DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 56207 Uchl5 cguuccGUCACCGGACAUGUCa ::| |: ||||||| gauauuUGGACGUGUGUACAGu 2 17 5 26 [mm9:1:145653863-145653884:+] 0.5937 144 7 -14.63 -0.5933 MIMAT0004617 mmu-miR-148a* 56207 Uchl5 ucagccucacagagUCUUGAAa :|||||| accauuaaauaaaaGGAACUUu 2 9 50 71 [mm9:1:145653908-145653929:+] 0.6677 124 6 -7.09 -0.1867 MIMAT0004622 mmu-let-7c-1* 56207 Uchl5 ccUUUCGAUCUUCCAACAUGUc |||| ||| ||| ||| uaAAAG---GAACUUUGGACAa 2 21 59 77 [mm9:1:145653917-145653935:+] 0.6677 120 0 -5.50 -0.1251 MIMAT0001090 mmu-miR-409-3p 56207 Uchl5 uccCCAAGUGGCUCGUUGUAag || | ::|: |||||| aaaGGAACUUUGGACAACAUcu 3 20 61 82 [mm9:1:145653919-145653940:+] 0.6677 131 0 -12.49 -0.3301 MIMAT0003190 mmu-miR-291b-3p 56207 Uchl5 uguuUGUUUUAC-CUACGUGAAa ::| |:|| | ||||||| guguGUACAGUGUGCUGCACUUa 2 19 16 38 [mm9:1:145653874-145653896:+] 0.5747 153 7 -13.09 -0.7343 MIMAT0005448 mmu-miR-467b 56207 Uchl5 guAUAUGU-ACGU-CCGUGAAUg |:|||| ||:: ||||||| ugUGUACAGUGUGCUGCACUUAa 2 20 17 39 [mm9:1:145653875-145653897:+] 0.5747 157 7 -16.93 -0.8557 MIMAT0003508 mmu-miR-501-5p 56207 Uchl5 aaaGUGGGUCCCUG-UUUCCUaa |||| |: |||||| ggaCACCAUUAAAUAAAAGGAac 3 20 46 68 [mm9:1:145653904-145653926:+] 0.6339 122 0 -13.29 -0.2086 MIMAT0004862 mmu-miR-877* 56207 Uchl5 acccuccucccucuUCUCCUGu ||||||: --------------AGAGGAUa 2 9 1 8 [mm9:1:145653859-145653866:+] 0.6719 124 0 -10.83 -0.1041 MIMAT0005834 mmu-miR-466i 56207 Uchl5 auCACACAUACAC--ACACACAUa | | ||| || ||||||| -aGAGGAUAUUUGGACGUGUGUAc 2 21 1 23 [mm9:1:145653859-145653881:+] 0.5937 147 7 -11.03 -0.8473 MIMAT0007872 mmu-miR-1906 56207 Uchl5 ucgGGACGGA-GUCCGACGACGu | ||: | ||| |||||| ggaCGUGUGUACAGUGUGCUGCa 2 20 12 34 [mm9:1:145653870-145653892:+] 0.5747 126 6 -19.30 -0.1676 MIMAT0007876 mmu-miR-1907 56207 Uchl5 uggaggucuaggAGACGACGag | |||||| acguguguacagUGUGCUGCac 3 11 14 35 [mm9:1:145653872-145653893:+] 0.5747 122 0 -11.29 -0.1788 MIMAT0009407 mmu-miR-1942 56207 Uchl5 guuggucuaCUUCUGUAGAcu || |||||| ggaacuuugGACAACAUCUua 3 13 64 84 [mm9:1:145653922-145653942:+] 0.6677 124 0 -10.59 -0.2942 MIMAT0011216 mmu-miR-2140 56207 Uchl5 ugGUGGUUCUAGACGUGGa :|| : | ||||||: ugUACAGUGUGCUGCACUu 2 18 19 37 [mm9:1:145653877-145653895:+] 0.5747 129 0 -14.50 -0.1560 MIMAT0000124 mmu-miR-15b 56207 Uchl5 acauuugguacUACACGACGau :|||||||| acguguguacaGUGUGCUGCac 3 12 14 35 [mm9:1:145653872-145653893:+] 0.5747 131 0 -17.80 -0.1754 MIMAT0000141 mmu-miR-130a 56207 Uchl5 uacgggaaaauuguaACGUGAc |||||| guguguacagugugcUGCACUu 2 8 16 37 [mm9:1:145653874-145653895:+] 0.5747 120 6 -8.54 -0.1888 MIMAT0000153 mmu-miR-141 56207 Uchl5 ggUAGAAAUG---GUCUGUCACAau ||:| || :: ||||||| auAUUUGGACGUGUGUACAGUGUgc 3 21 6 30 [mm9:1:145653864-145653888:+] 0.6071 127 0 -12.95 -0.1048 MIMAT0000225 mmu-miR-195 56207 Uchl5 cgguuauaaagACACGACGau |||||||| cguguguacagUGUGCUGCac 3 11 15 35 [mm9:1:145653873-145653893:+] 0.5747 130 0 -12.68 -0.1771 MIMAT0000379 mmu-miR-301a 56207 Uchl5 cgAAAC-UGUUAUGAUAACGUGAc | || |||:|: |: |||||| cgUGUGUACAGUG-UGCUGCACUu 2 22 15 37 [mm9:1:145653873-145653895:+] 0.5747 130 6 -14.40 -0.1835 MIMAT0000387 mmu-miR-130b 56207 Uchl5 uacgggaaaguaguaACGUGAc |||||| guguguacagugugcUGCACUu 2 8 16 37 [mm9:1:145653874-145653895:+] 0.5747 120 6 -9.52 -0.1905 MIMAT0000526 mmu-miR-15a 56207 Uchl5 guguuugguaaUACACGACGau :|||||||| acguguguacaGUGUGCUGCac 3 12 14 35 [mm9:1:145653872-145653893:+] 0.5747 131 0 -16.05 -0.1771 MIMAT0000527 mmu-miR-16 56207 Uchl5 gcgguUAUAAAUG---CACGACGau :|:| ||| ||||||| uggacGUGUGUACAGUGUGCUGCac 3 18 11 35 [mm9:1:145653869-145653893:+] 0.5747 132 0 -16.58 -0.1771 MIMAT0000546 