Rnf166
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Rnf166ATTTA48-7611199-1203;1332-1336
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT581296mmu-miR-200b-3pMus musculusRnf16668718Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT581298mmu-miR-200c-3pMus musculusRnf16668718Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT581293mmu-miR-410-3pMus musculusRnf16668718Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT581297mmu-miR-429-3pMus musculusRnf16668718Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT581294mmu-miR-344d-3pMus musculusRnf16668718Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
MIRT581295mmu-miR-344e-3pMus musculusRnf16668718Mus musculusHITS-CLIPFunctional MTI (Weak)25083871
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000217mmu-miR-188-5p68718Rnf166ggGAGGUGGUACGUUCCCUAc |||| | | :||||||| caCUCC-CGCUUUAAGGGAUa2204160[mm9:8:124991009-124991028:-]0.35371537-21.76-0.1616
MIMAT0004541mmu-miR-188-3p68718Rnf166acguuugggacGUACACCCUc ||||||||| aaaaucaaaaaCAUGUGGGAu211598618[mm9:8:124990451-124990471:-]0.53891507-18.37-0.8032
MIMAT0004541mmu-miR-188-3p68718Rnf166acguuugGGACGUACACC-CUc :|||::||||| || cuuggugUCUGUGUGUGGAGAa215290311[mm9:8:124990758-124990779:-]0.45601220-17.63-0.1767
MIMAT0000240mmu-miR-20768718Rnf166cucccuccuCUCGGUCCUCUUCg | |: ||||||| uuggugucuGUGUGUGGAGAAGg215291313[mm9:8:124990756-124990778:-]0.45601427-13.98-0.1138
MIMAT0004583mmu-miR-130b*68718Rnf166ucaucacguugucccUUUCUCa |||||| auugcugucuuuucaAAAGAGu28975996[mm9:8:124990073-124990094:-]0.54901206-7.63-0.1218
MIMAT0004631mmu-miR-29a*68718Rnf166gacuuguggUUUUCUUUAGUca |||| |||||| auuuuuaaaAAAAAAAAUCAaa314585606[mm9:8:124990463-124990484:-]0.53891370-5.66-0.1604
MIMAT0000549mmu-miR-322*68718Rnf166cacaacgUCGCGAAGUACAAa | | :|||||||| ugugauaAUCUUUUCAUGUUu215472492[mm9:8:124990577-124990597:-]0.67481507-11.67-1.1392
MIMAT0000593mmu-miR-34468718Rnf166ugucAGUCCGAAACCGAUCUAGu ||| |:||| ||||| | cuuuUCAUGUUUU--CUAGAGCa220481501[mm9:8:124990568-124990588:-]0.70281280-10.61-0.1078
MIMAT0000595mmu-miR-345-5p68718Rnf166uuCGUGACCUGAUCCCCAGUCg |::|||| | ||||||| aaGUGCUGGCCAUUGGGUCAGa221246267[mm9:8:124990802-124990823:-]0.45601607-24.40-0.1304
MIMAT0000605mmu-miR-35068718Rnf166cuuucaCAU-ACCCGAAACACUu ||| ||| :||||||| cauuugGUACUGGCUUUUGUGAu217415437[mm9:8:124990632-124990654:-]0.64681597-15.88-0.7428
MIMAT0004666mmu-miR-33*68718Rnf166cacuacgugacaCCUUUGUAAc | ||||||| caggucaggcaaGAAAACAUUu211924945[mm9:8:124990124-124990145:-]0.49811427-6.84-0.4533
MIMAT0004670mmu-miR-7a*68718Rnf166auACCGUCUGACACUAA-ACAAc || ||| | | ||| |||| uuUGUCAGCAUCUUAUUCUGUUc221943965[mm9:8:124990104-124990126:-]0.49811240-3.46-0.8273
MIMAT0004781mmu-miR-532-3p68718Rnf166acGUUCGGAACC-----CACAC-CCUCc | || ||||| ||||| |||| ucCCAGACUUGGUGUCUGUGUGUGGAGa221283310[mm9:8:124990759-124990786:-]0.45601230-21.19-0.1679
MIMAT0003731mmu-miR-671-5p68718Rnf166gaggucGGGGAG---GUCCC-GAAGGa |:|||| ||||| ||||| gcauccCUCCUCAGGCAGGGACUUCCc218851877[mm9:8:124990192-124990218:-]0.49811280-28.89-0.1691
MIMAT0003898mmu-miR-76068718Rnf166aggGGUGUCUGGGUCUCGGc :||| :|||||||| cugUCAC-CUUCCAGAGCCa218829847[mm9:8:124990222-124990240:-]0.49811477-22.51-0.2461
MIMAT0003467mmu-miR-68868718Rnf166cuuauucaucagcGGACGCu |||||| gauauuuaggaacCCUGCGu28435454[mm9:8:124990615-124990634:-]0.64681206-14.86-0.1453
MIMAT0003474mmu-miR-69468718Rnf166gaagUCCGUUGUAAAAGUc | |: |:|||||:| uacaAAGUUAUAUUUUUAa216574592[mm9:8:124990477-124990495:-]0.62261350-5.06-0.2083
