DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Usp19; Kiaa0891 ATTTA 285-4367 4610-4614

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004522 mmu-miR-27b* 71472 Usp19 caAGUGGUUAGUCGAUUCGAga | | :||| | |||||| aaUAAAUAAU-AAAUAAGCUga 3 21 342 362 [mm9:9:108404629-108404649:+] 0.7377 130 0 -7.20 -0.8152 MIMAT0004529 mmu-miR-125b* 71472 Usp19 uccagggUUCUUGGACUGAAca || || ||||||| aauaauaAAUAAGCUGACUUa- 3 16 346 366 [mm9:9:108404633-108404653:+] 0.6482 139 0 -9.74 -0.4052 MIMAT0000137 mmu-miR-126-5p 71472 Usp19 gcgcAUGGUU-UUCAUUAUUac || || || |||||| auuuUAAAAAUAAAUAAUAAau 3 18 334 355 [mm9:9:108404621-108404642:+] 0.7377 132 0 -1.70 -0.5309 MIMAT0000137 mmu-miR-126-5p 71472 Usp19 gcGCAUGGUUUUCAUUAUUAc | | |||| | ||||| ugCAUUACAAACAUUAUAAUu 2 20 256 276 [mm9:9:108404543-108404563:+] 0.7377 123 0 -4.84 -0.1511 MIMAT0000137 mmu-miR-126-5p 71472 Usp19 gcGCAUGGUUUUC---AUUAUUac :|||:: |||| |||||| ccUGUAUUUAAAGUGUUAAUAAaa 3 20 238 261 [mm9:9:108403990-108404013:+] 0.6526 138 0 -10.65 -0.2184 MIMAT0000154 mmu-miR-142-5p 71472 Usp19 ucaucacgAAAGAUGAAAUAc || : |:||||| uacaaacaUUAUAAUUUUAUu 2 14 261 281 [mm9:9:108404548-108404568:+] 0.7377 129 0 -5.61 -0.1099 MIMAT0004575 mmu-miR-295* 71472 Usp19 cuucacacgggGUG-UAAACUCa ||: ||||||| auuuggggggaCAUGAUUUGAGg 2 12 109 131 [mm9:9:108404396-108404418:+] 0.6665 142 7 -12.82 -0.2613 MIMAT0000375 mmu-miR-297a 71472 Usp19 uguACGUGUACGU-GUGUAUGUa || || |||| :||| ||| uucUG-ACCUGCAUUACAAACAu 2 20 248 269 [mm9:9:108404535-108404556:+] 0.7377 128 0 -12.52 -0.1996 MIMAT0000378 mmu-miR-300 71472 Usp19 cuucucucgaacGGGAACGUAu :::|||||| aaaaauuguaauUUUUUGCAUu 2 11 284 305 [mm9:9:108404571-108404592:+] 0.7377 126 6 -8.17 -0.2362 MIMAT0004579 mmu-miR-302a* 71472 Usp19 cgUUCA-UGUUGGUG-CAAAUUca |||| || :|::| |||||| ggAAGUGACUGCUGCUGUUUAAau 3 21 308 331 [mm9:9:108404595-108404618:+] 0.7377 142 0 -11.79 -0.3512 MIMAT0004628 mmu-miR-21* 71472 Usp19 cugucggguaGCUGACGACAAc | :|||||||| uuggaagugaCUGCUGCUGUUu 2 13 306 327 [mm9:9:108404593-108404614:+] 0.7377 148 7 -16.75 -1.2225 MIMAT0004628 mmu-miR-21* 71472 Usp19 cuGUCG--GGUAG-C-UGACG-ACAAc |||| || || | :|||| |||| ucCAGCUGCCUUCAGUGCUGCGUGUUu 2 21 196 222 [mm9:9:108404483-108404509:+] 0.7092 121 0 -16.72 -0.7023 MIMAT0004631 mmu-miR-29a* 71472 Usp19 gacUUGUGGUU-UUCUUUAGUCa || |: || || |||| || uuaAAAAUAAAUAAUAAAUAAGc 2 20 337 359 [mm9:9:108404624-108404646:+] 0.7377 126 0 -5.48 -0.1569 MIMAT0000578 mmu-miR-337-3p 71472 Usp19 uccgUAGUAUAUCCUCGACUu || ||| | |||||| auaaAUAAUAAAUAAGCUGAc 2 18 343 363 [mm9:9:108404630-108404650:+] 0.7377 129 6 -6.76 -0.7555 MIMAT0000650 mmu-miR-17* 71472 Usp19 gauguucacgggagUGACGUCa ||||||| ggagacuuguggggACUGCAGu 2 9 115 136 [mm9:9:108403867-108403888:+] 0.6162 140 7 -16.66 -0.1264 MIMAT0004666 mmu-miR-33* 71472 Usp19 cacuACGUGACACCUUUGUAAc ||||: | ||||||| gaccUGCAU--UACAAACAUUa 2 19 252 271 [mm9:9:108404539-108404558:+] 0.7377 147 7 -8.74 -1.3163 MIMAT0000672 mmu-miR-199b* 71472 Usp19 cuuGUCCAUCAGAUU--UGUGACCc | | | || :| ||||||| cuuCUGUCACUCAGAGGACACUGGc 2 21 71 95 [mm9:9:108404358-108404382:+] 0.6360 143 7 -17.10 -0.4112 MIMAT0001090 mmu-miR-409-3p 71472 Usp19 uccccaaguggcucgUUGUAAg |||||| cugaccugcauuacaAACAUUa 2 8 250 271 [mm9:9:108404537-108404558:+] 0.7377 120 6 -7.08 -0.6420 MIMAT0002105 mmu-miR-464 71472 Usp19 auagagugucuUAUUUGAACCAu :| |||||||| ugugaccucuuGUUAACUUGGUc 2 13 149 171 [mm9:9:108404436-108404458:+] 0.6736 148 7 -12.69 -0.6555 MIMAT0002106 mmu-miR-465a-5p 71472 Usp19 agUGUA--GUCACGGUAAGAUUUau |||| :| | ::|||||||| aaACAUUAUAAUUUUAUUCUAAAaa 3 22 264 288 [mm9:9:108404551-108404575:+] 0.7377 144 0 -11.68 -0.7141 MIMAT0002106 mmu-miR-465a-5p 71472 Usp19 agUGUAGUCACGGU-A-AGAUUUAu | :| | |||:: | |:||||| ggAAGUGACUGCUGCUGUUUAAAUa 2 22 308 332 [mm9:9:108404595-108404619:+] 0.7377 135 0 -8.46 -0.1517 MIMAT0004759 mmu-miR-466a-5p 71472 Usp19 auACAUGUACAU-GUGUGUGUAu || || || | :||| |||| ucUG-ACCUGCAUUACAAACAUu 2 21 249 270 [mm9:9:108404536-108404557:+] 0.7377 125 0 -9.40 -0.2481 MIMAT0002107 mmu-miR-466a-3p 71472 Usp19 agaAUACACACGCACAUACAUAu |: | | |||||||||| cucUGAGCCUCAGUGUAUGUAUc 2 21 87 109 [mm9:9:108403839-108403861:+] 0.6162 156 7 -13.94 -0.1817 MIMAT0004760 mmu-miR-470* 71472 Usp19 agaaGAGUC-UUUCCAU-GACCAa ||||| : | ||| ||||| gagcCUCAGUGUAUGUAUCUGGUg 2 19 91 114 [mm9:9:108403843-108403866:+] 0.6162 125 0 -16.30 -0.3900 MIMAT0004781 mmu-miR-532-3p 71472 Usp19 acguucggaacccaCACCCUCc ||||||| aguguauguaucugGUGGGAGa 2 9 98 119 [mm9:9:108403850-108403871:+] 0.6162 140 7 -16.66 -0.7589 MIMAT0004786 mmu-miR-540-5p 71472 Usp19 ugucucagucucccACUGGGAAc |||||||| ucguccuguuucucUGACCCUUg 2 10 185 207 [mm9:9:108403937-108403959:+] 0.6326 145 7 -16.68 -0.5854 MIMAT0003167 mmu-miR-540-3p 71472 Usp19 gguccuagcuGGAGACUGGa ::||||||| ccuucaauucUUUCUGACCu 2 11 237 256 [mm9:9:108404524-108404543:+] 0.7377 142 7 -15.75 -1.2709 MIMAT0003167 mmu-miR-540-3p 71472 Usp19 gguccuagcuGGAGACUGGa :|||||||| ucguccuguuUCUCUGACCc 2 11 185 204 [mm9:9:108403937-108403956:+] 0.6326 146 7 -17.55 -0.5094 MIMAT0004788 mmu-miR-20b* 71472 Usp19 gaUCUUCACGAGUGUGACGUCa ||| ||: : ||||||| ggAGACUUGUGGGGACUGCAGu 2 21 115 136 [mm9:9:108403867-108403888:+] 0.6162 152 7 -18.49 -0.1264 MIMAT0003373 mmu-miR-302b* 71472 Usp19 ucUUUCGU-AAGGGUA-CAAUUUCa :|| :| ||||::| |||||| ugGAACUAUUUCCUGUAUUUAAAGu 2 22 227 251 [mm9:9:108403979-108404003:+] 0.6526 131 6 -15.94 -0.1548 MIMAT0003375 mmu-miR-302c* 71472 Usp19 cguccauugggguacAAUUUCg |||||| aacuauuuccuguauUUAAAGu 2 8 230 251 [mm9:9:108403982-108404003:+] 0.6526 120 6 -8.05 -0.1578 MIMAT0005460 mmu-miR-1224 71472 Usp19 gagguGGAGGGGUCAG-GAGUg ::||::| ||| |||| auuuuUUUCUUCUGUCACUCAg 2 17 63 84 [mm9:9:108404350-108404371:+] 0.6360 120 0 -17.21 -0.6205 MIMAT0003891 mmu-miR-770-3p 71472 Usp19 ggucgaggugcAGUCCGGGUgc ||||||||| aaaaugaguauUCAGGCCCAa- 3 12 258 278 [mm9:9:108404010-108404030:+] 0.6553 135 0 -19.08 -0.1451 MIMAT0014815 mmu-miR-3099* 71472 Usp19 guucccgaccuuccUUCGACc |||||| aauaaauaauaaauAAGCUGa 2 8 342 362 [mm9:9:108404629-108404649:+] 0.7377 120 6 -6.22 -0.8790 MIMAT0014816 mmu-miR-3099 71472 Usp19 agggGUUGGAGA---GAGA-UCGGAu ||| |||| |||| ||||| gaaaCAA-CUCUGGGCUCUGAGCCUc 2 19 73 97 [mm9:9:108403825-108403849:+] 0.5811 123 0 -19.17 -0.2330 MIMAT0003896 mmu-miR-763 71472 Usp19 cgguGACCAAGAAGGGUCGACc || | |||:||||||| aggcCUUGGCCUUUCCAGCUGc 2 19 183 204 [mm9:9:108404470-108404491:+] 0.6808 162 7 -28.50 -0.5511 MIMAT0003739 mmu-miR-673-5p 71472 Usp19 gagGUUCCUGGUCUCGACACUc ||:| ||| ||||||| cugCAGGCACC--UGCUGUGAg 2 20 7 26 [mm9:9:108403759-108403778:+] 0.5836 152 7 -26.11 -0.1192 MIMAT0003740 mmu-miR-674 71472 Usp19 auguggUGAGGGU-AGAGUCACg :|||: | ||||||| cucuggGCUCUGAGCCUCAGUGu 2 17 80 102 [mm9:9:108403832-108403854:+] 0.5811 147 7 -17.77 -0.3499 MIMAT0003449 mmu-miR-488* 71472 Usp19 aacucUCACGAUA-AUAGACCc |||| ||| ||||||| gccucAGUG-UAUGUAUCUGGu 2 17 93 113 [mm9:9:108403845-108403865:+] 0.6162 157 7 -14.95 -0.3291 MIMAT0003459 mmu-miR-682 71472 Usp19 gucuGAAGUGACACUGACGuc :|| : |||||||| gcauUUUGGAAGUGACUGCug 3 18 301 