DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT578904 mmu-miR-409-3p Mus musculus Epn3 71889 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004538 mmu-miR-10b* 71889 Epn3 auaaggggaUCUUAGCUUAGAc ||| | |||||| gccuaauaaAGACUGGAAUCUa 2 14 139 160 [mm9:11:94352305-94352326:-] 0.5477 125 6 -11.30 -0.1301 MIMAT0004187 mmu-miR-744 71889 Epn3 acGACAAUCGGGAUCGGGGCGu ||| | | |||||||| gcCUGCGCG-CGAAGCCCCGCc 2 21 12 32 [mm9:11:94352433-94352453:-] 0.4416 146 7 -22.78 -0.1803 MIMAT0004189 mmu-miR-693-3p 71889 Epn3 aaUGUCGGUGUAGACUUUC-GACg ||| ||:| | |||| ||| cuACACCCGCCUAAUAAAGACUGg 2 22 131 154 [mm9:11:94352311-94352334:-] 0.5477 125 0 -13.64 -1.1785 MIMAT0004837 mmu-miR-615-5p 71889 Epn3 cuaGGCUCGUGGC----C-CCUGGGGg ::||||||:| | ||||||| aggUUGAGCACUGAUCUGUGGACCCCc 2 20 53 79 [mm9:11:94352386-94352412:-] 0.4098 153 7 -35.08 -0.1909 MIMAT0005849 mmu-miR-1191 71889 Epn3 aucccgauguaucaUUCUGAc |||||| acacccgccuaauaAAGACUg 2 8 133 153 [mm9:11:94352312-94352332:-] 0.5477 120 6 -10.59 -0.1056 MIMAT0009403 mmu-miR-1939 71889 Epn3 cacguaaccgucCCUUAGcu |||||| cuaauaaagacuGGAAUCua 3 9 141 160 [mm9:11:94352305-94352324:-] 0.5477 120 0 -5.88 -0.1066 MIMAT0009433 mmu-miR-1960 71889 Epn3 ucgggagaagauugUCGUGACc ||||||| gaucgugcagguugAGCACUGa 2 9 45 66 [mm9:11:94352399-94352420:-] 0.4098 140 7 -10.46 -0.1212 MIMAT0011208 mmu-miR-2132 71889 Epn3 guagcgCAGUUGUGGGCGg | | |||||||| gacgaaGACUACACCCGCc 2 14 123 141 [mm9:11:94352324-94352342:-] 0.5369 149 7 -23.56 -0.8136 MIMAT0000157 mmu-miR-145 71889 Epn3 ucccuaaggacccUUUUGACCUg ||:|||||| cacccgccuaauaAAGACUGGAa 2 11 134 156 [mm9:11:94352309-94352331:-] 0.5477 134 6 -15.96 -0.1330

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G055226 Epn3 Mus musculus 71889

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Epn3 mmu-miR-2132 beg:122 end:142 pic:3' GTAGCGCAGT-TGTGGGCGG 5'& || ||||||||| &5' ---CGAAGACTACACCCGCC 3' Epn3 mmu-miR-1945 beg:8 end:26 pic:3' CAGGGCTGTCATGGGCGCTTCT 5'& || | |.| ||||||| &5' ----CG-CC-TGCGCGCGAAG- 3' Epn3 mmu-miR-688 beg:5 end:19 pic:3' CTTATTCATCAGCGGACGCT 5'& ||| |||||||| &5' -------TAG-CGCCTGCG- 3' Epn3 mmu-miR-139-5p beg:55 end:75 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| ||| || ||||.|| &5' ---GAG-CAC-TGATCTGTGGA 3' Epn3 mmu-miR-145 beg:137 end:156 pic:3' TCCCTAAGGACCC-TTTTGACCTG 5'& ||| ||.|||||| &5' -------CCTAATAAAGACTGGA- 3' Epn3 mmu-miR-152 beg:46 end:67 pic:3' GGTTCAAGA-CAGTACGTGACT 5'& || ||.. ||||||| &5' ----GTGCAGGTTGAGCACTGA 3' Epn3 mmu-miR-1970 beg:64 end:87 pic:3' GTTTCGGATA---GGGGTCACTGTGT 5'& .||.| |||| ||||||| &5' -----TCTGTGGACCCCC-TGACACA 3' Epn3 mmu-miR-2861 beg:8 end:30 pic:3' GGCGGGCG-GCGGTCCGGGG 5'& ||||.|| ||| | ||||| &5' -CGCCTGCGCGCGAAGCCCC 3' Epn3 mmu-miR-30astar beg:136 end:157 pic:3' CGACGT-TTGTAGGCTGACTTTC 5'& || ||.| |||||.|| &5' ---GCCTAATAAA-GACTGGAA- 3' Epn3 mmu-miR-30estar beg:136 end:157 pic:3' CGACATTTGTAGGCTGACTTTC 5'& || ||.| |||||.|| &5' GCCT--AATAAA-GACTGGAA- 3' Epn3 mmu-miR-615-5p beg:57 end:80 pic:3' CTAGGCTCGTGGC----C-CCTGGGGG 5'& ||||||.| | |||||||| &5' -----GAGCACTGATCTGTGGACCCCC 3' Epn3 mmu-miR-764-5p beg:46 end:65 pic:3' TCCTCCTGTAC-ACTCGTGG 5'& | || |||||||. &5' ----GTGCAGGTTGAGCACT 3' Epn3 mmu-miR-599 beg:70 end:87 pic:3' CAAACTATTTGACTGTGTT 5'& || |||||||| &5' ----GACCCCCTGACACA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Epn3 RAID00244203 mmu-miR-466k miRNA MIMAT0005845 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00336444 mmu-miR-1968-3p miRNA MIMAT0017350 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00366030 mmu-miR-5710 miRNA MIMAT0022505 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00390454 mmu-miR-6991-3p miRNA MIMAT0027885 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00561424 mmu-miR-3110-5p miRNA MIMAT0014951 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00641341 mmu-miR-6346 miRNA MIMAT0025089 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00670911 