DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Smurf2 | mmu-let-7d | 3 | 30 | UGAUACGU----------UGGAUGAUGGAGA- | ||| |||||| | |||| | ----GGCACCAAGGACUUACCUAC-AGCUCUU |
Smurf2 | mmu-miR-196b | 2 | 23 | GGUUGUUG-UCCUUUGAUGGAU- | ::|| |||| :|||||| | -GGGCACCAAGGAC-UUACCUAC |
Smurf2 | mmu-miR-199a | 57 | 83 | CUUGUCCAUCAGA--CUUGUGACCC- | |:||| || ||||:||||| | CAGCAGCGCUUCAGAGAACGCUGGGA |
Smurf2 | mmu-miR-199b | 57 | 83 | CUUGUCCAUCAGA--UUUGUGACCC- | |:||| || :|||:||||| | CAGCAGCGCUUCAGAGAACGCUGGGA |
Smurf2 | mmu-miR-291a-3p | 2 | 31 | -CCGUGUGUUUCACCU---------UCGUGAAA | ||||| ||| ||| ||| ||| | GGGCAC-CAA---GGACUUACCUACAGCUCUUA |
Smurf2 | mmu-miR-298 | 40 | 62 | -CCUUCUUGUCGGGAGGAGACGG | || |||||||: |:|| || | UGGCC-AACAGCCUCCUUCAGCA |
Smurf2 | mmu-miR-302 | 4 | 32 | AGUGGUUUUGUACCU---------UCGUGAAU- | |||||| ||| ||| |||| | GCACCAA-----GGACUUACCUACAGCUCUUAU |
Smurf2 | mmu-miR-324-3p | 55 | 89 | -GGUCGUCGUG-----------GACCCC--GUCACC | :|||||||:| ||||| ||| | UUCAGCAGCGCUUCAGAGAACGCUGGGAUACAGG-- |
Smurf2 | mmu-miR-324-5p | 41 | 66 | GUGGUUA-CGGGAUCCCCUA-CGC- | :|||| |||: ||| | GGCCAACAGCCUCCUUCAGCAGCGC |
Smurf2 | mmu-miR-338 | 55 | 83 | -AGUUGUUUU--AGUGACUA-CGACCU- | |||:||: ||| || |||||: | UUCAGCAGCGCUUCAGAGAACGCUGGGA |
Smurf2 | mmu-miR-351 | 59 | 84 | -GUC-CG-AGUUUCC--CGAGGAGUCCCU- | ||| || |||:|| ||| |||| | GCAGCGCUUCAGAGAACGCU-----GGGAU |
Smurf2 | mmu-miR-362 | 1 | 15 | AAGUGUGGAUCCAAGGUUCCUAA | |:|| ||||||| | --------UGGGCACCAAGGAC- |
Smurf2 | mmu-miR-370 | 40 | 67 | -UUGGUCCAAGGU-GGGGUCGUC-CG- | ::||| || |::|||||| || | UGGCCAACAGCCUCCUUCAGCAGCGCU |
Smurf2 | mmu-miR-485-5p | 29 | 55 | CUUAAGUAGU--GCCGG---UCGGAGA | |||:||: :|||| |||||| | -UAUUUAUUCCCUGGCCAACAGCCUCC |
Smurf2 | mmu-miR-486 | 50 | 91 | -GAGCCC--CGUCG---AGUC------------AUGUCCU | ||| ||||| |||| ||||||| | CCUCCUUCAGCAGCGCUUCAGAGAACGCUGGGAUACAGGAC |
Smurf2 | mmu-miR-488* | 40 | 61 | -CUGGUUCUUUGUCGGA--AAGUU- | |:||| ||||||| ||||: | UGGCCA----ACAGCCUCCUUCAGC |
Smurf2 | mmu-miR-665 | 40 | 57 | AUUCCCUGGA-GUCGGAGGACCA | |:|| ||||||||| | ----UGGCCAACAGCCUCCUU-- |
Smurf2 | mmu-miR-671 | 42 | 70 | -GGAGGUCGG-GGAGGUCC---CGAAGGA | || ||||| |||:||| ||||| | GCCAACAGCCUCCUUCAGCAGCGCUUCA- |