MIMAT0003474mmu-miR-69468718Rnf166gaAGUCCG-----UUGUAAA-AGUc |||||| ||||||| ||| ggUCAGGCAAGAAAACAUUUGUCAg218926950[mm9:8:124990119-124990143:-]0.49811240-20.27-0.4546
MIMAT0003493mmu-miR-70368718Rnf166aaGAAAG-GAAGACUUC-CAAAa || || :||| ||| |||| ugCUGUCUUUUCAAAAGAGUUUu220977999[mm9:8:124990070-124990092:-]0.56321220-10.31-1.0964
MIMAT0003781mmu-miR-676*68718Rnf166cgUUCAGGAUUCCAACAUCUCa | || | | ||||||| acAUGUGGGAUGAGUGUAGAGg221608629[mm9:8:124990440-124990461:-]0.45511447-14.05-0.1082
MIMAT0004237mmu-miR-74268718Rnf166aaaugggUCGU--ACC---ACCGAAAg |||| ||| ||||||| caccgugAGCAUUUGGUACUGGCUUUu216406432[mm9:8:124990637-124990663:-]0.59331457-17.77-0.5597
MIMAT0004238mmu-miR-743a68718Rnf166agaUGAGUCGAACCACAGAAAg :| :| ||| ||||||| augGCAUAAAUUGCUGUCUUUu220966987[mm9:8:124990082-124990103:-]0.52361557-11.06-0.4238
MIMAT0004840mmu-miR-743b-3p68718Rnf166agAUAAGU--CGU-----ACUACAGAAAg |:|||| ||| || ||||||| ucUGUUCAUGGCAUAAAUUGCUGUCUUUu221959987[mm9:8:124990082-124990110:-]0.52361507-17.95-0.4270
MIMAT0004844mmu-miR-88068718Rnf166agaUGAGUCUCUCCUACCUCAu :| |||| || ||||||| acaGCCCAGACAGAAUGGAGUc220794815[mm9:8:124990254-124990275:-]0.47391677-18.06-0.1099
MIMAT0004844mmu-miR-88068718Rnf166agaugagucucuccUACCUCau |||||| agagcaguauuuuuAUGGAGca39550571[mm9:8:124990498-124990519:-]0.66271200-11.27-0.4802
MIMAT0004849mmu-miR-883a-3p68718Rnf166uaugacucucgacaaCGUCAAu |||||| uagagcaaagacaaaGCAGUUa28495516[mm9:8:124990553-124990574:-]0.70281206-12.65-0.1301
MIMAT0004851mmu-miR-883b-3p68718Rnf166uaugacucucuacaaCGUCAAu |||||| uagagcaaagacaaaGCAGUUa28495516[mm9:8:124990553-124990574:-]0.70281206-12.60-0.1289
MIMAT0005833mmu-miR-669d68718Rnf166uguauaugUACGUGUGUGUUCa |||: :||||||| caaguggaAUGU-UACACAAGg215113133[mm9:8:124990936-124990956:-]0.43551487-14.49-0.2148
MIMAT0009393mmu-miR-193068718Rnf166ugCGACGUCCAUGAUACCUCca || |:| | :||||||| gaGCAGUA-UUUUUAUGGAGca321551571[mm9:8:124990498-124990518:-]0.66271340-16.03-0.4735
MIMAT0009431mmu-miR-195868718Rnf166ugaAUG-ACGAAGGU-GAA-AGGAu |:| | :|||:| ||| |||| cccUGCGUUUUUCUAUCUUAUCCUg220447471[mm9:8:124990598-124990622:-]0.64681210-15.24-0.8545
MIMAT0011221mmu-miR-214568718Rnf166uugguccgggcUGGGACGa ||||||| gauauuuaggaACCCUGCg29435453[mm9:8:124990616-124990634:-]0.64681407-17.92-0.9715
MIMAT0015640mmu-miR-3470a68718Rnf166ggucggaccAGAUGUUUCAcu |:|||||||| uauggagcaUUUACAAAGUua313563583[mm9:8:124990486-124990506:-]0.66271360-12.21-0.6020
MIMAT0000148mmu-miR-13668718Rnf166gguaguaguuuuguuUACCUCa |||||| aagagcaguauuuuuAUGGAGc28549570[mm9:8:124990499-124990520:-]0.66271206-11.99-0.3662
MIMAT0000165mmu-miR-15568718Rnf166uggggAUAGUGUUA-AUCGUAAuu |||: : || |||||| agcagUAUUUUUAUGGAGCAUUua319552575[mm9:8:124990494-124990517:-]0.66271290-8.91-0.1625
MIMAT0000233mmu-miR-200b68718Rnf166aguaguaauggUC-CGUCAUAAu || |||||||| uuugacuaggaAGAGCAGUAUUu212539561[mm9:8:124990508-124990530:-]0.70281467-14.37-0.8731
MIMAT0000380mmu-miR-302a68718Rnf166aguggUUUUGU--ACCUUCGU-GAAu |||||| || |||| ||| gcaagAAAACAUUUGUCAGCAUCUUa219932957[mm9:8:124990112-124990137:-]0.49811250-14.86-0.8057
MIMAT0000565mmu-miR-32868718Rnf166ugccUUCCCGUCUC------UCCCGGUc |: ||:|||| ||||||| uaccAGUGGUAGAGCCCUCAAGGGCCAg219879906[mm9:8:124990163-124990190:-]0.49811457-28.71-0.1066
MIMAT0000590mmu-miR-342-3p68718Rnf166ugcccacgcuaAAGACACACUcu | |||||||| uuucuaucuuaUCCUGUGUGAua313456478[mm9:8:124990591-124990613:-]0.64681320-11.85-0.1522
MIMAT0000657mmu-miR-200c68718Rnf166agguaguaaugggcCGUCAUAAu |||||||| uuugacuaggaagaGCAGUAUUu210539561[mm9:8:124990508-124990530:-]0.70281457-10.75-0.8731
