SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs6294871 | snp | A/G | 0.46875 | 0.121031 | intron-variant | Stc1 | Mm_Celera | 14:69035909 | CCTATTTTCCAGGCC[A/G]CTTGTGGACAAATGC | 20855 |
rs6296753 | snp | C/T | 0.473373 | 0.11227 | intron-variant | Stc1 | Mm_Celera | 14:69036287 | GCTAGATAGAATTGT[C/T]CCTGACAAGAGGGCT | 20855 |
rs6297274 | snp | A/C | 0.48 | 0.0979796 | intron-variant | Stc1 | Mm_Celera | 14:69036331 | TGGGCAAGGCAGAGG[A/C]TGTTCCCCTCTCTCC | 20855 |
rs30223584 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031858 | CACACCAAGTTTAGA[C/T]CAGGAATAAAGGGTT | 20855 |
rs30318400 | snp | A/C | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69037715 | CCTGTCTCGAAAAAA[A/C]AAAAAAAAAAAAAAA | 20855 |
rs30353239 | snp | A/G | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69037629 | AGGCAGAGGCAGGCG[A/G]ATTTCTGAGTTCGAG | 20855 |
rs30357424 | snp | C/T | 0.456747 | 0.140554 | synonymous-codon | Stc1 | Mm_Celera | 14:69038404 | CTTCAATAGGAGGCG[C/T]ACAAATGAGCCACAG | 20855 |
rs30390531 | snp | C/T | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69035211 | CCTGCAAGAAGTCCC[C/T]GAAACCCCAAAATAG | 20855 |
rs30400099 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Stc1 | Mm_Celera | 14:69037534 | AGGAAAGTAGCTTTC[A/G]CAAGAAAATGCATGG | 20855 |
rs30409276 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031790 | AAACATGCTCCAGAA[C/T]GCATGCGTGTGTGTA | 20855 |
rs30549452 | snp | G/T | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69030599 | AGGGGGGGCGGGGAA[G/T]CCTAACCTAACCAAA | 20855 |
rs30557772 | snp | C/T | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031320 | TCTCAGAAGGAAAAA[C/T]GTCCTTCCCCCAACC | 20855 |
rs30586202 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Stc1 | Mm_Celera | 14:69036661 | ACCATTGAGTCAAAA[C/T]AGGCCAGAAATTCCC | 20855 |
rs30694723 | snp | A/T | 0.336735 | 0.234472 | intron-variant | Stc1 | Mm_Celera | 14:69033248 | AGCCAAATCCTATGA[A/T]TGGATGAAATCCCAT | 20855 |
rs30781123 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69039489 | TGGGCCTATACTTGA[C/T]AGGAAAACCCAACAG | 20855 |
rs30839509 | snp | A/C | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69037721 | TCGAAAAAAAAAAAA[A/C]AAAAAAAAAAAACAA | 20855 |
rs30972265 | snp | C/T | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69037927 | TGAATAGAATAATGC[C/T]ATTAATTCGTTGTAT | 20855 |
rs31056965 | snp | G/T | 0.484429 | 0.0868505 | intron-variant | Stc1 | Mm_Celera | 14:69034075 | TCGTCTTCAACGTCA[G/T]AATCGCTCATGCAAC | 20855 |
rs31093608 | snp | A/G | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69037944 | TTAATTCGTTGTATG[A/G]CTTTGAGCAAGCACC | 20855 |
rs31105085 | snp | G/T | 0.484429 | 0.0868505 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031215 | ATTACAAGGTCTCTA[G/T]CCTTAATTCTCTAGC | 20855 |
rs31146957 | snp | C/T | 0.497778 | 0.0332592 | synonymous-codon | Stc1 | Mm_Celera | 14:69038287 | TGAAGACACGGTCAG[C/T]ACAATCAGAGACAGC | 20855 |
rs31239950 | snp | G/T | 0.387812 | 0.208586 | intron-variant | Stc1 | Mm_Celera | 14:69037848 | TAACTGTCAGTCCAT[G/T]TGCAGTGATGTAGTG | 20855 |
rs31266325 | snp | A/T | 0.48 | 0.0979796 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031665 | CTGGACCTTGCCTTT[A/T]GCTCCCACTGGCTGC | 20855 |
rs31328006 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031800 | CAGAACGCATGCGTG[C/T]GTGTATGCGCACAGA | 20855 |
rs31334863 | snp | A/C | 0.456747 | 0.140554 | intron-variant | Stc1 | Mm_Celera | 14:69035336 | GTAGCTAGTGTAACT[A/C]TATGTTCTTGGTACA | 20855 |