321 [mm9:9:108404588-108404608:+] 0.7377 133 0 -17.34 -0.2111 MIMAT0003459 mmu-miR-682 71472 Usp19 gucUGAAGUGACACU-GACGUc | ||| :| ||| ||||| uucAAUUCUUUCUGACCUGCAu 2 19 239 260 [mm9:9:108404526-108404547:+] 0.7377 126 0 -11.67 -1.2554 MIMAT0003459 mmu-miR-682 71472 Usp19 guCUGAAGUGACACUGACGUc ||||| :: | ||||||| gaGACUU-GUGGGGACUGCAg 2 20 116 135 [mm9:9:108403868-108403887:+] 0.6162 157 7 -23.40 -0.1121 MIMAT0004189 mmu-miR-693-3p 71472 Usp19 aaugucgguguagacuUUCGACg |||||| aaaauaaauaauaaauAAGCUGa 2 8 340 362 [mm9:9:108404627-108404649:+] 0.7377 120 6 -10.94 -0.8721 MIMAT0004826 mmu-miR-146b* 71472 Usp19 uggUCUUGACUCA-GGGAUCCCg :|::| |||| :||||||| gcaGGGGCAGAGUAUCCUAGGGu 2 20 141 163 [mm9:9:108403893-108403915:+] 0.6162 162 7 -27.18 -0.7460 MIMAT0004826 mmu-miR-146b* 71472 Usp19 ugGUCUUGACUCAGGGAUCCCg | || | || ||||||| cuCUGACCCUUGU-CCUAGGGc 2 21 196 216 [mm9:9:108403948-108403968:+] 0.6326 146 7 -22.17 -0.2512 MIMAT0003480 mmu-miR-297b-5p 71472 Usp19 uguacaaGUACGU-GUGUAUGUa | |||| :||| ||| uuucugaCCUGCAUUACAAACAu 2 16 247 269 [mm9:9:108404534-108404556:+] 0.7377 122 0 -11.11 -0.1996 MIMAT0004827 mmu-miR-297b-3p 71472 Usp19 auACCCAUACACACAUACAUAu || | | |||||||||| ucUGAGCCUCAGUGUAUGUAUc 2 21 88 109 [mm9:9:108403840-108403861:+] 0.6162 160 7 -12.97 -0.1800 MIMAT0003496 mmu-miR-706 71472 Usp19 aaaaaacucuguccCAAAGAGa ||||||| uugucugucguccuGUUUCUCu 2 9 178 199 [mm9:9:108403930-108403951:+] 0.6326 140 7 -9.93 -0.6878 MIMAT0003500 mmu-miR-710 71472 Usp19 gaguugagaggggUUCUGAACc :||||||| auguaucugguggGAGACUUGu 2 10 103 124 [mm9:9:108403855-108403876:+] 0.6162 141 7 -10.28 -0.1026 MIMAT0003504 mmu-miR-713 71472 Usp19 cgacacACGGAAGUCACGu |||||||||||| uccagcUGCCUUCAGUGCu 2 14 196 214 [mm9:9:108404483-108404501:+] 0.7092 165 7 -22.40 -0.4618 MIMAT0004850 mmu-miR-883b-5p 71472 Usp19 acUGACG-AUGGG-UAAGAGUCAu :|||| |:::: :|||||||| guGCUGCGUGUUUGGUUCUCAGUu 2 21 210 233 [mm9:9:108404497-108404520:+] 0.7377 158 7 -20.53 -1.0430 MIMAT0004863 mmu-miR-220 71472 Usp19 uucACAGACUGUGACACCACc || || | :||||||| ucaUGCCUACCUUUGUGGUGg 2 19 52 72 [mm9:9:108403804-108403824:+] 0.5460 154 7 -19.15 -0.1610 MIMAT0004864 mmu-miR-297a* 71472 Usp19 auACCCAUACACACAUACAUAu || | | |||||||||| ucUGAGCCUCAGUGUAUGUAUc 2 21 88 109 [mm9:9:108403840-108403861:+] 0.6162 160 7 -12.97 -0.1800 MIMAT0004865 mmu-miR-297c 71472 Usp19 uguACAUGUACGU-GUGUAUGUa || || |||| :||| ||| uucUG-ACCUGCAUUACAAACAu 2 20 248 269 [mm9:9:108404535-108404556:+] 0.7377 128 0 -12.52 -0.1996 MIMAT0004866 mmu-miR-297c* 71472 Usp19 auACCCAUACACACAUACAUAu || | | |||||||||| ucUGAGCCUCAGUGUAUGUAUc 2 21 88 109 [mm9:9:108403840-108403861:+] 0.6162 160 7 -12.97 -0.1800 MIMAT0004871 mmu-miR-465b-5p 71472 Usp19 gucUAGUCGU--GGUAAGAUUUau ||:| | ::|||||||| aacAUUAUAAUUUUAUUCUAAAaa 3 20 265 288 [mm9:9:108404552-108404575:+] 0.7377 134 0 -7.94 -0.7215 MIMAT0004871 mmu-miR-465b-5p 71472 Usp19 guCUAGUCGUGGUAAGAUUUAu || | || | |:||||| guGA-CUGCUGCUGUUUAAAUa 2 21 312 332 [mm9:9:108404599-108404619:+] 0.7377 130 0 -7.99 -0.1517 MIMAT0004873 mmu-miR-465c-5p 71472 Usp19 guCUAGUCGCGGUAAGAUUUAu || :: :||:: |:||||| guGACUGCUGCUG-UUUAAAUa 2 21 312 332 [mm9:9:108404599-108404619:+] 0.7377 134 0 -10.01 -0.1407 MIMAT0004873 mmu-miR-465c-5p 71472 Usp19 gucuaGUCGCGGUAAGAUUUau :| : ::|||||||| cauuaUAAUUUUAUUCUAAAaa 3 18 267 288 [mm9:9:108404554-108404575:+] 0.7377 133 0 -7.12 -0.7215 MIMAT0004875 mmu-miR-466b-5p 71472 Usp19 guACAUGUACAU-GUGUGUGUAg || || || | :||| |||| ucUG-ACCUGCAUUACAAACAUu 2 21 249 270 [mm9:9:108404536-108404557:+] 0.7377 125 0 -9.84 -0.2481 MIMAT0004876 mmu-miR-466b-3p 71472 Usp19 agaAUACACACGCACAUACAUAu |: | | |||||||||| cucUGAGCCUCAGUGUAUGUAUc 2 21 87 109 [mm9:9:108403839-108403861:+] 0.6162 156 7 -13.94 -0.1817 MIMAT0005453 mmu-miR-466b-3-3p 71472 Usp19 agaAUACACACGCACAUACAUAa |: | | |||||||||| cucUGAGCCUCAGUGUAUGUAUc 2 21 87 109 [mm9:9:108403839-108403861:+] 0.6162 156 7 -14.20 -0.1817 MIMAT0004877 mmu-miR-466c-5p 71472 Usp19 auACAUGUACGU-GUGUGUGUAg || || |||| :||| |||| ucUG-ACCUGCAUUACAAACAUu 2 21 249 270 [mm9:9:108404536-108404557:+] 0.7377 133 0 -12.74 -0.2459 MIMAT0004878 mmu-miR-466c-3p 71472 Usp19 agaAUACACACGCACAUACAUAu |: | | |||||||||| cucUGAGCCUCAGUGUAUGUAUc 2 21 87 109 [mm9:9:108403839-108403861:+] 0.6162 156 7 -13.94 -0.1817 MIMAT0004879 mmu-miR-466e-5p 71472 Usp19 auACAUGUACAU-GUGUGUGUAg || || || | :||| |||| ucUG-ACCUGCAUUACAAACAUu 2 21 249 270 [mm9:9:108404536-108404557:+] 0.7377 125 0 -9.84 -0.2481 MIMAT0004880 mmu-miR-466e-3p 71472 Usp19 agaAUACACACGCACAUACAUAu |: | | |||||||||| cucUGAGCCUCAGUGUAUGUAUc 2 21 87 109 [mm9:9:108403839-108403861:+] 0.6162 156 7 -13.94 -0.1817 MIMAT0004888 mmu-miR-493 71472 Usp19 ggACCGUGUGUCAUCCUGGAAGu |||: | |||| | |||||| uuUGGUUCUCAGUUGUACCUUCa 2 22 220 242 [mm9:9:108404507-108404529:+] 0.7377 145 6 -22.98 -0.2428 MIMAT0004931 mmu-miR-466d-3p 71472 Usp19 gauacacacgCACAUACAUAu |||||||||| cugagccucaGUGUAUGUAUc 2 12 89 109 [mm9:9:108403841-108403861:+] 0.6162 155 7 -13.27 -0.1817 MIMAT0004862 mmu-miR-877* 71472 Usp19 acccuccucccucuUCUCCUGu ||||||| uucuucugucacucAGAGGACa 2 9 69 90 [mm9:9:108404356-108404377:+] 0.6360 140 7 -13.32 -0.8555 MIMAT0005837 mmu-miR-1187 71472 Usp19 aaugugUGUAUGU-GUGUGUGUAu || |:|| :||| |||| uuucugACCUGCAUUACAAACAUu 2 18 247 270 [mm9:9:108404534-108404557:+] 0.7377 128 0 -11.54 -0.2503 MIMAT0005851 mmu-miR-1193 71472 Usp19 cuaucauuUUGCCCACUGGAu || ||||||| aaccucgcAAGUUGUGACCUc 2 14 137 157 [mm9:9:108404424-108404444:+] 0.6665 141 7 -10.36 -0.7687 MIMAT0005851 mmu-miR-1193 71472 Usp19 cuaucauuuugcccACUGGAu |||||| ccuucaauucuuucUGACCUg 2 8 237 257 [mm9:9:108404524-108404544:+] 0.7377 120 6 -9.25 -0.3967 MIMAT0005854 mmu-miR-467g 71472 Usp19 uauauacacaCACAUACAUAu |||||||||| cugagccucaGUGUAUGUAUc 2 12 89 109 [mm9:9:108403841-108403861:+] 0.6162 155 7 -12.97 -0.1800 MIMAT0007872 mmu-miR-1906 71472 Usp19 ucgggacggaguCCGACGACGu | ||||||| cauuuuggaaguGACUGCUGCu 2 11 302 323 [mm9:9:108404589-108404610:+] 0.7377 142 7 -15.78 -1.2825 MIMAT0007876 mmu-miR-1907 71472 Usp19 ugGAGGUC-UAGGAGACGACGAg :|:::| | : |||||||| caUUUUGGAAGUGACUGCUGCUg 2 21 302 324 [mm9:9:108404589-108404611:+] 0.7377 147 7 -16.41 -1.1985 MIMAT0009393 mmu-miR-1930 71472 Usp19 ugcgacguccaUGA-UACCUCCa :|| ||||||| -caggucccugGCUGAUGGAGGg 2 12 1 22 [mm9:9:108404288-108404309:+] 0.6480 142 7 -19.00 -0.8508 MIMAT0009400 mmu-miR-1936 71472 Usp19 cggucaagugucguccAGUCAAu |||||| gcugcguguuugguucUCAGUUg 2 8 212 234 [mm9:9:108404499-108404521:+] 0.7377 120 6 -10.78 -0.1087 MIMAT0009431 mmu-miR-1958 71472 Usp19 ugaaugacgaaggugAAAGGAu |||||| gcccugcuggaacuaUUUCCUg 2 8 220 241 [mm9:9:108403972-108403993:+] 0.6508 120 6 -17.10 -0.1156 MIMAT0009441 mmu-miR-1968 71472 Usp19 ucagGUGGUAGGAAUUGUCGACGu | ::: |||| ||||||| uaggCCUUGGCCUUUCCAGCUGCc 2 21 182 205 [mm9:9:108404469-108404492:+] 0.7092 156 7 -21.61 -0.3447 MIMAT0009445 mmu-miR-1274a 71472 Usp19 accgcggacuuguccCUGGACu |||||| ccuucaauucuuucuGACCUGc 2 8 237 258 [mm9:9:108404524-108404545:+] 0.7377 120 6 -11.50 -0.3897 MIMAT0009456 mmu-miR-1839-5p 