DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Chfr ATTTA 87-2078 2613-2617;2648-2652;2655-2659;2720-2724 Chfr WWATTTAWW 87-2078 2646-2654;2718-2726 Chfr WWWATTTAWWW 87-2078 2645-2655;2717-2727 Chfr WWWWATTTAWWWW 87-2078 2644-2656

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 231600 Chfr cguuccgucACCGGACAUGUCa ||| ||||||| ucaucuauuUGG--UGUACAGg 2 14 464 483 [mm9:5:110572641-110572660:+] 0.6841 142 7 -12.06 -0.2450 MIMAT0004519 mmu-let-7g* 231600 Chfr cguUCCGUCACCGGAC--AUGUCa || ||||| |||| ||||| ugcAGACAGUGUCCUGAAUACAGa 2 20 1283 1306 [mm9:5:110583872-110583895:+] 0.6711 127 0 -23.71 -0.2435 MIMAT0000137 mmu-miR-126-5p 231600 Chfr gcgcaugguuuucAUUAUUac |||||| ggugcuuaucuucUAAUAAga 3 9 515 535 [mm9:5:110600438-110600458:+] 0.5620 120 0 -8.21 -0.1517 MIMAT0004532 mmu-miR-136* 231600 Chfr uucugaguaaACUCUGCUACUa ||| ||||||| acaaagcugcUGAUACGAUGAg 2 13 262 283 [mm9:5:110569178-110569199:+] 0.5076 152 7 -13.40 -0.1747 MIMAT0004534 mmu-miR-145* 231600 Chfr guucuugucauAAAGGUCCUUa || :|||||| uaacuuuuugcUUCUCAGGAAa 2 12 935 956 [mm9:5:110600858-110600879:+] 0.5964 131 6 -10.24 -0.1319 MIMAT0004541 mmu-miR-188-3p 231600 Chfr acGUU-UGGGACGU--ACACCCUc ||: ||:|||:: ||||||| ggCAGUACUCUGUGUUUGUGGGAg 2 20 998 1021 [mm9:5:110600921-110600944:+] 0.5356 157 7 -30.02 -0.6518 MIMAT0004542 mmu-miR-191* 231600 Chfr ccCUUGCUUUAGGUUCA-CGUCg | ::||:|| |||| |||| uuGUGUGAGAUAAAAGUCGCAGu 2 21 1095 1117 [mm9:5:110580697-110580705,110582137-110582150:+] 0.7171 128 0 -17.41 -0.7334 MIMAT0004545 mmu-miR-200b* 231600 Chfr agguUACGACGGGUCAUUCUAc || || :|:| |||||| gcuuAU-CU-UCUAAUAAGAUu 2 19 518 537 [mm9:5:110600441-110600460:+] 0.5620 122 6 -8.30 -0.1491 MIMAT0004546 mmu-miR-202-5p 231600 Chfr uuucUUCAUAUACGUAUCCUu |:| :|| ||||||| cuccAGGGGUA--CAUAGGAu 2 18 441 459 [mm9:5:110600364-110600382:+] 0.5620 146 7 -15.23 -0.2559 MIMAT0004546 mmu-miR-202-5p 231600 Chfr uuUCUUCAUAUACGUAUCCUu | ::| | | ||||||| aaAUGGGAAGCU-CAUAGGAa 2 20 363 382 [mm9:5:110600286-110600305:+] 0.5421 141 7 -14.57 -0.6600 MIMAT0004547 mmu-miR-203* 231600 Chfr acaacuUGACAGUUCUUGGUGa :|| |:||||||| agacauGCUUAGAGGAACCACa 2 17 659 680 [mm9:5:110573887-110573908:+] 0.6639 148 7 -13.30 -0.5858 MIMAT0004573 mmu-miR-293* 231600 Chfr guuuuACAGUGU-GUCAAACUca |||:|:| : |||||| ucaccUGUUAUAUUUGUUUGAaa 3 18 907 929 [mm9:5:110600830-110600852:+] 0.5964 136 0 -12.04 -0.1342 MIMAT0004574 mmu-miR-294* 231600 Chfr ucuaucccggagguAAAACUCa ||||||| gccuuuguggaauuUUUUGAGa 2 9 1712 1733 [mm9:5:110592775-110592796:+] 0.5130 140 7 -10.68 -0.7385 MIMAT0000376 mmu-miR-298 231600 Chfr ccCUUCUUGUCGGGAGGAGACGg ||: | |||: ||||||| cgGAGCCAGAGCUGACCUCUGCa 2 22 731 753 [mm9:5:110573959-110573981:+] 0.5940 157 7 -24.36 -0.1864 MIMAT0004578 mmu-miR-300* 231600 Chfr uguuuccUAUUGGAGAGAAGUu ||: | ||||||| ggauuacAUGUGCCCUCUUCAa 2 16 1417 1438 [mm9:5:110587825-110587846:+] 0.7077 147 7 -16.58 -0.4283 MIMAT0004579 mmu-miR-302a* 231600 Chfr cgUUCAUGUUG-GUGCAAAU-UCa ||| | |:| :||||||| || gaAAGGA-AGCAUACGUUUACAGc 2 21 418 440 [mm9:5:110600341-110600363:+] 0.5620 125 0 -13.29 -0.1025 MIMAT0004616 mmu-miR-30c-1* 231600 Chfr ccucauuuguugggAGAGGGUc ||||||| cugauacgaugagaUCUCCCAg 2 9 271 292 [mm9:5:110569187-110569208:+] 0.5076 140 7 -19.52 -0.1328 MIMAT0005438 mmu-miR-30c-2* 231600 Chfr ucucauuugucggaAGAGGGUc ||||||| cugauacgaugagaUCUCCCAg 2 9 271 292 [mm9:5:110569187-110569208:+] 0.5076 140 7 -16.54 -0.1315 MIMAT0004619 mmu-miR-200a* 231600 Chfr aggucgugacaggccAUUCUAc |||||| gugcuuaucuucuaaUAAGAUu 2 8 516 537 [mm9:5:110600439-110600460:+] 0.5620 120 6 -10.87 -0.1506 MIMAT0004620 mmu-let-7a* 231600 Chfr ccUUUCUGUCAUCUAACAUAUc |:| |||| ||||||| aaAGACACAGCCUUUUGUAUAu 2 21 474 495 [mm9:5:110600397-110600418:+] 0.5620 156 7 -10.88 -0.8950 MIMAT0004621 mmu-let-7b* 231600 Chfr cccuuccGUCAUCCAACAUAUc ||| ||||||| aaagacaCAGCCUUUUGUAUAu 2 16 474 495 [mm9:5:110600397-110600418:+] 0.5620 143 7 -7.97 -0.9017 MIMAT0005439 mmu-let-7c-2* 231600 Chfr ccUUUCUGUCAUCUAACAUAUc |:| |||| ||||||| aaAGACACAGCCUUUUGUAUAu 2 21 474 495 [mm9:5:110600397-110600418:+] 0.5620 156 7 -10.88 -0.8950 MIMAT0004623 mmu-let-7f* 231600 Chfr ccCUUCCGUUAUC---UAACAUAUc ||| | | || ||||||| ugGAAAGACACAGCCUUUUGUAUAu 2 21 471 495 [mm9:5:110600394-110600418:+] 0.5620 143 7 -9.20 -0.9050 MIMAT0004629 mmu-miR-22* 231600 Chfr auuucgaACGGUGA-CUUCU-UGa || |||| ||||| || ggugaggUGACACUGGAAGACACc 2 16 367 390 [mm9:5:110569447-110569470:+] 0.6903 122 0 -15.33 -0.1228 MIMAT0004630 mmu-miR-26b* 231600 Chfr cucgGUUCAUUACCUCUU-GUCc ||||| :| |||| ||| gcugCAAGUUGUUAAGAAGCAGa 2 19 417 439 [mm9:5:110572594-110572616:+] 0.6841 126 0 -12.06 -0.9570 MIMAT0004631 mmu-miR-29a* 231600 Chfr gacUUGUGGUUUUCUUUAGUca | | :: | ||||||| uuuAUCUUUUAUUGAAAUCAcc 3 20 890 911 [mm9:5:110600813-110600834:+] 0.5964 127 0 -7.76 -0.1156 MIMAT0000556 mmu-miR-324-3p 231600 Chfr ucGUCGUG-GACCCCGUCACc | |::: ||| ||||||| ucCUGUGUGCUGAGGCAGUGa 2 19 288 308 [mm9:5:110600211-110600231:+] 0.4308 153 7 -17.32 -0.3141 MIMAT0004640 mmu-miR-325 231600 Chfr aacUAUCCU-CCACGAGUUAUUu ||:| | ||| ||||||| ccaAUGGAACAGUGAUCAAUAAg 2 20 395 417 [mm9:5:110572572-110572594:+] 0.6841 158 7 -12.93 -0.4242 MIMAT0000571 mmu-miR-331-3p 231600 Chfr aagauccUAUCCG-GGUCCCCg | || | ||||||| uacguuuACAGCCUCCAGGGGu 2 15 429 450 [mm9:5:110600352-110600373:+] 0.5620 145 7 -17.61 -0.4921 MIMAT0000578 mmu-miR-337-3p 231600 Chfr ucCGUAGUAUAUCCUCGACUu || | | : ||||||| auGCCUGACCGGAGAGCUGAa 2 20 1475 1495 [mm9:5:110587883-110587903:+] 0.7077 143 7 -12.85 -0.3734 MIMAT0004656 mmu-miR-345-3p 231600 Chfr cagaggucuggggaUCAAGUCc ||||||| cugaugaagaggggAGUUCAGa 2 9 1197 1218 [mm9:5:110582230-110582251:+] 0.7706 140 7 -11.52 -0.2170 MIMAT0004656 mmu-miR-345-3p 231600 Chfr caGAGGUCUGGGGAUC-AAGUCc |||||| :: :||| ||||| acCUCCAG-UUAUUAGUUUCAGg 2 21 962 983 [mm9:5:110580564-110580585:+] 0.5154 130 0 -25.26 -0.1484 MIMAT0000605 mmu-miR-350 231600 Chfr cuuucACAUACCCG--AAACACUu ||| || || ||||||| uuaucUGU-UGAGCCGUUUGUGAg 2 18 226 248 [mm9:5:110569142-110569164:+] 0.4861 150 7 -11.02 -0.1143 MIMAT0004660 mmu-miR-19a* 231600 Chfr caUC-ACGUUGAUACGUUUUGAu || | :|| ||| |||||| uaAGAUUUAAAUAUUAAAAACUg 2 21 531 553 [mm9:5:110600454-110600476:+] 0.5620 131 6 -6.71 -0.1874 MIMAT0004660 mmu-miR-19a* 231600 Chfr caucacgUUGAUACGUUUUGAu :::| | :|||||| guuuuuaGGUUUUUUAAAACUu 2 16 867 888 [mm9:5:110600790-110600811:+] 0.5703 131 6 -7.51 -0.2301 MIMAT0004660 mmu-miR-19a* 231600 Chfr caucacguugauacgUUUUGAu |||||| uguuauauuuguuugAAAACUg 2 8 912 933 [mm9:5:110600835-110600856:+] 0.5964 120 6 -6.11 -0.1079 MIMAT0004663 mmu-miR-200c* 231600 Chfr gguuuGUGACGACC---CA-UUCUGc | :|||||| || ||||| cuuuuCUUUGCUGGAAAGUAAAGACc 2 18 879 904 [mm9:5:110575589-110575614:+] 0.5759 120 0 -14.78 -0.3325 MIMAT0000672 mmu-miR-199b* 231600 Chfr cuuGUCCAUCAGAUUUGUGACCc | |||: | :||||||| uauCUGGUGAGGU-GACACUGGa 2 21 362 383 [mm9:5:110569442-110569463:+] 0.6903 146 7 -17.46 -0.3189 MIMAT0004670 mmu-miR-7a* 231600 Chfr auaccgucuGACA--CUAAACAAc |||| ||||||| ugaaaucacCUGUUAUAUUUGUUu 2 14 902 925 [mm9:5:110600825-110600848:+] 0.5964 144 7 -8.00 -1.0916 MIMAT0004670 mmu-miR-7a* 231600 Chfr auaccgucugacacuAAACAAc |||||| aauaauacuugaaauUUUGUUu 2 8 849 870 [mm9:5:110600772-110600793:+] 0.5442 120 6 -4.67 -0.1032 MIMAT0003387 mmu-miR-376a* 231600 Chfr ugaGUAUCUUCCUCUUAGAUGg :||| | | |||:||| uacUAUA-AUUUAUAAUUUACa 2 20 563 583 [mm9:5:110600486-110600506:+] 0.5620 129 0 -5.86 -0.1012 MIMAT0000742 mmu-miR-378* 231600 Chfr uguguccuggaccucAGUCCUc |||||| guaacuuuuugcuucUCAGGAa 2 8 934 955 [mm9:5:110600857-110600878:+] 0.5964 120 6 -11.33 -0.1989 MIMAT0000742 mmu-miR-378* 231600 Chfr uguguccUGGACCUCAGUCCUc ||| |||||||| ugcugcaACCCAAAGUCAGGAg 2 16 1167 1188 [mm9:5:110582200-110582221:+] 0.7706 151 7 -21.15 -0.6895 MIMAT0000742 mmu-miR-378* 231600 Chfr uguguccUGGACCUCA-GUCCUc |::||| || ||||| aucaucuAUUUGGUGUACAGGAa 2 16 463 485 [mm9:5:110572640-110572662:+] 0.6841 123 0 -16.83 -0.7524 MIMAT0002104 mmu-miR-463* 231600 Chfr uacuaccuGUUGUUUAAUCCAu ::::| ||||||| cccucaucUGGUACAUUAGGUu 2 15 812 833 [mm9:5:110600735-110600756:+] 0.4846 146 7 -10.54 -0.1279 MIMAT0002104 mmu-miR-463* 231600 Chfr uacUACCUGUUGUUUAAUCCau || ||| | |||||||| caaAUUGACUA-AAAUUAGGaa 3 20 582 602 [mm9:5:110600505-110600525:+] 0.5620 145 0 -11.72 -0.1244 MIMAT0002104 mmu-miR-463* 231600 Chfr uacuaccuguuguuuAAUCCAu |||||| cuugaaauuuuguuuUUAGGUu 2 8 856 877 [mm9:5:110600779-110600800:+] 0.5442 120 6 -5.80 -0.1512 MIMAT0004758 mmu-miR-463 231600 Chfr gaUGGAAUAUACCACAG-AUAGu || | |: ||||| |||| ggACAUCCUGAAGUGUCUUAUCu 2 21 1672 1694 [mm9:5:110591788-110591800,110592748-110592757:+] 0.5660 120 0 -12.90 -0.2216 MIMAT0002111 mmu-miR-470 231600 Chfr ugAGUGGUCACGGUCAGGUUCUu || ||||| : ||||||| uuUCUCCAGUUU---UCCAAGAc 2 22 848 867 [mm9:5:110575558-110575577:+] 0.5836 153 7 -17.89 -0.6460 MIMAT0004760 mmu-miR-470* 231600 Chfr agaagagucuuuccaUGACCAa |||||| uauauuuguuugaaaACUGGUa 2 8 915 936 [mm9:5:110600838-110600859:+] 0.5964 120 6 -10.61 -0.1748 MIMAT0004781 mmu-miR-532-3p 231600 Chfr acguUCGGA-ACCCACACCCUCc | :|| || |||||||| caguACUCUGUGUUUGUGGGAGa 2 19 1000 1022 [mm9:5:110600923-110600945:+] 0.4747 153 7 -18.30 -0.8126 MIMAT0003127 mmu-miR-484 231600 Chfr uagccCUCCCCUGA-CUCGGACu || || |:| ||||||| accauGA-GGAAUUGGAGCCUGc 2 18 902 923 [mm9:5:110575612-110575633:+] 0.5681 150 7 -20.27 -0.3355 MIMAT0004789 mmu-miR-450a-3p 231600 Chfr uaCUUACGUUUCGU--AGGGGUUa ||| | ||||| ||||||| ggGAACAC-AAGCAUCUCCCCAAa 2 21 784 806 [mm9:5:110575494-110575516:+] 0.5649 157 7 -17.51 -0.3280 MIMAT0004790 mmu-miR-503* 231600 Chfr gguccGUCACCUUUGUUAUGAg | || | | |||||| aaaaaCUGUAGCACAAAUACUa 2 18 546 567 [mm9:5:110600469-110600490:+] 0.5620 121 6 -6.84 -0.1895 MIMAT0004820 mmu-miR-744* 231600 Chfr uccaacuccAAUCACCG-UUGUc | |||||| |||| augaaucuuUAAGUGGCAAACAg 2 14 518 540 [mm9:5:110573625-110573647:+] 0.6606 121 0 -17.12 -0.5805 MIMAT0003732 mmu-miR-668 231600 Chfr ccaucacccGGCUCGG-CUC-ACUGu | ||||| ||| |||| ccucuucuaCGGAGCCAGAGCUGACc 2 16 722 747 [mm9:5:110573950-110573975:+] 0.5940 122 0 -20.39 -0.1127 MIMAT0004822 mmu-miR-770-5p 231600 Chfr gcaccgggucugugcACCACGa |||||| uuauuuuaauaaguuUGGUGCu 2 8 499 520 [mm9:5:110600422-110600443:+] 0.5620 120 6 -14.01 -0.1488 MIMAT0015219 mmu-miR-3475 231600 Chfr aaguuugguacaCGGAGGUCu |||||||| cauacguuuacaGCCUCCAGg 2 10 427 447 [mm9:5:110600350-110600370:+] 0.5620 145 7 -18.94 -0.1666 MIMAT0015219 mmu-miR-3475 231600 Chfr aaguuugGUACACGGAGGUCu || | ||||||| aacuugaCACGAACCUCCAGu 2 15 950 970 [mm9:5:110580552-110580572:+] 0.5154 146 7 -15.43 -0.4921 MIMAT0003735 mmu-miR-672 231600 Chfr agugUGUGUCAUGUGGU-UGGAGu ||||| |::: || ||||| cagaACACAAUGUGGCAUACCUCu 2 20 494 517 [mm9:5:110572671-110572679,110573610-110573624:+] 0.6724 131 0 -17.35 -0.5273 MIMAT0003735 mmu-miR-672 231600 Chfr agugUGUGUCAUGUGGU-UGGAGu |||: | |||:|| ||||| aucaACAUCG-ACAUCAGACCUCc 2 20 684 706 [mm9:5:110573912-110573934:+] 0.6418 129 0 -19.14 -0.2220 MIMAT0003894 mmu-miR-764-5p 231600 Chfr uccuCCUGUACACUCGUGg ||| : ||||||: auuuGGAAGAAUGAGCAUa 2 16 612 630 [mm9:5:110600535-110600553:+] 0.5620 131 0 -12.64 -0.1180 MIMAT0014816 mmu-miR-3099 231600 Chfr agggguuggagagagAUCGGAu |||||| gacuaaaauuaggaaUAGCCUc 2 8 588 609 [mm9:5:110600511-110600532:+] 0.5620 120 6 -10.51 -0.1103 MIMAT0014816 mmu-miR-3099 231600 Chfr agggguuggaGAGAGAUCGGAu ||||||||||| aaauggcgaaCUCUCUAGCCUu 2 13 828 849 [mm9:5:110575538-110575559:+] 0.5862 160 7 -23.33 -0.5518 MIMAT0003896 mmu-miR-763 231600 Chfr cgGUGAC-CAAGAAGGGU-CGACc |: || | || ||||| |||| uaCGAUGAGAUC-UCCCAGGCUGu 2 21 275 297 [mm9:5:110569191-110569208,110569373-110569377:+] 0.5990 121 0 -18.26 -0.1381 MIMAT0004823 mmu-miR-666-3p 231600 Chfr ucguccgcuagugcGACGUCGg |||:||| uuaaauauuaaaaaCUGUAGCa 2 9 537 558 [mm9:5:110600460-110600481:+] 0.5620 124 0 -11.97 -0.1099 MIMAT0003739 mmu-miR-673-5p 231600 Chfr gagguuccuGGUCUCGACACUc |||| ||||||| ugagaucucCCAG-GCUGUGAc 2 14 280 300 [mm9:5:110569196-110569208,110569373-110569380:+] 0.5990 151 7 -18.81 -0.1195 MIMAT0003739 mmu-miR-673-5p 231600 Chfr gagguuccuGGUCUCGACACUc |: | ||||||| uuaucugucCUUGUGCUGUGAa 2 14 1689 1710 [mm9:5:110592752-110592773:+] 0.5097 145 7 -12.93 -0.4808 MIMAT0004824 mmu-miR-673-3p 231600 Chfr ccacgugucuugaGUCGGGGCCu ||||||||| gccagcuugccaaCAGCCCCGGa 2 11 1397 1419 [mm9:5:110583986-110584001,110587821-110587827:+] 0.6259 150 7 -27.58 -0.8140 MIMAT0003741 mmu-miR-674* 231600 Chfr aacAAGACUCUACCCUCGACAc |||| | | ||||||| ugaUUCUAAUAAAUGAGCUGUg 2 20 1035 1056 [mm9:5:110600958-110600979:+] 0.4747 155 7 -16.54 -0.5360 MIMAT0003741 mmu-miR-674* 231600 Chfr aaCAAGACUCU---AC--CCUCGACAc |||| |||: || ||||||| gaGUUCAGAGGACCUGCUAGAGCUGUc 2 21 1210 1236 [mm9:5:110582243-110582269:+] 0.7706 150 7 -18.53 -0.4291 MIMAT0003449 mmu-miR-488* 231600 Chfr aaCUCUCACGAUAAUAGACCc | |: || | ||||||| caGUGGAUG-AAAUAUCUGGu 2 20 350 369 [mm9:5:110569430-110569449:+] 0.6903 145 7 -12.20 -0.4349 MIMAT0003452 mmu-miR-678 231600 Chfr ggAGGUCAGGAACG---UGG-CUCUg ||||| |: ||| ||| |||| cuUCCAGCCUAUGCCUGACCGGAGAg 2 21 1465 1490 [mm9:5:110587873-110587898:+] 0.7077 127 0 -25.26 -0.2436 MIMAT0004825 mmu-miR-423-5p 231600 Chfr uuucaGAGCGAGAGACGGGGAGu | ||| || ||||||| ggaucCCCGC-GUC-GCCCCUCa 2 19 1504 1524 [mm9:5:110587912-110587932:+] 0.7077 146 7 -24.27 -0.1897 MIMAT0003457 mmu-miR-680 231600 Chfr gggggUACAGUCGUCUACGGg |||||| ||||||| ugaagAUGUCA-AAGAUGCCu 2 17 1011 1030 [mm9:5:110580613-110580632:+] 0.5814 158 7 -19.78 -0.5180 MIMAT0003462 mmu-miR-684 231600 Chfr aacUGAACUUCCCUUUUga :||| |||||| uuuGCUUCUCAGGAAAAaa 3 17 941 959 [mm9:5:110600864-110600882:+] 0.5964 124 0 -6.80 -0.1141 MIMAT0003469 mmu-miR-690 231600 Chfr aaaccaacACUCGGAUCGGAaa | :| |||||| acuaaaauUAGGAAUAGCCUca 3 15 589 610 [mm9:5:110600512-110600533:+] 0.5620 122 0 -9.24 -0.1820 MIMAT0003469 mmu-miR-690 231600 Chfr aaaccaacacucGGAUCGGAAa :|||||||| aauggcgaacucUCUAGCCUUu 2 11 829 850 [mm9:5:110575539-110575560:+] 0.5862 146 7 -17.54 -0.1649 MIMAT0003470 mmu-miR-691 231600 Chfr aaAAGACGGAGAGAAGUCCUUa ||:|||:|| ||||||| cuUUUUGCUUC---UCAGGAAa 2 21 938 956 [mm9:5:110600861-110600879:+] 0.5964 160 7 -19.75 -1.0084 MIMAT0003470 mmu-miR-691 231600 Chfr aaaAGACGGAGAGAAG-UCCUUa | |||| |||||| ||||| acaUGUGCC-CUCUUCAAGGAAg 2 20 1422 1443 [mm9:5:110587830-110587851:+] 0.7077 137 0 -22.76 -0.2268 MIMAT0003474 mmu-miR-694 231600 Chfr gaAGUCC--GUUGUAAAAGUc ||||| || ||||||| ucUCAGGAAAAAAAUUUUCAa 2 18 947 967 [mm9:5:110600870-110600890:+] 0.5964 156 7 -12.87 -1.1219 MIMAT0003487 mmu-miR-697 231600 Chfr agAGGUGUCC-UG-GUCCUA-CAa |||| :|| || :||||| || ccUCCAGGGGUACAUAGGAUAGUc 2 20 440 463 [mm9:5:110600363-110600386:+] 0.5620 125 0 -23.03 -0.2338 MIMAT0003493 mmu-miR-703 231600 Chfr aagAAAGGAAGACUUCCAAAa |||: ||:| |||||| aaaUUUUGUUUU-UAGGUUUu 2 19 860 879 [mm9:5:110600783-110600802:+] 0.5442 128 6 -11.75 -0.1661 MIMAT0003495 mmu-miR-705 231600 Chfr acgGGUGGGGUGGA-GGGUGg :|| || ||| ||||| acaUCAGACCUCCUCCCCACg 2 18 694 714 [mm9:5:110573922-110573942:+] 0.6196 121 0 -23.61 -0.1007 MIMAT0003510 mmu-miR-717 231600 Chfr ucucuuCCAUAGAGACAGACUc | || |||||||| ggaccuGCUAGAGCUGUCUGAu 2 17 1219 1240 [mm9:5:110582252-110582273:+] 0.7706 148 7 -13.63 -0.3459 MIMAT0003781 mmu-miR-676* 231600 Chfr cgUUCAGGAUUCC--AAC-AUCUCa :|||:| :||| || ||||| ggGAGUUCAGAGGACCUGCUAGAGc 2 21 1208 1232 [mm9:5:110582241-110582265:+] 0.7706 123 0 -17.44 -0.2795 MIMAT0004838 mmu-miR-742* 231600 Chfr acUAAUCGUUGGUACACUCau | |: :| ||||||| gcAGUGAAGAAGAUGUGAGaa 3 20 1113 1133 [mm9:5:110582146-110582166:+] 0.7706 127 0 -10.10 -0.1010 MIMAT0004839 mmu-miR-743b-5p 231600 Chfr acuACCUGUGGUCA-GACUUGu ||||:: ||| |||||| gcuUGGAUG-GAGUGCUGAACa 2 19 1635 1655 [mm9:5:110591751-110591771:+] 0.6254 124 6 -18.79 -0.8411 MIMAT0004842 mmu-miR-879 231600 Chfr ccgaaucucgauauUCGGAGa |||||| cuaaaauuaggaauAGCCUCa 2 8 590 610 [mm9:5:110600513-110600533:+] 0.5620 120 6 -12.21 -0.2157 MIMAT0004843 mmu-miR-879* 231600 Chfr ggcuuucGAACUUCGG-UAUUCg ||||||||| ||||| agacuccCUUGAAGCCAAUAAGg 2 16 552 574 [mm9:5:110573659-110573669,110573791-110573802:+] 0.6285 139 0 -19.80 -0.5840 MIMAT0004844 mmu-miR-880 231600 Chfr agaugagucucuCCUACCUCAu ||||||||| ggacaagugcuuGGAUGGAGUg 2 11 1627 1648 [mm9:5:110591743-110591764:+] 0.6254 150 7 -19.24 -0.1172 MIMAT0004848 mmu-miR-883a-5p 231600 Chfr caUUGACGA-UGAA-----GAGAGUCgu ||||| | |||| :|||||| aaAACUGGUAACUUUUUGCUUCUCAGga 3 21 927 954 [mm9:5:110600850-110600877:+] 0.5964 134 0 -19.22 -0.1565 MIMAT0004850 mmu-miR-883b-5p 231600 Chfr acUGACGAUGGGUAAGAGUCau ||| :| | ||||||| uaACUUUUUGC--UUCUCAGga 3 21 935 954 [mm9:5:110600858-110600877:+] 0.5964 129 0 -11.31 -0.1565 MIMAT0004850 mmu-miR-883b-5p 231600 Chfr acUGA-CGAUGGGUAAGA-GUCAu ||| ||| || |||| |||| gaACUCUCUAGCCUUUCUCCAGUu 2 21 835 858 [mm9:5:110575545-110575568:+] 0.5862 131 0 -16.89 -0.5710 MIMAT0004867 mmu-miR-327 231600 Chfr uaggagUACGG----GGAGUUCa ||||| ||||||| guggaaAUGCCCAAACCUCAAGu 2 14 989 1011 [mm9:5:110580591-110580613:+] 0.5165 144 7 -18.36 -0.4057 MIMAT0004867 mmu-miR-327 231600 Chfr uaggaguacgggGAGUUCa |||||| ggaauaaaaucaCUCAAGa 2 8 1146 1164 [mm9:5:110582179-110582197:+] 0.7706 120 6 -9.24 -0.1768 MIMAT0004870 mmu-miR-453 231600 Chfr acGUUCGAGUGAUACUCCGU-UGGa | || ||| ||| |||| ||| agCCAGAACACAAUGUGGCAUACCu 2 23 491 515 [mm9:5:110572668-110572679,110573610-110573622:+] 0.6724 134 0 -22.63 -0.5948 MIMAT0004888 mmu-miR-493 231600 Chfr ggaccGUGUGUCAUCCUGGAAGu ||: :: ||||||||| uguauCAUCUGCCAGGACCUUCu 2 19 1066 1088 [mm9:5:110580668-110580690:+] 0.6637 154 7 -17.93 -0.1980 MIMAT0004888 mmu-miR-493 231600 Chfr ggACCGUGUGUCA----UCC-UGGAAGu |||| | ::|| ||| |||||| acUGGCCCUUGGUGGGGAGGCACCUUCa 2 22 1363 1390 [mm9:5:110583952-110583979:+] 0.5440 124 6 -27.87 -0.1339 MIMAT0004898 mmu-miR-654-3p 231600 Chfr uuccacUACCAGUCGUCUGUAu |||| : ||||||| ucacccAUGGCU--CAGACAUg 2 17 646 665 [mm9:5:110573874-110573893:+] 0.6404 145 7 -14.59 -0.2323 MIMAT0004930 mmu-miR-466d-5p 231600 Chfr guaCAUGUACAUGCGUGUGUGu || :|| || ||||||| aucGUCAGUG-ACACACACACc 