MIMAT0000670mmu-miR-22268718Rnf166uggGUCAUCGGUCUACAUCGa ||||| :: ||| ||| gagCAGUAUUUUUAUGGAGCa219551571[mm9:8:124990498-124990518:-]0.66271260-11.72-0.1671
MIMAT0000741mmu-miR-37768718Rnf166uguuuucAACGGAAACACACUa || :| ||||||| uucuaucUUAUC-CUGUGUGAu216457477[mm9:8:124990592-124990612:-]0.64681417-12.19-0.8763
MIMAT0001076mmu-miR-384-3p68718Rnf166uaacacuugUUAAA--GAUCCUUa ::||| ||||||| caauacccaGGUUUGACUAGGAAg214528551[mm9:8:124990518-124990541:-]0.70281447-12.31-0.8526
MIMAT0001091mmu-miR-41068718Rnf166uguccgguagacaCAAUAUAa ||||||| gagcauuuacaaaGUUAUAUu29567587[mm9:8:124990482-124990502:-]0.62261407-8.26-1.2716
MIMAT0001537mmu-miR-42968718Rnf166ugCCGUAAUGGUC-----UGUCAUAAu ||: | ||:|| :||||||| caGGUUUGACUAGGAAGAGCAGUAUUu221535561[mm9:8:124990508-124990534:-]0.70281477-16.97-0.8731
MIMAT0003168mmu-miR-54368718Rnf166uucuUCACGUGGCGCUUACAAa || || ||||||| caccAGGCCAAGUGGAAUGUUa219105126[mm9:8:124990943-124990964:-]0.43551427-11.06-0.1196
MIMAT0003374mmu-miR-302b68718Rnf166gaugaUUUUGU--ACCUUCGU-GAAu |||||| || |||| ||| gcaagAAAACAUUUGUCAGCAUCUUa219932957[mm9:8:124990112-124990137:-]0.49811250-11.81-0.8057
MIMAT0003780mmu-miR-49068718Rnf166gucGUA-CCUCAGGAGGUCCAAc :|| | | | | ||||||| uucUAUCGCAAUAC-CCAGGUUu220520541[mm9:8:124990528-124990549:-]0.70281447-11.78-0.7413
MIMAT0004889mmu-miR-50468718Rnf166cuaucUCACGUCUGGU--CCCAGa ||||| |:||| ||||| gggcaAGUGCUGGCCAUUGGGUCa218242265[mm9:8:124990804-124990827:-]0.45601210-24.06-0.1027
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G067150Rnf166Mus musculus6871823398480
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Rnf166mmu-miR-135abeg:669end:688pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& .|.| |||||||. &5' ----GTGGCGTCCCCAAGCCATG 3'
Rnf166mmu-miR-188-5pbeg:43end:60pic:3' GGGAGGTGGTACGTTCCCTAC 5'& ||.|. .||||||| &5' ----CCGCTT--TAAGGGAT- 3'
Rnf166mmu-miR-136beg:797end:815pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& ||.| .|||||||| &5' -------CAGACAGAATGGAGT 3'
Rnf166mmu-miR-669dbeg:118end:133pic:3' TGTATATGTACGTGTGTGTTCA 5'& |||. .||||||| &5' --------ATGT-TACACAAG- 3'
Rnf166mmu-miR-2145beg:437end:453pic:3' TTGGTCCGGGCTGGGACGA 5'& ..||| ||||||| &5' --TTAGGA---ACCCTGC- 3'
Rnf166mmu-miR-710beg:277end:295pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& ||.|||| |||||||| &5' -----CTTTCCC--AGACTTGG 3'
Rnf166mmu-miR-574-5pbeg:28end:46pic:3' TGTGTGAGTGTG-TGTGTGTGAGT 5'& .|| | |||||||| &5' --------GCAGAAGACACACTC- 3'
Rnf166mmu-miR-331-3pbeg:337end:351pic:3' AAGATCCTATCCGGGTCCCCG 5'& ||| ||||||| &5' ---------AGGGCCAGGGG- 3'
Rnf166mmu-miR-327beg:890end:901pic:3' TAGGAGTACGGGGAGTTCA 5'& |||||||| &5' ----------CCCTCAAG- 3'
Rnf166mmu-miR-181a-2starbeg:371end:391pic:3' GTTCCATGTCA-GTT-GCCAGCCA 5'& ||| || |||||||| &5' -------CAGCCCACCCGGTCGGT 3'
Rnf166mmu-miR-542-3pbeg:826end:836pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||||| &5' --------------CTGTCAC- 3'
Rnf166mmu-miR-543beg:108end:126pic:3' TTCTTCACGTGGCG-CTTACAAA 5'& || |. ||||||| &5' -------GCCAAGTGGAATGTT- 3'
Rnf166mmu-miR-207beg:611end:637pic:3' CTCCCTCCTCTCGG--TCCTCTTCG 5'& |||| ||| |. .||||.||| &5' --GGGATGAGTGTAGAGGGAGGAGC 3'
Rnf166mcmv-miR-m108-2-5p.1beg:259end:280pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& || |. | | |||.|.|| &5' -GG-GTCAGAG-CAGGTGGCTGC 3'
Rnf166mcmv-miR-M23-2beg:878end:899pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || ||. || ||||.|| &5' CCAG-TGGTAGA-GCCCTCA- 3'
Rnf166mcmv-miR-M87-1beg:259end:282pic:3' CGACGGCGACGGCTGCCGACGGA 5'& |.| || | |||||||| &5' ---GTCAGAGCAGGTGGCTGCCT 3'
Rnf166mcmv-miR-M87-1beg:354end:375pic:3' CGACGGCGACGGCTGCCGACGGA 5'& | |||| | ||| ||||||| &5' GGTGCC-CAGCCAA-GGCTGCC- 3'
