SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs13464364 | snp | C/T | | | synonymous-codon, nc-transcript-variant | Pan2 | Mm_Celera | 10:128317752 | GCCACAGGTCGGGGA[C/T]CTGGTGGGCCTGGAT | 103135 |
rs29318900 | snp | A/C | 0.375 | 0.216506 | missense, nc-transcript-variant, downstream-variant-500B | Pan2 | Mm_Celera | 10:128315227 | TTGCAACTGGGCTGA[A/C]GAGCATGAGGTGCAG | 103135 |
rs29323920 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Pan2 | Mm_Celera | 10:128311426 | TATGTGTGTGAGAGT[A/G]TGTGAGTGCAAGAGT | 103135 |
rs29324009 | snp | C/T | 0.5 | 0 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128302844 | GAAAAGGTGGCCACT[C/T]GGGCCACACTAGAAG | 103135 |
rs29326100 | snp | C/T | 0.5 | 0 | intron-variant | Pan2 | Mm_Celera | 10:128304803 | GAGTTTCCTTGTATG[C/T]AACCATATCTGACTG | 103135 |
rs29326700 | snp | A/G | 0.375 | 0.216506 | intron-variant | Pan2 | Mm_Celera | 10:128313362 | CTCCCCTGGACCTTG[A/G]CCTCATCTACTGTGT | 103135 |
rs29335759 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Pan2 | GRCm38.p3 | 10:128311638 | TATGTGTGAGTGGTA[C/T]GTGCGAGTGTAGGCA | 103135 |
rs29337306 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Pan2 | Mm_Celera | 10:128314657 | AGGGAAGAACTCCAC[C/T]TTTACAGATCCTGTC | 103135 |
rs29337872 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Pan2 | Mm_Celera | 10:128317032 | GTGTGTAGAGACCAA[A/G]GGACAACTTTGTAAC | 103135 |
rs29342118 | snp | C/G | 0.5 | 0 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128303021 | CTGGGAATACCCACC[C/G]GGCGAGTCCCAGTGC | 103135 |
rs29348850 | snp | C/T | 0.444444 | 0.157135 | intron-variant, downstream-variant-500B | Pan2 | Mm_Celera | 10:128315281 | GAGGGACTGAGGGAG[C/T]GAAGGTGGGCGGAAG | 103135 |
rs29358584 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Pan2 | Mm_Celera | 10:128307168 | AGGGTCTCTGAGTTT[A/G]AAGCCAACCTAGTCT | 103135 |
rs29362051 | snp | C/T | 0.5 | 0 | synonymous-codon, intron-variant, utr-variant-5-prime, nc-transcript-variant | Pan2 | Mm_Celera | 10:128308070 | TCCTCCCCAGGGCCA[C/T]GCCACCTCCTTCTTC | 103135 |
rs29363996 | snp | A/G | 0.48 | 0.0979796 | intron-variant, downstream-variant-500B | Pan2 | Mm_Celera | 10:128316132 | GACATATATATATAT[A/G]TATTATTATTATGTA | 103135 |
rs29368042 | snp | C/T | 0.498615 | 0.0262793 | intron-variant | Pan2 | Mm_Celera | 10:128308562 | ATATGACTTCCCTGT[C/T]TCTTGGTCATGGGAA | 103135 |
rs29370085 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Pan2 | Mm_Celera | 10:128316192 | TATGTATAGCTGGGC[A/G]GTGGTGGCGCACGCC | 103135 |
rs29370517 | snp | A/G/T | 0.444444 | 0.157135 | upstream-variant-2KB | Pan2 | GRCm38.p3 | 10:128301593 | ACTATATTTTATTTT[A/G/T]TTTTTTTTTTTTTTT | 103135 |
rs29372078 | snp | A/G | 0.46281 | 0.131194 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128303325 | GATGGCTGCCAATCC[A/G]CCGTCCGTCTTGCTT | 103135 |
rs29377193 | snp | C/T | 0.5 | 0 | intron-variant | Pan2 | Mm_Celera | 10:128304755 | CTGATCTAGAACTCA[C/T]AGCAGTCCTCCTGCT | 103135 |