2 20 161 181 [mm9:5:110600084-110600104:+] 0.4821 153 7 -17.50 -0.1168 MIMAT0004862 mmu-miR-877* 231600 Chfr accCUCCUCCCUCUUCUCCUGu ||||:| | ||||||| gaaGAGGGGAGUUCAGAGGACc 2 20 1202 1223 [mm9:5:110582235-110582256:+] 0.7706 159 7 -24.76 -0.1702 MIMAT0005291 mmu-miR-582-5p 231600 Chfr ucauugaccaACUUGUUGACAu | | ||||||| uuaaaaaaaaUUAUCAACUGUc 2 13 644 665 [mm9:5:110600567-110600588:+] 0.5365 144 7 -8.46 -0.9301 MIMAT0005291 mmu-miR-582-5p 231600 Chfr ucauugaccaacuuGUUGACAu ||||||| aggaaaaaaauuuuCAACUGUu 2 9 951 972 [mm9:5:110600874-110600895:+] 0.5964 140 7 -9.24 -1.0709 MIMAT0005291 mmu-miR-582-5p 231600 Chfr ucAUUGACCAACUUGUUGACAu ||| | || || |||||| uuUAAAU-AUU-AAAAACUGUa 2 21 536 555 [mm9:5:110600459-110600478:+] 0.5620 124 6 -7.60 -0.2184 MIMAT0005830 mmu-miR-466l 231600 Chfr uuAUACACACGUACAUAAAUau ||||| | ::| |||||| caUAUGUUUCUGUUUAUUUAaa 3 21 627 648 [mm9:5:110600550-110600571:+] 0.5620 148 0 -6.19 -0.1293 MIMAT0005830 mmu-miR-466l 231600 Chfr uuauacacacguacaUAAAUAu |||||| agcacaaauacuauaAUUUAUa 2 8 555 576 [mm9:5:110600478-110600499:+] 0.5620 120 6 -3.66 -0.3341 MIMAT0005833 mmu-miR-669d 231600 Chfr uguAUAUGUACGUGUGUGUUCa |: || || : ||||||| cucUGGACCUGGGAACACAAGc 2 20 774 795 [mm9:5:110574002-110574006,110575489-110575505:+] 0.5661 155 7 -12.06 -0.2439 MIMAT0005839 mmu-miR-669f 231600 Chfr uaugcacacacacAUACAUAUAc | ||||||| aaagacacagccuUUUGUAUAUu 2 11 474 496 [mm9:5:110600397-110600419:+] 0.5620 142 7 -3.87 -1.0567 MIMAT0005845 mmu-miR-466k 231600 Chfr aguGUA-CAUGUACAUGUGUGUGu ||| || :|| |||||||| cguCAUCGUCAGUG-ACACACACa 2 21 157 179 [mm9:5:110600080-110600102:+] 0.5116 157 7 -20.33 -0.2373 MIMAT0005847 mmu-miR-1190 231600 Chfr cuGUCUCCCCUU--GGAGUCGACu || ||| || : ||||||| cuCAUAGGAAAAGUUGUCAGCUGu 2 21 373 396 [mm9:5:110600296-110600319:+] 0.5421 151 7 -17.21 -0.2440 MIMAT0005851 mmu-miR-1193 231600 Chfr cuaucauuuugccCACUGGAu ||||||| gaucucccaggcuGUGACCUc 2 9 283 303 [mm9:5:110569199-110569208,110569373-110569383:+] 0.5990 140 7 -11.69 -0.2354 MIMAT0005856 mmu-miR-1195 231600 Chfr acucguccgaccggaGCUUGAGu ||||||| acuuguugcaaauggCGAACUCu 2 9 819 841 [mm9:5:110575529-110575551:+] 0.5862 140 7 -16.23 -0.2062 MIMAT0005858 mmu-miR-1197 231600 Chfr ucuuCAUCUGGUACACAGGAu | ||| || ||||||| gucuGCAGA-CA-GUGUCCUg 2 18 1280 1298 [mm9:5:110583869-110583887:+] 0.6711 149 7 -17.88 -0.3934 MIMAT0007866 mmu-miR-1905 231600 Chfr gauggcgcaccacccUGACCAc |||||| uauauuuguuugaaaACUGGUa 2 8 915 936 [mm9:5:110600838-110600859:+] 0.5964 120 6 -9.25 -0.1715 MIMAT0007868 mmu-miR-1903 231600 Chfr acagaguccuucuuCUUCUUCc ||||||| auaaaagucgcaguGAAGAAGa 2 9 1104 1125 [mm9:5:110582137-110582158:+] 0.7706 140 7 -19.33 -1.0306 MIMAT0007871 mmu-miR-1892 231600 Chfr uaggagggagggcAGGGGUUUa |||||||| gaacacaagcaucUCCCCAAAa 2 10 786 807 [mm9:5:110575496-110575517:+] 0.5649 145 7 -14.01 -0.5224 MIMAT0007872 mmu-miR-1906 231600 Chfr ucGGGACGGAGUCC---GACGACGu || |||| :| | ||||||| agCCAUGCCAUAUGCACCUGCUGCu 2 21 1442 1466 [mm9:5:110587850-110587874:+] 0.7077 155 7 -23.17 -0.2524 MIMAT0007872 mmu-miR-1906 231600 Chfr ucggGACGGAGUCC-GA-CGACGu |||| ||| || ||||| ggggCUGCACGAGGACUGGCUGCu 2 19 1566 1589 [mm9:5:110589213-110589236:+] 0.7766 121 0 -20.15 -0.2409 MIMAT0007872 mmu-miR-1906 231600 Chfr ucgggacggaguccgACGACGu |||||| aaaucacucaagauaUGCUGCa 2 8 1152 1173 [mm9:5:110582185-110582206:+] 0.7706 120 6 -17.83 -0.1377 MIMAT0007876 mmu-miR-1907 231600 Chfr uggaGGUCUA-GGAGACGACGAg ||| || | |||||||| caugCCAUAUGCACCUGCUGCUu 2 19 1445 1467 [mm9:5:110587853-110587875:+] 0.7077 157 7 -20.46 -0.1310 MIMAT0007876 mmu-miR-1907 231600 Chfr uggaGGUCUAGGAGA-CGACGAg |::| | ||:| |||||| aggaCUGGCUGCUUUGGCUGCUu 2 19 1577 1599 [mm9:5:110589224-110589246:+] 0.7766 126 6 -18.33 -0.1208 MIMAT0007878 mmu-miR-1894-3p 231600 Chfr gaggGAAGUGGG---AGAGGGAACg ||| ||:| |||||||| agagCUUAACUCAAGACUCCCUUGa 2 19 539 563 [mm9:5:110573646-110573669,110573791-110573791:+] 0.6285 153 7 -21.44 -0.6067 MIMAT0009391 mmu-miR-1928 231600 Chfr cucgaccguuACAUCGa |||||| uauuaaaaacUGUAGCa 2 8 542 558 [mm9:5:110600465-110600481:+] 0.5620 120 6 -5.83 -0.3693 MIMAT0009393 mmu-miR-1930 231600 Chfr ugcgacGUCCAUGAUACCUCCa ||| | ||||||| ugaagcCAGACAAGAUGGAGGa 2 17 1034 1055 [mm9:5:110580636-110580657:+] 0.6637 148 7 -16.17 -0.3360 MIMAT0009405 mmu-miR-1941-5p 231600 Chfr uuCGGAGAC-AUGGU-C-GUAGAGGGa ||: ||| ||| | | ||||||| aaGCUGCUGAUACGAUGAGAUCUCCCa 2 23 265 291 [mm9:5:110569181-110569207:+] 0.5076 155 7 -23.87 -0.2652 MIMAT0009406 mmu-miR-1941-3p 231600 Chfr uacccucuaugacgAUUCUAc |||||| ugcuuaucuucuaaUAAGAUu 2 8 517 537 [mm9:5:110600440-110600460:+] 0.5620 120 6 -5.40 -0.1506 MIMAT0009422 mmu-miR-1951 231600 Chfr aucgguGUGGUCAGAGGUGAUg | |||| :||||||| gaugauCCCCAGGUUCCACUAu 2 17 622 643 [mm9:5:110573850-110573871:+] 0.6169 160 7 -22.06 -0.2923 MIMAT0009424 mmu-miR-1953 231600 Chfr gucuUCGGACUCU----UGAAAGGGu || ||| || ||||||| ucccAGGCUGUGACCUCUCUUUCCCc 2 19 287 312 [mm9:5:110569203-110569208,110569373-110569392:+] 0.5990 145 7 -17.37 -0.3068 MIMAT0009425 mmu-miR-1954 231600 Chfr uuGUCCCAGAGUG--AGACGUCa ||| : ||: ||||||| guCAGCCAUACAUUGUCUGCAGa 2 20 1266 1288 [mm9:5:110582299-110582299,110583856-110583877:+] 0.7208 142 7 -14.39 -1.0716 MIMAT0009427 mmu-miR-669n 231600 Chfr ugugUGUAGGUG-UGUGUUUa | | |::: :|||||| auuaAAAACUGUAGCACAAAu 2 17 543 563 [mm9:5:110600466-110600486:+] 0.5620 127 6 -9.88 -0.1577 MIMAT0009434 mmu-miR-1961 231600 Chfr aagaUUGAUGAUGGAGu ::| ||||||| ccacGGCCUCUACCUCu 2 14 710 726 [mm9:5:110573938-110573954:+] 0.6196 141 7 -13.41 -0.2995 MIMAT0009435 mmu-miR-1962 231600 Chfr uacacaggGUCACGGUCGGAGa |: | ||||||| gaagcauaCGUUUACAGCCUCc 2 15 423 444 [mm9:5:110600346-110600367:+] 0.5620 142 7 -14.63 -0.6010 MIMAT0009435 mmu-miR-1962 231600 Chfr uacacagGGUCACGGUCGGAGa ::|| :|||||| acuaaaaUUAGGAAUAGCCUCa 2 16 589 610 [mm9:5:110600512-110600533:+] 0.5620 127 6 -15.76 -0.2176 MIMAT0009441 mmu-miR-1968 231600 Chfr ucaggugguaggaauugUCGACGu |||||| uggaacagugaucaauaAGCUGCa 2 8 399 422 [mm9:5:110572576-110572599:+] 0.6841 120 6 -14.99 -0.1010 MIMAT0009444 mmu-miR-1970 231600 Chfr guUUCGGA-UAGGGGUCACUGUGu :||| | ||| :||||||||| ugGAGCGUCAUCGUCAGUGACACa 2 22 152 175 [mm9:5:110600075-110600098:+] 0.5116 172 7 -28.97 -0.4089 MIMAT0009444 mmu-miR-1970 231600 Chfr guuucggAUAGG--GGU-CACUGUGu ||||: : | ||||||| gaugaaaUAUCUGGUGAGGUGACACu 2 17 355 380 [mm9:5:110569435-110569460:+] 0.6903 142 7 -16.30 -0.2079 MIMAT0009445 mmu-miR-1274a 231600 Chfr accgcggacuuGUC-CCUGGACu ||| ||||||| agaggggaguuCAGAGGACCUGc 2 12 1204 1226 [mm9:5:110582237-110582259:+] 0.7706 146 7 -23.23 -0.7717 MIMAT0009445 mmu-miR-1274a 231600 Chfr accGCGGACUUGUCCCUGGACu | :|| : : ||||||| auuCUUCUAGCUCUGGACCUGg 2 20 764 785 [mm9:5:110573992-110574006,110575489-110575495:+] 0.5548 143 7 -18.46 -0.1578 MIMAT0009456 mmu-miR-1839-5p 231600 Chfr guucuGGACA-AG-AUAGAUGGAa ::||| || | ||||||| guacuUUUGUAUCUUUUCUACCUu 2 18 321 344 [mm9:5:110600244-110600267:+] 0.4765 151 7 -16.75 -0.7325 MIMAT0009456 mmu-miR-1839-5p 231600 Chfr guucuggacaagauAGAUGGAa ||||||| uccuccccacggccUCUACCUc 2 9 704 725 [mm9:5:110573932-110573953:+] 0.6196 140 7 -13.86 -0.1021 MIMAT0011211 mmu-miR-2135 231600 Chfr caaAGCCGGGGUUCUGGAGa ||| | :| ||||||| acaUCGACAUC-AGACCUCc 2 18 688 706 [mm9:5:110573916-110573934:+] 0.6418 151 7 -17.70 -0.1802 MIMAT0011222 mmu-miR-2146 231600 Chfr guguaccUUGGGAAGAGGUg |:||:||||||| acucucuAGCCUUUCUCCAg 2 14 837 856 [mm9:5:110575547-110575566:+] 0.5862 157 7 -18.65 -0.4409 MIMAT0012773 mmu-miR-767 231600 Chfr acGAGUCUGUUGGUACCACGu :|:| |:|| : |||||| auUUUA-AUAAGUUUGGUGCu 2 20 501 520 [mm9:5:110600424-110600443:+] 0.5620 125 6 -12.51 -0.1488 MIMAT0015646 mmu-miR-3474 231600 Chfr cuUA-GGUGCAGAGGAGGGUCCc || | |:| :|||||||| ugAUACGAUGAGAUCUCCCAGGc 2 21 272 294 [mm9:5:110569188-110569208,110569373-110569374:+] 0.5990 151 7 -22.20 -0.1666 MIMAT0000121 mmu-let-7g 231600 Chfr uugacaUGUUUGAUGAUGGAGu ||:: || ||||||| cuccccACGGCCU-CUACCUCu 2 17 706 726 [mm9:5:110573934-110573954:+] 0.6196 150 7 -16.42 -0.2754 MIMAT0000122 mmu-let-7i 231600 Chfr uugucGUGUUUGAUGAUGGAGu |||:: || ||||||| cucccCACGGCCU-CUACCUCu 2 18 706 726 [mm9:5:110573934-110573954:+] 0.6196 155 7 -19.79 -0.2730 MIMAT0000124 mmu-miR-15b 231600 Chfr acaUUUGGUAC----UAC----ACGACGAu ||:||||| ||| ||||||| aggAAGCCAUGCCAUAUGCACCUGCUGCUu 2 20 1438 1467 [mm9:5:110587846-110587875:+] 0.7077 149 7 -20.45 -0.1336 MIMAT0000125 mmu-miR-23b 231600 Chfr ccauuagggaccgUUACACUa :|||||| ucgcagugaagaaGAUGUGAg 2 9 1111 1131 [mm9:5:110582144-110582164:+] 0.7706 124 6 -8.48 -0.1673 MIMAT0000127 mmu-miR-29b 231600 Chfr uuguGACUAAAGU--UU---ACCACGAu :| ||||:| || ||||||| auuuUUUAUUUUAAUAAGUUUGGUGCUu 2 20 494 521 [mm9:5:110600417-110600444:+] 0.5620 149 7 -13.07 -1.2003 MIMAT0000135 mmu-miR-125a-5p 231600 Chfr agUGUCCAAUUUCCCAGAGUCCcu ::| || | ||||||| ugGUAACUUUUUGCUUCUCAGGaa 3 23 932 955 [mm9:5:110600855-110600878:+] 0.5964 126 0 -11.27 -0.1763 MIMAT0004528 mmu-miR-125a-3p 231600 Chfr