Rnf166mcmv-miR-M87-1beg:757end:779pic:3' CGACGGCG-ACGGCTGCCGACGGA 5'& ||| | |||.| .||||||. &5' ---GCCACTTGCTG-TGGCTGCT- 3'
Rnf166mghv-miR-M1-7-5pbeg:267end:287pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& |||| .|.|| |.|.| || &5' AGGTGGCTGC-CTTTC-CC--- 3'
Rnf166mmu-miR-105beg:404end:428pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& |||. |||||.|| |.|| ||| &5' ACCGTGAGCATTTG-GTAC-TGG 3'
Rnf166mmu-miR-105beg:208end:233pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& .||| |||| |||.|| || || &5' GCCAGCAGCA-CTGGGCCCTCGG 3'
Rnf166mmu-miR-1188beg:205end:223pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||||| |||.| .|||. &5' TCCTGG-CCAGCA--GCACT- 3'
Rnf166mmu-miR-122beg:26end:47pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& ...|| | |||||||| &5' -GGGCAGAAGA--CACACTCC- 3'
Rnf166mmu-miR-1224beg:846end:864pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& ||.| |||| |||||| &5' --CCGCATCCC---TCCTCA- 3'
Rnf166mmu-miR-124starbeg:401end:418pic:3' TAGTTCCAGGCGACACTTGTGC 5'& ||| | ||||.||. &5' -------TCCACCGTGAGCAT- 3'
Rnf166mmu-miR-127starbeg:220end:240pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |.|||||| | |||||| &5' ----GGGCCCTCGGTGCTTCA- 3'
Rnf166mmu-miR-1306beg:828end:850pic:3' GTAGTGGT-GGTCTCGGTTGCA 5'& .||||| ||||||||||| &5' -GTCACCTTCCAGAGCCAAC-- 3'
Rnf166mmu-miR-130bstarbeg:335end:356pic:3' TCATCACGTT---GTCCCTTTCTCA 5'& |||. |||||.||||| &5' ------GCAGGGCCAGGGGAAGAG- 3'
Rnf166mmu-miR-154starbeg:461end:478pic:3' TTATCCAGTTGGCACATACTAA 5'& |.| || |||.|||| &5' ------TTATCC-TGTGTGAT- 3'
Rnf166mmu-miR-181abeg:629end:645pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& |. |||| ||..||| &5' -------GG-AGCG-TGGGTGT- 3'
Rnf166mmu-miR-181bbeg:794end:813pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .|||| ||||| ||||.| &5' GCCCA--GACAG-AATGGA---- 3'
Rnf166mmu-miR-181bbeg:599end:625pic:3' TGGGTGGCTGT---CGTTACTTACAA 5'& .|| ||| | .||||.||| &5' --TCAAAAACATGTGGGATGAGTGT- 3'
Rnf166mmu-miR-181dbeg:794end:813pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .|||| ||||. ||||.| &5' GCCCA--GACAG-AATGGA---- 3'
Rnf166mmu-miR-188-3pbeg:596end:618pic:3' ACGTTTGGGAC--GTACACCCTC 5'& |||.| ||||||||| &5' ---AAATCAAAAACATGTGGGA- 3'
Rnf166mmu-miR-188-5pbeg:852end:872pic:3' GGGAGGTGGTACGTTCCCTAC 5'& |||||| .|| || ||||| &5' CCCTCC-TCAGGC-AGGGA-- 3'
Rnf166mmu-miR-18astarbeg:24end:35pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |.|||||| &5' -------------TGGGGCAG- 3'
Rnf166mmu-miR-18bbeg:938end:958pic:3' GATTGTCGTGATCTA-CGTGGAAT 5'& ||.| | |||.|||| &5' -------CATTTGTCAGCATCTTA 3'
Rnf166mmu-miR-1903beg:336end:357pic:3' ACAGAGTCCT--TCTTCTTCTTCC 5'& ||||. ||..|||||.| &5' -----CAGGGCCAGGGGAAGAGG- 3'
Rnf166mmu-miR-1904beg:17end:37pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& ||||. ||.|||||| &5' ----CCTCTTATGGGGCAGAA- 3'
Rnf166mmu-miR-192beg:247end:267pic:3' CCGACA-GTTAAGTATCCAGTC 5'& |||| || |.|||||| &5' -GCTGGCCAT----TGGGTCAG 3'
Rnf166mmu-miR-1929beg:482end:506pic:3' GAG-ACGAGATATTTCAGGATCTT 5'& || ||.|.| ||.|| | ||| &5' -TCATGTTTTCTAGAG-CAAAGA- 3'
Rnf166mmu-miR-1941-3pbeg:154end:165pic:3' TACCCTCTATGACGATTCTAC 5'& |||..||| &5' ------------GCTGGGAT- 3'
Rnf166mmu-miR-194beg:53end:71pic:3' AGGTGTACCTCAA-CGACAATGT 5'& ||| ||||||.| &5' -------GGATAGGGCTGTTGC- 3'
Rnf166mmu-miR-1948beg:707end:731pic:3' GACATGCTCACGAGAC-GGATTT 5'& |||| | .|||||.| |.|.| &5' CTGT-CTGGTGCTTTCTCTTGA- 3'
Rnf166mmu-miR-1953beg:266end:287pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |||. | ||| |||||||| &5' CAGGTGGCTGC---CTTTCCCA 3'