mmu-miR-744-5p miRNA MIMAT0004187 Epn3 mRNA 71889 Prediction 0.2202 Epn3 RAID00731189 mmu-miR-7223-3p miRNA MIMAT0028415 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00819593 mmu-miR-3085-3p miRNA MIMAT0014879 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00820207 mmu-miR-6954-5p miRNA MIMAT0027808 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00877372 mmu-miR-18a-5p miRNA MIMAT0000528 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID00955053 mmu-miR-761 miRNA MIMAT0003893 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01049014 mmu-miR-145a-5p miRNA MIMAT0000157 Epn3 mRNA 71889 Prediction 0.2202 Epn3 RAID01159884 mmu-miR-486a-3p miRNA MIMAT0017206 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01188783 mmu-miR-3064-5p miRNA MIMAT0014834 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01248563 mmu-miR-7053-3p miRNA MIMAT0028011 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01300986 mmu-miR-7035-5p miRNA MIMAT0027974 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01485609 mmu-miR-326-5p miRNA MIMAT0017027 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01493669 mmu-miR-6989-3p miRNA MIMAT0027881 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01579760 mmu-miR-214-3p miRNA MIMAT0000661 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01637973 mmu-miR-615-5p miRNA MIMAT0004837 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01683116 mmu-miR-6918-5p miRNA MIMAT0027736 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01709562 mmu-miR-7681-3p miRNA MIMAT0029883 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01799972 mmu-miR-7656-3p miRNA MIMAT0029819 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01886288 mmu-miR-758-3p miRNA MIMAT0003889 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01892768 mmu-miR-7016-3p miRNA MIMAT0027937 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID01956838 mmu-miR-6950-5p miRNA MIMAT0027800 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02041010 mmu-miR-5125 miRNA MIMAT0020635 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02165794 mmu-miR-1224-5p miRNA MIMAT0005460 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02219133 mmu-miR-7052-3p miRNA MIMAT0028009 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02467079 mmu-miR-409-3p miRNA MIMAT0001090 Epn3 mRNA 71889 CLIP-seq 0.5483 Epn3 RAID02533808 mmu-miR-466i-5p miRNA MIMAT0017325 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02615270 mmu-miR-466d-5p miRNA MIMAT0004930 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02630253 mmu-miR-217-5p miRNA MIMAT0000679 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02829625 mmu-miR-5107-5p miRNA MIMAT0020615 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02830260 mmu-miR-6958-3p miRNA MIMAT0027817 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID02857226 mmu-miR-6350 miRNA MIMAT0025093 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03087510 mmu-miR-7680-5p miRNA MIMAT0029874 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03105168 mmu-miR-7087-3p miRNA MIMAT0028081 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03309360 mmu-miR-486b-3p miRNA MIMAT0014944 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03500117 mmu-miR-6354 miRNA MIMAT0025097 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03543199 mmu-miR-7049-3p miRNA MIMAT0028003 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03757805 mmu-miR-7687-5p miRNA MIMAT0029902 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03763665 mmu-miR-599 miRNA MIMAT0012772 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03799419 mmu-miR-3544-3p miRNA MIMAT0022354 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03880246 mmu-miR-7679-5p miRNA MIMAT0029872 Epn3 mRNA 71889 Prediction 0.1828 Epn3 RAID03995658 mmu-miR-18b-5p miRNA MIMAT0004858 Epn3 mRNA 71889 Prediction 0.2202