ccGAGGGUUCUUGGAGUGGACa ||:::| :| ||||||| auCUUUUAUUGAAAUCACCUGu 2 21 893 914 [mm9:5:110600816-110600837:+] 0.5964 152 7 -20.34 -1.2790 MIMAT0004528 mmu-miR-125a-3p 231600 Chfr ccgAGGGUUCUUGGAG-UGGACa |:|:: ||: ||| ||||| ccaUUCUGUGAG-CUCAACCUGg 2 20 1604 1625 [mm9:5:110589251-110589260,110591730-110591741:+] 0.7010 121 0 -17.07 -0.1768 MIMAT0000136 mmu-miR-125b-5p 231600 Chfr aguguucAAUCCCAGAGUCCcu || | ||||||| guaacuuUUUGCUUCUCAGGaa 3 16 934 955 [mm9:5:110600857-110600878:+] 0.5964 131 0 -10.58 -0.1747 MIMAT0000142 mmu-miR-9 231600 Chfr agUAUGU-CGAUCUAUUGGUUUCu |||:: | | :|:||||||| aaAUAUGUUCCAUGUGACCAAAGa 2 22 576 599 [mm9:5:110573804-110573827:+] 0.6220 156 7 -16.00 -0.5226 MIMAT0000147 mmu-miR-135a 231600 Chfr aguguauccUUAUUUUUCG-GUAu |||:::|||| ||| uaugguuaaAAUGGGAAGCUCAUa 2 15 355 378 [mm9:5:110600278-110600301:+] 0.5421 122 0 -14.79 -0.5186 MIMAT0000147 mmu-miR-135a 231600 Chfr aguguauccuuaUUUUUCGGUAu |::||||||| gugcccucuucaAGGAAGCCAUg 2 12 1426 1448 [mm9:5:110587834-110587856:+] 0.7077 147 7 -13.57 -0.1438 MIMAT0000147 mmu-miR-135a 231600 Chfr aguguauCCUUAUUUUUC-GGUAu |||| : |||| |||| cuuugcuGGAAAGUAAAGACCAUg 2 17 884 907 [mm9:5:110575594-110575617:+] 0.5759 124 0 -12.42 -0.4711 MIMAT0000149 mmu-miR-137 231600 Chfr gaugcgcauAAGAAUUCGUUAUu ||| ||||||| gaccucucuUUCCCCAGCAAUAa 2 15 298 320 [mm9:5:110569378-110569400:+] 0.6903 146 7 -8.86 -0.3237 MIMAT0000150 mmu-miR-138 231600 Chfr gccggacuaagUGUUGUGGUCGa | :|||||||| ggugacacuggAAGACACCAGCa 2 13 372 394 [mm9:5:110569452-110569472,110572570-110572571:+] 0.6872 148 7 -19.90 -0.5758 MIMAT0000156 mmu-miR-144 231600 Chfr ucauguaguagaUAUGACAu ||||||| gaaggaggagagAUACUGUu 2 9 208 227 [mm9:5:110565202-110565213,110569136-110569143:+] 0.5697 140 7 -7.95 -0.2006 MIMAT0000157 mmu-miR-145 231600 Chfr ucccUAAGGACCCUUUUGACCug |||: | ||||||||| uuauAUUUGUUUGAAAACUGGua 3 20 914 936 [mm9:5:110600837-110600859:+] 0.5964 147 0 -15.11 -0.1272 MIMAT0000159 mmu-miR-149 231600 Chfr cccuCACU---UCUGUGCCUCG-GUCu |||| || :|| |||| ||| acacGUGAAACAGUUACAGAGCACAGg 2 20 13 39 [mm9:5:110599936-110599962:+] 0.4506 122 0 -17.78 -0.2059 MIMAT0000159 mmu-miR-149 231600 Chfr cccucacuucuGUGCCUCGGUCu :|||||||||| ucuaccucuucUACGGAGCCAGa 2 13 718 740 [mm9:5:110573946-110573968:+] 0.5940 156 7 -24.20 -0.1022 MIMAT0000159 mmu-miR-149 231600 Chfr cccUCACUUCUGUGCCUCGGUCu || ||||| |: ||||||| uacAG-GAAGA-AU-GAGCCAGa 2 21 478 497 [mm9:5:110572655-110572674:+] 0.6841 154 7 -21.73 -1.0960 MIMAT0000216 mmu-miR-187 231600 Chfr ggccgacguugUGUUCUGUGCu | :||||||| ----auauuggAAGAGACACGu 2 12 1 18 [mm9:5:110599924-110599941:+] 0.5432 143 7 -15.69 -0.7669 MIMAT0000224 mmu-miR-194 231600 Chfr agguGUACCUCAA--CGACAAUGu :|| || | ||||||: cuuuUAUUGAAAUCACCUGUUAUa 2 19 895 918 [mm9:5:110600818-110600841:+] 0.5964 125 0 -10.46 -0.1751 MIMAT0000225 mmu-miR-195 231600 Chfr cgGUUAUAAAGACACGACGAu | |||| ||||||| ugCCAUAUGCACCUGCUGCUu 2 20 1447 1467 [mm9:5:110587855-110587875:+] 0.7077 147 7 -17.22 -0.1310 MIMAT0000229 mmu-miR-199a-5p 231600 Chfr cuuGUCCAUCAGACUUGUGACCc | |||: || ||||||| uauCUGGUGAGGUG-ACACUGGa 2 21 362 383 [mm9:5:110569442-110569463:+] 0.6903 150 7 -18.19 -0.2987 MIMAT0000235 mmu-miR-202-3p 231600 Chfr agaagGGUACGCGAUAUGGAGa | |||:| ||||||| gaacaCAAUGUGGCAUACCUCu 2 18 496 517 [mm9:5:110572673-110572679,110573610-110573624:+] 0.6724 157 7 -19.10 -0.4265 MIMAT0000247 mmu-miR-143 231600 Chfr cucGAUGUCACGAAGUAG-AGu :|:::| || ||||| || ccuUUGUGGAGCGUCAUCGUCa 2 19 146 167 [mm9:5:110600069-110600090:+] 0.5116 122 0 -13.77 -0.1331 MIMAT0000366 mmu-miR-290-5p 231600 Chfr uuucACGGGGGUAUCAAACUca ||:: : | |||||| caccUGUUAUAUUUGUUUGAaa 3 19 908 929 [mm9:5:110600831-110600852:+] 0.5964 126 0 -8.69 -0.1423 MIMAT0000369 mmu-miR-292-5p 231600 Chfr guuuucucggggguCAAACUca |||||| caccuguuauauuuGUUUGAaa 3 9 908 929 [mm9:5:110600831-110600852:+] 0.5964 120 0 -6.31 -0.1409 MIMAT0004576 mmu-miR-296-3p 231600 Chfr ccUCUCGGAGGUG---GGUU-GGGAg ||:||||:::| |||| |||| acAGGGCCUUUGCUUUCCAAGCCCUc 2 21 791 816 [mm9:5:110600714-110600739:+] 0.4667 131 0 -28.56 -0.2180 MIMAT0000380 mmu-miR-302a 231600 Chfr aguGGUUUUGUACCUUCGU--GAAu ||||:||| |||||| ||| uuuCCAAGACAAAGAAGCAUCCUUu 2 21 858 882 [mm9:5:110575568-110575592:+] 0.5836 128 0 -19.92 -0.3156 MIMAT0000383 mmu-let-7d 231600 Chfr uugauacGUUGGAUGAUGGAGa |::||| ||||||| cuccccaCGGCCU-CUACCUCu 2 16 706 726 [mm9:5:110573934-110573954:+] 0.6196 153 7 -23.65 -0.2754 MIMAT0000516 mmu-miR-148a 231600 Chfr ugUUUCAAGA-CA--UCAC-GUGACu ||| ||| || :||| ||||| ugAAAUAUCUGGUGAGGUGACACUGg 2 21 357 382 [mm9:5:110569437-110569462:+] 0.6903 122 0 -17.35 -0.3220 MIMAT0000521 mmu-let-7a 231600 Chfr uugauaUGUUGGAUGAUGGAGu ||::||| ||||||| cuccccACGGCCU-CUACCUCu 2 17 706 726 [mm9:5:110573934-110573954:+] 0.6196 158 7 -22.23 -0.2730 MIMAT0000522 mmu-let-7b 231600 Chfr uuGGUGUGUUGGAUGAUGGAGu || |||::||| ||||||| cuCCCCACGGCCU-CUACCUCu 2 21 706 726 [mm9:5:110573934-110573954:+] 0.6196 170 7 -28.71 -0.2707 MIMAT0000523 mmu-let-7c 231600 Chfr uuGGUAUGUUGGAUGAUGGAGu || ||::||| ||||||| cuCCCCACGGCCU-CUACCUCu 2 21 706 726 [mm9:5:110573934-110573954:+] 0.6196 162 7 -26.38 -0.2730 MIMAT0000524 mmu-let-7e 231600 Chfr uugauaUGUUGGAGGAUGGAGu ||::||| ||||||| cuccccACGGCCU-CUACCUCu 2 17 706 726 [mm9:5:110573934-110573954:+] 0.6196 158 7 -22.23 -0.2730 MIMAT0000525 mmu-let-7f 231600 Chfr uugauaUGUUAGAUGAUGGAGu ||:: || ||||||| cuccccACGGCCU-CUACCUCu 2 17 706 726 [mm9:5:110573934-110573954:+] 0.6196 150 7 -17.55 -0.2754 MIMAT0000526 mmu-miR-15a 231600 Chfr guGUUUGGUAAUAC----ACGACGAu || :||| |||| ||||||| gcCAUGCCA-UAUGCACCUGCUGCUu 2 21 1443 1467 [mm9:5:110587851-110587875:+] 0.7077 153 7 -18.74 -0.1349 MIMAT0000527 mmu-miR-16 231600 Chfr gcgGUUAUAAAUGCACGACGAu | |||| || ||||||| augCCAUAUGCACCUGCUGCUu 2 20 1446 1467 [mm9:5:110587854-110587875:+] 0.7077 163 7 -22.25 -0.1310 MIMAT0000530 mmu-miR-21 231600 Chfr agUUGUAGUCAGACUAUUCGAu |||| :: || ||||||| ggAACAGUGAUC-AAUAAGCUg 2 21 400 420 [mm9:5:110572577-110572597:+] 0.6841 154 7 -13.00 -0.4936 MIMAT0000532 mmu-miR-23a 231600 Chfr ccuuuagggaccgUUACACUa :|||||| ucgcagugaagaaGAUGUGAg 2 9 1111 1131 [mm9:5:110582144-110582164:+] 0.7706 124 6 -8.63 -0.1673 MIMAT0000533 mmu-miR-26a 231600 Chfr ucGGAUAG--GACC-UA--AUGAACUu | |:|| |||| || ||||||| gcCAUGUCAUCUGGAAUAAUACUUGAa 2 21 835 861 [mm9:5:110600758-110600784:+] 0.5442 153 7 -21.86 -1.2278 MIMAT0000534 mmu-miR-26b 231600 Chfr uggaUAGGACUUA--AUGAACUu |||: |||| ||||||| ugucAUCUGGAAUAAUACUUGAa 2 18 839 861 [mm9:5:110600762-110600784:+] 0.5442 160 7 -16.04 -1.2278 MIMAT0000535 mmu-miR-29a 231600 Chfr auuggcuaaagucuACCACGAu ||||||| uauuuuaauaaguuUGGUGCUu 2 9 500 521 [mm9:5:110600423-110600444:+] 0.5620 140 7 -12.41 -1.2003 MIMAT0000536 mmu-miR-29c 231600 Chfr auuggcUAAAGU--UU---ACCACGAu ||||:| || ||||||| uuuuuuAUUUUAAUAAGUUUGGUGCUu 2 17 495 521 [mm9:5:110600418-110600444:+] 0.5620 146 7 -13.07 -1.2003 MIMAT0000541 mmu-miR-96 231600 Chfr ucgUUUUUACACGAU-CAC-GGUUu ||| |||| | | ||| |||| ggaAAAUAUGUUCCAUGUGACCAAa 2 21 573 597 [mm9:5:110573801-110573825:+] 0.6220 131 0 -13.44 -0.5322 MIMAT0000542 mmu-miR-34a 231600 Chfr ugUUGGUCGAUUCUGU-GACGGu |: || || ||| ||||| ggAGGCACCUUCAACAUCUGCCa 2 21 1378 1400 [mm9:5:110583967-110583989:+] 0.5440 120 0 -16.54 -0.1638 MIMAT0000545 mmu-miR-98 231600 Chfr uuguuaUGUUGAAUGAUGGAGu ||::| | ||||||| cuccccACGGCCU-CUACCUCu 2 17 706 726 [mm9:5:110573934-110573954:+] 0.6196 150 7 -16.35 -0.2730 MIMAT0000546 mmu-miR-103 231600 Chfr agUAUCGGGACAUGU-UACGACGa | | | || | | ||||||| uaAAAUCACUCAAGAUAUGCUGCa 2 22 1150 1173 [mm9:5:110582183-110582206:+] 0.7706 148 7 -12.66 -1.2183 MIMAT0000548 mmu-miR-322 231600 Chfr agguuuUGUAC-UUAACGACGAc |:||| | ||||||| caugccAUAUGCACCUGCUGCUu 2 17 1445 1467 [mm9:5:110587853-110587875:+] 0.7077 151 7 -15.42 -0.1310 MIMAT0000555 mmu-miR-324-5p 231600 Chfr ugugguuacgggauccCCUACGc |||||| aagaugugagaaguauGGAUGCa 2 8 1122 1144 [mm9:5:110582155-110582177:+] 0.7706 120 6 -10.67 -0.2219 MIMAT0000559 mmu-miR-326 231600 Chfr ugaccuccuucCCGGGUCUCc | ||||||| uuccuugcccaGUCCCAGAGa 2 11 1326 1346 [mm9:5:110583915-110583935:+] 0.5440 142 7 -13.41 -0.1809 MIMAT0004642 mmu-miR-330 231600 Chfr cggauucUGUGUCCGGGUCUCu :| ||| ||||||| cuuccuuGCCCAGUCCCAGAGa 2 16 1325 1346 [mm9:5:110583914-110583935:+] 0.5440 155 7 -24.60 -0.1792 MIMAT0000580 mmu-miR-148b 231600 Chfr ugUUUCAAGA-CACU--AC-GUGACu ||| ||| |||| || ||||| ugAAAUAUCUGGUGAGGUGACACUGg 2 21 357 382 [mm9:5:110569437-110569462:+] 0.6903 126 0 -17.56 -0.3220 MIMAT0000584 mmu-miR-339-5p 231600 Chfr gcacUCGAGGACCUCCUGUCCCu :||||| | ||||||| agauGGCUCCAGACUGACAGGGc 2 20 775 797 [mm9:5:110600698-110600720:+] 0.4279 159 7 -23.70 -0.1184 MIMAT0004651 mmu-miR-340-5p 231600 Chfr uuagucagaguaacgAAAUAUu |||||| gcacaaauacuauaaUUUAUAa 2 8 556 577 [mm9:5:110600479-110600500:+] 0.5620 120 6 -4.57 -0.3096 MIMAT0000590 mmu-miR-342-3p 231600 Chfr ugcccACGCUAAAGACACACUCu ||| | :|||||||| ccuucUGC-ACGAUUGUGUGAGa 2 19 1083 1104 [mm9:5:110580685-110580705,110582137-110582137:+] 