rs31342467 | snp | C/T | 0.375 | 0.216506 | intron-variant | Stc1 | Mm_Celera | 14:69037627 | GGAGGCAGAGGCAGG[C/T]GAATTTCTGAGTTCG | 20855 |
rs31350664 | snp | C/T | 0.375 | 0.216506 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69041018 | GCTTTGTCTCGTGTT[C/T]GCTGCAGAGCGATTC | 20855 |
rs31354019 | snp | C/T | 0.429688 | 0.173817 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69040727 | CCTAGTACAATTCTC[C/T]TAAGTTCAGTAAACT | 20855 |
rs31354892 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Stc1 | Mm_Celera | 14:69036593 | GTCTCTCCACATCAG[C/T]ACAGCAGGTCACTGT | 20855 |
rs31481335 | snp | A/G | 0.345679 | 0.230967 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69041038 | CAGAGCGATTCGGGG[A/G]CTGACCTAGACCTGT | 20855 |
rs31498451 | snp | C/T | 0.48 | 0.0979796 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031380 | TTGTATTTAATGGAA[C/T]CCCAAATCAAATTCC | 20855 |
rs31538044 | snp | C/T | 0.401235 | 0.199068 | intron-variant | Stc1 | Mm_Celera | 14:69033220 | GTTGTCAACAGCCTG[C/T]GGAGATGCTCGAAGC | 20855 |
rs36250973 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Stc1 | Mm_Celera | 14:69034403 | AGGTGCATGCAGGGA[A/G]AGAAGGTGGTTGGGA | 20855 |
rs36279673 | snp | A/C | 0.165289 | 0.235211 | utr-variant-3-prime | Stc1 | GRCm38.p3 | 14:69040020 | CGCTGGTGGTTTGAT[A/C]ATTTCTGCTGTGATG | 20855 |
rs36297709 | snp | C/T | 0.277778 | 0.248452 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69040865 | AACAATGCACATATC[C/T]ACACATATGAAAAGA | 20855 |
rs36382873 | snp | G/T | 0.132653 | 0.220748 | intron-variant | Stc1 | Mm_Celera | 14:69035840 | CAACCAGACAAGAGC[G/T]TCCAATTCTGCCAAA | 20855 |
rs36392634 | snp | A/T | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69028459 | ACGTGGCCAAGGTCA[A/T]AGATTTAATACCTAG | 20855 |
rs36412092 | snp | C/T | 0.336735 | 0.234472 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69038802 | ATCCCTATCTACTCT[C/T]CGCAAACACAAACCA | 20855 |
rs36413173 | snp | C/T | 0.391111 | 0.206368 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69032061 | AGTTGATGATGTCTC[C/T]CTCCTATCTCGTTTC | 20855 |
rs36432088 | snp | A/G | 0.35503 | 0.226867 | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69028583 | GCAGTAAGAATTCAG[A/G]GTGTCCACAGATCTC | 20855 |
rs36605767 | snp | A/G | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69032083 | TCTCGTTTCCTGTCC[A/G]TGGAGCTGAGTGTTC | 20855 |
rs36913876 | snp | A/C | 0.132653 | 0.220748 | intron-variant | Stc1 | Mm_Celera | 14:69034089 | ATAATCGCTCATGCA[A/C]CTCTTACCTTTTTCC | 20855 |
rs36988217 | snp | C/G | 0.459184 | 0.136902 | intron-variant | Stc1 | Mm_Celera | 14:69032840 | AGTCATCTTATTTAC[C/G]CAGAACCAGATTCAT | 20855 |
rs36997081 | snp | C/T | 0.391111 | 0.206368 | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69027595 | TGGCTCTGTTTCTTT[C/T]CAAGCCCATGCTGTC | 20855 |
rs37040493 | snp | A/G | 0.391111 | 0.206368 | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031126 | TGACCTTCAGTCACT[A/G]CCTACAGCCTACCCA | 20855 |
rs37128629 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Stc1 | Mm_Celera | 14:69036582 | CCTAGAAAAGGGTCT[C/T]TCCACATCAGCACAG | 20855 |
rs37413263 | snp | C/G | 0.132653 | 0.220748 | intron-variant | Stc1 | Mm_Celera | 14:69033059 | GTCATTGGTTTTGAA[C/G]CCTTTGCCAAATAGG | 20855 |
rs37569238 | snp | A/G | 0.197531 | 0.244432 | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69039631 | AACAAGAATCAAAAA[A/G]ACCATCCCTTTGGGC | 20855 |