Rnf166mmu-miR-1953beg:709end:727pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.||| | .|||||.| &5' -----GTCTG-GTGCTTTCTC- 3'
Rnf166mmu-miR-1957beg:482end:501pic:3' CAGTATACGAGATGGTGAC 5'& ||||.| .|||| .| &5' -TCATGTTTTCTAGAGC-- 3'
Rnf166mmu-miR-1960beg:201end:225pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .|.||| | |.||||||||| &5' GGTCCTGG-CCAGCAGCACTGG 3'
Rnf166mmu-miR-1969beg:443end:466pic:3' TGGGTA-CAATTTCAGAGGTAGAA 5'& |||| ||| |.||.||||| &5' ACCCTGCGTT----TTTCTATCTT 3'
Rnf166mmu-miR-1982starbeg:271end:286pic:3' GGAGGGGTCC--TGG-GAGGGTT 5'& || .|| .||||| &5' --------GGCTGCCTTTCCCA- 3'
Rnf166mmu-miR-199bstarbeg:207end:225pic:3' CTTGTCCA-TCAGATTTGTGACCC 5'& || || | |.||||||| &5' -----GGCCAG-C--AGCACTGGG 3'
Rnf166mmu-miR-200bbeg:540end:561pic:3' AGTAGTAATGGTC-----CGTCATAAT 5'& ||.|| |||||||| &5' --------ACTAGGAAGAGCAGTATT- 3'
Rnf166mmu-miR-200cbeg:540end:561pic:3' AGGTAGTAATGGG----C-CGTCATAAT 5'& ||. | |||||||| &5' ---------ACTAGGAAGAGCAGTATT- 3'
Rnf166mmu-miR-207beg:334end:354pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& || ||.||||||.|||| &5' -----AGCAGGGCCAGGGGAAG- 3'
Rnf166mmu-miR-207beg:297end:313pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& | |. ||||||| &5' ---------GTGTGTGGAGAAG- 3'
Rnf166mmu-miR-211beg:611end:633pic:3' TCCGTTTCCTACT---GTTTCCCTT 5'& .|||||| .|.|||||. &5' ------GGGATGAGTGTAGAGGGAG 3'
Rnf166mmu-miR-214beg:703end:726pic:3' TGACGGACAGA-CACGGACGACA 5'& .|| ||||||| ||||.| || &5' GCT-CCTGTCTGGTGCTTTCT-- 3'
Rnf166mmu-miR-2141beg:826end:840pic:3' TTGAAAAGACTGTGGAGGA 5'& ||| |||||.| &5' -------CTGTCACCTTC- 3'
Rnf166mmu-miR-214starbeg:654end:672pic:3' CGTGTCGTTCACATCTGTCCGT 5'& |. |||| ||||||. &5' -----GTCTGTGT-GACAGGT- 3'
Rnf166mmu-miR-215beg:910end:931pic:3' CAGACAGTTTAGTATCCAGTA 5'& ||| ..| . |||||| &5' --CTGCTTGGTGGCAGGTCA- 3'
Rnf166mmu-miR-219beg:467end:482pic:3' TCTTAACGCAAACCTGTTAGT 5'& ||.|| ||.|||| &5' -----TGTGT---GATAATC- 3'
Rnf166mmu-miR-24beg:209end:228pic:3' GACAAGGACGACTTGACTCGGT 5'& || || | ||||.||| &5' -----CCAGCAGCACTGGGCC- 3'
Rnf166mmu-miR-27astarbeg:205end:230pic:3' ACGAGTGTTCGTCG--ATTCGGGA 5'& || .| |||||| |..||||| &5' --CTGGCCAGCAGCACTGGGCCCT 3'
Rnf166mmu-miR-28starbeg:699end:720pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& .| |||| | .|||.||| &5' ---GGTGGCTC-CTGTCTGGTG 3'
Rnf166mmu-miR-294beg:563end:575pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& |.||||.|| &5' ------------GGAGCATTT- 3'
Rnf166mmu-miR-29bbeg:712end:722pic:3' TTGTGACTAAAGTTTACCACGAT 5'& ||||||| &5' ---------------TGGTGCT- 3'
Rnf166mmu-miR-29cbeg:712end:722pic:3' ATTGGCTAAAGTTTACCACGAT 5'& ||||||| &5' --------------TGGTGCT- 3'
Rnf166mmu-miR-302abeg:560end:576pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& .|||| ||||.||| &5' ---------TATGG-AGCATTTA 3'
Rnf166mmu-miR-302bbeg:554end:576pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||.| .|||| ||||.||| &5' -TATTTT--TATGG-AGCATTTA 3'
Rnf166mmu-miR-30c-2starbeg:268end:289pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& .|| ..| ||| |.|||||| &5' --GGT-GGCTGCC-TTTCCCAG 3'
Rnf166mmu-miR-326beg:835end:844pic:3' TGACCTCCTTCCCGGGTCTCC 5'& .|||||| &5' -------------TCCAGAG- 3'
Rnf166mmu-miR-327beg:224end:242pic:3' TAGGAGTACGGGGAGTTCA 5'& ||||. |. |.||||| &5' --CCTCG-GTGCTTCAAG- 3'
Rnf166mmu-miR-327beg:846end:866pic:3' TAGGAGTACGG-GGAGTTCA 5'& || ||| || |||||.| &5' --CCGCATCCCTCCTCAGG- 3'
Rnf166mmu-miR-328beg:883end:907pic:3' TGCCTTCCCGTCTC------TCCCGGTC 5'& ||.|||| |||||||| &5' -------GGTAGAGCCCTCAAGGGCCAG 3'