rs29377680 | snp | C/T | 0.5 | 0 | intron-variant | Pan2 | Mm_Celera | 10:128318503 | CCGGCTTTGAACTCA[C/T]AGAGGTTCGCCTGCC | 103135 |
rs29378392 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301729 | TGAGAGAGAGAAAAA[C/T]CACACACACACACAC | 103135 |
rs36275009 | snp | C/T | 0.244898 | 0.249948 | intron-variant, upstream-variant-2KB | Pan2, Cnpy2 | Mm_Celera | 10:128320589 | ACTCAGTGTTTCCAA[C/T]AGTCAGTGAGAGAGA | 103135 |
rs36275583 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128309437 | ACCGTCCACCAGACT[A/G]CCGTGCTTTCACCTA | 103135 |
rs36299902 | snp | A/C | 0.260355 | 0.249785 | intron-variant | Pan2 | Mm_Celera | 10:128307961 | CTGGTCCCTAGCCAT[A/C]CGCCTCTGTTGTCTA | 103135 |
rs36336619 | snp | A/G | 0.244898 | 0.249948 | synonymous-codon, nc-transcript-variant | Pan2 | Mm_Celera | 10:128308351 | GCTGGATGAAAACGA[A/G]GATATGCACAGCGTC | 103135 |
rs36346179 | snp | C/T | 0.244898 | 0.249948 | intron-variant, upstream-variant-2KB | Pan2, Cnpy2 | Mm_Celera | 10:128320713 | GCTCACCCTGGTCTC[C/T]GTGATTCTGTCTCCT | 103135 |
rs36352795 | snp | C/T | 0.244898 | 0.249948 | utr-variant-3-prime, upstream-variant-2KB, nc-transcript-variant | Pan2, Cnpy2 | Mm_Celera | 10:128321083 | AGTCTGCTAGAGAAC[C/T]GAAGTCCTGGACAGT | 103135 |
rs36358541 | snp | A/T | 0.152778 | 0.230321 | intron-variant | Pan2 | Mm_Celera | 10:128317335 | ATTGTATTACCAGGT[A/T]CAGTCTCCTTTTAAT | 103135 |
rs36374318 | snp | G/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128305576 | AATGTTTAATGAATG[G/T]TTTTGGATACCTATT | 103135 |
rs36406968 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128310083 | GCTCATTTGATTAAT[A/G]TGTCTCCTGACATTA | 103135 |
rs36418877 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128311207 | TGTAACATTACAACA[C/T]TTTACGCCTGTCTTA | 103135 |
rs36431442 | snp | C/T | 0.375 | 0.216506 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301479 | AAATCTAAGGACCAG[C/T]GAAGCCAGAGATCCT | 103135 |
rs36443885 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128310889 | TTTGGGATGTGTGTG[C/T]AGAATTCAAGAAGCT | 103135 |
rs36563649 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Pan2 | Mm_Celera | 10:128306063 | CACTTAAAAAAAAAA[A/G]GTATTTGGTGGTGGA | 103135 |
rs36572724 | snp | A/G | 0.244898 | 0.249948 | downstream-variant-500B, upstream-variant-2KB | Pan2, Cnpy2 | Mm_Celera | 10:128321396 | TTCTTTCTTTGATTT[A/G]ACTTCACCAAACAAT | 103135 |
rs36575642 | snp | C/T | 0.408163 | 0.193609 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301336 | AGTAACCGATTTACT[C/T]CAAGTATCTCAAGCT | 103135 |
rs36612693 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Pan2 | Mm_Celera | 10:128314590 | CTTCTTTGAGGACTC[A/G]TGCATGGTGGCCTGC | 103135 |
rs36615311 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128318867 | CTGGCTGACTACTCA[A/G]GGCATATATCTGAAT | 103135 |
