DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Rnf151 | mmu-miR-34c | beg:106 | end:117 | pic:3' CGTTAGTCGATTGATGTGACGGA 5'& |||||||| &5' --------------ACACTGCC- 3' |
Rnf151 | mmu-miR-327 | beg:34 | end:52 | pic:3' TAGGAGTACGGGGAGTTCA 5'& ||||| |||||||| &5' --CCTCACA--CCTCAAGT 3' |
Rnf151 | mmu-miR-1958 | beg:310 | end:326 | pic:3' TGAATGACGAAGGTGAAAGGAT 5'& |||| ||||||||| &5' -----CTGC----ACTTTCCTA 3' |
Rnf151 | mmu-miR-770-3p | beg:20 | end:38 | pic:3' GGTCGAGGTGCAGTCCGGGTGC 5'& ||| | | ||||||| &5' ------CCAGGCCTGGCCCAC- 3' |
Rnf151 | mcmv-miR-M23-2 | beg:139 | end:158 | pic:3' GGCGAACTGGCTCC---GGGGGTA 5'& |||. |||||| &5' ------GACTTTTTTTTCCCCCA- 3' |
Rnf151 | mcmv-miR-M23-2 | beg:241 | end:260 | pic:3' GGCGAACTGGCTC--CGGGGGTA 5'& ||.|| |.|||||| &5' -------ACTGAATAGTCCCCAT 3' |
Rnf151 | mmu-miR-1188 | beg:25 | end:46 | pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||||||| |||||||||| &5' -CCTGGCCC-ACCTCACACC- 3' |
Rnf151 | mmu-miR-142-3p | beg:96 | end:116 | pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |||||| |.|||||.| &5' TCCATATT-----AGACACTGC- 3' |
Rnf151 | mmu-miR-185 | beg:289 | end:305 | pic:3' AGTCCTTGACGGAA-AGAGAGGT 5'& |||| |||||||| &5' ----------CCTTGTCTCTCCA 3' |
Rnf151 | mmu-miR-185 | beg:139 | end:155 | pic:3' AGTCCTTGAC-GGAAAGAGAGGT 5'& | |.|||.|.||| &5' ---------GACTTTTTTTTCC- 3' |
Rnf151 | mmu-miR-185 | beg:102 | end:127 | pic:3' AGTCCTTGAC-GGAAAGAGAGGT 5'& |.|| |||| ||||||| || &5' TTAGACACTGCCCTTTCTTCCC- 3' |
Rnf151 | mmu-miR-1902 | beg:305 | end:322 | pic:3' TTCAGTACGGATGACGTGGAGA 5'& |.|| ||||||.|. &5' -------GTCTCCTGCACTTT- 3' |
Rnf151 | mmu-miR-1929 | beg:109 | end:131 | pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||| || |||.|| &5' --CTGCCCTTTCTTC-CCTGGA- 3' |
Rnf151 | mmu-miR-1953 | beg:303 | end:326 | pic:3' GTCTTC-GGACTCTTGAAAGGGT 5'& .|. |||| |||||||.| &5' -GGGTCTCCTGC--ACTTTCCTA 3' |
Rnf151 | mmu-miR-1956 | beg:109 | end:133 | pic:3' AGGCGACTGAGTCGGGACCTGA 5'& |.|| .|| ||||||||| &5' -CTGCCCTTTCTTCCCTGGACT 3' |
Rnf151 | mmu-miR-1957 | beg:229 | end:248 | pic:3' CAGTATACGAGATGGTGAC 5'& ||.| ||||.||||| &5' GTTAGA---TCTATCACTG 3' |
Rnf151 | mmu-miR-1982star | beg:195 | end:217 | pic:3' GGAGGGGTCCTGGGAGGGTT 5'& || ||||| |||||||. &5' CCACCCCACCA-CCTCCCAG 3' |
Rnf151 | mmu-miR-19astar | beg:259 | end:271 | pic:3' CATCACGTTGATACGTTTTGAT 5'& ||||||.|| &5' ------------TGCAAAGCT- 3' |
Rnf151 | mmu-miR-2145 | beg:20 | end:36 | pic:3' TTGGTCCGGGCTGGGACGA 5'& |||||||.|.||| &5' --CCAGGCCTGGCCC---- 3' |