Rnf166mmu-miR-338-3pbeg:241end:254pic:3' GTTGTTTTAGTGACTACGACCT 5'& .| .|||||| &5' ----------GCAAGTGCTGG- 3'
Rnf166mmu-miR-339-3pbeg:702end:723pic:3' GCCGA-GACAGCGGCTCCGCGAGT 5'& |||| ||||| ||.|||. &5' -GGCTCCTGTCT----GGTGCTT- 3'
Rnf166mmu-miR-343beg:610end:634pic:3' AGACCCGTG-TAC--TTCCCTCT 5'& |||| .|| .||||||. &5' --TGGGATGAGTGTAGAGGGAGG 3'
Rnf166mmu-miR-345-5pbeg:243end:267pic:3' TTCGTGACCTGATCCCCAGTCG 5'& ||| |||| | ||||||| &5' AAGTGCTGGCCATTGGGTCAG- 3'
Rnf166mmu-miR-34abeg:357end:376pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||||| ||| .|||||| &5' ----CCAGCCAAG--GCTGCCA 3'
Rnf166mmu-miR-350beg:418end:437pic:3' CTTTCACATACCCG-AAACACTT 5'& ||| ||| ||||||| &5' ------GTACTGGCTTTTGTGA- 3'
Rnf166mmu-miR-370beg:318end:343pic:3' TGGTCCAAGGTG-GGGTCGTCCG 5'& .|| | . ||||||||| &5' GCCCTAAGCTGTGCCCAGCAGG- 3'
Rnf166mmu-miR-376cbeg:651end:665pic:3' TGCACTTTAAAGGAGATACAA 5'& ||. |||.||| &5' ---------TTTGTCTGTGT- 3'
Rnf166mmu-miR-377beg:286end:308pic:3' TGTTTTCAACGGAAACACACTA 5'& || .| ||.|| ||||||. &5' ACTT-GG-TGTCTGTGTGTGG- 3'
Rnf166mmu-miR-377beg:649end:667pic:3' TGTTTTCAACGGAA---ACACACTA 5'& ||.|| ||||||| &5' ---------GCTTTGTCTGTGTGA- 3'
Rnf166mmu-miR-384-3pbeg:428end:447pic:3' TAACACTTGTTAAAGATCCTTA 5'& |||||| |.|||||| &5' -TTGTGATA----TTTAGGAA- 3'
Rnf166mmu-miR-429beg:540end:561pic:3' TGCCGTAATGGTC-----TGTCATAAT 5'& ||.|| .||||||| &5' --------ACTAGGAAGAGCAGTATT- 3'
Rnf166mmu-miR-432beg:222end:243pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |||| | |.||.||||. &5' --GCCCTCGG---TGCTTCAAGG 3'
Rnf166mmu-miR-449abeg:357end:376pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||||| ||| .|||||| &5' -CCAGC---CAAG--GCTGCCA 3'
Rnf166mmu-miR-450a-3pbeg:136end:156pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||. ||.| |||||||. &5' -TGGTCTCAGA--ATCCCCAG- 3'
Rnf166mmu-miR-450a-3pbeg:660end:683pic:3' TACTTAC-GTT--TCGTAGGGGTTA 5'& | .|| ||. .||.||||||| &5' --GTGTGACAGGTGGCGTCCCCAA- 3'
Rnf166mmu-miR-450b-3pbeg:1000end:1017pic:3' TACGTACGTTTTACAAGGGTTA 5'& .|||.||||.|||| &5' -------TAAAGTGTTTCCAA- 3'
Rnf166mmu-miR-466a-3pbeg:287end:307pic:3' AGAATACACACGCACATACATAT 5'& |||. |||| .||||.|| &5' -CTTG-GTGTCTGTGTGTG---- 3'
Rnf166mmu-miR-466b-3-3pbeg:287end:307pic:3' AGAATACACACGCACATACATAA 5'& |||. |||| .||||.|| &5' -CTTG-GTGTCTGTGTGTG---- 3'
Rnf166mmu-miR-466b-3pbeg:287end:307pic:3' AGAATACACACGCACATACATAT 5'& |||. |||| .||||.|| &5' -CTTG-GTGTCTGTGTGTG---- 3'
Rnf166mmu-miR-466c-3pbeg:287end:307pic:3' AGAATACACACGCACATACATAT 5'& |||. |||| .||||.|| &5' -CTTG-GTGTCTGTGTGTG---- 3'
Rnf166mmu-miR-466e-3pbeg:287end:307pic:3' AGAATACACACGCACATACATAT 5'& |||. |||| .||||.|| &5' -CTTG-GTGTCTGTGTGTG---- 3'
Rnf166mmu-miR-466gbeg:649end:665pic:3' ACACACACGTACACAGACATA 5'& || |||||||.| &5' -------GCTT-TGTCTGTGT 3'
Rnf166mmu-miR-467abeg:553end:576pic:3' GCGTATATGTACGTCCGTGAAT 5'& |.|| .||| | |||.||| &5' -GTATTTTTATGGA-GCATTTA 3'
Rnf166mmu-miR-467bbeg:560end:577pic:3' GTATATGTACGTCCGTGAATG 5'& .||| | |||.|||| &5' ------TATGGA-GCATTTAC 3'
Rnf166mmu-miR-470beg:100end:122pic:3' TGAGTGGTCACGG-TCAGGTTCTT 5'& |||||||| ||| ||| .||| &5' -CTCACCAG-GCCAAGT---GGAA 3'
Rnf166mmu-miR-501-5pbeg:303end:316pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& ||| .|||||| &5' ----------GGA-GAAGGAT- 3'
Rnf166mmu-miR-540-3pbeg:155end:180pic:3' GGTCCTAG--CTGGA-GACTGGA 5'& | ||||| |.|. |||.|| &5' CTGGGATCCTGGCTAGCTGGCC- 3'
Rnf166mmu-miR-541beg:799end:819pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& ||| || .||.|||.| &5' -----GACAGA-AT-GGAGTCCTT- 3'