0.7171 148 7 -19.55 -1.0081 MIMAT0000590 mmu-miR-342-3p 231600 Chfr ugcccacgcuaaagacACACUCu |||||| gucgcagugaagaagaUGUGAGa 2 8 1110 1132 [mm9:5:110582143-110582165:+] 0.7706 120 6 -15.08 -0.1461 MIMAT0000609 mmu-miR-351 231600 Chfr guccgaguuuccCGAGGAGUCCcu |||:|||||| ugguaacuuuuuGCUUCUCAGGaa 3 13 932 955 [mm9:5:110600855-110600878:+] 0.5964 136 0 -18.63 -0.1797 MIMAT0000612 mmu-miR-135b 231600 Chfr aguguauccUUACUUUUCG-GUAu ||||::|||| ||| uaugguuaaAAUGGGAAGCUCAUa 2 15 355 378 [mm9:5:110600278-110600301:+] 0.5421 126 0 -17.16 -0.5186 MIMAT0000612 mmu-miR-135b 231600 Chfr aguguauccuuacUUUUCGGUAu ::||||||| gugcccucuucaaGGAAGCCAUg 2 11 1426 1448 [mm9:5:110587834-110587856:+] 0.7077 142 7 -13.04 -0.1438 MIMAT0000612 mmu-miR-135b 231600 Chfr aguguauCCUUACUUUUC-GGUAu |||| | |||| |||| cuuugcuGGAAAGUAAAGACCAUg 2 17 884 907 [mm9:5:110575594-110575617:+] 0.5759 128 0 -12.75 -0.4711 MIMAT0000647 mmu-miR-107 231600 Chfr acUAUCGGGACAUGU-UACGACGa | | | || | | ||||||| uaAAAUCACUCAAGAUAUGCUGCa 2 22 1150 1173 [mm9:5:110582183-110582206:+] 0.7706 148 7 -12.66 -1.2183 MIMAT0000656 mmu-miR-139-5p 231600 Chfr gaccucugugcacgUGACAUCu ||||||| uuuaaauauuaaaaACUGUAGc 2 9 536 557 [mm9:5:110600459-110600480:+] 0.5620 140 7 -10.04 -1.1948 MIMAT0000661 mmu-miR-214 231600 Chfr ugacggacagacACGGACGACa | ||||||| ccugagagcaacUCCCUGCUGa 2 11 747 768 [mm9:5:110600670-110600691:+] 0.4505 142 7 -18.60 -0.2313 MIMAT0000661 mmu-miR-214 231600 Chfr ugACGGACAGACACGGACGACa |||| | || ||||||| caUGCC-AUAUGCACCUGCUGc 2 21 1445 1465 [mm9:5:110587853-110587873:+] 0.7077 154 7 -19.70 -0.3707 MIMAT0000663 mmu-miR-218 231600 Chfr uguaccaaucuaguUCGUGUu |||||| auauuaaaaacuguAGCACAa 2 8 541 561 [mm9:5:110600464-110600484:+] 0.5620 120 6 -8.78 -0.2469 MIMAT0000668 mmu-miR-211 231600 Chfr uccgUUUCCUACUGUUUCC-CUu ||| |||| ||||| || aaaaAAAAGAUG--AAAGGAGAu 2 19 925 945 [mm9:5:110575635-110575653,110580546-110580547:+] 0.5324 123 0 -10.08 -0.1931 MIMAT0000669 mmu-miR-221 231600 Chfr cuuuggGUCGUCUGUUACAUCGa :| :| | | |||||| uuuaaaUAUUAAAAACUGUAGCa 2 18 536 558 [mm9:5:110600459-110600481:+] 0.5620 121 6 -6.81 -0.3693 MIMAT0000670 mmu-miR-222 231600 Chfr ugggucaucggucuACAUCGa |||||| uaaauauuaaaaacUGUAGCa 2 8 538 558 [mm9:5:110600461-110600481:+] 0.5620 120 6 -6.88 -0.3664 MIMAT0000711 mmu-miR-365 231600 Chfr uauuccuaaAAAUCCCCGUAAu || | ||||||| uacaaacacUUGAAGGGCAUUu 2 14 65 86 [mm9:5:110599988-110600009:+] 0.4749 149 7 -11.17 -0.7839 MIMAT0000741 mmu-miR-377 231600 Chfr uguuuucaacggaAACACACUa |||||||| accuucugcacgaUUGUGUGAg 2 10 1082 1103 [mm9:5:110580684-110580705:+] 0.6637 145 7 -12.18 -0.4790 MIMAT0000766 mmu-miR-335-5p 231600 Chfr ugUAAAA---AGCAAU--AACGAGAACu ||||| :|||: ||||||||| aaAUUUUCAACUGUUGUCUUGCUCUUGa 2 22 958 985 [mm9:5:110600881-110600908:+] 0.5964 159 7 -19.14 -1.1151 MIMAT0001091 mmu-miR-410 231600 Chfr uguccgguagacACAAUAUAa |||||||| auugaaaucaccUGUUAUAUu 2 10 900 920 [mm9:5:110600823-110600843:+] 0.5964 145 7 -9.22 -1.0301 MIMAT0001092 mmu-miR-376b 231600 Chfr uuCACCUACAAGGAGAUACUa |||| | ||||||||| auGUGG-CAUACCUCUAUGAa 2 20 503 522 [mm9:5:110573610-110573629:+] 0.6606 157 7 -19.31 -0.6983 MIMAT0001542 mmu-miR-449a 231600 Chfr ugGUCGAUU-GUUAU-GU-GACGGu || |||| | :|| || ||||| gaCA-CUAACCUGUAUCAUCUGCCa 2 21 1056 1079 [mm9:5:110580658-110580681:+] 0.6637 120 0 -18.48 -0.2168 MIMAT0003128 mmu-miR-485 231600 Chfr cuuaaGUAGUGCCG--GUCGGAGa ||| ||| : ||||||| ggaagCAU-ACGUUUACAGCCUCc 2 18 422 444 [mm9:5:110600345-110600367:+] 0.5620 146 7 -20.00 -0.5937 MIMAT0003128 mmu-miR-485 231600 Chfr cuuaagUAGUGCCGGUCGGAGa ||:| | :|||||| acuaaaAUUAGGAAUAGCCUCa 2 17 589 610 [mm9:5:110600512-110600533:+] 0.5620 136 6 -14.79 -0.2117 MIMAT0003130 mmu-miR-486 231600 Chfr gagccccgucgaguCAUGUCCu ||||||| aucaucuauuugguGUACAGGa 2 9 463 484 [mm9:5:110572640-110572661:+] 0.6841 140 7 -16.09 -0.9236 MIMAT0003182 mmu-miR-494 231600 Chfr cuccaaagggcacAUACAAAGu |||||||| ggaagaaugagcaUAUGUUUCu 2 10 616 637 [mm9:5:110600539-110600560:+] 0.5620 145 7 -8.61 -0.7954 MIMAT0003374 mmu-miR-302b 231600 Chfr gauGAUUUUGUACCUUCGU--GAAu | ||:||| |||||| ||| uuuCCAAGACAAAGAAGCAUCCUUu 2 21 858 882 [mm9:5:110575568-110575592:+] 0.5836 120 0 -12.96 -0.3156 MIMAT0003893 mmu-miR-761 231600 Chfr acACAGUCAAAGUGGGACGACg || || | |||||||| ccUGAGAGCAACUCCCUGCUGa 2 21 747 768 [mm9:5:110600670-110600691:+] 0.4505 152 7 -19.09 -0.2292 MIMAT0003893 mmu-miR-761 231600 Chfr acACAGUCAAAGUGGGACGACg || || | || ||||||| caUGCCAUAUGCA-CCUGCUGc 2 21 1445 1465 [mm9:5:110587853-110587873:+] 0.7077 154 7 -18.79 -0.3456 MIMAT0003738 mmu-miR-496 231600 Chfr cucuaaccgguacaUUAUGAgu |||||| aaaacuguagcacaAAUACUau 3 9 547 568 [mm9:5:110600470-110600491:+] 0.5620 120 0 -5.47 -0.1048 MIMAT0003453 mmu-miR-497 231600 Chfr auGUUUGGUGUCAC----ACGACGAc || :|||:| || ||||||| gcCAUGCCAUA-UGCACCUGCUGCUu 2 21 1443 1467 [mm9:5:110587851-110587875:+] 0.7077 149 7 -18.35 -0.1323 MIMAT0003456 mmu-miR-495 231600 Chfr uucUUCACGUGGUACAAACAAa || || :|::|||||||| aauAAAUGAGCUGUGUUUGUUu 2 20 1042 1063 [mm9:5:110600965-110600986:+] 0.4747 167 7 -13.91 -0.4139 MIMAT0003456 mmu-miR-495 231600 Chfr uucuucacgugguacAAACAAa |||||| aauaauacuugaaauUUUGUUu 2 8 849 870 [mm9:5:110600772-110600793:+] 0.5442 120 6 -5.70 -0.1012 MIMAT0004853 mmu-miR-874 231600 Chfr agccagGGAGCCCGGUCCCGUc |||| | ||||||| agcugaCCUCUG--CAGGGCAa 2 17 740 759 [mm9:5:110573968-110573987:+] 0.5684 149 7 -18.84 -0.1871 MIMAT0004854 mmu-miR-876-5p 231600 Chfr aucACUA-AGUGUCUCUUUAGgu | || |: :| |||||| uuuUUAUCUUUUAUUGAAAUCac 3 20 888 910 [mm9:5:110600811-110600833:+] 0.5964 126 0 -7.05 -0.1257 MIMAT0004869 mmu-miR-421 231600 Chfr cgcggguUAAUUACAGACAACUa | |: | |||||||| gagagauACUGUUAUCUGUUGAg 2 17 215 237 [mm9:5:110565209-110565213,110569136-110569153:+] 0.5697 152 7 -10.37 -0.3585 MIMAT0004895 mmu-miR-590-5p 231600 Chfr gaCGUGAAAAUACUUAUUCGAg | || | || |||||||| ugGAACAGUGAUCAAUAAGCUg 2 21 399 420 [mm9:5:110572576-110572597:+] 0.6841 160 7 -9.76 -0.4936 MIMAT0004896 mmu-miR-590-3p 231600 Chfr ugaucgAAUAUGUAUUUUAAu ||: || ||||||| uacaaaUUG-AC-UAAAAUUa 2 16 580 598 [mm9:5:110600503-110600521:+] 0.5620 143 7 -5.13 -0.9033 MIMAT0004896 mmu-miR-590-3p 231600 Chfr ugauCGAAU--AUGUAUUUUAAu |:||| || | |||||| uucuGUUUAUUUAAAAAAAAUUa 2 18 634 656 [mm9:5:110600557-110600579:+] 0.5365 128 6 -7.51 -0.1551 MIMAT0004896 mmu-miR-590-3p 231600 Chfr ugAUCGAAUA-UGUAU-UUUAAu || :|||| |: || ||||| uaUAAUUUAUAAUUUACAAAUUg 2 20 566 588 [mm9:5:110600489-110600511:+] 0.5620 126 0 -5.33 -1.1687 MIMAT0005447 mmu-miR-449b 231600 Chfr cgGUCGAUUGUUGU-GACGGa || || ||||| ||||| ggCACCU-UCAACAUCUGCCa 2 19 1381 1400 [mm9:5:110583970-110583989:+] 0.5440 124 0 -16.96 -0.1670 MIMAT0005850 mmu-miR-1192 231600 Chfr uuaaACCAGACAAACAAACAAa || ||| |||||||| uaaaUGAGCUG--UGUUUGUUu 2 19 1044 1063 [mm9:5:110600967-110600986:+] 0.4747 151 7 -12.95 -0.4108

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G036882 Chfr Mus musculus 231600 19536157 0 0 R52393; MOUSE$CHFR_01; Binding factors: mmu-miR-1897-5p , mmu-miR-9-5p // 0 0 R52394; MOUSE$CHFR_02; Binding factors: mmu-miR-103-3p , mmu-miR-107-3p , mmu-miR-15a-5p , mmu-miR-15b-5p , mmu-miR-16-5p , mmu-miR-1906 , mmu-miR-1907 , mmu-miR-195a-5p , mmu-miR-322-5p , mmu-miR-497a-5p , mmu-miR-761

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Chfr mmu-miR-201 beg:244 end:258 pic:3' TTCTTGTTACGGAATGACTCAT 5'& |. ||||||| &5' ---------GTAG-ACTGAGT- 3' Chfr mmu-miR-466k beg:161 end:180 pic:3' AGTGTACATGTACATGTGTGTGT 5'& || .|| ||||||||| &5' ------GTCAGTG-ACACACACA 3' Chfr mmu-miR-466d-5p beg:161 end:181 pic:3' GTACATGTACATGCGTGTGTGT 5'& || .|| || ||||||| &5' ---GTCAGTG-ACACACACAC- 3' Chfr mmu-miR-485 beg:426 end:444 pic:3' CTTAAGTAGTGCCG--GTCGGAGA 5'& || .||| ||||||| &5' -----CA-TACGTTTACAGCCTC- 3' Chfr mmu-miR-1962 beg:429 end:444 pic:3' TACACAGGGTCACGGTCGGAGA 5'& ||.. ||||||| &5' ----GTTTA-----CAGCCTC- 3' Chfr mmu-miR-202-5p beg:364 end:383 pic:3' TTTCTTCATATACGTATCCTT 5'& ..|||| |||||||| &5' -GGGAAGCT----CATAGGAA 3' Chfr mmu-miR-202-5p beg:442 end:459 pic:3' TTTCTTCATATACGTATCCTT 5'& ||..||| ||||||| &5' --AGGGGTA----CATAGGA- 3' Chfr mmu-miR-331-3p beg:435 end:451 pic:3' AAGATCCTATCCG-GGTCCCCG 5'& || | |||||||. &5' ---------AGCCTCCAGGGGT 3' Chfr mmu-miR-3475 beg:436 end:448 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||||||||. &5' ------------GCCTCCAGG 3' Chfr mmu-miR-214 beg:751 end:768 pic:3' TGACGGACAGACACGGACGACA 5'& || || ||||||| &5' ---GCAACTC----CCTGCTG- 3' Chfr mmu-miR-761 beg:755 end:768 pic:3' ACACAGTCAAAGTGGGACGACG 5'& | |||||||| &5' -----------CTCCCTGCTG- 3' Chfr mmu-miR-324-3p beg:289 end:308 pic:3' TCGTCGTGGACCCCGTCACC 5'& |. | |. ||||||| &5' -GT-GTGCTGA-GGCAGTG- 3' Chfr mmu-miR-365 beg:76 end:86 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& ||||||| &5' --------------GGGCATT- 3' Chfr mmu-miR-872 beg:188 end:199 pic:3' GGACTTGATTGTTCATTGGAA 5'& |||||||| &5' ------------AGTAACCT- 3' Chfr mmu-miR-532-3p beg:1004 end:1022 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |. || |||||||| &5' ------CTGTGTTTGTGGGAG- 3' Chfr mmu-miR-1192 beg:1045 end:1064 pic:3' TTAAACCAGACAAACAAACAAA 5'& || |||| |||||||| &5' ----TGAGCTGT--GTTTGTTT 3' Chfr mmu-miR-495 beg:1045 end:1064 pic:3' TTCTTCACGTGGTACAAACAAA 5'& || .