rs36650750 | snp | C/T | 0.46875 | 0.121031 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128303263 | TGCCTGTACCTGGCT[C/T]TTTCTGATTGGCTGG | 103135 |
rs36695131 | snp | A/G | 0.46875 | 0.121031 | utr-variant-5-prime, nc-transcript-variant | Pan2 | Mm_Celera | 10:128304151 | AAGGCTGGGTCACTT[A/G]TCTGTAGGAAGCGTG | 103135 |
rs36712714 | snp | C/T | 0.489796 | 0.070696 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301905 | CAGTTGGTAGCAGTA[C/T]CCTTACCTGCTGTAC | 103135 |
rs36776898 | snp | C/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128311076 | GGCTAGAGCAGTTAA[C/G]ATAAGGGTATTGAAA | 103135 |
rs36784516 | snp | G/T | 0.260355 | 0.249785 | intron-variant | Pan2 | Mm_Celera | 10:128318389 | TTTGTTGTTGTTGTC[G/T]TCCTTTGTTTCTTGT | 103135 |
rs36789373 | snp | A/C | 0.277778 | 0.248452 | intron-variant | Pan2 | Mm_Celera | 10:128312457 | TAAAGATTTAAAAAT[A/C]AGAAAAATAAAAGAG | 103135 |
rs36813229 | snp | A/G | 0.244898 | 0.249948 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301858 | TGTGAAGACAACCAC[A/G]TTGAGTCTCAGGGAT | 103135 |
rs36847759 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128311181 | AGGTCTCAGGAAATA[C/T]GTGGTGACATTGTAA | 103135 |
rs36862080 | snp | C/G | 0.142012 | 0.225474 | missense, nc-transcript-variant | Pan2 | Mm_Celera | 10:128308364 | GAGGATATGCACAGC[C/G]TCCTCCTGACAGACA | 103135 |
rs36889290 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128313062 | ACGAGGGATTGAATG[C/T]GGTCCATAAAGTCTT | 103135 |
rs36897273 | snp | C/T | 0.197531 | 0.244432 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128303296 | TGAGCCCGTGGCCCC[C/T]GCTGATTGGAAGCGA | 103135 |
rs36907351 | snp | A/T | 0.142012 | 0.225474 | intron-variant | Pan2 | Mm_Celera | 10:128317562 | TATAGACGGAGAGCC[A/T]CTGAGCAGCCATCCT | 103135 |
rs36979028 | snp | A/G | 0.260355 | 0.249785 | intron-variant, upstream-variant-2KB | Pan2, Cnpy2 | Mm_Celera | 10:128320503 | TTGCTGGCATATGTC[A/G]AGCTTGTATACCACC | 103135 |
rs37032185 | snp | A/G | 0.21875 | 0.248039 | intron-variant | Pan2 | Mm_Celera | 10:128303904 | GCAGGGAACTTAGGA[A/G]GTTTAGAGGTGCAGA | 103135 |
rs37040208 | snp | A/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128311124 | CACGAGTGTGTAGTC[A/T]TGGAGGAGGAGGAAG | 103135 |
rs37059647 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Pan2 | Mm_Celera | 10:128308549 | TGTCGAGATGTGGAT[A/G]TGACTTCCCTGTTTC | 103135 |
rs37075233 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128318840 | CACCTTGCTGACCTC[A/G]GAGTTACTCTTCTGG | 103135 |
rs37099555 | snp | C/T | 0.244898 | 0.249948 | synonymous-codon, utr-variant-5-prime, nc-transcript-variant | Pan2 | Mm_Celera | 10:128308133 | GGTCAATGGTGGTGA[C/T]GACATTCGGCAAATC | 103135 |
rs37149521 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Pan2 | Mm_Celera | 10:128306125 | GTCAGCAGAATGAAG[C/T]GCACACAACAAAATT | 103135 |
rs37200792 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128310995 | AACCCATCAGAAATT[A/G]TGTATATCTTTTTGT | 103135 |