Smurf2 | mmu-miR-675-3p | 69 | 89 | UGACUCGCCAAUCCCGUAUGUC- | ||| ||| |||||| | --AGAGAACGCUGGG-AUACAGG |
Smurf2 | mmu-miR-676 | 47 | 82 | -UCG-----AGUUGU--UGGAGUC-CU----GCC- | ||| |||:|| :|:|||| || :|| | CAGCCUCCUUCAGCAGCGCUUCAGAGAACGCUGGG |
Smurf2 | mmu-miR-679 | 5 | 30 | -UGGUUCUC-AGUGGAGUGUC-AGG- | ||||||: |:|||| |||| ||: | CACCAAGGACUUACCU-ACAGCUCUU |
Smurf2 | mmu-miR-683 | 40 | 64 | CUCCUG-UGUCGAAU---GUCGUCC | || | ||||| |||||| | -UGGCCAACAGCCUCCUUCAGCAGC |
Smurf2 | mmu-miR-691 | 48 | 61 | AAAAGACGGAGAGAAGUCCUUA | ||||| |||||| | -----AGCCUC-CUUCAGC--- |
Smurf2 | mmu-miR-693-3p | 45 | 81 | AAUGUCGG------------UGUAGACUUU--CGACG | |||||| :| || ||:| |||| | -AACAGCCUCCUUCAGCAGCGCUUCAGAGAACGCUGG |
Smurf2 | mmu-miR-705 | 23 | 62 | ACGGGU--------GGGG--------UGGAGGG---UGG | ||:| |||: :|||||: :| | AGCUCUUAUUUAUUCCCUGGCCAACAGCCUCCUUCAGCA |
Smurf2 | mmu-miR-709 | 35 | 56 | -AGGAGGACGGAGA-CGGAGG- | ||| |: ||| |||||| | UUCC-CUGGCCAACAGCCUCCU |
Smurf2 | mmu-miR-762 | 23 | 55 | -CGAGAC------AGGG-CCGGG-GUCGGGG- | ||||| |||| |||| |||||:| | AGCUCUUAUUUAUUCCCUGGCCAACAGCCUCC |
Smurf2 | mmu-miR-764-3p | 41 | 57 | UGUCAACGGUGAUACCGGAGGA- | |||| ||||||| | -----GGCCAACA--GCCUCCUU |
Smurf2 | mmu-miR-770-3p | 21 | 49 | GGUCGAGGUGC----AGU--CCGGGUGC | ||||||: || |||| || | ACAGCUCUUAUUUAUUCCCUGGCCAACA |
Smurf2 | mmu-miR-93 | 48 | 69 | GAUGGACGUGCUUGUCGUGAAAC | :||| | |:||||:||| | -AGCCUCCUUCAGCAGCGCUUC- |
Smurf2 | mmu-miR-485-5p | 47 | 54 | CU----------------UAAGUAGU--GCCG---GUCGGAGA | |||:||: :||| ||||||| | GACUUACCUACAGCUCUUAUUUAUUCCCUGGCCAACAGCCUCC |
Smurf2 | mmu-let-7d | 6 | 28 | UGAUACGUUGGAU-GAUG--GAGA | || | | :||:|| |||| |||| | ACCAAG-GACTTACCTACAGCTCT |
Smurf2 | mmu-miR-196b | 4 | 21 | gGUUGUUGUCCUUUG-AUGGAU | || || ||| || |||||| | gCACCA--AGG--ACTTACCTA |
Smurf2 | mmu-miR-291a-3p | 3 | 30 | CCGUGUGUUUCACCU---------UCGUGAAa | ||||| ||| ||| ||| ||| | GGCAC-CAA---GGACTTACCTACAGCTCTTa |
Smurf2 | mmu-miR-324-3p | 43 | 65 | GGUCGUC-GUGGACCCCGUCACc | ||| ||| | ||| |||| | | CCAACAGCCTCCTTCAGCAGCGc |
Smurf2 | mmu-miR-324-5p | 57 | 86 | GUGGUUACGGGAUC--------CCCUACGc | || ||: ||:: || ||||| | | CAGCAGCGCTTCAGAGAACGCTGGGATACa |