|..||||||||| &5' ------TGAGCTGTGTTTGTTT 3' Chfr mcmv-miR-m59-1 beg:657 end:678 pic:3' GACTGCCA-GCTCCGTGACGATT 5'& || || ||| |||||||| &5' ---ACTGTCCGAA--ACTGCTAA 3' Chfr mmu-let-7astar beg:469 end:495 pic:3' CCTTTCTGTCATCT--AACATATC 5'& ||||||||| ||||||| &5' GGAAAGACACAGCCTTTTGTATA- 3' Chfr mmu-let-7c-2star beg:469 end:495 pic:3' CCTTTCTGTCATCT--AACATATC 5'& ||||||||| ||||||| &5' GGAAAGACACAGCCTTTTGTATA- 3' Chfr mmu-let-7gstar beg:293 end:317 pic:3' CG-TTCCGTCACCGGACATGTCA 5'& || .|||||||| | ||.||| &5' GCTGAGGCAGTGA-CAGTGCAG- 3' Chfr mmu-miR-106a beg:309 end:328 pic:3' GATGGACGTGACAATCGTGAAAC 5'& |||| ||| |.||||| &5' -----TGCAG-GTTTGTACTTT- 3' Chfr mmu-miR-1188 beg:161 end:183 pic:3' AGGACCGGG--TTG-GAGTGTGGT 5'& |.| .|| | ||||||| &5' -----GTCAGTGACACACACACCA 3' Chfr mmu-miR-1188 beg:200 end:221 pic:3' AGGACCGGGTTGGA---GTGTGGT 5'& ||||. ||| ||||||| &5' ----GGCCT--CCTGGCCACACCA 3' Chfr mmu-miR-1190 beg:376 end:396 pic:3' CTGTCTCCCCTT----GGAGTCGACT 5'& |||| . ||||||| &5' --------GGAAAAGTTGTCAGCTG- 3' Chfr mmu-miR-141star beg:1002 end:1025 pic:3' AGGTTGTGACGTG---ACCTTCTAC 5'& || ||| . |||.||||| &5' ----ACTCTGTGTTTGTGGGAGATG 3' Chfr mmu-miR-145star beg:943 end:956 pic:3' GTTCTTGTCATAAAG-GTCCTTA 5'& ||| |||||| &5' ------------TTCTCAGGAA- 3' Chfr mmu-miR-145star beg:433 end:451 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||| ||||||..| &5' -----ACAGCC--TCCAGGGGT 3' Chfr mmu-miR-146a beg:76 end:98 pic:3' TTGGGTACCT-TAA----GTCAAGAGT 5'& ||. ||| |||||.|| &5' -------GGGCATTTTTACAGTTTTC- 3' Chfr mmu-miR-150 beg:1002 end:1023 pic:3' GTGAC-CATGTTCCCAACCCTCT 5'& | ||| || ||||||| &5' CTCTGTGTTTG-----TGGGAGA 3' Chfr mmu-miR-152 beg:110 end:132 pic:3' GGTTCAAGA-CAGTACGTGACT 5'& ..||||| |||| ||||||. &5' --GGGTTCTGGTCAGGCACTGG 3' Chfr mmu-miR-154 beg:596 end:609 pic:3' GCTTCCGTTGTGCC-TATTGGAT 5'& || |||.||| &5' ------------GGAATAGCCT- 3' Chfr mmu-miR-1839-5p beg:323 end:345 pic:3' GTTCTGGACA-AGAT-AGATGGAA 5'& ..||| ||| |||||||| &5' -----TTTGTATCTTTTCTACCTT 3' Chfr mmu-miR-186 beg:1014 end:1032 pic:3' TCGGGTTTTCCTCT--TAAGAAAC 5'& .||||| .|||||| &5' --------GGGAGATGGTTCTTT- 3' Chfr mmu-miR-188-3p beg:999 end:1022 pic:3' ACGTTTGGGACGTACACCCTC 5'& |.| |. ||. |||||||| &5' -GTACTCTGTGTTTGTGGGAG 3' Chfr mmu-miR-1892 beg:279 end:302 pic:3' TAGGAGGGAGGGCA-GGGGTTTA 5'& .||||||||.|| . | |. &5' --TCTCCCTCCTGTGTGCTGAG- 3' Chfr mmu-miR-1898 beg:338 end:356 pic:3' CTAGGGGACACTTGGAACTGGA 5'& ||.||| ||||||||. &5' ----CCTTGT--ACCTTGACT- 3' Chfr mmu-miR-18a beg:335 end:353 pic:3' GATAGACGTGATCT-ACGTGGAAT 5'& ||| ||.|||||. &5' ---------CTACCTTGTACCTTG 3' Chfr mmu-miR-18b beg:335 end:353 pic:3' GATTGTCGTGATCT-ACGTGGAAT 5'& ||| ||.|||||. &5' ---------CTACCTTGTACCTTG 3' Chfr mmu-miR-1927 beg:429 end:451 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||.. |.| |||||.||| &5' ---GTTTACAGCCTCCAGGGGT- 3' Chfr mmu-miR-1928 beg:715 end:731 pic:3' CTCGACCGTTACATCGA 5'& |.|||||| || ||| &5' GGGCTGGC--TG-AGC- 3' Chfr mmu-miR-1935 beg:783 end:806 pic:3' TCTCTAGGC-GG-TCGGAGACGGA 5'& ||| |.| | .||||.|||.| &5' --AGA-CTGACAGGGCCTTTGCTT 3' Chfr mmu-miR-1940 beg:426 end:446 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& .|| ||. ||| |||||| &5' --------TACGTTTACAG-CCTCCA- 3' Chfr mmu-miR-1953 beg:128 end:148 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |..|. || | |.|||||| &5' --GGGGTGTG-G-ATTTTCCC- 3' Chfr mmu-miR-1957 beg:910 end:934 pic:3' CAGTAT--ACGAGATGGTGAC 5'& ||.||| ||.|. |||| &5' GTTATATTTGTTTGAAAACTG 3' Chfr mmu-miR-1960 beg:111 end:133 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .|..|| || .||||||| &5' GGTTCTGGTCA---GGCACTGG 3' Chfr mmu-miR-1960 beg:89 end:113 pic:3' TCGGGAGAAGAT-TGTCGTGACC 5'& ||...|| ||| .||||||||| &5' AGTTTTCC-CTACGCAGCACTGG 3' Chfr mmu-miR-1962 beg:204 end:226 pic:3' TACACAGGGTCAC---GGTCGGAGA 5'& ||| | |||||||. &5' -----TCCTGGCCACACCAGCCTT- 3' Chfr mmu-miR-1967 beg:326 end:352 pic:3' CGTAGAAGAGG-GGTCCTAGGAGT 5'& |.|||||.||. || |||. &5' GTATCTTTTCTACCTTGTACCTT- 3' Chfr mmu-miR-1970 beg:150 end:176 pic:3' GTTTCGGA-TAGGGGTCACTGTGT 5'& ..||| | ||| .|||||||||| &5' -GGAGCGTCATCGTCAGTGACACA 3' Chfr mmu-miR-1971 beg:785 end:804 pic:3' AGAGTCGGGTCGGAAATG 5'& || | | .||||||.| &5' -CTGA-CAGGGCCTTTGC 3' Chfr mmu-miR-1981 beg:780 end:804 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& ||| | ||.| | .||||||.| &5' -CCA-GACTGA-CAGGGCCTTTGC 3' Chfr mmu-miR-1982.2 beg:116 end:137 pic:3' GACACCCTCTTGT-ATCCCACT 5'& ||| ..|| |.||||| &5' ---TGGTCAGGCACTGGGGTG- 3' Chfr mmu-miR-199a-5p beg:116 end:134 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |.||| ..||||||| &5' -------TGGTCA-GGCACTGGG 3' Chfr mmu-miR-199bstar beg:116 end:134 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |.||| |..||||||| &5' -------TGGTC-AGGCACTGGG 3' Chfr mmu-miR-20a beg:68 end:88 pic:3' GATGGACGTGATA--TTCGTGAAAT 5'& |||| ..|||.||| &5' -------CACTTGAAGGGCATTTT- 3' Chfr mmu-miR-21 beg:501 end:519 pic:3' AGTTGTAGTCAGACTATTCGAT 5'& |.||.| |||.||.| ||| &5' TTAATA--AGTTTGGT--GCT- 3' Chfr mmu-miR-2134 beg:705 end:722 pic:3' CGTGGGGCAAAGGGTTCTG 5'& ||.|| ||||.|.| &5' ---CCTCGA--CCCAGGGC 3' Chfr mmu-miR-218 beg:22 end:39 pic:3' TGTACCAATCTAGTTCGTGTT 5'& |||| .||||||. &5' -----GTTACA--GAGCACAG 3' Chfr mmu-miR-219 beg:453 end:464 pic:3' TCTTAACGCAAACCTGTTAGT 5'& |||.|.|| &5' ------------GGATAGTC- 3' Chfr mmu-miR-223 beg:781 end:794 pic:3' ACCCCATAAACTGTTTGACTGT 5'& ||.||||||| &5' ------------CAGACTGACA 3' Chfr mmu-miR-223 beg:574 end:591 pic:3' ACCCCATAAACTGTTTGACTGT 5'& |||| |||||.|||| &5' ------ATTT-ACAAATTGAC- 3' Chfr mmu-miR-24 beg:712 end:732 pic:3' GACAAGGA--CGACTTGACTCGGT 5'& || |||| .||||||| &5' -----CCAGGGCTG-GCTGAGCC- 3' Chfr mmu-miR-26a beg:841 end:862 pic:3' TCGGATAGGACCTA---ATGAACTT 5'& .||||| |||||||| &5' -------TCTGGAATAATACTTGAA 3' Chfr mmu-miR-26b beg:840 end:862 pic:3' TGGATAGGACTTA--ATGAACTT 5'& |||. |||| |||||||| &5' ----ATCTGGAATAATACTTGAA 3' Chfr mmu-miR-290-3p beg:70 end:88 pic:3' CCCGAATTTTGATCCGCCGTGAAA 5'& |||.||. ||||.||| &5' ---CTTGAAG------GGCATTTT 3' Chfr mmu-miR-291b-5p beg:1017 end:1040 pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& ||||| ||. . .||||||. &5' GGAGATGGTTCTTTTTTTGATT 3' Chfr mmu-miR-292-3p beg:67 end:88 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& ||||| ||. ||||.||| &5' ACACTTGAAG------GGCATTTT 3' Chfr mmu-miR-296-3p beg:720 end:742 pic:3' CCT-CTCGGAGGTGGGTTGGGAG 5'& || ||||| |..|.||||| &5' GGCTGAGCC----CTTAGCCCTC 3' Chfr mmu-miR-29b beg:511 end:521 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& ||||||| &5' ---------------TGGTGCT- 3' Chfr mmu-miR-29c beg:511 end:521 pic:3' ATTGGCTAAAGTTTACCACGAT 5'& ||||||| &5' --------------TGGTGCT- 3' Chfr mmu-miR-300 beg:480 end:495 pic:3' CTTCTCTCGAACGG-GAACGTAT 5'& ||| .|||.||| &5' -----------GCCTTTTGTATA 3' Chfr mmu-miR-30astar beg:975 end:999 pic:3' CGACGT---TTGTAGGCTGACTTTC 5'& .||| .|.| ||||||.|| &5' -TTGCTCTTGATACA-GACTGAGAG 3' Chfr mmu-miR-30c-2star beg:251 end:273 pic:3' TCTCATTTGTCGGAA-GAGGGTC 5'& |||| | ||| |||||| &5' -GAGTT--CTCCCTCCCTCCCA- 3' Chfr mmu-miR-30estar beg:975 end:999 pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||| .|.| ||||||.|| &5' GCTCTTGATACA-GACTGAGAG 3' Chfr mmu-miR-31 beg:387 end:413 pic:3' GTCGATACGGT---CGTAGAACGGA 5'& |||||.||.|| |||| | || &5' CAGCTGTGTCAGACGCATTCT-CC- 3' Chfr mmu-miR-33 beg:299 end:316 pic:3' ACGTTACGTTGATGTTACGTG 5'& |||.|| |||.|||| &5' -GCAGTG-----ACAGTGCA- 3' Chfr mmu-miR-335-5p beg:966 end:986 pic:3' TGTAAAAAGCAATA--ACGAGAACT 5'& .|||.| ||||||||| &5' --------TGTTGTCTTGCTCTTGA 3' Chfr mmu-miR-339-5p beg:776 end:797 pic:3' GCACTCGAGGACCTCCTGTCCCT 5'& .||||| ||||||| &5' ----GGCTCCAGACTGACAGGG- 3' Chfr mmu-miR-3470b beg:223 end:244 pic:3' GGTCGGACCAGATGTCTCACT 5'& |.||.| ||| || |||| || &5' CTAGTC-GGTGTA-AGAG-GA 3' Chfr mmu-miR-3475 beg:724 end:745 pic:3' AAGTTTGGTACAC-GGAGGTCT 5'& .|.|| | ||||||| &5' ---GAGCCCTTAGCCCTCCAG- 3' Chfr mmu-miR-3475 beg:770 end:788 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||| || ||||||| &5' ------CCAGATGGCTCCAGA 3' Chfr mmu-miR-3475 beg:758 end:778 pic:3' AAGTTTGGTAC-ACG--GAGGTCT 5'& || || || ||||||| &5' ------CCCTGCTGAAACTCCAGA 3' Chfr mmu-miR-34a beg:655 end:677 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||||. |. || |||||.| &5' -CAACT-GTCC-GAAACTGCTA 3' Chfr mmu-miR-361 beg:808 end:825 pic:3' CATGGGGACCTCTAAGACTATT 5'& .|||. ||||.|| &5' --GCCCTCA-----TCTGGTA- 3' Chfr mmu-miR-370 beg:699 end:726 pic:3' TGGTCCA--AGGTGGGG-TCGTCCG 5'& |||||| || |||| .|| ||| &5' -CCAGGTCCTCGACCCAGGGCTGGC 3' Chfr mmu-miR-376c beg:993 end:1014 pic:3' TGCACTTTAAAG---GAGATACAA 5'& ||.| ||||.|||| &5' ----GAGAGGCAGTACTCTGTGTT 3' Chfr mmu-miR-376cstar beg:685 end:705 pic:3' ATTTGTATCTTC----CTTATAGGTG 5'& .