mmu-miR-103 56207 Uchl5 aguaucgggACAUGU--UACGACGa |||||| :|||||| uuggacgugUGUACAGUGUGCUGCa 2 15 10 34 [mm9:1:145653868-145653892:+] 0.5747 141 6 -18.97 -0.1676 MIMAT0000548 mmu-miR-322 56207 Uchl5 agguuuuguacUUA-ACGACGac |:| |||||| gacguguguacAGUGUGCUGCac 3 12 13 35 [mm9:1:145653871-145653893:+] 0.5747 122 0 -12.89 -0.1754 MIMAT0000647 mmu-miR-107 56207 Uchl5 acuaucgggACAUGU--UACGACGa |||||| :|||||| uuggacgugUGUACAGUGUGCUGCa 2 15 10 34 [mm9:1:145653868-145653892:+] 0.5747 141 6 -17.53 -0.1676 MIMAT0000747 mmu-miR-382 56207 Uchl5 gcUUAGGUGGUGCUUGUUGAAg || ||: :|:||||| | aaAAGGAACUUUGGACAACAUc 2 21 60 81 [mm9:1:145653918-145653939:+] 0.6677 124 0 -13.73 -0.1523 MIMAT0004186 mmu-miR-301b 56207 Uchl5 cgAAAC-UGUUAUGGUAACGUGAc | || |||:|: :: |||||| cgUGUGUACAGUG-UGCUGCACUu 2 22 15 37 [mm9:1:145653873-145653895:+] 0.5747 126 6 -13.31 -0.1835 MIMAT0003453 mmu-miR-497 56207 Uchl5 auguuugGUGUCACACGACGac :|||||||||||| acgugugUACAGUGUGCUGCac 3 16 14 35 [mm9:1:145653872-145653893:+] 0.5747 151 0 -24.92 -0.1771 MIMAT0003515 mmu-miR-721 56207 Uchl5 aagggggaaaauuaACGUGAc |||||| uguguacagugugcUGCACUu 2 8 17 37 [mm9:1:145653875-145653895:+] 0.5747 120 6 -6.47 -0.1888

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G061498 Uchl5 Mus musculus 56207

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Uchl5 mmu-let-7gstar beg:9 end:27 pic:3' CGTTCCGTCACCGGACATGTCA 5'& || |. |||||||| &5' ----GGAC---GTGTGTACAGT 3' Uchl5 mmu-miR-106bstar beg:13 end:30 pic:3' CGTCGTTCATGGGTGTCACGCC 5'& ||. .||||||.| &5' -------GTGTGTACAGTGTG- 3' Uchl5 mmu-miR-2140 beg:18 end:38 pic:3' TGGTGGTTCTAGACGTGGA 5'& .|| ||||||.| &5' --TACAGTGTGCTGCACTT 3' Uchl5 mmu-miR-291b-3p beg:19 end:38 pic:3' TGTTTGTTTTACCTACGTGAAA 5'& |||. .|| ||||||| &5' ----ACAGTGTGC-TGCACTT- 3' Uchl5 mmu-miR-302b beg:22 end:39 pic:3' GATGATTTTGTAC-CTTCGTGAAT 5'& .|| | ||||||| &5' ----------GTGTGCTGCACTTA 3' Uchl5 mmu-miR-467a beg:17 end:39 pic:3' GCGTATATGT---ACGTCCGTGAAT 5'& .|.|||| ||| ||||||| &5' ---GTGTACAGTGTGCT-GCACTTA 3' Uchl5 mmu-miR-467b beg:17 end:39 pic:3' GTATATGT---ACGTCCGTGAATG 5'& .|.|||| ||| ||||||| &5' -GTGTACAGTGTGCT-GCACTTA- 3' Uchl5 mmu-miR-497 beg:11 end:34 pic:3' ATGTTTG-GTGTCACACGACGAC 5'& ||. .|||||||||||| &5' -ACGTGTGTACAGTGTGCTGC-- 3' Uchl5 mmu-miR-654-5p beg:19 end:39 pic:3' TGTGT-ACAAGACGTCGAATGGT 5'& .||| ||| ||||| |||| &5' -TACAGTGTGCTGCA-CTTA--- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Uchl5 RAID00024760 mmu-miR-7225-3p miRNA MIMAT0028419 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00077858 mmu-miR-130b-3p miRNA MIMAT0000387 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00187743 mmu-miR-501-3p miRNA MIMAT0003509 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00321830 mmu-miR-674-5p miRNA MIMAT0003740 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00346134 mmu-miR-301b-3p miRNA MIMAT0004186 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00471445 mmu-miR-1199-5p miRNA MIMAT0005860 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00536119 mmu-miR-130a-3p miRNA MIMAT0000141 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00555802 mmu-miR-1258-3p miRNA MIMAT0029905 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00681350 mmu-miR-7214-5p miRNA MIMAT0028396 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00777096 mmu-miR-322-5p miRNA MIMAT0000548 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00813677 mmu-miR-466l-3p miRNA MIMAT0005830 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00847279 mmu-miR-551b-5p miRNA MIMAT0017236 