Smurf2 | mmu-miR-338 | 56 | 81 | AGUUGUUUU--AGUGAC-UACGACCu | |||:||: : ||| | | ||||| | TCAGCAGCGCTTCAGAGAACGCTGGg |
Smurf2 | mmu-miR-351 | 47 | 73 | GUCCGAG---UUUCCCGAGGAGUCCCU | ||| ||| |: || |:|||| || | CAGCCTCCTTCAGCAGCGCTTCAGAGA |
Smurf2 | mmu-miR-362 | 1 | 15 | aaguguggAUCCAAGGUUCCUaa | |:|| ||||||| | --------TGGGCACCAAGGAct |
Smurf2 | mmu-miR-370 | 44 | 64 | uUGGUCCAAGGUGG-GGUCGUCcg | | ||| || || :|||||| | cAACAG---CCTCCTTCAGCAGcg |
Smurf2 | mmu-miR-485-5p | 28 | 54 | cuUAAGUA--GUGCCG---GUCGGAGa | |||:|| | :||| ||||||| | ttATTTATTCCCTGGCCAACAGCCTCc |
Smurf2 | mmu-miR-486 | 66 | 89 | gAGCCCCGU-CGAGUC-AUGUCCU | || | | | ||| :| ||||||| | tTCAGAGAACGCTGGGATACAGGA |
Smurf2 | mmu-miR-488* | 36 | 59 | cuGGUUC-UUUGUCGGA--AAGUu | || :| |||||||| |||| | tcCCTGGCCAACAGCCTCCTTCAg |
Smurf2 | mmu-miR-665 | 37 | 58 | auucCCUGGAGUCGGAGGAcca | || | ||||||||| | ccctGGCCAACAGCCTCCTtca |
Smurf2 | mmu-miR-671 | 43 | 70 | GGAGGUCGG-GGAGGUC--C-CGAAGga | || ||||| |||:||| | ||||| | CCAACAGCCTCCTTCAGCAGCGCTTCag |
Smurf2 | mmu-miR-675-3p | 67 | 87 | uGACUC--GCCAAUCCCGUAUGUC | | ||| || | || |||||| | tCAGAGAACGCT---GGGATACAG |
Smurf2 | mmu-miR-676 | 63 | 90 | uCG-AGU-UGUUG-GA------GUCCUGcc | || ||| | ||| || |||||| | cGCTTCAGAGAACGCTGGGATACAGGAC-- |
Smurf2 | mmu-miR-679 | 6 | 28 | UGGUU-CUCAGUGGAGUGUC-AGg | ||||| || |:||| :|||| || | ACCAAGGACTTACC-TACAGCTCt |
Smurf2 | mmu-miR-683 | 39 | 63 | cuCCUG-UGUC-GA--AUGUCGUCc | || | |||| || | |||||| | ctGGCCAACAGCCTCCTTCAGCAGc |
Smurf2 | mmu-miR-691 | 53 | 75 | aaAAGACGGAGAGAAGUC-CUUa | ||| || | |||||| ||| | ccTTCAGCAGCGCTTCAGAGAAc |
Smurf2 | mmu-miR-693-3p | 54 | 80 | aAUGUCG--GUGUAG--ACUUUCGACg | | |||| |:| || ||| |||| | cTTCAGCAGCGCTTCAGAGAACGCTGg |
Smurf2 | mmu-miR-705 | 40 | 58 | ACGGGUGGGGUGGAGGGUGg | || ||| | :|||||: | | TGGCCA-ACAGCCTCCTTCa |
Smurf2 | mmu-miR-709 | 36 | 54 | AGGAGGACGG-AGACGGAGG | ||| |: ||| | |||||| | TCC-CTGGCCAACAGCCTCC |
Smurf2 | mmu-miR-762 | 24 | 53 | CGAGA------CAGGG-CCGG-GGUCGGGG | ||||| |||| |||| |||||:| | GCTCTTATTTATTCCCTGGCCAACAGCCTC |
Smurf2 | mmu-miR-764-3p | 36 | 55 | ugucAACGGUGAUACCGGAGGA | | |||| | ||||||| | tcccTGGCCAACA--GCCTCCT |
Smurf2 | mmu-miR-93 | 47 | 69 | GAUGGACGUGCUUGUCGUGAAac | | :||| | : |:||||:||| | CAGCCTCCTTCAGCAGCGCTTca |