71472 Usp19 guucuggacAAGAUAGA-UGGAa |||| ||| |||| uaccuucaaUUCUUUCUGACCUg 2 14 235 257 [mm9:9:108404522-108404544:+] 0.7377 121 0 -13.72 -1.2927 MIMAT0009461 mmu-miR-1982.2 71472 Usp19 gaCACCCUCUUGU---AUCCCACu | || |||::| ||||||| caGGGGCAGAGUAUCCUAGGGUGu 2 20 142 165 [mm9:9:108403894-108403917:+] 0.6162 154 7 -23.04 -0.2191 MIMAT0012774 mmu-miR-664 71472 Usp19 auccgaccccucaUUUACUUAu ||||||:| uaaaguguuaauaAAAUGAGUa 2 10 246 267 [mm9:9:108403998-108404019:+] 0.6553 129 0 -8.24 -0.2016 MIMAT0013803 mmu-miR-2861 71472 Usp19 ggcgggcggcGGUCCGGGg :||||||| aaaugaguauUCAGGCCCa 2 10 259 277 [mm9:9:108404011-108404029:+] 0.6553 141 7 -19.26 -1.3535 MIMAT0015640 mmu-miR-3470a 71472 Usp19 ggucGGACCAGAUGUUUCACu ||| || | :|||||| auuuCCU-GUAUUUAAAGUGu 2 18 234 253 [mm9:9:108403986-108404005:+] 0.6526 139 6 -14.37 -0.2269 MIMAT0015646 mmu-miR-3474 71472 Usp19 cuuAGGUGCAGAGGAG-GGUCCc | | :|||| ||| ||||| gccUACCUGUCUGCUCACCAGGu 2 20 30 52 [mm9:9:108403782-108403804:+] 0.5460 131 0 -25.87 -0.1811 MIMAT0000124 mmu-miR-15b 71472 Usp19 acauuuggUACUACACGACGAu :||| ||||||| uuuuggaaGUGA-CUGCUGCUg 2 15 304 324 [mm9:9:108404591-108404611:+] 0.7377 144 7 -15.21 -1.2001 MIMAT0000128 mmu-miR-30a 71472 Usp19 gaaggucagcucCUACAAAUgu | |||||| gaagugacugcuGCUGUUUAaa 3 11 309 330 [mm9:9:108404596-108404617:+] 0.7377 122 0 -6.12 -0.4079 MIMAT0000130 mmu-miR-30b 71472 Usp19 ucgACUCACAUCCUACAAAUgu ||| || | |||||| aagUGACUG-CUGCUGUUUAaa 3 20 310 330 [mm9:9:108404597-108404617:+] 0.7377 129 0 -7.57 -0.4048 MIMAT0004528 mmu-miR-125a-3p 71472 Usp19 ccgaggguucuugGAGUGGACa |||||||| ------------gCUCACCUGc 2 10 1 10 [mm9:9:108403753-108403762:+] 0.6211 145 7 -16.79 -0.2614 MIMAT0000153 mmu-miR-141 71472 Usp19 gguagaaauggucugUCACAAu |||||| auuuccuguauuuaaAGUGUUa 2 8 234 255 [mm9:9:108403986-108404007:+] 0.6526 120 6 -10.72 -0.5007 MIMAT0000158 mmu-miR-146a 71472 Usp19 uuggguAC-CUUAAGUCAAGAGu || | :||::|||||| cagugcUGCGUGUUUGGUUCUCa 2 17 208 230 [mm9:9:108404495-108404517:+] 0.7377 139 6 -16.15 -0.1582 MIMAT0000160 mmu-miR-150 71472 Usp19 gugaCCAUGUUCCCAACCCUCu || || :|| ||||||| uggaGGGACUGGGUUUGGGAGg 2 19 16 37 [mm9:9:108404303-108404324:+] 0.5732 162 7 -23.64 -0.2124 MIMAT0000165 mmu-miR-155 71472 Usp19 uggGGAUAGUGUUAAUCGUAAUu |||: ||: | | ||||| ugaCCUG-CAUUACAAACAUUAu 2 21 251 272 [mm9:9:108404538-108404559:+] 0.7377 122 0 -12.81 -0.1303 MIMAT0000215 mmu-miR-186 71472 Usp19 ucggguuuuccucUUAAGAAAc |||||||| caguuguaccuucAAUUCUUUc 2 10 229 250 [mm9:9:108404516-108404537:+] 0.7377 145 7 -6.30 -1.0519 MIMAT0000219 mmu-miR-24 71472 Usp19 gacaagGACGACUU--GACUCGGu || |||:: ||||||| aaacaaCU-CUGGGCUCUGAGCCu 2 17 74 96 [mm9:9:108403826-108403848:+] 0.5811 145 7 -19.54 -0.2920 MIMAT0000225 mmu-miR-195 71472 Usp19 cgguuauaaagacACGACGAu ||||||| uuuuggaagugacUGCUGCUg 2 9 304 324 [mm9:9:108404591-108404611:+] 0.7377 140 7 -12.11 -1.1985 MIMAT0000229 mmu-miR-199a-5p 71472 Usp19 cuuGUCCAUCAGACU--UGUGACCc | | | || || ||||||| cuuCUGUCACUCAGAGGACACUGGc 2 21 71 95 [mm9:9:108404358-108404382:+] 0.6360 147 7 -18.96 -0.4112 MIMAT0000248 mmu-miR-30e 71472 Usp19 gaaggucaguucCUACAAAUgu | |||||| gaagugacugcuGCUGUUUAaa 3 11 309 330 [mm9:9:108404596-108404617:+] 0.7377 122 0 -4.50 -0.4079 MIMAT0000513 mmu-miR-19b 71472 Usp19 agucaaAACGUACCUAAACGUGu |||:| ||||||: uaaaaaUUGUAAUUUUUUGCAUu 2 18 283 305 [mm9:9:108404570-108404592:+] 0.7377 133 0 -9.70 -0.1929 MIMAT0000514 mmu-miR-30c 71472 Usp19 cgACUCUCAC--AU-CCUACAAAUgu ||: |||| |: | |||||| uuUGGAAGUGACUGCUGCUGUUUAaa 3 22 305 330 [mm9:9:108404592-108404617:+] 0.7377 131 0 -10.79 -0.4048 MIMAT0000515 mmu-miR-30d 71472 Usp19 gaaggucagcccCUACAAAUgu | |||||| gaagugacugcuGCUGUUUAaa 3 11 309 330 [mm9:9:108404596-108404617:+] 0.7377 122 0 -5.97 -0.4048 MIMAT0000519 mmu-miR-200a 71472 Usp19 uguagcaauggucugUCACAAu |||||| auuuccuguauuuaaAGUGUUa 2 8 234 255 [mm9:9:108403986-108404007:+] 0.6526 120 6 -9.36 -0.5041 MIMAT0000526 mmu-miR-15a 71472 Usp19 guguuuggUAAUACACGACGAu | |: ||||||| auuuuggaAGUGACUGCUGCUg 2 15 303 324 [mm9:9:108404590-108404611:+] 0.7377 142 7 -13.08 -1.2001 MIMAT0000527 mmu-miR-16 71472 Usp19 gcGGUUAUAAAUGCACGACGAu :::: | | || ||||||| uuUUGGAAGUGAC-UGCUGCUg 2 21 304 324 [mm9:9:108404591-108404611:+] 0.7377 146 7 -15.09 -1.1856 MIMAT0000530 mmu-miR-21 71472 Usp19 agUUGUAGUCA--GACUAUUCGAu || || | | : ||||||| uaAAAAUAAAUAAUAAAUAAGCUg 2 21 338 361 [mm9:9:108404625-108404648:+] 0.7377 143 7 -8.26 -1.3206 MIMAT0000546 mmu-miR-103 71472 Usp19 aguaucgggacauguuACGACGa |||||| gcauuuuggaagugacUGCUGCu 2 8 301 323 [mm9:9:108404588-108404610:+] 0.7377 120 6 -14.30 -0.3677 MIMAT0000548 mmu-miR-322 71472 Usp19 agguUUUGUACUUAACGACGAc ::| :|| | ||||||| uuuuGGAAGUG-ACUGCUGCUg 2 19 304 324 [mm9:9:108404591-108404611:+] 0.7377 148 7 -16.89 -1.1969 MIMAT0000565 mmu-miR-328 71472 Usp19 ugCCUUCCCG----UCUCUCCCGGUc ||:||| | | ||||||||| uuGGGAGGUCCCCUACAGAGGGCCAu 2 21 30 55 [mm9:9:108404317-108404342:+] 0.5732 159 7 -27.63 -0.1513 MIMAT0000567 mmu-miR-329 71472 Usp19 uuUUUCCAAUCGACCCACACAa |:|| | : |||||||| gcAGAGUAUCCUAGGGUGUGUg 2 21 147 168 [mm9:9:108403899-108403920:+] 0.6162 152 7 -16.64 -0.3143 MIMAT0000647 mmu-miR-107 71472 Usp19 acuaucgggacauguuACGACGa |||||| gcauuuuggaagugacUGCUGCu 2 8 301 323 [mm9:9:108404588-108404610:+] 0.7377 120 6 -13.88 -0.3677 MIMAT0000651 mmu-miR-19a 71472 Usp19 agucaaAACGUAUCUAAACGUGu |||:| ||||||: uaaaaaUUGUAAUUUUUUGCAUu 2 18 283 305 [mm9:9:108404570-108404592:+] 0.7377 133 0 -9.70 -0.1929 MIMAT0000661 mmu-miR-214 71472 Usp19 ugacGGACAGACACGGACGACa ::|| ||| |||||| gcauUUUGGAAGUGACUGCUGc 2 19 301 322 [mm9:9:108404588-108404609:+] 0.7377 126 6 -16.48 -0.2512 MIMAT0000661 mmu-miR-214 71472 Usp19 ugacGGACAGACACGGACGACa |||| | ||||||| cucaCCUGCAGGCACCUGCUGu 2 19 2 23 [mm9:9:108403754-108403775:+] 0.5836 150 7 -21.65 -0.2725 MIMAT0000661 mmu-miR-214 71472 Usp19 ugacggaCAGACACGGACGACa | :|| ||||||| uccuaggGCUUGGCCCUGCUGg 2 16 208 229 [mm9:9:108403960-108403981:+] 0.6508 147 7 -18.91 -0.1284 MIMAT0000665 mmu-miR-223 71472 Usp19 accccAUAAACUGUUUGACUGu || | |:||:||||| auaaaUAAUAAAUAAGCUGACu 2 18 343 364 [mm9:9:108404630-108404651:+] 0.7377 141 0 -12.07 -0.2656 MIMAT0000671 mmu-miR-224 71472 Usp19 uugccuuggugaUCACUGAau ||||||| uugcauuuuggaAGUGACUgc 3 10 299 319 [mm9:9:108404586-108404606:+] 0.7377 125 0 -11.49 -0.2089 MIMAT0000671 mmu-miR-224 71472 Usp19 uugccuuggugaucACUGAAu |||||| aauaauaaauaagcUGACUUa 2 8 346 366 [mm9:9:108404633-108404653:+] 0.6482 120 6 -9.76 -0.7167 MIMAT0004684 mmu-miR-362-3p 71472 Usp19 acuUAGGAACUUGUCCACACAa ||||| | ||||||| aguAUCCUAG----GGUGUGUg 2 20 151 168 [mm9:9:108403903-108403920:+] 0.6162 146 7 -17.62 -0.2969 MIMAT0004745 mmu-miR-384-5p 71472 Usp19 ugUAACGGAUCCUUAACAAAUgu | || || | : |||||| gaAGUGACU-GCUGCUGUUUAaa 3 22 309 330 [mm9:9:108404596-108404617:+] 0.7377 127 0 -5.80 -0.4079 MIMAT0003172 mmu-miR-542-3p 71472 Usp19 aaagucAAUAGUUAGACAGUGu || |: |||||||| gacauuUUUUUCUUCUGUCACu 2 17 60 81 [mm9:9:108404347-108404368:+] 0.6360 152 7 -13.71 -1.0355 MIMAT0003188 mmu-miR-503 71472 Usp19 gacgucaugaCAAGGGCGACGAu || |:|||||| cauuuuggaaGUGACUGCUGCUg 2 14 302 324 [mm9:9:108404589-108404611:+] 0.7377 133 6 -19.65 -0.4441 MIMAT0003727 mmu-miR-374 71472 Usp19 gugaaucguccaacaUAAUAUa |||||| accugcauuacaaacAUUAUAa 2 8 253 274 [mm9:9:108404540-108404561:+] 0.7377 120 6 -2.54 -0.8635 MIMAT0003893 mmu-miR-761 71472 Usp19 acacagucaaaguggGACGACg |||||| gcauuuuggaagugaCUGCUGc 2 8 301 322 [mm9:9:108404588-108404609:+] 0.7377 120 6 -17.25 -0.2512 MIMAT0003893 mmu-miR-761 71472 Usp19 acacagUCAAAGUGGGACGACg :| || :|||||||| uccuagGGCUUGGCCCUGCUGg 2 17 208 229 [mm9:9:108403960-108403981:+] 0.6508 156 7 -20.27 -0.1284 MIMAT0003893 mmu-miR-761 71472 Usp19 acacAGUCAAAGU--G-GGACGACg ||| | || | ||||||| --gcUCACCUGCAGGCACCUGCUGu 2 19 1 23 [mm9:9:108403753-108403775:+] 0.5836 144 7 -20.34 -0.2725 MIMAT0003453 mmu-miR-497 71472 Usp19 auguuuggugUCAC--ACGACGAc |||| ||||||| gcauuuuggaAGUGACUGCUGCUg 2 13 301 324 [mm9:9:108404588-108404611:+] 0.7377 147 7 -19.45 -1.2017 MIMAT0003475 mmu-miR-146b 71472 Usp19 ucggauAC-CUUAAGUCAAGAGu || | :||::|||||| cagugcUGCGUGUUUGGUUCUCa 2 17 208 230 [mm9:9:108404495-108404517:+] 0.7377 139 6 -16.78 -0.1582 MIMAT0003486 mmu-miR-491 71472 Usp19 ggaguACCUUCCCAAGGGG-UGa |||:||| ||||| || ggguuUGGGAGG--UCCCCUACa 2 18 26 46 [mm9:9:108404313-108404333:+] 0.5732 122 0 -20.31 -0.1878 MIMAT0004895 mmu-miR-590-5p 71472 Usp19 gacgugaaAAUACUUAUUCGAg | || |||||||| aaaauaaaUAAUAAAUAAGCUg 2 15 340 361 [mm9:9:108404627-108404648:+] 0.7377 154 7 -7.17 -1.3206 MIMAT0004896 mmu-miR-590-3p 71472 Usp19 ugaUCGAAUAUGUAUUUUAAu | :|||| | |||||| auaAUUUUAUUCUAAAAAUUg 2 19 271 291 [mm9:9:108404558-108404578:+] 0.7377 130 6 -4.35 -0.4719 MIMAT0004896 mmu-miR-590-3p 71472 Usp19 ugAUCGAAUAUGUAUUUUAau || |:| ||||||| uuUAAAGUGUUAAUAAAAUga 3 20 244 264 [mm9:9:108403996-108404016:+] 0.6553 131 0 -3.66 -0.3105 MIMAT0004936 mmu-miR-873 71472 Usp19 uccucugaguguucAAGGACg |||||| ccugcuggaacuauUUCCUGu 2 8 222 242 [mm9:9:108403974-108403994:+] 0.6508 120 6 -12.47 -0.1556

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G067708 Usp19 Mus musculus 71472 19536157 0 0 R54779; MOUSE$USP19_02; Binding factors: mmu-miR-125a-5p , mmu-miR-125b-5p , mmu-miR-339-5p , mmu-miR-351-5p , mmu-miR-670-3p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Usp19 mmu-miR-2861 beg:262 end:277 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |. .||||||| &5' ------GTATTCAGGCCC- 3' Usp19 mmu-miR-146bstar beg:147 end:164 pic:3' TGGTCTTGACTCA-GGGATCCCG 5'& |||| .|||||||. &5' ---------GAGTATCCTAGGGT 3' Usp19 mmu-miR-214 beg:4 end:24 pic:3' TGACGGACAGACACGGACGACA 5'& |||| | |||||||| &5' ----CCTGCAGGCACCTGCTGT 3' Usp19 mmu-miR-761 beg:5 end:24 pic:3' ACACAGTCAAAGTGGGACGACG 5'& || ||| || |||||||. &5' --TG-CAGG--CA-CCTGCTGT 3' Usp19 mmu-miR-761 beg:211 end:229 pic:3' ACACAGTCAAAGTGGGACGACG 5'& .| || .|||||||| &5' ------GGCTTGGCCCTGCTG- 3' Usp19 mmu-miR-214 beg:212 end:229 pic:3' TGACGGACAGACACGGACGACA 5'& ||.|| ||||||| &5' ---GCTTGGC----CCTGCTG- 3' Usp19 mghv-miR-M1-3 beg:0 end:9 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& |||||||| &5' -------------GCTCACCT- 3' Usp19 mmu-miR-674 beg:83 end:103 pic:3' ATGTGGTGAGGGTA-GAGTCACG 5'& .|||. | |||||||. &5' ------GCTCTGAGCCTCAGTGT 3' Usp19 mmu-miR-540-5p beg:189 end:208 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& ||. ||||||||| &5' -----GTTTCTC--TGACCCTTG 3' Usp19 mmu-miR-362-3p beg:149 end:168 pic:3' ACTTAGGAACTTGTCCACACAA 5'& | ||||| .||||||| &5' -GTATCCTA----GGGTGTGT- 3' Usp19 mmu-miR-329 beg:157 end:168 pic:3' TTTTTCCAATCGACCCACACAA 5'& |||||||| &5' -------------GGGTGTGT- 3' Usp19 mmu-miR-145 beg:213 end:231 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& |.||| .||||| &5' -------CTTGGCCCTGCTGGA- 3' Usp19 mmu-miR-146bstar beg:195 end:217 pic:3' TGGTCTTGACTCA----GGGATCCCG 5'& |||| .|||||||| &5' -------CTGACCCTTGTCCTAGGGC 3' Usp19 mmu-miR-152 beg:171 end:193 pic:3' GGTTCA-AGACAGTACGTGACT 5'& |||. ||||||.| | ||| &5' CCAGTTGTCTGTCGT-C-CTG- 3' Usp19 mmu-miR-188-3p beg:6 end:25 pic:3' ACGTTTG-GGACGTACACCCTC 5'& |||..| ||||| |||| &5' -GCAGGCACCTGC-TGTG---- 3' Usp19 mmu-miR-188-3p beg:53 end:75 pic:3' ACGTTTGG-GACGTACACCCTC 5'& ||| ||| .||.. |||||| &5' TGCCTACCTTTGTG-GTGGGA- 3' Usp19 mmu-miR-188-3p beg:128 end:151 pic:3' ACGTTTGGGACGTACACCC-TC 5'& |||. |.||||| ||| || &5' -GCAGTCTCTGCAG--GGGCAG 3' Usp19 mmu-miR-1897-5p beg:229 end:251 pic:3' GGGGGAGAAA-GAGGTAGGTTTC 5'& || ||| || .||..|||| &5' ----CTATTTCCTGTATTTAAAG 3' Usp19 mmu-miR-192 beg:33 end:55 pic:3' CCGACAGTTAAGTA-TCCAGTC 5'& ||||| ||| |||||| &5' --CTGTCTGCTCACCAGGTCA- 3' Usp19 mmu-miR-1954 beg:122 end:145 pic:3' TTGTCCCAGA-GT--GAGACGTCA 5'& . ||| || || |||||||| &5' -GTGGGGACTGCAGTCTCTGCAG- 3' Usp19 mmu-miR-200c beg:229 end:256 pic:3' AGGTAGTAATGGGCCG-----TCATAAT 5'& |.||. ||.| |||.||| &5' -CTATTT---CCTGTATTTAAAGTGTTA 3' Usp19 mmu-miR-20bstar beg:119 end:137 pic:3' GATCTTCACGAGTGTGACGTCA 5'& ||. . |||||||| &5' -------TGTGGGGACTGCAGT 3' Usp19 mmu-miR-2145 beg:206 end:228 pic:3' TTGG--TCCGGGCTGGGACGA 5'& || .|||..|.||||||| &5' --CCTAGGGCTTGGCCCTGCT 3' Usp19 mmu-miR-27bstar beg:74 end:91 pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& ||| | ||..||||| &5' ------CAA-CT-CTGGGCTCT 3' Usp19 mmu-miR-297astar beg:96 end:108 pic:3' ATACCCATACACACATACATAT 5'& |||||||||| &5' -----------GTGTATGTAT- 3' Usp19 mmu-miR-297b-3p beg:96 end:108 pic:3' ATACCCATACACACATACATAT 5'& |||||||||| &5' -----------GTGTATGTAT- 3' Usp19 mmu-miR-297cstar beg:96 end:108 pic:3' ATACCCATACACACATACATAT 5'& |||||||||| &5' -----------GTGTATGTAT- 3' Usp19 mmu-miR-338-3p beg:221 end:231 pic:3' GTTGTTTTAGTGACTACGACCT 5'& ||||||| &5' ---------------TGCTGGA 3' Usp19 mmu-miR-466a-3p beg:96 end:109 pic:3' AGAATACACACGCACATACATAT 5'& |||||||||| &5' ------------GTGTATGTAT- 3' Usp19 mmu-miR-466b-3p beg:96 end:109 pic:3' AGAATACACACGCACATACATAT 5'& |||||||||| &5' ------------GTGTATGTAT- 3' Usp19 mmu-miR-466c-3p beg:96 end:109 pic:3' AGAATACACACGCACATACATAT 5'& |||||||||| &5' ------------GTGTATGTAT- 3' Usp19 mmu-miR-466d-3p beg:96 end:109 pic:3' GATACACACGCACATACATAT 5'& |||||||||| &5' ----------GTGTATGTAT- 3' Usp19 mmu-miR-466e-3p beg:96 end:108 pic:3' AGAATACACACGCACATACATAT 5'& |||||||||| &5' ------------GTGTATGTAT- 3' Usp19 mmu-miR-467g beg:96 end:108 pic:3' TATATACACACACATACATAT 5'& |||||||||| &5' ----------GTGTATGTAT- 3' Usp19 mmu-miR-532-3p beg:98 end:119 pic:3' ACGTTCGGAACCCACACCCTCC 5'& ||.| |. ||||||| &5' TGTATGTATCTG--GTGGGAG- 3' Usp19 mmu-miR-540-3p beg:181 end:204 pic:3' GGTCCTAGCTGG------AGACTGGA 5'& .||| || ||||||| &5' -----GTCGTCCTGTTTCTCTGACC- 3' Usp19 mmu-miR-669j beg:90 end:108 pic:3' ACAAACGTACACTCATATACGT 5'& || |||.||||.| &5' -----GCCTC--AGTGTATGTA 3' Usp19 mmu-miR-673-5p beg:4 end:26 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || ||.| ||| |||||||| &5' CTGCAGGCACCT--GCTGTGAG 3' Usp19 mmu-miR-682 beg:114 end:136 pic:3' GTCTGAAGTGACACTGACGTC 5'& |||||| | |||||||| &5' -AGACTTGTGGG-GACTGCAG 3' Usp19 mmu-miR-684 beg:60 end:78 pic:3' AACTGAACTTC-CCTTTTGA 5'& .||| .| ||.