rs37211074 | snp | C/T | 0.244898 | 0.249948 | synonymous-codon, nc-transcript-variant | Pan2 | Mm_Celera | 10:128310220 | CAACCCAGCCGACAT[C/T]TTCCATGTGAATCCC | 103135 |
rs37247421 | snp | C/G | 0.197531 | 0.244432 | intron-variant | Pan2 | Mm_Celera | 10:128305546 | GAATGCACCACACCT[C/G]GTTTATAATTGCAGA | 103135 |
rs37387227 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Pan2 | Mm_Celera | 10:128308323 | CCCTGGCCTGTCGGC[C/T]CTTCTCACGCAGGCT | 103135 |
rs37425652 | snp | A/C/T | 0.408163 | 0.193609 | synonymous-codon, utr-variant-5-prime, nc-transcript-variant | Pan2 | GRCm38.p3 | 10:128304244 | GGATCCTGGACTGGC[A/C/T]GAATTTTCCCCAGCT | 103135 |
rs37516926 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128320169 | TTTCTAGGAGACTGC[A/G]TGGGAGTGTTGTGGG | 103135 |
rs37569225 | snp | A/C | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128307111 | TTATTTGCTGTAGAG[A/C]TTAAGATTTAAGCAA | 103135 |
rs37639811 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128317495 | GGCTGTAGACTTGGC[C/T]ACCCAGGTACACTCC | 103135 |
rs37912113 | snp | A/C | 0.375 | 0.216506 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128302463 | ACTAGTGGCACAGGG[A/C]CTTTAAAAACAGAGA | 103135 |
rs37916184 | snp | G/T | 0.244898 | 0.249948 | intron-variant, downstream-variant-500B | Pan2 | Mm_Celera | 10:128315012 | GGTGCATCTTAGAGT[G/T]GTCAGACGGTGGAGC | 103135 |
rs38044502 | snp | G/T | 0.244898 | 0.249948 | intron-variant, upstream-variant-2KB | Pan2, Cnpy2 | Mm_Celera | 10:128320676 | GCTCTTTCTGTATAG[G/T]GAGTGTCCTGGTGCC | 103135 |
rs38066570 | snp | A/T | 0.32 | 0.24 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301653 | GCAGAACATCCATAG[A/T]TGAAGTCCCGATGCA | 103135 |
rs38243240 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Pan2 | Mm_Celera | 10:128306438 | ACAGAATACAACAAT[C/T]CATGACCAAGGCTGG | 103135 |
rs38352383 | snp | A/T | 0.260355 | 0.249785 | intron-variant | Pan2 | Mm_Celera | 10:128314849 | ATGATTGGAAGCAGG[A/T]CTTCCCATGACTCCT | 103135 |
rs38395141 | snp | C/G | 0.375 | 0.216506 | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128301370 | TAACTCCCGTGGTCT[C/G]TGAGGTCTCTTTCAA | 103135 |
rs38690567 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128308840 | GTTTTCTACAGCTGG[A/G]TGCCTTGGAGGCAAA | 103135 |
rs38740127 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Pan2 | Mm_Celera | 10:128311781 | TACTTGTGTACAGTG[C/T]GATCTGTGTTGCTTT | 103135 |
rs38757116 | snp | G/T | 0.35503 | 0.226867 | downstream-variant-500B, upstream-variant-2KB | Pan2, Cnpy2 | Mm_Celera | 10:128321481 | CCCAGAATGAATGGA[G/T]CCAGGAGGAACATAG | 103135 |
rs46939695 | snp | A/G | | | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128302009 | GGGTCTCACTGTCTA[A/G]CCTTGGTCGGCCTAG | 103135 |
rs48629446 | snp | C/T | | | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128302017 | CTGTCTAACCTTGGT[C/T]GGCCTAGAATTCACT | 103135 |
rs49089310 | snp | A/G | | | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128303277 | TTTTTCTGATTGGCT[A/G]GGATGAGCCCGTGGC | 103135 |