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00886866 mmu-miR-301a-3p miRNA MIMAT0000379 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00909298 mmu-miR-5128 miRNA MIMAT0020639 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID00999260 mmu-miR-16-5p miRNA MIMAT0000527 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01035510 mmu-miR-3473d miRNA MIMAT0020632 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01090602 mmu-miR-582-5p miRNA MIMAT0005291 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01131414 mmu-miR-141-3p miRNA MIMAT0000153 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01179285 mmu-miR-378d miRNA MIMAT0025167 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01259028 mmu-miR-7119-3p miRNA MIMAT0028136 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01377871 mmu-miR-7061-3p miRNA MIMAT0028027 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01512521 mmu-miR-511-3p miRNA MIMAT0017281 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01581710 mmu-miR-382-5p miRNA MIMAT0000747 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01665757 mmu-miR-7679-5p miRNA MIMAT0029872 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01727663 mmu-miR-15b-5p miRNA MIMAT0000124 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01789241 mmu-miR-291b-3p miRNA MIMAT0003190 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01799075 mmu-miR-350-5p miRNA MIMAT0017040 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID01898307 mmu-miR-142a-5p miRNA MIMAT0000154 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02023321 mmu-miR-664-5p miRNA MIMAT0017353 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02096904 mmu-miR-6951-5p miRNA MIMAT0027802 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02137813 mmu-miR-340-5p miRNA MIMAT0004651 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02254961 mmu-miR-103-3p miRNA MIMAT0000546 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02300727 mmu-miR-1953 miRNA MIMAT0009424 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02501503 mmu-miR-713 miRNA MIMAT0003504 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02653584 mmu-miR-721 miRNA MIMAT0003515 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02722361 mmu-miR-15a-5p miRNA MIMAT0000526 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02774412 mmu-miR-338-5p miRNA MIMAT0004647 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02843318 mmu-miR-129-5p miRNA MIMAT0000209 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID02986626 mmu-miR-195a-5p miRNA MIMAT0000225 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03156635 mmu-miR-880-3p miRNA MIMAT0004844 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03164982 mmu-miR-6240 miRNA MIMAT0024861 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03300666 mmu-miR-497a-5p miRNA MIMAT0003453 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03355561 mmu-miR-7a-1-3p miRNA MIMAT0004670 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03509861 mmu-miR-330-3p miRNA MIMAT0000569 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03543910 mmu-miR-107-3p miRNA MIMAT0000647 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03593846 mmu-miR-135a-2-3p miRNA MIMAT0017064 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03645585 mmu-miR-3071-3p miRNA MIMAT0014851 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03705885 mmu-miR-1947-3p miRNA MIMAT0017343 Uchl5 mRNA 56207 Prediction 0.1828 Uchl5 RAID03722675 mmu-miR-467b-5p miRNA MIMAT0005448 Uchl5 mRNA 56207 Prediction 0.1828