|||| &5' ----TTTGTGGTGGGAAAC- 3' Usp19 mmu-miR-710 beg:105 end:123 pic:3' GAGTTGAGAGGGG-TTCTGAACC 5'& ||| .||||||| &5' ------TCTGGTGGGAGACTTG- 3' Usp19 mmu-miR-713 beg:83 end:104 pic:3' CGACACACGGAAGTCACGT 5'& ||| || ||| ||||||.| &5' GCTCTGAGCC-TCAGTGTA 3' Usp19 mmu-miR-879 beg:77 end:98 pic:3' CCGAATCTCGATATTCGGAGA 5'& || |.||| |.|||||| &5' --CTCTGGGCTCTGAGCCTC- 3' Usp19 mmu-miR-881star beg:177 end:201 pic:3' TCTACACTGACA-----ATAGAGAGAC 5'& || |||| |.|.|||||| &5' -----TGTCTGTCGTCCTGTTTCTCTG 3' Usp19 mmu-miR-1982.2 beg:147 end:165 pic:3' GACACCCTCTT-GTATCCCACT 5'& ||| | ||||||| &5' ------GAGTATCCTAGGGTG- 3' Usp19 mmu-miR-488star beg:95 end:113 pic:3' AACTCTCACGATAATAGACCC 5'& ||||. ||||||| &5' -----AGTGTATGTATCTGG- 3' Usp19 mmu-miR-466b-3-3p beg:96 end:108 pic:3' AGAATACACACGCACATACATAA 5'& |||||||||| &5' ------------GTGTATGTAT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Usp19; Kiaa0891 mmu-let-7d 18 39 -UGAUACGUUGGAU-GAUGGAGA :||:|| |:|: |||||| UGCUGUG-AGCUGGCCUACCUG- Usp19; Kiaa0891 mmu-let-7e 18 39 -UGAUAUGUUGGA-GGAUGGAGU :||:|: |:|: ||||||| UGCUGUG-AGCUGGCCUACCUG- Usp19; Kiaa0891 mmu-let-7g 18 39 -UGACAUGUUUGAU--GAUGGAGU :|||| :|:||: |||||| UGCUGU--GAGCUGGCCUACCUG- Usp19; Kiaa0891 mmu-miR-101a 174 195 GAAGUCAAUAGUGU-CAUGACAU |||||:|| || |||| --CCAGUUGUCUGUCGUCCUGUU Usp19; Kiaa0891 mmu-miR-101b 174 195 GAAGUCGAUAGUGU-CAUGACAU |||:|:|| || |||| --CCAGUUGUCUGUCGUCCUGUU Usp19; Kiaa0891 mmu-miR-10a 118 148 GUGUUUAAGCCU--------AGAUGUCCCAU || :| ||| |||:||||| GACUUGUGGGGACUGCAGUCUCUGCAGGGG- Usp19; Kiaa0891 mmu-miR-10b 131 148 UGUGUUUAAGCCAAGAUGUCCC- :||: || |||:||||| -UGCAG--UC---UCUGCAGGGG Usp19; Kiaa0891 mmu-miR-125a 140 164 GUGUCCAA-UUUCCCAGAGUCCCU :|||| |:|| || :|||| UGCAGGGGCAGAGUAUCCUAGGGU Usp19; Kiaa0891 mmu-miR-125b 113 149 AGUGUUCA----AUCCC---------AGA-GUCCCU- : :|| |:||| ||| |||||: -UGGGAGACUUGUGGGGACUGCAGUCUCUGCAGGGGC Usp19; Kiaa0891 mmu-miR-133a 105 133 UGUCGACCAA-CUU------CCCCUGGUU :| ||||| ||: ||||||: GUAUCUGGUGGGAGACUUGUGGGGACUG- Usp19; Kiaa0891 mmu-miR-133b 108 133 AUCGACCAA-CUU------CCCCUGGUU ||||| ||: ||||||: --UCUGGUGGGAGACUUGUGGGGACUG- Usp19; Kiaa0891 mmu-miR-134 34 57 -GGGGAGACCAGUUGGUC-AGUGU ||: |||| || ||||| |||: ACCUGUCUGCUC-ACCAGGUCAUG Usp19; Kiaa0891 mmu-miR-140* 46 73 AGGCACCAA----GAUGG-GACACCAU- || ||| ||||| :||||||: ACCA-GGUCAUGCCUACCUUUGUGGUGG Usp19; Kiaa0891 mmu-miR-149 114 153 -CCU-----CACUUCUG----------UGCCUCGGUCU- ||| ||| ||| :| |:| |||| GGGAGACUUGUGGGGACUGCAGUCUCUGCAGGGGCAGAG Usp19; Kiaa0891 mmu-miR-150 108 131 GUGACCAUGUUCCCAAC-CCUCU- |||||: :|| ||| ||:|| -UCUGGUGGGAGACUUGUGGGGAC Usp19; Kiaa0891 mmu-miR-151 86 105 GGAGUUCCUCGGAGUCAGAUC ||| |||||||||| || GCUCU--GAGCCUCAGUGUAU Usp19; Kiaa0891 mmu-miR-18 36 66 -AUAGACG--UGAUCU---ACG--UGGAAU |:||||| || ||: ||| ||||| CUGUCUGCUCACCAGGUCAUGCCUACCUUU Usp19; Kiaa0891 mmu-miR-185 126 145 -CUUGACGGAAAGAGAGGU- |:||||| ||||| || GGGACUGCAG-UCUCUGCAG Usp19; Kiaa0891 mmu-miR-199b 67 88 CUUGUCCAUCAGAUUUGU---GACCC- |||:| ||||| ||||| ----UGGUGGG--AAACAACUCUGGGC Usp19; Kiaa0891 mmu-miR-212 110 134 -CCGGCA-CUG---ACCUCUGACAAU ||: | ||| |||:||||| UGGUGGGAGACUUGUGGGGACUGC-- Usp19; Kiaa0891 mmu-miR-214 178 196 GACGGACAGACACGGACGACA ||:||||| || ||||:| UUGUCUGUC-GU-CCUGUUU- Usp19; Kiaa0891 mmu-miR-215 35 57 CAGACAGUUUAGUA-UCCAGUA- ||||| ||| ||||||| -CCUGUCUGCUCACCAGGUCAUG Usp19; Kiaa0891 mmu-miR-22 131 152 -UGUCA-AGAAGUUGACCGUCGAA :|||| ||| ||: ||||| UGCAGUCUCUGCAGG-GGCAGA-- Usp19; Kiaa0891 mmu-miR-222 83 108 CUCUGGGUCAUCGGUC-UACAU-CGA :|:|:| |||| :|||| |: UGGGCUCUG-AGCCUCAGUGUAUGUA Usp19; Kiaa0891 mmu-miR-24 15 34 GACAAGGACG--ACUUGACUCGGU ||||| |||:||| ||| ----ACCUGCUGUGAGCUG-GCCU Usp19; Kiaa0891 mmu-miR-28 9 35 GAGUUAUC---UGACACUCGA--GGAA ||: :||||||||| ||| -GCAGGCACCUGCUGUGAGCUGGCCUA Usp19; Kiaa0891 mmu-miR-293 128 150 UGUGAUGUUUGAGACG-CCGUGA |||:||: |||||| || :| -GACUGCAGUCUCUGCAGGGGCA Usp19; Kiaa0891 mmu-miR-296 113 150 UGUCCU---AAC-UCCC---------------CCCCGGGA :||| ||| :||| ||||| -UGGGAGACUUGUGGGGACUGCAGUCUCUGCAGGGGCA-- Usp19; Kiaa0891 mmu-miR-298 23 46 CCUUCUUG-UCGGGAGG--AGACGG- ||:| :|||: || |||||: ---UGAGCUGGCCUACCUGUCUGCUC Usp19; Kiaa0891 mmu-miR-31 18 61 GUCGAUA--CGGUCG------UAGA-------------ACGGA |||:| ||::|| :||| ||||| -UGCUGUGAGCUGGCCUACCUGUCUGCUCACCAGGUCAUGCCUA Usp19; Kiaa0891 mmu-miR-326 66 95 UGACCUCCUU---------CCCGGGUCUCC ||| ||:| ||||:| ||| -GUGGUGGGAAACAACUCUGGGCUCUGAGC Usp19; Kiaa0891 mmu-miR-328 126 168 UGCCU--------------UCCCGUCUC------UCCCGGUC ||| :|||||||| ||||: | -GGGACUGCAGUCUCUGCAGGGGCAGAGUAUCCUAGGGUGUGU Usp19; Kiaa0891 mmu-miR-329 142 169 UUUUUCCAA--UCGA-----CCCACACAA |:|| ||: |||||||| --CAGGGGCAGAGUAUCCUAGGGUGUGUG Usp19; Kiaa0891 mmu-miR-330 6 29 AGAGACGUCCG-GGAC-ACGAAACG- |||||||| |||| ||: || --CCUGCAGGCACCUGCUGUGA-GCU Usp19; Kiaa0891 mmu-miR-331 107 150 AAGA---UCCUA-------UCC-GG----------GUCCCCG ||| :||| :|| |: ||||||| AUCUGGUGGGAGACUUGUGGGGACUGCAGUCUCUGCAGGGGCA Usp19; Kiaa0891 mmu-miR-337 10 32 UUUCCGUAGUAUAUC-CUCGACUU ||||| | | ||||||: -CAGGCACCUGCU-GUGAGCUGGC Usp19; Kiaa0891 mmu-miR-339 115 149 ACUC-GAGGACCUCC------------UGUCCCU- ||| ||: ||| || :|||||: GGAGACUUGUGG-GGACUGCAGUCUCUGCAGGGGC Usp19; Kiaa0891 mmu-miR-342 110 131 CUGCCCACGCUAAAGACACACUCU- |||| || :|||| |:|| ---UGGUGGGAGACUUGUG-GGGAC Usp19; Kiaa0891 mmu-miR-346 142 165 -UCUCCGUC-CGUGAG--CCCGUCUGU ||:||||| |:|: |||: CAGGGGCAGAGUAUCCUAGGGUG---- Usp19; Kiaa0891 mmu-miR-34a 1 23 UUGU-UGGUCGAUUCUGU-GACGGU :| ||| || ||:|| ||||: -GCUCACCUGC--AGGCACCUGCUG Usp19; Kiaa0891 mmu-miR-351 132 164 -GUCCGAGU--UUCCCG------AGGAGUCCCU ||| ||| |:|||| |||| |||| GCAGUCUCUGCAGGGGCAGAGUAUCCU-AGGGU Usp19; Kiaa0891 mmu-miR-365 122 151 -UAUUCCUAAAAA--------UCCCCGUAAU :|::||| ||||||| UGUGGGGACUGCAGUCUCUGCAGGGGCAG-- Usp19; Kiaa0891 mmu-miR-370 45 75 UUGGUCCAA---GG-UGGGG---UCGUCCG ||||||| || |||:: :|::|| CACCAGGUCAUGCCUACCUUUGUGGUGGGA Usp19; Kiaa0891 mmu-miR-379 15 46 -GGAUG-CAA------GGUAU--CAGAUGGU |||:| || || ||||:|: ACCUGCUGUGAGCUGGCCUACCUGUCUGCUC Usp19; Kiaa0891 mmu-miR-455-3p 97 136 -UCACAUAUACGGGCA--------------CCUGACGUA |||||||:| :|:| |||||||| CAGUGUAUGUAUCUGGUGGGAGACUUGUGGGGACUGCAG Usp19; Kiaa0891 mmu-miR-465-3p 203 227 AGAUGA--AUCUUU--CCGGGACUAG || | |||:: ||||||| CCUUGUCCUAGGGCUUGGCCCUGC-- Usp19; Kiaa0891 mmu-miR-466 87 110 CAGAAUACACACGCACAUACAUA- ||| |||||||||| CUCUGAGCCUCA-GUGUAUGUAUC Usp19; Kiaa0891 mmu-miR-467* 4 22 GUAUAUGUACGUCCGUGAAUG- || ||||||||| |:| ----CACCUGCAGGCACCUGCU Usp19; Kiaa0891 mmu-miR-469 126 151 -CCUGUGGUUCUAGUUACUUUCUCCGU- |||| || :|| || ||:|||| GGGACUGCA--GUCUCUGC-AGGGGCAG Usp19; Kiaa0891 mmu-miR-483 118 168 -UGUUCUGCCCU--------------CCCC------------UCCUCACU || | |||| |||| :|| ||| GACUUGUGGGGACUGCAGUCUCUGCAGGGGCAGAGUAUCCUAGGGUGUGU Usp19; Kiaa0891 mmu-miR-484 112 140 UAGCCCU-------CCCCUGAC-UCGGACU :|||| |||||||| ||:|| -GUGGGAGACUUGUGGGGACUGCAGUCUC- Usp19; Kiaa0891 mmu-miR-485-3p 142 172 CUCUCC-UCUCGG-------CACAUACUGA ||:|| ||||: ||||:|| | CAGGGGCAGAGUAUCCUAGGGUGUGUGUCC Usp19; Kiaa0891 mmu-miR-488 89 114 AACUC----UCACGAUAAUAGACCC |||| ||||: ||||||| CUGAGCCUCAGUGUAUGUAUCUGGU