|||| ||.|.|||| &5' -------GGAAGTCTTGAGTGTCCA- 3' Chfr mmu-miR-381 beg:480 end:495 pic:3' TGTCTCTCGAACGG-GAACATAT 5'& ||| .||||||| &5' -----------GCCTTTTGTATA 3' Chfr mmu-miR-384-5p beg:418 end:439 pic:3' TGTAACGGATCCTTAA----CAAATGT 5'& ||||| ||||||| &5' ---------AGGAAGCATACGTTTACA 3' Chfr mmu-miR-432 beg:793 end:812 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |||. || .|||||| &5' --GCCTTTG---CT-TTCCAAG- 3' Chfr mmu-miR-455star beg:439 end:456 pic:3' GCTACATCAGGTTTCCGTGTAT 5'& ||||..||.||||| &5' --------TCCAGGGGTACATA 3' Chfr mmu-miR-455star beg:807 end:828 pic:3' GCTACATCAGGTTT---CCGTGTAT 5'& || || ||.|||| &5' ------AGCCCTCATCTGGTACAT- 3' Chfr mmu-miR-469 beg:981 end:1002 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& ||.|| ||| | .||||||| &5' -GATAC--AGA-CT----GAGAGGCA 3' Chfr mmu-miR-496 beg:991 end:1008 pic:3' CTCTAACCGGTACATTATGAGT 5'& |||| ||| |.||||| &5' GAGA--GGC-----AGTACTC- 3' Chfr mmu-miR-499 beg:684 end:698 pic:3' TTTGTAGTGACGTTCAGAATT 5'& | |||||||.| &5' ----------GGAAGTCTTGA 3' Chfr mmu-miR-501-5p beg:222 end:244 pic:3' AAAGTGGGTC--CCTG--TTTCCTAA 5'& .|.|| || |.||||| &5' -----TCTAGTCGGTGTAAGAGGAT- 3' Chfr mmu-miR-503star beg:985 end:1008 pic:3' GGTCCGTCAC-CTTTGTTATGAG 5'& ||| | || ||..||.||||| &5' -CAGAC--TGAGAGGCAGTACTC 3' Chfr mmu-miR-511 beg:26 end:45 pic:3' ACTCACGTCTCGT--TTTCCGTA 5'& ||||||| ..||||| &5' ------CAGAGCACAGGAGGCA- 3' Chfr mmu-miR-511 beg:981 end:1002 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| |||| .|.||||| &5' TGATA-CAGACTGAGAGGCA- 3' Chfr mmu-miR-542-5p beg:741 end:753 pic:3' AGCACTGTACTACTAGGGGCTC 5'& .||||.||| &5' -------------GTCCCTGAG 3' Chfr mmu-miR-592 beg:971 end:991 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& .|| |.|| ||||.|||. &5' --GTC-TTGCTC-TTGATACAG- 3' Chfr mmu-miR-592 beg:155 end:176 pic:3' TGTAGTAGC-GTATAACTGTGTTA 5'& .|.|||||| || ||||||| &5' GCGTCATCGTCAG--TGACACA-- 3' Chfr mmu-miR-668 beg:153 end:174 pic:3' CCATCACCCGGCT-CGGCTCACTGT 5'& | |.| |.| ||||||| &5' ------GCGTCATCGTC-AGTGACA 3' Chfr mmu-miR-668 beg:289 end:311 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& ||| ||.||| | ||||||| &5' ----GTGTGCTGAGGC-AGTGACA 3' Chfr mmu-miR-669g beg:296 end:316 pic:3' TAGTACAGTTGTGTA--TGTTACGT 5'& .| .|| |||.|||| &5' --------GAGGCAGTGACAGTGCA 3' Chfr mmu-miR-669g beg:20 end:49 pic:3' TAGTACAGT----TGTGTA---TGTTACGT 5'& || ||.| .|||| .|||||. &5' --CA-GTTACAGAGCACAGGAGGCAATGT- 3' Chfr mmu-miR-672 beg:212 end:226 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& ||||||.|||. &5' -----------ACACCAGCCTT- 3' Chfr mmu-miR-674star beg:1036 end:1057 pic:3' AACAAGACTCTACCCTCGACAC 5'& |||| |||||||| &5' ---TTCTAATAAATGAGCTGTG 3' Chfr mmu-miR-675-5p beg:105 end:131 pic:3' TGACACCCGGGAA-AGG-CGTGGT 5'& |||| |||..|| || ||||. &5' ACTGGGGGTTCTGGTCAGGCACT- 3' Chfr mmu-miR-676 beg:429 end:449 pic:3' TCGAGTTGTTGGA-GTCCTGCC 5'& |.|. |||.||| ||||. &5' -GTTT-ACAGCCTCCAGGG--- 3' Chfr mmu-miR-678 beg:735 end:754 pic:3' GGAGGTCAGGAACGTGGCTCTG 5'& |||||||||| |.|||| &5' CCTCCAGTCC-----CTGAGA- 3' Chfr mmu-miR-684 beg:354 end:375 pic:3' AACTGAACTTCCCTTTTGA 5'& || | || ||.||.|| &5' -TGGTTAAAATGGGAAGCT 3' Chfr mmu-miR-686 beg:23 end:47 pic:3' AGAAGTGGCAGAC--CCTTCGTTA 5'& |.|| |||.||||| &5' ---TTACAGAGCACAGGAGGCAAT 3' Chfr mmu-miR-691 beg:936 end:956 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |||.|||.|| ||||||| &5' -TTTTTGCTTC---TCAGGAA- 3' Chfr mmu-miR-694 beg:946 end:967 pic:3' GAAGTCCG--TTGTAAAAGTC 5'& ||||| || ||||||| &5' --TCAGGAAAAAAATTTTCA- 3' Chfr mmu-miR-696 beg:58 end:77 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||||.| ||| ||| .| &5' CCCATA-CAAACACTTG- 3' Chfr mmu-miR-698 beg:679 end:701 pic:3' TCCCTTCCTTT-GCTCTTAC 5'& |||||||||. | ||.|| &5' -GGGAAGGAAGTCTTGAGTG 3' Chfr mmu-miR-704 beg:614 end:636 pic:3' GATCC-TCGT-CTCGTGTACAGA 5'& || || |||||.||||.| &5' ---GGAAGAATGAGCATATGTTT 3' Chfr mmu-miR-705 beg:253 end:275 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |..| ||| ||||||||. &5' -GTTCTCCCTCCCTCCCACT 3' Chfr mmu-miR-706 beg:860 end:882 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& ||||| |||||.|. &5' --TTTTGTTTTTAGGTTTTTT- 3' Chfr mmu-miR-706 beg:36 end:54 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& |||.|| ||||.|. &5' ------GAGGCAATGTTTTTT- 3' Chfr mmu-miR-712 beg:669 end:690 pic:3' CCATGGCG----GGCCCACTTCCTC 5'& ||.|| || || |||||| &5' ---ACTGCTAATCCTGG-GAAGGA- 3' Chfr mmu-miR-717 beg:452 end:473 pic:3' TCTCTTCCA--TAGA-GACAGACTC 5'& ||| .||| |||||||. &5' -----AGGATAGTCTCCTGTCTGG- 3' Chfr mmu-miR-758 beg:14 end:33 pic:3' ATCACCTGGTCCAGTGTTT 5'& ||| || ||.|||.| &5' --GTGAAACA-GTTACAGA 3' Chfr mmu-miR-759 beg:999 end:1011 pic:3' CAGTTTTAACAAACGTGAGACG 5'& |.||||||. &5' -------------GTACTCTGT 3' Chfr mmu-miR-760 beg:704 end:723 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |||.| |||||||.||.| &5' TCCTC---GACCCAGGGCTG 3' Chfr mmu-miR-762 beg:204 end:226 pic:3' CGAGACAGGGCCGG---GGTCGGGG 5'& |||.|||| ||||||.. &5' ------TCCTGGCCACACCAGCCTT 3' Chfr mmu-miR-764-5p beg:613 end:630 pic:3' TCCTCCTGTACACTCGTGG 5'& ||| || ||||||. &5' -GGAAGAA---TGAGCAT- 3' Chfr mmu-miR-7a beg:78 end:99 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ..|| |.|| |||.|||| &5' --GGCATTTTTAC-AGTTTTCC- 3' Chfr mmu-miR-7b beg:77 end:99 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ..|| |.|| |||.|||| &5' --GGCATTTTTAC-AGTTTTCC- 3' Chfr mmu-miR-872 beg:780 end:801 pic:3' GGACTTGATTGTTCATTGGAA 5'& || .|||.|||.| .|||| &5' CCA-GACTGACAGG--GCCTT 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Chfr RAID00011240 mmu-miR-761 miRNA MIMAT0003893 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID00060755 mmu-miR-376b-3p miRNA MIMAT0001092 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00149089 mmu-miR-410-3p miRNA MIMAT0001091 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00179736 mmu-miR-449a-5p miRNA MIMAT0001542 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00186998 mmu-miR-7002-3p miRNA MIMAT0027907 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00232483 mmu-miR-3082-3p miRNA MIMAT0014873 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00306427 mmu-miR-365-3p miRNA MIMAT0000711 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID00325162 mmu-miR-137-3p miRNA MIMAT0000149 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00338752 mmu-miR-9-5p miRNA MIMAT0000142 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00386479 mmu-miR-15b-5p miRNA MIMAT0000124 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00417930 mmu-let-7g-5p miRNA MIMAT0000121 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00453169 mmu-miR-486a-5p miRNA MIMAT0003130 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00482676 mmu-miR-326-3p miRNA MIMAT0000559 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00541106 mmu-miR-665-5p miRNA MIMAT0017238 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00608614 mmu-miR-98-3p miRNA MIMAT0017023 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00615360 mmu-miR-5626-3p miRNA MIMAT0022382 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00617404 mmu-miR-330-5p miRNA MIMAT0004642 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00644919 mmu-miR-496a-3p miRNA MIMAT0003738 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00732433 mmu-miR-221-3p miRNA MIMAT0000669 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00734929 mmu-miR-29b-3p miRNA MIMAT0000127 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID00750969 mmu-miR-296-3p miRNA MIMAT0004576 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00751049 mmu-miR-339-5p miRNA MIMAT0000584 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID00767563 mmu-miR-30e-5p miRNA MIMAT0000248 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00784220 mmu-miR-1192 miRNA MIMAT0005850 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00800509 mmu-let-7f-5p miRNA MIMAT0000525 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00806163 mmu-miR-340-5p miRNA MIMAT0004651 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID00841120 mmu-miR-6926-5p miRNA MIMAT0027752 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00858864 mmu-miR-8118 miRNA MIMAT0031424 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00919608 mmu-miR-103-3p miRNA MIMAT0000546 Chfr mRNA 231600 CLIP-seq//Prediction 0.6308 Chfr RAID00988735 mmu-miR-125a-3p miRNA MIMAT0004528 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID00992950 mmu-miR-96-5p miRNA MIMAT0000541 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID00994406 mmu-miR-6402 miRNA MIMAT0025154 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01004854 mmu-miR-6951-3p miRNA MIMAT0027803 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01025006 mmu-miR-1264-3p miRNA MIMAT0014803 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01026371 mmu-miR-144-3p miRNA MIMAT0000156 