Rnf166mmu-miR-542-5pbeg:680end:699pic:3' AGCACTGTACTACTAGGGGCTC 5'& | |||| |||||.|.||| &5' ----GCCATG-TGATCTCTGAG 3'
Rnf166mmu-miR-670beg:851end:872pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& || || | || |||||| &5' -TC-CCTCCT-CAGGCAGGGA- 3'
Rnf166mmu-miR-673-5pbeg:755end:774pic:3' GAGGTTCCTGGTCT-CGACACTC 5'& ||.||| ||||||. &5' ------GGGCCACTTGCTGTGG- 3'
Rnf166mmu-miR-676starbeg:609end:629pic:3' CGTTCAGGATTCCAACATCTCA 5'& | .| |.|| ||||||| &5' GTGGGA--TGAG--TGTAGAG- 3'
Rnf166mmu-miR-679beg:89end:114pic:3' TGGTTCTCA-GTGGAGT-GTCAGG 5'& ||.|||| |.||||| ||| || &5' --CAGGAGTGCGCCTCACCAGGCC 3'
Rnf166mmu-miR-694beg:547end:565pic:3' GAAGTC-CGTTGTAAAAGTC 5'& || |||..|||||.| &5' ----AGAGCAGTATTTTTA- 3'
Rnf166mmu-miR-698beg:622end:644pic:3' TC-CCTTCCTTTGCTCTTAC 5'& || ||.||| |.|| |..|| &5' AGAGGGAGG-AGCGTGGGTG 3'
Rnf166mmu-miR-717beg:694end:718pic:3' TCTCTTCCATAGA-GACAGACTC 5'& |||.||||. || |||||||. &5' -GAGGAGGTGGCTCCTGTCTGG- 3'
Rnf166mmu-miR-743abeg:966end:988pic:3' AGATGAGTCGAACCACAGAAAG 5'& .| .| ||| |||||||. &5' ---GCATAAATTGCTGTCTTTT 3'
Rnf166mmu-miR-743b-3pbeg:966end:988pic:3' AGATAAGTCGT-----ACTACAGAAAG 5'& .||| || |||||||. &5' -------GGCATAAATTGCTGTCTTTT 3'
Rnf166mmu-miR-744beg:809end:828pic:3' ACGACAATCGGGAT--CGGGGCGT 5'& ||.||| ||||.|| &5' -------AGTCCTTCTGCCCTGC- 3'
Rnf166mmu-miR-744beg:382end:403pic:3' ACGACAATC-GGGATCGGGGCGT 5'& || | |||||||..||| &5' ----GTCGGTCCCTAGCTTCGC- 3'
Rnf166mmu-miR-758beg:562end:580pic:3' ATCACCTGGTCCAGTGTTT 5'& |||| || |.||||| &5' ---TGGAGCAT-TTACAAA 3'
Rnf166mmu-miR-760beg:824end:847pic:3' AGGGGT-GTCT-GGGTCTCGGC 5'& |||.. || .|||||||| &5' -CCCTGTCACCTTCCAGAGCC- 3'
Rnf166mmu-miR-764-5pbeg:407end:419pic:3' TCCTCCTGTACACTCGTGG 5'& |||||||.. &5' ----------GTGAGCATT 3'
Rnf166mmu-miR-7bbeg:502end:525pic:3' TGTTGTTT---TAGTGTTCAGAAGGT 5'& .||||| .|.|| |||||.| &5' --GACAAAGCAGTTAC---TCTTCTA 3'
Rnf166mmu-miR-880beg:794end:815pic:3' AGATGAGTCTCTCCTACCTCAT 5'& .| |||| || ||||||| &5' ---GCCCAGACAGAATGGAGT- 3'
Rnf166mmu-miR-133astarbeg:866end:886pic:3' TAAACC--AAGGTAAAATGGTCG 5'& || |||| |||||||. &5' ----GGACTTCCC--TTACCAGT 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Rnf166RAID00103409mmu-miR-7649-5pmiRNAMIMAT0029800Rnf166mRNA68718Prediction0.1828
Rnf166RAID00248415mmu-miR-6904-5pmiRNAMIMAT0027708Rnf166mRNA68718Prediction0.1828
Rnf166RAID00292485mmu-miR-200b-3pmiRNAMIMAT0000233Rnf166mRNA68718CLIP-seq//Prediction0.6308
Rnf166RAID00327673mmu-miR-743a-3pmiRNAMIMAT0004238Rnf166mRNA68718Prediction0.1828
Rnf166RAID00387468mmu-miR-344e-3pmiRNAMIMAT0014924Rnf166mRNA68718CLIP-seq0.5483
Rnf166RAID00389369mmu-miR-672-3pmiRNAMIMAT0017241Rnf166mRNA68718Prediction0.1828
Rnf166RAID00418787mmu-miR-543-3pmiRNAMIMAT0003168Rnf166mRNA68718Prediction0.1828
Rnf166RAID00444559mmu-miR-5110miRNAMIMAT0020618Rnf166mRNA68718Prediction0.1828
Rnf166RAID00519106mmu-miR-7218-5pmiRNAMIMAT0028404Rnf166mRNA68718Prediction0.1828
Rnf166RAID00532210mmu-miR-328-3pmiRNAMIMAT0000565Rnf166mRNA68718Prediction0.1828
Rnf166RAID00549071mmu-miR-322-3pmiRNAMIMAT0000549Rnf166mRNA68718Prediction0.1828
Rnf166RAID00573065mmu-miR-7648-3pmiRNAMIMAT0029799Rnf166mRNA68718Prediction0.1828
Rnf166RAID00605838mmu-miR-3087-5pmiRNAMIMAT0014895Rnf166mRNA68718Prediction0.1828
Rnf166RAID00619344mmu-miR-302a-3pmiRNAMIMAT0000380Rnf166mRNA68718Prediction0.1828
Rnf166RAID00676418mmu-miR-6957-5pmiRNAMIMAT0027814Rnf166mRNA68718Prediction0.1828
Rnf166RAID00759269mmu-miR-429-3pmiRNAMIMAT0001537Rnf166mRNA68718CLIP-seq//Prediction0.6308
Rnf166RAID00825574mmu-miR-384-3pmiRNAMIMAT0001076Rnf166mRNA68718Prediction0.2202