Usp19; Kiaa0891 mmu-miR-490 157 182 -GUCGUAC-CUCAGG-AGGUCCAAC- :|| :|| | |||| ||||| ||| CUAGGGUGUGUGUCCAUCCAG-UUGU Usp19; Kiaa0891 mmu-miR-494 83 111 -UCCAAA----GGG--CACAUACAAAGU :|| ||: |||||||| || UGGGCUCUGAGCCUCAGUGUAUGUAUCU Usp19; Kiaa0891 mmu-miR-500 197 218 -GACUUGGGAAC-GGGUCCACGUA ||| ||||||| ||:||| || UCUG-ACCCUUGUCCUAGG-GCU- Usp19; Kiaa0891 mmu-miR-503 8 46 -CGUC-----AUGACAA----------GGGC-GACGAU |||| |:|||| ||:| ||||| UGCAGGCACCUGCUGUGAGCUGGCCUACCUGUCUGCUC Usp19; Kiaa0891 mmu-miR-540 173 205 -GGUCC-----UAGCU------GGAGACUGGA |||| :||| :|||||||| UCCAGUUGUCUGUCGUCCUGUUUCUCUGACCC Usp19; Kiaa0891 mmu-miR-615 67 94 UUCUCCCUC---UG-GGUCCGAGCCU- :| |||| || |::||||| || UGGUGGGAAACAACUCUGGGCUCUGAG Usp19; Kiaa0891 mmu-miR-665 124 148 AUUCCCUGGAGUCGGAGGA---CCA :|||||: |||:|||: || -UGGGGACUGCAGUCUCUGCAGGGG Usp19; Kiaa0891 mmu-miR-666 1 30 CCGAGA--------GUGU-CGACACGGGCGA- |||| ||| |||||| ||| -GCUCACCUGCAGGCACCUGCUGUGA--GCUG Usp19; Kiaa0891 mmu-miR-667 144 172 GAACCCGACCCA------CCGUC-CACAGU |||| | || || | ||||| --GGGGCAGAGUAUCCUAGGGUGUGUGUCC Usp19; Kiaa0891 mmu-miR-671 194 226 -GGAGGUCGGGG--AGG-UCCCGAA---GGA- :|||:: |||: ||| ||||||| ||| UUCUCUGACCCUUGUCCUAGGGCUUGGCCCUG Usp19; Kiaa0891 mmu-miR-673 6 28 -GAGGUUCCUGGUCUCGACACUC- || ||:| ||| |||||||| CCUGCAGGCACCU--GCUGUGAGC Usp19; Kiaa0891 mmu-miR-674 75 104 AUG-UGG----UGAGGGUA-GAGUCACG- || ||: :|||: | |||||||: AACAACUCUGGGCUCUGAGCCUCAGUGUA Usp19; Kiaa0891 mmu-miR-675-5p 18 51 -UGACAC----CCGGGAA---AGGCG--UGGU- :||||| ||||: ||:|| |||| UGCUGUGAGCUGGCCUACCUGUCUGCUCACCAG Usp19; Kiaa0891 mmu-miR-682 116 137 GUCUGAAGUGACA-CUGACGUC- |||| : || |||||||| GAGAC--UUGUGGGGACUGCAGU Usp19; Kiaa0891 mmu-miR-683 124 147 -CUCCUG-UGUCGAAUGUCGUCC- |:|||| :|||: | ||||| UGGGGACUGCAGUCU-CUGCAGGG Usp19; Kiaa0891 mmu-miR-689 126 150 -CCUGGGG-CGGCU-CGCCCCUGC ||||: | |:| || |||:| GGGACUGCAGUCUCUGCAGGGGCA Usp19; Kiaa0891 mmu-miR-690 20 35 AAACCAACACUCGGAUCGGAAA ||||||| |:|||| -----CUGUGAGC-UGGCCUA- Usp19; Kiaa0891 mmu-miR-693-3p 7 31 AAUGUCGGUGUA-GACUUUCGACG |:||| ||| ||| :||||| CUGCAGGCACCUGCUGUGAGCUGG Usp19; Kiaa0891 mmu-miR-696 1 22 -GGGUGU-CGUUCGUGUGCG- |:||| |||:|||| :|| GCUCACCUGCAGGCACCUGCU Usp19; Kiaa0891 mmu-miR-697 135 167 -AGAGGUGUCCU----------GGUCCUACAA ||||::||||: |:|||:||| GUCUCUGCAGGGGCAGAGUAUCCUAGGGUGUG Usp19; Kiaa0891 mmu-miR-699 46 61 GCUCGGUCCAGCGUGACGGA- ||||||| ||||| ---ACCAGGUCA---UGCCUA Usp19; Kiaa0891 mmu-miR-702 140 169 CUCG-CCCCAUU--------UCCCACCCGU || |||| |: |||||| |: -UGCAGGGGCAGAGUAUCCUAGGGUGUGUG Usp19; Kiaa0891 mmu-miR-705 29 50 ACGGGUGGGGUGGAGGGUGG- |||:|||: |: |:|||| GGCCUACCUGUCUGCUCACCA Usp19; Kiaa0891 mmu-miR-709 184 212 -AGGAGGACG--GAGAC-GG----AGG- || |||||: ||||| || ||| GUCGUCCUGUUUCUCUGACCCUUGUCCU Usp19; Kiaa0891 mmu-miR-710 195 222 -GAG-UUGAGA--GGGGUUCUGAACC- ||| :|| || :||:|:|:||||| UCUCUGACCCUUGUCCUAGGGCUUGGC Usp19; Kiaa0891 mmu-miR-712* 105 126 GUUGUGGGCC-CCCACUGAGCGU :|:|:|| ||| ||||:|: --GUAUCUGGUGGGAGACUUGUG Usp19; Kiaa0891 mmu-miR-713 85 105 -CGACACACGGAAGUCACGU- ||| || |||| |||||:| GGCUCUGAGCCU-CAGUGUAU Usp19; Kiaa0891 mmu-miR-714 198 226 CGCUGG----------CUG-GCCGGGAGCAGC :|||| |:| :|||||| CUGACCCUUGUCCUAGGGCUUGGCCCUG---- Usp19; Kiaa0891 mmu-miR-718 84 120 GCUGUGGGC-CGGC--------------CCGCCUUC- |:| :|:| ||| ||:||:|| GGGC-UCUGAGCCUCAGUGUAUGUAUCUGGUGGGAGA Usp19; Kiaa0891 mmu-miR-744 204 228 CGACAA---UCGGGAUCGGGGCGU :||| :| |:|:||||:|| CUUGUCCUAGGGCUUGGCCCUGCU Usp19; Kiaa0891 mmu-miR-761 205 230 ACACAG--UCA--AAGUGGGACGACG |||| || || :|||||||| -UUGUCCUAGGGCUUGGCCCUGCUGG Usp19; Kiaa0891 mmu-miR-762 204 226 CGAGACAGGG-CCGGGGUCGGGG- :|||||: || |:::||||: --CUUGUCCUAGGGCUUGGCCCUG Usp19; Kiaa0891 mmu-miR-763 208 231 CGGUGACCAAGAAGGGUCGACC- || || |: ||| ||||| UCCUAGGGCUUGGCCCUGCUGGA Usp19; Kiaa0891 mmu-miR-764-3p 8 39 -UGUCAAC-GGUGAU-----ACCGGA-GGA- :||| |::||: |||||| ||| UGCAGGCACCUGCUGUGAGCUGGCCUACCUG Usp19; Kiaa0891 mmu-miR-764-5p 113 133 -UCCUCCUGUACACUCGUGG- :||| ||| ||||:| ||: UGGGA-GACUUGUGGGGACUG Usp19; Kiaa0891 mmu-miR-770-3p 34 63 -GGU----CGA--GGUGCAGUCCGGGUGC || ||| ||| |||| |||:|| ACCUGUCUGCUCACCAGGUCAUGCCUACC Usp19; Kiaa0891 mmu-miR-804 63 87 -AGGUCCACUCCUUGUUGAGUGU- |: ||||:| |||||||| : UUUGUGGUGGGAAACAACUCUGGG Usp19; Kiaa0891 mmu-miR-99b 140 166 GCGUUCCAG-C-CAA--GAUGCCCAC- |||:|| | || ||| ||||| UGCAGGGGCAGAGUAUCCUA-GGGUGU Usp19; Kiaa0891 mmu-miR-17-3p 129 136 A------------------------UGUUCACGGGAGUGACGUCA || ||| |||||||| CCUCAGUGUAUGUAUCUGGUGGGAGACUUGUGGGG--ACUGCAGUC Usp19; Kiaa0891 mmu-miR-214 222 229 -----------GAC-GG--ACAG--------ACACGGACGACA ||| || |||| || ||||||| GUCCUGUUUCUCUGACCCUUGUCCUAGGGCUUGGCCCUGCUGG Usp19; Kiaa0891 mmu-miR-24 89 96 GACA-----------------------AGGA-CGACUUGACUCGGU ||: ||| ||||||| AUGCCUACCUUUGUGGUGGGAAACAACUCUGGGCU---CUGAGCCU Usp19; Kiaa0891 mmu-miR-329 161 168 UUU--------------UUCCAAUC------GA-CCCACACAA |:|| || || |||||||| GGGACUGCAGUCUCUGCAGGGGCAGAGUAUCCUAGGGUGUGUG Usp19; Kiaa0891 mmu-miR-455-3p 128 135 -----UCACAUAUACGGGCA--------------CCUGACGUA |||||||:| |:| |||||||| GCCUCAGUGUAUGUAUCUGGUGGGAGACUUGUGGGGACUGCAG Usp19; Kiaa0891 mmu-miR-466 101 108 C---------------------AGAAUACACACGCACAUACAUA ||| |||||||||| GUGGUGGGAAACAACUCUGGGCUCUGAGCCUCA-GUGUAUGUAUC Usp19; Kiaa0891 mmu-miR-488 106 113 A------------------ACUC----UCACGAUAAUAGACCC |||| ||||: ||||||| GGGAAACAACUCUGGGCUCUGAGCCUCAGUGUAUGUAUCUGGU Usp19; Kiaa0891 mmu-miR-540 197 204 ------------GGUCC-----UAGCU------GGAGACUGGA |||| :||| :|||||||| GUGUGUGUCCAUCCAGUUGUCUGUCGUCCUGUUUCUCUGACCC Usp19; Kiaa0891 mmu-miR-674 95 102 A------------------UGUGG--UGAGGGUA-GAGUCACG || |: :|||: | |||||||: ACCUUUGUGGUGGGAAACAACUCUGGGCUCUGAGCCUCAGUGUA Usp19; Kiaa0891 mmu-miR-682 128 135 G-----------------------UCUGAAGUGACA-CUGACGUC |||||| || |||||||| GCCUCAGUGUAUGUAUCUGGUGGGAGACUUG--UGGGGACUGCAGU Usp19; Kiaa0891 mmu-miR-761 222 229 AC-----------------ACAG---UCA-AAGUGGGACGACG |||| :| || :|||||||| GUCCUGUUUCUCUGACCCUUGUCCUAGGGCUUGGCCCUGCUGG Usp19; Kiaa0891 mmu-let-7d 16 39 uGAU-ACGUUGGAU--GAUGGAga ||: ||::| ||: |||||| cCTGCTGTGAGCTGGCCTACCTgt Usp19; Kiaa0891 mmu-let-7e 16 39 uGAU-AUGUUGGA--GGAUGGAgu ||: |:::| || ||||||| cCTGCTGTGAGCTGGCCTACCTgt Usp19; Kiaa0891 mmu-let-7g 16 39 uGAC-AUGUUUGAU--GAUGGAgu ||| |:::|:||: |||||| cCTGCTGTGAGCTGGCCTACCTgt Usp19; Kiaa0891 mmu-miR-101a 172 194 gAAGUCAAUAG-UGUCAUGACAu | |||||:|| :: || |||| aTCCAGTTGTCTGTCGTCCTGTt Usp19; Kiaa0891 mmu-miR-101b 172 194 gAAGUCGAUAG-UGUCAUGACAu | |||:|:|| :: || |||| aTCCAGTTGTCTGTCGTCCTGTt Usp19; Kiaa0891 mmu-miR-10a 126 148 guguuuaagccuAGAUGUCCCau |||:||||| gggactgcagtcTCTGCAGGGgc Usp19; Kiaa0891 mmu-miR-10b 124 146 uguguUUAAGCCA-AGAUGUCCC | | | || |||:||||| tggggACTGCAGTCTCTGCAGGG Usp19; Kiaa0891 mmu-miR-125a 123 147 guguCC-AAUUUCCCAGA-GUCCCu || |: || ||| ||||| gtggGGACTGCAGTCTCTGCAGGGg Usp19; Kiaa0891 mmu-miR-125b 125 147 aguguucaaUCCCAGA-GUCCCu || ||| ||||| ggggactgcAGTCTCTGCAGGGg Usp19; Kiaa0891 mmu-miR-133a 105 133 ugUCGACCAACUU-------CCCCUGguu | ||||| |:| |||||| gtATCTGGTGGGAGACTTGTGGGGACtgc Usp19; Kiaa0891 mmu-miR-133b 106 133 