rs37653205 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Stc1 | Mm_Celera | 14:69036109 | TGAAGGTATAGATGG[C/T]TAAAAGCTGTTGCGA | 20855 |
rs38037372 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Stc1 | Mm_Celera | 14:69033830 | CTATTTCAGTTCAAG[C/T]CTCATTCTCCCTTGT | 20855 |
rs38042097 | snp | C/T | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69028632 | CATACTGTAAGTGAA[C/T]GCGCAAATGCAAAAA | 20855 |
rs38841922 | snp | A/C | 0.408163 | 0.193609 | intron-variant | Stc1 | Mm_Celera | 14:69032682 | AGGTTTGGCTGAAAC[A/C]ATGACTGAGCAACAG | 20855 |
rs39014324 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Stc1 | Mm_Celera | 14:69038037 | CCAGGATTTCAGACA[C/T]AAGAGTCAGCTTCCT | 20855 |
rs45749483 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69035389 | GGCAATTGCTAAGTC[A/G]ACTTTTGCTGAAAGC | 20855 |
rs47344714 | snp | C/G | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69038734 | CATTCTGCCTCTCCT[C/G]AAGAGAGAATGTACC | 20855 |
rs47730579 | snp | A/G | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69038954 | TGTTAAATGGAATTC[A/G]TGTTATGAATCTGTG | 20855 |
rs48901436 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69032900 | GGGAGCCATTCTTGT[A/G]TTCCCTTCAAAGCAT | 20855 |
rs49881661 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69034927 | CTCCCCTTACAAGGC[A/G]GATTTCTTCTGCTGA | 20855 |
rs50790651 | snp | C/T | | | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69032108 | GTGTTCAAGATAGTC[C/T]AAGAGAGAAGAGATT | 20855 |
rs211824006 | in-del | -/C | | | intron-variant | Stc1 | Mm_Celera | 14:69033081 | CCAAATAGGAATGAA[-/C]CCCTGATATGTAAGA | 20855 |
rs212005445 | snp | A/G | | | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031916 | ATGATTAGCAGAAAA[A/G]CATTTTTGCTTTGAG | 20855 |
rs212019960 | snp | C/T | | | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031044 | ATACCATGCTTTTTA[C/T]TCTAGACTGCATTTT | 20855 |
rs212085378 | snp | C/T | | | intron-variant | Stc1 | Mm_Celera | 14:69034234 | CAACATAGACACACG[C/T]AAAGTCCCTGCCAGT | 20855 |
rs212443548 | snp | C/T | | | intron-variant | Stc1 | Mm_Celera | 14:69035291 | TTGTGTGTGCTCTCT[C/T]CTAAAAGAAAAGACA | 20855 |
rs213018731 | snp | A/G | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69038747 | CTCAAGAGAGAATGT[A/G]CCCTCTTCCATCCCC | 20855 |
rs213439430 | in-del | -/T | | | intron-variant, nc-transcript-variant | Stc1, LOC105245801 | Mm_Celera | 14:69030014 | TCTGAAAAAAAGAAA[-/T]TTTTTTTCAGGGCGC | 20855 |
rs213459395 | snp | A/G | | | utr-variant-5-prime, intron-variant | Stc1, LOC105245801 | GRCm38.p3 | 14:69029350 | GGAAAGGGGGGGAGG[A/G]AAAAAAAAAGCCAAC | 20855 |
rs214956255 | snp | C/T | | | intron-variant | Stc1 | Mm_Celera | 14:69037415 | CTTCAAGCACCCTTG[C/T]TTCCTTGTGTTTGCC | 20855 |
rs215084077 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69036123 | GCTAAAAGCTGTTGC[A/G]ACATCACAGTTTCGG | 20855 |
rs215447455 | snp | A/T | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69038708 | TCTTACCAACAGAAT[A/T]CATGTGTGGTCATTC | 20855 |
rs215460653 | snp | C/T | | | intron-variant | Stc1 | Mm_Celera | 14:69037377 | CACAGAAGGATGGTC[C/T]TTTAAAGGTCACTCA | 20855 |
rs215816435 | snp | A/G | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69039960 | AAAAAAAGAAAAAAA[A/G]AAAAAAAAAAGAAAA | 20855 |
rs216000260 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69035364 | ACAAAAGGGTGCTCA[A/G]TAAATATATGGCAAT | 20855 |
rs216263398 | snp | G/T | | | intron-variant | Stc1 | Mm_Celera | 14:69034484 | GGAAGGATTGATGAG[G/T]CAGGCAAGGCACCAT | 20855 |