Rnf166RAID00925781mmu-miR-7038-3pmiRNAMIMAT0027981Rnf166mRNA68718Prediction0.1828
Rnf166RAID01114906mmu-miR-344d-3pmiRNAMIMAT0014808Rnf166mRNA68718CLIP-seq0.5483
Rnf166RAID01116757mmu-miR-6337miRNAMIMAT0025080Rnf166mRNA68718Prediction0.1828
Rnf166RAID01118627mmu-miR-1291miRNAMIMAT0031397Rnf166mRNA68718Prediction0.1828
Rnf166RAID01232133mmu-miR-7650-3pmiRNAMIMAT0029803Rnf166mRNA68718Prediction0.1828
Rnf166RAID01398009mmu-miR-302b-3pmiRNAMIMAT0003374Rnf166mRNA68718Prediction0.1828
Rnf166RAID01424345mmu-miR-760-3pmiRNAMIMAT0003898Rnf166mRNA68718Prediction0.1828
Rnf166RAID01435559mmu-miR-6975-3pmiRNAMIMAT0027853Rnf166mRNA68718Prediction0.1828
Rnf166RAID01463031mmu-miR-7081-5pmiRNAMIMAT0028068Rnf166mRNA68718Prediction0.1828
Rnf166RAID01640795mmu-miR-200c-3pmiRNAMIMAT0000657Rnf166mRNA68718CLIP-seq//Prediction0.6308
Rnf166RAID01732073mmu-miR-23b-5pmiRNAMIMAT0016980Rnf166mRNA68718Prediction0.1828
Rnf166RAID01752072mmu-miR-188-3pmiRNAMIMAT0004541Rnf166mRNA68718Prediction0.1828
Rnf166RAID01955538mmu-miR-677-3pmiRNAMIMAT0017246Rnf166mRNA68718Prediction0.1828
Rnf166RAID01967089mmu-miR-410-3pmiRNAMIMAT0001091Rnf166mRNA68718CLIP-seq//Prediction0.6308
Rnf166RAID02128228mmu-miR-743b-3pmiRNAMIMAT0004840Rnf166mRNA68718Prediction0.1828
Rnf166RAID02147680mmu-miR-155-5pmiRNAMIMAT0000165Rnf166mRNA68718Prediction0.1828
Rnf166RAID02154389mmu-miR-6900-5pmiRNAMIMAT0027700Rnf166mRNA68718Prediction0.1828
Rnf166RAID02371536mmu-miR-7222-3pmiRNAMIMAT0028413Rnf166mRNA68718Prediction0.1828
Rnf166RAID02371687mmu-miR-350-3pmiRNAMIMAT0000605Rnf166mRNA68718Prediction0.1828
Rnf166RAID02438050mmu-miR-7030-3pmiRNAMIMAT0027965Rnf166mRNA68718Prediction0.1828
Rnf166RAID02603391mmu-miR-3058-5pmiRNAMIMAT0014813Rnf166mRNA68718Prediction0.1828
Rnf166RAID02603470mmu-miR-762miRNAMIMAT0003892Rnf166mRNA68718Prediction0.1828
Rnf166RAID02682267mmu-miR-6914-5pmiRNAMIMAT0027728Rnf166mRNA68718Prediction0.1828
Rnf166RAID02685687mmu-miR-188-5pmiRNAMIMAT0000217Rnf166mRNA68718Prediction0.1828
Rnf166RAID02725469mmu-miR-3075-5pmiRNAMIMAT0014858Rnf166mRNA68718Prediction0.1828
Rnf166RAID02793326mmu-miR-490-3pmiRNAMIMAT0003780Rnf166mRNA68718Prediction0.1828
Rnf166RAID03065758mmu-miR-345-5pmiRNAMIMAT0000595Rnf166mRNA68718Prediction0.1828
Rnf166RAID03070372mmu-miR-222-3pmiRNAMIMAT0000670Rnf166mRNA68718Prediction0.1828
Rnf166RAID03081178mmu-miR-6991-3pmiRNAMIMAT0027885Rnf166mRNA68718Prediction0.1828
Rnf166RAID03117121mmu-miR-7061-3pmiRNAMIMAT0028027Rnf166mRNA68718Prediction0.1828
Rnf166RAID03209914mmu-miR-23a-5pmiRNAMIMAT0017019Rnf166mRNA68718Prediction0.1828
Rnf166RAID03224515mmu-miR-342-3pmiRNAMIMAT0000590Rnf166mRNA68718Prediction0.1828
Rnf166RAID03265379mmu-miR-5107-5pmiRNAMIMAT0020615Rnf166mRNA68718Prediction0.1828
Rnf166RAID03285918mmu-miR-136-5pmiRNAMIMAT0000148Rnf166mRNA68718Prediction0.1828
Rnf166RAID03338750mmu-miR-377-3pmiRNAMIMAT0000741Rnf166mRNA68718Prediction0.1828
Rnf166RAID03408464mmu-miR-142bmiRNAMIMAT0031402Rnf166mRNA68718Prediction0.1828
Rnf166RAID03447402mmu-miR-6917-5pmiRNAMIMAT0027734Rnf166mRNA68718Prediction0.1828
Rnf166RAID03458094mmu-miR-7083-3pmiRNAMIMAT0028073Rnf166mRNA68718Prediction0.1828
Rnf166RAID03584776mmu-miR-504-5pmiRNAMIMAT0004889Rnf166mRNA68718Prediction0.1828
Rnf166RAID03682231mmu-miR-7239-3pmiRNAMIMAT0028447Rnf166mRNA68718Prediction0.1828
Rnf166RAID03704748mmu-miR-6954-3pmiRNAMIMAT0027809Rnf166mRNA68718Prediction0.1828
Rnf166RAID03823634mmu-miR-3090-5pmiRNAMIMAT0014901Rnf166mRNA68718Prediction0.1828
Rnf166RAID03874161mmu-miR-6940-5pmiRNAMIMAT0027780Rnf166mRNA68718Prediction0.1828