AUCGACCAACUU-------CCCCUGguu || ||||| |:| |||||| TATCTGGTGGGAGACTTGTGGGGACtgc Usp19; Kiaa0891 mmu-miR-134 35 56 GGGGAGACCAGUUGGU-CAGUgu ||: |||| || |||| |||| CCTGTCTGCTC-ACCAGGTCAtg Usp19; Kiaa0891 mmu-miR-140* 44 71 AG-GCACCA--A--GAUGG-GACACCAu || | ||| | ||||| :|||||| TCACCAGGTCATGCCTACCTTTGTGGTg Usp19; Kiaa0891 mmu-miR-149 127 151 CCUCACUUCUG---UGCCUCGGUCU ||| || || | :| |:| |||| GGACTGCAGTCTCTGCAGGGGCAGA Usp19; Kiaa0891 mmu-miR-150 97 119 GUGAC---CAUGUUCCCAACCCUCU || || |||: || ||||||| CAGTGTATGTATCTGG--TGGGAGA Usp19; Kiaa0891 mmu-miR-17-3p 118 136 aUGUUCACGGGAGUGACGUCA || ||| |||||||| gACTTGTG--GGGACTGCAGT Usp19; Kiaa0891 mmu-miR-18 37 65 AUAGAC--GUGAUC---UACG--UGGAAu |:|||| ||| || |||| ||||| TGTCTGCTCACCAGGTCATGCCTACCTTt Usp19; Kiaa0891 mmu-miR-185 127 143 CUUGACGGAAAGAGAGGU |:|||| | ||||| || GGACTG-CAGTCTCTGCA Usp19; Kiaa0891 mmu-miR-199b 63 86 cuuguCCAUCAGAU-UUGUGACCC |||:| | ||| ||||| tttgtGGTGGGAAACAACTCTGGG Usp19; Kiaa0891 mmu-miR-212 114 135 CCGGCACUG---ACCUCUGACaau || | ||| |||:||||| GG--GAGACTTGTGGGGACTGcag Usp19; Kiaa0891 mmu-miR-214 205 229 gAC-GGA---CAGACACGGACGACa || ||| | :|| ||||||| tTGTCCTAGGGCTTGGCCCTGCTGg Usp19; Kiaa0891 mmu-miR-214 178 196 gACGGACAGACACGGACGAca ||:||||| || ||||:| tTGTCTGTC-GT-CCTGTTtc Usp19; Kiaa0891 mmu-miR-215 34 55 caGACAGUUUAGU-AUCCAGUA ||||| : ||| ||||||| acCTGTCTGCTCACCAGGTCAT Usp19; Kiaa0891 mmu-miR-22 132 153 uGUCA-AGAAGUUGACCGUCgaa |||| ||| ||: ||||| gCAGTCTCTGCAG-GGGCAGagt Usp19; Kiaa0891 mmu-miR-222 91 110 CUCUGGGUCAUCGGUCUACAUCGA ||| |:|||| |: ||||| || GAGCCTCAGT-GT---ATGTATCT Usp19; Kiaa0891 mmu-miR-24 74 96 gacaagGACGACUU--GACUCGGu || |||:: ||||||| aaacaaCT-CTGGGCTCTGAGCCt Usp19; Kiaa0891 mmu-miR-24 11 33 gacaaGGACG--ACUUGACUCGGu ||||| |||:||| ||| aggcaCCTGCTGTGAGCTG-GCCt Usp19; Kiaa0891 mmu-miR-28 11 34 gaguuaucuGACACUCGA--GGAa ||||||||| ||| aggcacctgCTGTGAGCTGGCCTa Usp19; Kiaa0891 mmu-miR-293 127 151 ugUGAUGUUUGAGA---CGCCGUga |||:||: |||| | |||| ggACTGCAGTCTCTGCAGGGGCAga Usp19; Kiaa0891 mmu-miR-296 124 151 uguCCUAAC-UC-----C-CCCCCGgga ||| || || | ||||| tggGGACTGCAGTCTCTGCAGGGGCaga Usp19; Kiaa0891 mmu-miR-298 20 44 ccuuCUUGUCGGGA-GG--AGACGg ||:| | ||| || ||||| ctgtGAGCTGGCCTACCTGTCTGCt Usp19; Kiaa0891 mmu-miR-31 40 59 GUCGAUACGGUCGUAGAACGGA | ||| |||| :|| ||||| CTGCT-CACCAG-GTCATGCCT Usp19; Kiaa0891 mmu-miR-324-3p 129 153 gGUCGUCGUGGA---CCCCGUCACc | ||||: :|| ||||||| | aCTGCAGTCTCTGCAGGGGCAGAGt Usp19; Kiaa0891 mmu-miR-326 65 94 ugACC-UCCUU--------CCCGGGUCUCc ||| :|||| ||||:| ||| tgTGGTGGGAAACAACTCTGGGCTCTGAGc Usp19; Kiaa0891 mmu-miR-328 124 150 ugCCUUCCCGUC-----UCUCCCGGUC ||:| |||| : |||| ||| tgGGGACTGCAGTCTCTGCAGGGGCAG Usp19; Kiaa0891 mmu-miR-329 145 168 uuuuUC-CAAUCGA-CCCACACAa || || || |||||||| gggcAGAGTATCCTAGGGTGTGTg Usp19; Kiaa0891 mmu-miR-330 4 25 agaGACGUCCG-GGACACGAAACg |||||||| || |||| || cacCTGCAGGCACC--TGCTGTGa Usp19; Kiaa0891 mmu-miR-331 128 148 aagauccuauccggGUCCCCG ||||||| gactgcagtctctgCAGGGGC Usp19; Kiaa0891 mmu-miR-337 9 31 uuUCCGUAGUAUAUCCUCGACuu ||||| | |: |||||| gcAGGCACCTGCTGTGAGCTGgc Usp19; Kiaa0891 mmu-miR-339 131 153 AC-UCGAGGACCU-CCUGUCCCu || ||: :||| | ||:||| | TGCAGTCTCTGCAGGGGCAGAGt Usp19; Kiaa0891 mmu-miR-342 96 119 cugCCCACGCUAAAGA-CACACUCU | || :| | ||| ||| |||| tcaGTGTATG-TATCTGGTGGGAGA Usp19; Kiaa0891 mmu-miR-346 128 153 ucucCGUCCGUGA-G--CCCGUCUgu |||| | || | ||||||| gactGCAGTCTCTGCAGGGGCAGAgt Usp19; Kiaa0891 mmu-miR-351 116 147 gUCCGAGUUUCCC-GA------GGA-GUCCCu || ||:: :||| || :|| ||||| gAGACTTGTGGGGACTGCAGTCTCTGCAGGGg Usp19; Kiaa0891 mmu-miR-365 131 152 uauUCCUAAAAAUCCCCGUaau || | | ||||||| tgcAGTCTCTGCAGGGGCAgag Usp19; Kiaa0891 mmu-miR-370 33 52 uUGGUCCAAGGUGGGGUCGUCCg ||| | ||:: |:|| |||| tACCTG--TCTG-CTCACCAGGt Usp19; Kiaa0891 mmu-miR-379 16 37 GGAUG-CAAGGUAUCAGAUGGu |||:| || |:| ||||| CCTGCTGTGAGCTGGCCTACCt Usp19; Kiaa0891 mmu-miR-455-3p 102 135 ucACAUAUAC--------GGGCA--CCUGACGUa ||||| || |::|| |||||||| taTGTATCTGGTGGGAGACTTGTGGGGACTGCAg Usp19; Kiaa0891 mmu-miR-465-3p 205 228 agauGAAUCUU--UCCGGGACUAg | |||:: ||||||| | ttgtCCTAGGGCTTGGCCCTGCTg Usp19; Kiaa0891 mmu-miR-466 80 108 cAGAAU--ACACACG----CACAUACAUA ||| : | || || |||||||||| cTCTGGGCTCTGAGCCTCAGTGTATGTAT Usp19; Kiaa0891 mmu-miR-467* 1 20 guauaUGUACGUCCGUGAAUG || ||||||||| |:| -gctcACCTGCAGGCACCTGC Usp19; Kiaa0891 mmu-miR-469 127 149 CCUGUGGUUCUAGUUACUUUCUCCGU |||| || :|| || ||:|||| GGACTGCA--GTCTCTG-CAGGGGCA Usp19; Kiaa0891 mmu-miR-483 107 133 uguuCUGCCCUC----CCCUCCUCACu |::||||| | |:||| || atctGGTGGGAGACTTGTGGGGACTGc Usp19; Kiaa0891 mmu-miR-484 107 133 UAGCCCUCCC-CUGA----CUCGGACu ||| || ||| |||| |:| ||| ATCTGGTGGGAGACTTGTGGGGACTGc Usp19; Kiaa0891 mmu-miR-488 89 113 aACUC----UCACGAUA-AUAGACCc |||| |||| ||| ||||||| cTGAGCCTCAGTG-TATGTATCTGGt Usp19; Kiaa0891 mmu-miR-490 158 180 gUCGUAC-CUCAGG-AGGUCCAAC || :|| | |||| |||| |||| tAGGGTGTGTGTCCATCCA-GTTG Usp19; Kiaa0891 mmu-miR-494 89 110 uccaaaGGG-CACAUACAAAGu |:| |||||||| || ctgagcCTCAGTGTATGTATCt Usp19; Kiaa0891 mmu-miR-500 198 218 GACUUGGGAAC-GGGUCCACGua ||| ||||||| ||:||| || CTG-ACCCTTGTCCTAGG-GCtt Usp19; Kiaa0891 mmu-miR-503 19 45 CGUCA--UGAC---AAGGGC-GACGAu || || :||| | ||:| ||||| GCTGTGAGCTGGCCTACCTGTCTGCTc Usp19; Kiaa0891 mmu-miR-540 174 204 GGUC--C---UAGCUG------GAGACUGGa |||| | :||| | |||||||| CCAGTTGTCTGTCGTCCTGTTTCTCTGACCc Usp19; Kiaa0891 mmu-miR-652 146 174 aCGUGU--UGGGAU--CAC-CGC-GGUAa ||| | |:|||| ||| |:| |||| gGCAGAGTATCCTAGGGTGTGTGTCCATc Usp19; Kiaa0891 mmu-miR-665 123 146 auuCCCUGGAGUCGGAG--GACCa |||||: |||:||| | || gtgGGGACTGCAGTCTCTGCAGGg Usp19; Kiaa0891 mmu-miR-666 12 44 CCGAGAGUG----UCGAC-------ACGGGCGA ||| | ::| ||||| ||:|:||| GGCACCTGCTGTGAGCTGGCCTACCTGTCTGCT Usp19; Kiaa0891 mmu-miR-667 157 183 GAACCCGACCCAC-----CGUCCACAGu || ||| || ||| ||| |||| CTAGGG-TGTGTGTCCATCCAGTTGTCt Usp19; Kiaa0891 mmu-miR-671 195 223 gGAGGUCGGGGA---GGUCCCGAA--GGa |||:: |||:| |:||||||| || tCTCTGACCCTTGTCCTAGGGCTTGGCCc Usp19; Kiaa0891 mmu-miR-673 7 26 GAGGUUCCUGGUCUCGACACUC || ||:| ||| |||||||| CTGCAGGCACC--TGCTGTGAG Usp19; Kiaa0891 mmu-miR-674 75 102 aUGUGGUGA---GGG---UAGAGUCACg ||| | || |:| : ||||||| aACAACTCTGGGCTCTGAGCCTCAGTGt Usp19; Kiaa0891 mmu-miR-675-5p 19 49 uGACAC----CCG---GGAAAGGC--GUGGU ||||| ||| ||| ||:| ||||| gCTGTGAGCTGGCCTACCTGTCTGCTCACCA Usp19; Kiaa0891 mmu-miR-682 116 135 gUCUGAAGUGACACUGACGUC |||||| :: | |||||||| gAGACTT-GTGGGGACTGCAG Usp19; Kiaa0891 mmu-miR-683 125 145 CUCCUG-UGUC-GAAUGUCGUCC |:|||| :||| || | ||||| GGGGACTGCAGTCT--CTGCAGG Usp19; Kiaa0891 mmu-miR-689 115 131 CCUGGGGCGGCUCGCCCCUGc ||| | | |:|||||| GGA----GACTTGTGGGGACt Usp19; Kiaa0891 mmu-miR-690 15 35 aaacCAACACUCGGAUCGGAaa | |||||| ||:|||| acctGCTGTGAG-CTGGCCTac Usp19; Kiaa0891 mmu-miR-696 2 20 GGGU-GUCGUUCGUGUGCG |:|| | |||:|||| :|| CTCACCTGCAGGCACCTGC Usp19; Kiaa0891 mmu-miR-697 136 166 AGAGGUGUCCU----------GGUCCUACAa ||||::||||: |:|||:||| TCTCTGCAGGGGCAGAGTATCCTAGGGTGTg Usp19; Kiaa0891 mmu-miR-699 43 59 gcucGGUCCAGCGUGACGGA |||||| || ||||| ctcaCCAGGT--CA-TGCCT Usp19; Kiaa0891 mmu-miR-702 145 168 CUCGCCCCAU---UUCCCACCCgu |:|| | ||| |||||| | GGGCAGAGTATCCTAGGGTGTGtg