTTGGC--CTTGCCT Ube2m; Ubc-rs2; Ubc12 mmu-miR-324-5p 346 370 GUGGUUACGGGA---UCCCC-UACgc |||||: ||: | ||||| ||| CACCAG-GCTATTAAAGGGGAATGtt Ube2m; Ubc-rs2; Ubc12 mmu-miR-328 293 316 UGCCU--UCCCGUCUCUCCCGGUc |:||: |||: | ||| ||| ATGGGCCTGGGTCGCTAGGCCCAa Ube2m; Ubc-rs2; Ubc12 mmu-miR-329 235 257 uuuuuccaauCGACCCAC-ACAa |||||||| ||| cccccctcccGCTGGGTGCTGTc Ube2m; Ubc-rs2; Ubc12 mmu-miR-330 87 108 agagacguCCGGGACACGAAACg ||||| ||| ||| gtagccttGGCCC-CTGCCTTGg Ube2m; Ubc-rs2; Ubc12 mmu-miR-331 284 305 aagAUCC--UAUCCGGGUCCCcg |:|| ||:|| || ||| aagTGGGCAATGGG-CCTGGGtc Ube2m; Ubc-rs2; Ubc12 mmu-miR-342 68 87 cuGCCCACGCUAAAGACACACUCu ||||| |: ||||||:| ccCGGGTAAGG----TGTGTGGGg Ube2m; Ubc-rs2; Ubc12 mmu-miR-344 283 306 ugUCAGUCCGAAACC--GAUCUAGu ||| :||| ||| ||:|:|| taAGT-GGGCAATGGGCCTGGGTCg Ube2m; Ubc-rs2; Ubc12 mmu-miR-345 290 308 CGUGACCUGAUCCCCAGUCGu ||| |||:| ||||| || GCAATGGGC-CTGGGTC-GCt Ube2m; Ubc-rs2; Ubc12 mmu-miR-34b 1 26 guuAGUCGAUUAAU-----GUGACGGau |:||| ||||| | ||||| -ggTTAGC-AATTACCCATCCCTGCCag Ube2m; Ubc-rs2; Ubc12 mmu-miR-424 155 184 aGGUUUUGUACU--UA------ACGACGac ||| ||:||| || |||||| aCCACCACGTGATTATGGTCGGTGCTGCct Ube2m; Ubc-rs2; Ubc12 mmu-miR-433-5p 15 36 cuuauuACUGUCCGAGUGGCau || |||| |:|||| catcccTGCCAGGGTTACCGgc Ube2m; Ubc-rs2; Ubc12 mmu-miR-452 34 56 CAGAGU-CAAAGGAGACGUUUGU | | || | ||| |||||||:| GGCCCAGGCATCCCCTGCAAATA Ube2m; Ubc-rs2; Ubc12 mmu-miR-465-3p 53 75 agAUGAAU-CUUUCCGGGACUAg ||:||| :::||||| |:| aaTATTTATTGGGGGCCCGGGTa Ube2m; Ubc-rs2; Ubc12 mmu-miR-483 56 83 uguucugCCCUC---CCC--UCCUCACu |||:| ||| ||| ||| atttattGGGGGCCCGGGTAAGGTGTGt Ube2m; Ubc-rs2; Ubc12 mmu-miR-484 277 302 uAGCCC--UCCCCUG--ACUCGGACu | ||| || ||:| ||:||||| gTGGGGTAAGTGGGCAATGGGCCTGg Ube2m; Ubc-rs2; Ubc12 mmu-miR-490 331 355 GUCGU-ACCU-CA-GGAGGUCCAAc || || |||| || || ||||| | CACCACTGGAGGTCCCACCAGGCTa Ube2m; Ubc-rs2; Ubc12 mmu-miR-491 239 269 GGAG---UACCUUC-CCA-----AGGGGUGA |||| |||: | || |||||||| CCTCCCGCTGGGTGCTGTCCAACTCCCCACT Ube2m; Ubc-rs2; Ubc12 mmu-miR-497 160 184 aUGU-UUGGUGUCA--CACGACGac ||: :|::|::|| ||||||| cACGTGATTATGGTCGGTGCTGCct Ube2m; Ubc-rs2; Ubc12 mmu-miR-500 63 83 gaCUUGGGAACGGGUCCACGUA |::||| | : |||||::| ggGGGCCC-GGGTAAGGTGTGT Ube2m; Ubc-rs2; Ubc12 mmu-miR-543 338 371 uCUUCA-CGUGG--CG----------CUUACAAa ||:|| |||| || ||||||| gGAGGTCCCACCAGGCTATTAAAGGGGAATGTTa Ube2m; Ubc-rs2; Ubc12 mmu-miR-551b 285 306 gugacuuugguucauACCCAGC ||||||| agtgggcaatgggccTGGGTCG Ube2m; Ubc-rs2; Ubc12 mmu-miR-615 52 73 uucucccucuggguCCGAGCCu ||| ||| aaatatttattgggGGCCCGGg Ube2m; Ubc-rs2; Ubc12 mmu-miR-665 83 104 AUUCCCU-GGAGUCGGAGGACca |::|| | |||::| | |||| TGGGGTAGCCTTGG-CCCCTGcc Ube2m; Ubc-rs2; Ubc12 mmu-miR-668 281 308 CCA-UCACCCG--GCUCGG-CUCACUGu ||| ||||||| :|:||| |:|| :| GGTAAGTGGGCAATGGGCCTGGGTCGCt Ube2m; Ubc-rs2; Ubc12 mmu-miR-671 232 259 GGAGGUCGGGGAGG----UCC-CGA-AGGa || || ||||||| :|| ||| ||| CCCCC--CCCCTCCCGCTGGGTGCTGTCCa Ube2m; Ubc-rs2; Ubc12 mmu-miR-674 233 253 auGUGGUGAGGGUAGAGUCACG | || |||||: || :|||| ccCCCCCCTCCCG-CTGGGTGC Ube2m; Ubc-rs2; Ubc12 mmu-miR-675-5p 313 332 ugacacccGGGAAAGGCGUGGU ||| || ||||| ccaagcaaCCC--ACCCCACCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-676 187 208 ucGAGUUGUUGGAGUC-CUGCC | |:|| ||||| ||:|| ccCCCGACCTGCTCAGCGATGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-676* 63 88 CGUUCAGG---AUUCCA-ACAUCUCA | ::| || |||||| |||:|:|| GGGGGCCCGGGTAAGGTGTGTGGGGT Ube2m; Ubc-rs2; Ubc12 mmu-miR-682 258 280 GUCUGA--AGUGA-CACUGACGUC || ||| |||| ||||||::| CA-ACTCCCCACTCTTGACTGTGG Ube2m; Ubc-rs2; Ubc12 mmu-miR-688 280 304 CUUAUUCAUCAG-----CGGACGCu |::|||||:| | ||||| | GGGTAAGTGGGCAATGGGCCTGGGt Ube2m; Ubc-rs2; Ubc12 mmu-miR-689 43 69 ccuGGGGCG------GCUCGCCCCUGc |||:|| : | :||||:| atcCCCTGCAAATATTTATTGGGGGCc Ube2m; Ubc-rs2; Ubc12 mmu-miR-690 74 95 aaaCCA-ACACUCGGAUCGGAAa ||| ||||:| ||||||| taaGGTGTGTGGG-GTAGCCTTg Ube2m; Ubc-rs2; Ubc12 mmu-miR-702 275 292 cuCGCCCCAUUUCCCACCCGU |:||||||| ||||||| ctGTGGGGTAA---GTGGGCA Ube2m; Ubc-rs2; Ubc12 mmu-miR-705 324 349 acGGGUGG-GGUG-----GAGGGUGG |||||| |||| ||||||| acCCCACCACCACTGGAGGTCCCACC Ube2m; Ubc-rs2; Ubc12 mmu-miR-705 310 326 aCGGGUGGGGUGGAGGGUGG ||||| | | |||||| gGCCCAAGCAA---CCCACC Ube2m; Ubc-rs2; Ubc12 mmu-miR-709 168 186 aggaggacggaGACGGAGG |||||||| tatggtcggtgCTGCCTCC Ube2m; Ubc-rs2; Ubc12 mmu-miR-709 118 138 AGGA-GGACGG-AGACGGAGg ||:| ||||:| ||||| | TCTTCCCTGTCACCTGCCCCt Ube2m; Ubc-rs2; Ubc12 mmu-miR-742 194 225 aaAUGGGUCG-UACC---------ACCGAAag |:|:|||| |||| |||||| ccTGCTCAGCGATGGGAAATGAATTGGCTTgt Ube2m; Ubc-rs2; Ubc12 mmu-miR-744 83 104 cgaCAAUCGGGAUCGGGG-CGu | |||||:|:||||| || tggGGTAGCCTTGGCCCCTGCc Ube2m; Ubc-rs2; Ubc12 mmu-miR-761 83 106 ACACAGUC--AAAGUGGGACGacg || | :|| || |||||| TGGGGTAGCCTTGGCCCCTGCctt Ube2m; Ubc-rs2; Ubc12 mmu-miR-764-3p 90 116 ugucAACGGUGAU---ACCGGA--GGA | ||| ||: |||||| ||| gcctTGGCCCCTGCCTTGGCCTTGCCT Ube2m; Ubc-rs2; Ubc12 mmu-miR-770-3p 298 317 GGUCGAGGUGCAGUCCGGGUgc || | :|:| :||||||| CCTGGGTCGC--TAGGCCCAag Ube2m; Ubc-rs2; Ubc12 mmu-miR-801 172 207 CAGCUAAGGCG----------UG--CGUGUCGUUAg ||||:| |:|| || || ||||:|| GTCGGTGCTGCCTCCCCCCCGACCTGCTCAGCGATg Ube2m; Ubc-rs2; Ubc12 mmu-miR-802 359 375 UUCCUACUUAGAAACAAUGACu ||||: ||| |||||||| AAGGG-GAA----TGTTACTGc Ube2m; Ubc-rs2; Ubc12 mmu-miR-804 245 266 aGGUCCACUCCUUGUUGAGUGu |::|||| | |||||| | gCTGGGTGCTGTCCAACTCCCc

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ube2m RAID00104713 mmu-miR-6912-5p miRNA MIMAT0027724 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00190080 mmu-miR-362-3p miRNA MIMAT0004684 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00212353 mmu-miR-125a-3p miRNA MIMAT0004528 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00252062 mmu-miR-323-5p miRNA MIMAT0004638 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00454460 mmu-miR-296-5p miRNA MIMAT0000374 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00809089 mmu-miR-6956-5p miRNA MIMAT0027812 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00878758 