Rnf151 | mmu-miR-22star | beg:368 | end:384 | pic:3' ATTTCGAACGGTG-ACTTCTTGA 5'& || |||||||. &5' ---------CCTAATGAAGAAT- 3' |
Rnf151 | mmu-miR-291b-3p | beg:301 | end:322 | pic:3' TGTTTGTTTTACCT-----ACGTGAAA 5'& ||||. |||||||| &5' ---------ATGGGTCTCCTGCACTTT 3' |
Rnf151 | mmu-miR-3099 | beg:208 | end:231 | pic:3' AGGGGT---TGGAGAGAGATCGGAT 5'& .|||| ||.|||.||| || &5' -TCCCAGACACTTCTTTCT--CC-- 3' |
Rnf151 | mmu-miR-30c-1star | beg:126 | end:143 | pic:3' CCTCATTTGTTGG-GAGAGGGTC 5'& .||. .|||||||| &5' ---------GACTGTTCTCCCAG 3' |
Rnf151 | mmu-miR-30c-2star | beg:124 | end:143 | pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |..|| |. |||||||| &5' ----TGGACTGT--TCTCCCAG 3' |
Rnf151 | mmu-miR-344 | beg:228 | end:240 | pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& ||.|||||| &5' -------------GGTTAGATC- 3' |
Rnf151 | mmu-miR-3471 | beg:292 | end:313 | pic:3' TTACGGAATGTCAACCTAGAGT 5'& ||.|| | |||.|||| &5' --TGTCTCTCCA-TGGGTCTC- 3' |
Rnf151 | mmu-miR-3473 | beg:111 | end:125 | pic:3' CCGACTCGGTAGAGAGGT 5'& ||| |.|||.| &5' ------GCCCTTTCTTC- 3' |
Rnf151 | mmu-miR-34a | beg:97 | end:117 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| |||||||||| &5' ----CCATATTAGACACTGCC- 3' |
Rnf151 | mmu-miR-34b-5p | beg:98 | end:117 | pic:3' TGT-TAGTCGATTAATGTGACGGA 5'& || ||.|| |||||||| &5' -CATATTAG------ACACTGCC- 3' |
Rnf151 | mmu-miR-379 | beg:225 | end:245 | pic:3' GGATGCAAGGT--ATC-AGATGGT 5'& |||. ||| ||||.|| &5' -------TCCGGTTAGATCTATCA 3' |
Rnf151 | mmu-miR-382 | beg:320 | end:343 | pic:3' GCTTAGGTGGTGCT----TGTTGAAG 5'& |.|||| || |.|.|||| &5' -----CTACCA-GACTTAATAGCTTC 3' |
Rnf151 | mmu-miR-423-5p | beg:109 | end:121 | pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||||||.|. &5' -------------CTGCCCTTT- 3' |
Rnf151 | mmu-miR-449a | beg:97 | end:117 | pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||| |. |||||||| &5' -CCAT---ATTAGACACTGCC- 3' |
Rnf151 | mmu-miR-449b | beg:97 | end:117 | pic:3' CGGTCGATTGTTGTGACGGA 5'& ||| .|||||||| &5' -CCATATTA-GACACTGCC- 3' |
Rnf151 | mmu-miR-449c | beg:97 | end:117 | pic:3' GGTC-GATCGTTACGTGACGGA 5'& ||| .||| ||||||| &5' CCATATTAGA----CACTGCC- 3' |
Rnf151 | mmu-miR-450b-5p | beg:247 | end:269 | pic:3' ATAAGTCCTT-GTATGACGTTTT 5'& .|| ||| |||||||. &5' ----TAGTCCCCATCCTGCAAAG 3' |
Rnf151 | mmu-miR-452 | beg:76 | end:97 | pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||.. ||| |||||||. &5' --CTTGTCATCC-CTGCAAAT- 3' |