Usp19; Kiaa0891 mmu-miR-709 169 190 AGG-AGGACGG-AGACGG-AGG ||| ||| |:: ||||:| ||| TCCATCCAGTTGTCTGTCGTCC Usp19; Kiaa0891 mmu-miR-710 196 220 GAG-UUGAGA--GGGGUUCUGAACC ||| :|| || :||:|:|:||||| CTCTGACCCTTGTCCTAGGGCTTGG Usp19; Kiaa0891 mmu-miR-712* 103 125 guugUGGGCC-CCCACUGAGCgu |:|:|| ||| ||||:| atgtATCTGGTGGGAGACTTGtg Usp19; Kiaa0891 mmu-miR-713 86 103 CGACACACGGAAGUCACGU ||| || ||| ||||||:| GCTCTGAGCC-TCAGTGTA Usp19; Kiaa0891 mmu-miR-714 185 210 cGCUGG-C----UGGCCGGGAGCAGc || || | |:| ||||:||| tCGTCCTGTTTCTCTGACCCTTGTCc Usp19; Kiaa0891 mmu-miR-718 98 118 gcugugggccgGCCCGCCUUC | ||:||:|| agtgtatgtatCTGGTGGGAG Usp19; Kiaa0891 mmu-miR-761 204 229 acACAG----UCAAAGUGGGACGACg |||| :| || :|||||||| ctTGTCCTAGGGCTTGGCCCTGCTGg Usp19; Kiaa0891 mmu-miR-762 202 224 cGAGACAGGG-CCGGGGUCGGGg | :|||||: || |:::|||| cCCTTGTCCTAGGGCTTGGCCCt Usp19; Kiaa0891 mmu-miR-763 207 229 CGGUGACCAAGAA--GGGUCGACC |:| || | ||| ||| ||||| GTC-CTAGGGCTTGGCCCTGCTGG Usp19; Kiaa0891 mmu-miR-764-3p 13 37 uGUCAACGGUGAU--ACCGGA-GGA || |||::: | |||||| ||| gCACCTGCTGTGAGCTGGCCTACCT Usp19; Kiaa0891 mmu-miR-770-3p 16 36 GGUCGAGGUGCAGUCCGGGUGc || ||| :: | | ||||:|| CCTGCTGTGAG-CTGGCCTACc Usp19; Kiaa0891 mmu-miR-770-3p 39 62 gGUCGA--GGUGCAGUCCGGGUGc | ||| ||| |||| |||:|| tCTGCTCACCAGGTCATGCCTACc Usp19; Kiaa0891 mmu-miR-804 64 85 agguCCACUCCUUGUUGAGugu ||||:| |||||||| ttgtGGTGGGAAACAACTCtgg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp19 RAID00047556 mmu-miR-1907 miRNA MIMAT0007876 Usp19 mRNA 71472 CLIP-seq 0.5483 Usp19 RAID00055015 mmu-miR-146b-5p miRNA MIMAT0003475 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID00123292 mmu-miR-30a-5p miRNA MIMAT0000128 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID00124447 mmu-miR-24-3p miRNA MIMAT0000219 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID00130514 mmu-miR-30d-5p miRNA MIMAT0000515 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID00184737 mmu-miR-761 miRNA MIMAT0003893 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6478 Usp19 RAID00301984 mmu-miR-7007-5p miRNA MIMAT0027918 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID00314192 mmu-miR-6395 miRNA MIMAT0025146 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID00497268 mmu-miR-146b-3p miRNA MIMAT0004826 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID00534727 mmu-miR-15b-5p miRNA MIMAT0000124 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID00601374 mmu-miR-146a-5p miRNA MIMAT0000158 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID00868224 mmu-miR-491-5p miRNA MIMAT0003486 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID00933347 mmu-miR-30e-5p miRNA MIMAT0000248 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID01026142 mmu-miR-383-3p miRNA MIMAT0017082 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01070865 mmu-miR-103-3p miRNA MIMAT0000546 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID01122150 mmu-miR-362-3p miRNA MIMAT0004684 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01163935 mmu-miR-125a-3p miRNA MIMAT0004528 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01261593 mmu-miR-2861 miRNA MIMAT0013803 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01456919 mmu-miR-7005-5p miRNA MIMAT0027914 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01504608 mmu-miR-224-5p miRNA MIMAT0000671 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID01553468 mmu-miR-15a-5p miRNA MIMAT0000526 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID01693813 mmu-miR-199a-5p miRNA MIMAT0000229 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01712465 mmu-miR-200a-3p miRNA MIMAT0000519 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID01825851 mmu-miR-195a-5p miRNA MIMAT0000225 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID01956017 mmu-miR-8108 miRNA MIMAT0031413 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02009691 mmu-miR-19a-3p miRNA MIMAT0000651 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID02024022 mmu-miR-329-3p miRNA MIMAT0000567 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02067304 mmu-miR-497a-5p miRNA MIMAT0003453 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID02171746 mmu-miR-214-3p miRNA MIMAT0000661 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6478 Usp19 RAID02204924 mmu-miR-223-3p miRNA MIMAT0000665 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02209546 mmu-miR-150-5p miRNA MIMAT0000160 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02254393 mmu-miR-503-5p miRNA MIMAT0003188 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID02325422 mmu-miR-107-3p miRNA MIMAT0000647 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID02385385 mmu-miR-3091-3p miRNA MIMAT0014904 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02424803 mmu-miR-374b-5p miRNA MIMAT0003727 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02434377 mmu-miR-30c-5p miRNA MIMAT0000514 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID02486138 mmu-miR-21a-5p miRNA MIMAT0000530 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02600069 mmu-miR-328-3p miRNA MIMAT0000565 Usp19 mRNA 71472 Prediction 0.2202 Usp19 RAID02667753 mmu-miR-199b-5p miRNA MIMAT0000672 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02714991 mmu-miR-590-5p miRNA MIMAT0004895 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02715744 mmu-miR-292b-3p miRNA MIMAT0029865 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02783752 mmu-miR-6975-5p miRNA MIMAT0027852 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02828382 mmu-miR-877-3p miRNA MIMAT0004862 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02847523 mmu-miR-540-3p miRNA MIMAT0003167 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02900800 mmu-miR-155-5p miRNA MIMAT0000165 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02930937 mmu-miR-6419 miRNA MIMAT0025175 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID02986224 mmu-miR-590-3p miRNA MIMAT0004896 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID03053585 mmu-miR-542-3p miRNA MIMAT0003172 Usp19 mRNA 71472 Prediction 0.2202 Usp19 RAID03055101 mmu-miR-186-5p miRNA MIMAT0000215 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID03077303 mmu-miR-6915-5p miRNA MIMAT0027730 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID03238715 mmu-miR-30b-5p miRNA MIMAT0000130 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID03523502 mmu-miR-873a-5p miRNA MIMAT0004936 Usp19 mRNA 71472 Prediction 0.1828 Usp19 RAID03554512 mmu-miR-19b-3p miRNA MIMAT0000513 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID03673308 mmu-miR-322-5p miRNA MIMAT0000548 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID03849823 mmu-miR-384-5p miRNA MIMAT0004745 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID03876673 mmu-miR-16-5p miRNA MIMAT0000527 Usp19 mRNA 71472 CLIP-seq//Prediction 0.6308 Usp19 RAID04006442 mmu-miR-141-3p miRNA MIMAT0000153 Usp19 mRNA 71472 Prediction 0.1828