mmu-miR-7077-5p miRNA MIMAT0028060 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00879133 mmu-miR-7085-5p miRNA MIMAT0028076 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00880303 mmu-miR-6925-3p miRNA MIMAT0027751 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID00899696 mmu-miR-6939-5p miRNA MIMAT0027778 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01006024 mmu-miR-6769b-5p miRNA MIMAT0028040 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01105880 mmu-miR-329-3p miRNA MIMAT0000567 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01278210 mmu-miR-1938 miRNA MIMAT0009402 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01358541 mmu-miR-3065-3p miRNA MIMAT0014837 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01773939 mmu-miR-802-5p miRNA MIMAT0004188 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01776773 mmu-miR-6931-5p miRNA MIMAT0027762 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID01784133 mmu-miR-7076-5p miRNA MIMAT0028058 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID02154978 mmu-miR-542-3p miRNA MIMAT0003172 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID02351711 mmu-miR-7075-5p miRNA MIMAT0028056 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID02737549 mmu-miR-466l-3p miRNA MIMAT0005830 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID02869519 mmu-miR-6953-5p miRNA MIMAT0027806 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03031978 mmu-miR-709 miRNA MIMAT0003499 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03255882 mmu-miR-3102-5p miRNA MIMAT0014933 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03267809 mmu-miR-6979-5p miRNA MIMAT0027860 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03305102 mmu-miR-702-5p miRNA MIMAT0022931 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03311144 mmu-miR-7030-5p miRNA MIMAT0027964 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03358127 mmu-miR-7067-5p miRNA MIMAT0028038 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03433900 mmu-miR-6393 miRNA MIMAT0025143 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03450216 mmu-miR-6952-5p miRNA MIMAT0027804 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03742934 mmu-miR-6949-3p miRNA MIMAT0027799 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03774903 mmu-miR-7001-5p miRNA MIMAT0027904 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03778848 mmu-miR-543-3p miRNA MIMAT0003168 Ube2m mRNA 22192 Prediction 0.2381 Ube2m RAID03816000 mmu-miR-3472 miRNA MIMAT0015643 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03871704 mmu-miR-299a-3p miRNA MIMAT0004577 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID03909760 mmu-miR-346-3p miRNA MIMAT0017039 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID04000138 mmu-miR-491-5p miRNA MIMAT0003486 Ube2m mRNA 22192 Prediction 0.1828 Ube2m RAID04014052 mmu-miR-6418-5p miRNA MIMAT0025173 Ube2m mRNA 22192 Prediction 0.1828