Rnf151 | mmu-miR-491 | beg:239 | end:260 | pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& ||| ||| ||||||. &5' --TCACTGAATAG-TCCCCAT- 3' |
Rnf151 | mmu-miR-539 | beg:154 | end:176 | pic:3' TGTGTGGTTCCTA-TTAAAGAGG 5'& ||| || .||||||| &5' ---CACTGAGACAGGATTTCTC- 3' |
Rnf151 | mmu-miR-540-3p | beg:171 | end:189 | pic:3' GGTCCTAGCTG--GAGACTGGA 5'& |||. |||||.|. &5' ------TCGGTAGCTCTGGCT- 3' |
Rnf151 | mmu-miR-540-3p | beg:20 | end:40 | pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||||| .|.|| | |||| &5' CCAGGCCTGGCC-C--ACCT 3' |
Rnf151 | mmu-miR-546 | beg:184 | end:198 | pic:3' CTGAGGCACGGTGGTA 5'& |.|||.||||| &5' ----CTGTGTCACCA- 3' |
Rnf151 | mmu-miR-673-3p | beg:105 | end:131 | pic:3' CCAC-GTGTCTTGAGTC--GGGGCCT 5'& | ||| | ||. |||.||| &5' ---GACACTGCCCTTTCTTCCCTGGA 3' |
Rnf151 | mmu-miR-677 | beg:228 | end:250 | pic:3' AGTCTTCGA-TTAG-TAGTGACTT 5'& .|.| .||| ||||||||| &5' -----GGTTAGATCTATCACTGAA 3' |
Rnf151 | mmu-miR-677 | beg:0 | end:22 | pic:3' AGTCTTCGATTAGTA-GTGACTT 5'& ||.||.||| ||||||| &5' --AGGAGTTAAATAAACACTGAA 3' |
Rnf151 | mmu-miR-705 | beg:24 | end:46 | pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||.. |||||||| |||| &5' -GCCTGGCCCACCTCACACC 3' |
Rnf151 | mmu-miR-711 | beg:293 | end:313 | pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& .||||||| .|||||.| &5' -----GTCTCTCCATGGGTCTC 3' |
Rnf151 | mmu-miR-744 | beg:73 | end:94 | pic:3' ACGACAATCGGGATC----GGGGCGT 5'& |.||| |||.||| &5' --------GTCCTTGTCATCCCTGCA 3' |
Rnf151 | mmu-miR-744 | beg:242 | end:266 | pic:3' ACGACA-ATCGGGATCGGGGCGT 5'& ||| |||.|| .||.||| &5' --CTGAATAGTCCCCATCCTGCA 3' |
Rnf151 | mmu-miR-763 | beg:336 | end:351 | pic:3' CGGTGACCAAGAAGGGTCGACC 5'& |||||.|||||| &5' ----------CTTCCTAGCTGG 3' |
Rnf151 | mmu-miR-764-3p | beg:291 | end:315 | pic:3' TGTCAACGGTGATA---CCGGAGGA 5'& |||.| || ||.||||| &5' ----TTGTCTCTCCATGGGTCTCCT 3' |
Rnf151 | mmu-miR-871 | beg:228 | end:252 | pic:3' GTACTGACCGT----GATTA-GACTTAT 5'& ||. ||| ||||||| &5' -------GGTTAGATCTATCACTGAATA 3' |
Rnf151 | mmu-miR-92astar | beg:186 | end:208 | pic:3' CATTACGGTGGTTA-GGGGTGGA 5'& .||.||||| ||||||| &5' ---GTGTCACCACCACCCCACC- 3' |
Rnf151 | mmu-miR-882 | beg:294 | end:304 | pic:3' TGATTACGCGATTGAGAGAGGA 5'& ||||||| &5' --------------TCTCTCC- 3' |
Rnf151 | mmu-miR-455 | beg:121 | end:135 | pic:3' CACATATACGGGCACCTGACG 5'& ||| |||||||. &5' ---------CCC-TGGACTGT 3' |
Rnf151 | mmu-miR-191 | beg:65 | end:77 | pic:3' GTCGACGAAAACCCTAAGGCAAC 5'& .|||||||| &5' --------------GTTCCGTTG 3' |