rs49644804 | snp | G/T | | | intron-variant | Pan2 | Mm_Celera | 10:128304928 | AGGATCGTCTTGAAT[G/T]TCTGATCCTCCTGCC | 103135 |
rs50997062 | snp | A/G | | | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128302035 | CCTAGAATTCACTAC[A/G]TAGACCAAGCTGTCC | 103135 |
rs51162793 | snp | G/T | | | intron-variant | Pan2 | Mm_Celera | 10:128305021 | AAACCCCGAGGCTTT[G/T]TGCACAGCAGGCAAG | 103135 |
rs51174057 | snp | C/G | | | intron-variant | Pan2 | Mm_Celera | 10:128310540 | CTGCTGGGTGGAGGG[C/G]TCGTGGGGGGAGAGA | 103135 |
rs51501355 | snp | C/T | | | intron-variant | Pan2 | Mm_Celera | 10:128303807 | GAGCTCTCCCCCGAA[C/T]TCCAGCCCCTATCAA | 103135 |
rs51793654 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128305158 | GGAACTCACTTTGTA[A/G]ACCAGGCTGGCCTTG | 103135 |
rs52080545 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128311287 | TACAAGAGTATATGA[A/G]AGTGTATGTGTGAGT | 103135 |
rs52500884 | snp | G/T | | | intron-variant | Pan2 | Mm_Celera | 10:128305123 | GAGATAGGGTTTCTC[G/T]GTGTAGCCCTGGCTG | 103135 |
rs108002443 | snp | C/T | | | intron-variant | Pan2 | Mm_Celera | 10:128303751 | CCCTTCACCGCCCAG[C/T]CCCTTTGTCTCATGT | 103135 |
rs211830061 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128316529 | TCTGAATAGTAAGTG[A/G]CACGGAGTGGCCCAA | 103135 |
rs211837322 | snp | A/C | | | intron-variant | Pan2 | Mm_Celera | 10:128319333 | GGTGCGTCTGAAGAG[A/C]GAGACAGTGTTTTAC | 103135 |
rs211909376 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128307998 | AAGGGAGTCTGAGGC[A/G]TACTCCATCCTTGGC | 103135 |
rs211947082 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128307346 | GCGTACAAAGCATTC[A/G]CCAGACCACCCTGGA | 103135 |
rs211954153 | snp | G/T | | | synonymous-codon, nc-transcript-variant | Pan2 | Mm_Celera | 10:128320264 | CCTGAAGATTCAAGG[G/T]GAGACCCATGACAGC | 103135 |
rs212113226 | in-del | -/G | | | intron-variant | Pan2 | Mm_Celera | 10:128307039 | TGATGTGCCAGAGCA[-/G]GGGCGGTGTCTCAGT | 103135 |
rs212120320 | snp | G/T | | | intron-variant | Pan2 | Mm_Celera | 10:128305125 | GATAGGGTTTCTCTG[G/T]GTAGCCCTGGCTGTC | 103135 |
rs212164232 | snp | A/G | | | synonymous-codon, nc-transcript-variant | Pan2 | Mm_Celera | 10:128316478 | AGTACCTGCTATCCT[A/G]TATTATGTCAAAAGG | 103135 |
rs212363656 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128320036 | caaccgctcacaacc[A/G]tgtgtaacctcagtt | 103135 |
rs212574858 | snp | G/T | | | intron-variant | Pan2 | Mm_Celera | 10:128311043 | TTAGGAGCACTCTGT[G/T]CCAGAGCTTTCCAGA | 103135 |
rs213056244 | snp | A/C | | | upstream-variant-2KB | Pan2 | Mm_Celera | 10:128302183 | TATAGAAGAAGCTAA[A/C]CTTGAACACTAATCC | 103135 |
rs213206035 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128307741 | cttccagcctctctg[A/G]cacacacacacacac | 103135 |
rs213255916 | snp | A/G | | | intron-variant | Pan2 | Mm_Celera | 10:128309419 | CTGTTGGAGAAGGAA[A/G]TAACCGTCCACCAGA | 103135 |