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01034503 mmu-miR-485-5p miRNA MIMAT0003128 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01196177 mmu-let-7c-2-3p miRNA MIMAT0005439 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01254699 mmu-miR-135a-5p miRNA MIMAT0000147 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01309614 mmu-let-7c-5p miRNA MIMAT0000523 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01312053 mmu-miR-148a-3p miRNA MIMAT0000516 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01359001 mmu-miR-3105-5p miRNA MIMAT0014941 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01372142 mmu-miR-29c-3p miRNA MIMAT0000536 Chfr mRNA 231600 Prediction 0.2381 Chfr RAID01385727 mmu-miR-15a-5p miRNA MIMAT0000526 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01433521 mmu-miR-302b-3p miRNA MIMAT0003374 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01462535 mmu-miR-143-3p miRNA MIMAT0000247 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01495336 mmu-miR-421-3p miRNA MIMAT0004869 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01519016 mmu-miR-145a-5p miRNA MIMAT0000157 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01541512 mmu-miR-5104 miRNA MIMAT0020611 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01567870 mmu-miR-199a-5p miRNA MIMAT0000229 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01571903 mmu-miR-335-5p miRNA MIMAT0000766 Chfr mRNA 231600 Prediction 0.2381 Chfr RAID01583186 mmu-miR-495-3p miRNA MIMAT0003456 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01583246 mmu-miR-188-3p miRNA MIMAT0004541 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01624410 mmu-miR-7116-3p miRNA MIMAT0028130 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01632347 mmu-miR-125a-5p miRNA MIMAT0000135 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01657521 mmu-miR-195a-5p miRNA MIMAT0000225 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01688627 mmu-miR-23b-3p miRNA MIMAT0000125 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01783575 mmu-miR-34a-5p miRNA MIMAT0000542 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01826484 mmu-miR-26a-5p miRNA MIMAT0000533 Chfr mRNA 231600 Prediction 0.2381 Chfr RAID01833857 mmu-let-7a-5p miRNA MIMAT0000521 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01904778 mmu-miR-351-5p miRNA MIMAT0000609 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01952902 mmu-miR-669f-3p miRNA MIMAT0005839 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID01954743 mmu-miR-497a-5p miRNA MIMAT0003453 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02029490 mmu-miR-214-3p miRNA MIMAT0000661 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID02046852 mmu-miR-3071-5p miRNA MIMAT0014850 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02139439 mmu-miR-342-3p miRNA MIMAT0000590 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02154294 mmu-miR-222-3p miRNA MIMAT0000670 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID02166583 mmu-miR-1929-3p miRNA MIMAT0022729 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02197272 mmu-miR-302a-3p miRNA MIMAT0000380 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02205695 mmu-miR-107-3p miRNA MIMAT0000647 Chfr mRNA 231600 CLIP-seq//Prediction 0.6308 Chfr RAID02235948 mmu-let-7i-5p miRNA MIMAT0000122 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02271155 mmu-miR-3097-5p miRNA MIMAT0014915 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02304496 mmu-let-7f-1-3p miRNA MIMAT0004623 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02316680 mmu-miR-30c-5p miRNA MIMAT0000514 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02319561 mmu-let-7d-5p miRNA MIMAT0000383 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02336561 mmu-miR-21a-5p miRNA MIMAT0000530 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02340430 mmu-miR-292a-5p miRNA MIMAT0000369 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02407489 mmu-miR-494-3p miRNA MIMAT0003182 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID02480406 mmu-miR-139-5p miRNA MIMAT0000656 Chfr mRNA 231600 Prediction 0.2381 Chfr RAID02516947 mmu-miR-3618-5p miRNA MIMAT0035716 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02565064 mmu-miR-590-5p miRNA MIMAT0004895 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02602948 mmu-let-7b-3p miRNA MIMAT0004621 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02607392 mmu-miR-1912-5p miRNA MIMAT0014957 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02698596 mmu-miR-290a-5p miRNA MIMAT0000366 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02708480 mmu-miR-3569-3p miRNA MIMAT0029855 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02727658 mmu-miR-532-3p miRNA MIMAT0004781 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID02802071 mmu-miR-590-3p miRNA MIMAT0004896 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID02811785 mmu-miR-6997-3p miRNA MIMAT0027897 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02825584 mmu-miR-669b-3p miRNA MIMAT0017250 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02828087 mmu-miR-23a-3p miRNA MIMAT0000532 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02865399 mmu-miR-876-5p miRNA MIMAT0004854 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02890142 mmu-miR-6983-3p miRNA MIMAT0027869 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02928600 mmu-miR-694 miRNA MIMAT0003474 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID02984558 mmu-miR-7009-3p miRNA MIMAT0027923 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03047515 mmu-miR-218-5p miRNA MIMAT0000663 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03061673 mmu-miR-194-5p miRNA MIMAT0000224 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03106734 mmu-miR-30b-5p miRNA MIMAT0000130 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03123861 mmu-miR-324-5p miRNA MIMAT0000555 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03130496 mmu-let-7e-5p miRNA MIMAT0000524 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03149919 mmu-miR-467a-3p miRNA MIMAT0002108 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03179096 mmu-miR-449b miRNA MIMAT0005447 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03181545 mmu-let-7a-1-3p miRNA MIMAT0004620 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03216398 mmu-miR-138-5p miRNA MIMAT0000150 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03221427 mmu-miR-187-3p miRNA MIMAT0000216 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03260977 mmu-miR-211-5p miRNA MIMAT0000668 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03426095 mmu-miR-125b-5p miRNA MIMAT0000136 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03426222 mmu-miR-1839-5p miRNA MIMAT0009456 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03481543 mmu-miR-181b-1-3p miRNA MIMAT0017067 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03497760 mmu-miR-322-5p miRNA MIMAT0000548 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03544352 mmu-miR-466l-3p miRNA MIMAT0005830 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03581136 mmu-miR-26b-5p miRNA MIMAT0000534 Chfr mRNA 231600 Prediction 0.2455 Chfr RAID03581608 mmu-miR-148b-3p miRNA MIMAT0000580 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03614007 mmu-let-7b-5p miRNA MIMAT0000522 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03616889 mmu-miR-377-3p miRNA MIMAT0000741 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03649520 mmu-miR-29a-3p miRNA MIMAT0000535 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID03678594 mmu-miR-874-3p miRNA MIMAT0004853 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03713279 mmu-miR-181b-2-3p miRNA MIMAT0017084 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03729774 mmu-miR-384-5p miRNA MIMAT0004745 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID03764492 mmu-miR-16-5p miRNA MIMAT0000527 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03820396 mmu-miR-691 miRNA MIMAT0003470 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03823759 mmu-miR-582-5p miRNA MIMAT0005291 Chfr mRNA 231600 Prediction 0.2202 Chfr RAID03826158 mmu-miR-149-5p miRNA MIMAT0000159 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03910420 mmu-miR-98-5p miRNA MIMAT0000545 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03958839 mmu-miR-202-3p miRNA MIMAT0000235 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID03988650 mmu-miR-7119-3p miRNA MIMAT0028136 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID04020324 mmu-miR-135b-5p miRNA MIMAT0000612 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID04024568 mmu-miR-30a-5p miRNA MIMAT0000128 Chfr mRNA 231600 Prediction 0.1828 Chfr RAID04060991 mmu-miR-30d-5p miRNA MIMAT0000515 Chfr mRNA 231600 Prediction 0.1828