rs216574284 | snp | A/T | | | intron-variant | Stc1 | Mm_Celera | 14:69034117 | TCCAAGTATTTTACC[A/T]CAGTGTTCAGGACTA | 20855 |
rs216692085 | in-del | -/G | | | intron-variant | Stc1 | Mm_Celera | 14:69035063 | ACTGACTGAAGGACA[-/G]AGGTTCAGTGGGATA | 20855 |
rs216961843 | in-del | -/GG | | | intron-variant | Stc1 | Mm_Celera | 14:69034745 | AAGCACATGGGGTGT[-/GG]GGGGGGTGGGGTCGA | 20855 |
rs217106422 | snp | A/G | | | intron-variant, nc-transcript-variant | Stc1, LOC105245801 | Mm_Celera | 14:69030245 | TGGTCCTGGCCTCCG[A/G]AGGCAAAGAAGCATT | 20855 |
rs217299917 | snp | A/T | | | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69027539 | CAGAATTATTTTTTT[A/T]AAGTTTTCATGCGAA | 20855 |
rs217321194 | snp | C/T | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69040982 | CCCTGCCCCTCTCCA[C/T]CTCCTTCTTGAACTT | 20855 |
rs217580674 | snp | G/T | | | intron-variant | Stc1 | Mm_Celera | 14:69033394 | CATCCTTCTGAGACA[G/T]ACAGCTGTCTTTACC | 20855 |
rs217654764 | in-del | -/ATA | | | cds-indel | Stc1 | Mm_Celera | 14:69041354 | TGAATTCCTTCTACG[-/ATA]ATAATAATAATAATA | 20855 |
rs218632833 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69035409 | TTGCTGAAAGCACAA[A/G]CCTCTTAAAGCATCT | 20855 |
rs219237321 | in-del | -/A | | | intron-variant, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69032480 | TCACAGCATGGGGGG[-/A]GGGGGTAGGGTGGGG | 20855 |
rs219296404 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69036494 | CTCATGTGCTCTGGG[A/G]GTTGAGTTAAAAATA | 20855 |
rs219385525 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69037886 | AAGCTTAGCGTCTAC[A/G]GCCCACCAATTCTAT | 20855 |
rs219643666 | snp | A/G | | | downstream-variant-500B | Stc1 | Mm_Celera | 14:69041601 | CACACACACACACAT[A/G]CAGACATGCATACAT | 20855 |
rs220217506 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69033437 | CTTCTGTGACATATA[A/G]GAGCCATTCTCAACT | 20855 |
rs220229266 | snp | A/C | | | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69027613 | AGCCCATGCTGTCCC[A/C]GTCCACAGAACAACC | 20855 |
rs220596980 | snp | C/T | | | synonymous-codon, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69031546 | CCTGCAGGTTGGCTG[C/T]GGGGCTTTTGCATGC | 20855 |
rs220738491 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69035671 | TACTAAGAGCAGGTA[A/G]GCCAACCTAAGAGTA | 20855 |
rs220841647 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69036275 | ATTTCACTCACAGCT[A/G]GATAGAATTGTCCCT | 20855 |
rs220871648 | snp | C/G | | | intron-variant | Stc1 | Mm_Celera | 14:69037959 | ACTTTGAGCAAGCAC[C/G]CCAGTTTCTTCCCTA | 20855 |
rs220895235 | in-del | -/A | | | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69028791 | CCTAGTGGCTCATTT[-/A]AAAAAAAAATTAAAG | 20855 |
rs220910134 | snp | C/G | | | missense, upstream-variant-2KB | Stc1, LOC105245801 | Mm_Celera | 14:69032379 | AGCTTAACGTTTGCA[C/G]CATCGCCAAGCGCAA | 20855 |
rs221002141 | in-del | -/TT | | | upstream-variant-2KB, intron-variant | Stc1, LOC105245801 | Mm_Celera | 14:69027357 | CTTTTTCTAACAATC[-/TT]TTTTTTTTTTAAGAA | 20855 |
rs221035956 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69036294 | AGAATTGTCCCTGAC[A/G]AGAGGGCTATAGCCA | 20855 |
rs221331927 | snp | C/T | | | utr-variant-3-prime | Stc1 | Mm_Celera | 14:69040158 | CTGCTCACCAAAGGT[C/T]AATGCTGAGAGAGGA | 20855 |
rs221539829 | snp | A/G | | | intron-variant | Stc1 | Mm_Celera | 14:69035741 | ACAACAGAAAAAGGA[A/G]ATGCCCTCAGAGTCA | 20855 |
rs221703763 | snp | A/C | | | intron-variant | Stc1 | Mm_Celera | 14:69033557 | CAACCTCAATTTTAA[A/C]AATTCTCCTAGGAAG | 20855 |