DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Pex12 ATTTA 251-1330 2181-2185;2456-2460;2640-2644;2682-2686

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT581946 mmu-miR-1912-3p Mus musculus Pex12 103737 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 103737 Pex12 aucucgucguUUAU-UACUAAGc |||| ||||||| caauuuuaacAAUACAUGAUUCu 2 13 859 881 [mm9:11:83108662-83108684:-] 0.5993 151 7 -8.20 -0.5908 MIMAT0004522 mmu-miR-27b* 103737 Pex12 caAGUGGUUAGUCGAUUCGAGa | |:|| |:| ||||||| uaUGAUCAUUUA--UAAGCUCu 2 21 1345 1364 [mm9:11:83108179-83108198:-] 0.4959 153 7 -13.75 -0.4129 MIMAT0003473 mmu-miR-133a* 103737 Pex12 uaaaccAAGGUAAAAUGGUCg || | ||||||| aaaauaUUGAAGCUUACCAGa 2 16 1315 1335 [mm9:11:83108208-83108228:-] 0.5129 143 7 -9.54 -0.7581 MIMAT0003473 mmu-miR-133a* 103737 Pex12 uaaACCAAGGUAAAAUGGUcg |||| | |||||| cucUGGUAAAAACUUACCAaa 3 19 1361 1381 [mm9:11:83108162-83108182:-] 0.4968 130 0 -8.62 -0.1112 MIMAT0004533 mmu-miR-141* 103737 Pex12 agguuguGACGUGACCUUCUAc :||: : ||||||| uaguugcUUGUUUAGGAAGAUu 2 16 1107 1128 [mm9:11:83108415-83108436:-] 0.4960 147 7 -12.13 -0.6465 MIMAT0004534 mmu-miR-145* 103737 Pex12 guUCUUGUCAUAAAG-GUCCUUa :|:|:| || || |||||| gaGGGAUAAAAUAUCACAGGAAa 2 21 391 413 [mm9:11:83109130-83109152:-] 0.5480 128 6 -15.45 -0.7259 MIMAT0004537 mmu-miR-154* 103737 Pex12 uuAUCCAGUUGGCACA-UACUAa | | || |: ||| ||||| aaUUGUUCCAUGCUGUCAUGAUu 2 21 889 911 [mm9:11:83108632-83108654:-] 0.5870 120 0 -9.16 -0.3277 MIMAT0004539 mmu-miR-183* 103737 Pex12 aauaccgggaagccaUUAAGUg |||||| cuuuuuaaaaagacaAAUUCAa 2 8 1009 1030 [mm9:11:83108513-83108534:-] 0.5052 120 6 -5.45 -0.1176 MIMAT0000217 mmu-miR-188-5p 103737 Pex12 gggaggugguacgUUCCCUAc :|||||| agagacugauuaaGAGGGAUa 2 9 378 398 [mm9:11:83109145-83109165:-] 0.5240 124 6 -10.31 -0.1228 MIMAT0000218 mmu-miR-24-1* 103737 Pex12 ugACUAUAGUC-GAGUCAU-CCGUg ||| | |:| :|:|||| |||| caUGAGA-CGGUUUUAGUAUGGCAg 2 22 48 71 [mm9:11:83109472-83109495:-] 0.5616 126 0 -18.08 -0.2491 MIMAT0004574 mmu-miR-294* 103737 Pex12 ucUAUCCCGGAGGUAAAACUCa ||:| | | |||||||| agAUGGAGGCAGGAUUUUGAGu 2 21 313 334 [mm9:11:83109209-83109230:-] 0.4997 156 7 -21.74 -0.1838 MIMAT0004579 mmu-miR-302a* 103737 Pex12 cgUUCAUGUUGGUGCAAAUUca || | : ||:| |||||| auAACUUUUACUAAGUUUAAaa 3 21 1269 1290 [mm9:11:83108253-83108274:-] 0.5527 140 0 -5.57 -0.1405 MIMAT0004626 mmu-miR-18a* 103737 Pex12 guCUUCCUCGUGA-AUCCCGUCa |||| : :| | ||||||| guGAAGAGUUAAUGAAGGGCAGa 2 21 737 759 [mm9:11:83108784-83108806:-] 0.5102 151 7 -18.61 -0.4522 MIMAT0004630 mmu-miR-26b* 103737 Pex12 cucGGUUCAUUACCUCUUGUcc :||| |||| |||||| aauUCAA-UAAU-UAGAACAaa 3 20 1024 1043 [mm9:11:83108500-83108519:-] 0.5052 135 0 -8.14 -0.1078 MIMAT0004630 mmu-miR-26b* 103737 Pex12 cuCGGUUC-AUUACCUC-UUGUCc | |||| |::|| || ||||| ugGACAAGCUGGUGAAGAAACAGc 2 21 1141 1164 [mm9:11:83108379-83108402:-] 0.5199 131 0 -15.64 -0.3824 MIMAT0004630 mmu-miR-26b* 103737 Pex12 cuCGGUUCAUUACCUCUU-GUCc |::||| | |||||| ||| ugGUUAAGCA--GGAGAAUCAGg 2 21 186 206 [mm9:11:83109337-83109357:-] 0.5961 125 0 -21.53 -0.5483 MIMAT0004631 mmu-miR-29a* 103737 Pex12 gacUUGUGGUUUUCUUU--AGUCa ||:|:|| |:|||| |||| uaaAAUAUCACAGGAAACCUCAGg 2 20 397 420 [mm9:11:83109123-83109146:-] 0.5480 123 0 -14.76 -0.5141 MIMAT0004638 mmu-miR-323-5p 103737 Pex12 cgcuugcgcggugcCUGGUGGa ||||||| ggugaguuauaaaaGACCACCu 2 9 236 257 [mm9:11:83109286-83109307:-] 0.5340 140 7 -19.91 -0.4520 MIMAT0000558 mmu-miR-325* 103737 Pex12 ugUGAAU-GACUCGUGGAU-GAUCc ::||| |||| ::|||| |||| auGUUUACCUGA-UGCCUACCUAGu 2 22 715 738 [mm9:11:83108805-83108828:-] 0.4933 130 0 -16.55 -0.2732 MIMAT0004640 mmu-miR-325 103737 Pex12 aacUAUCCUCCACGAGUUAUUu | | || :||||||| uuaAAAAGACAAAUUCAAUAAu 2 20 1013 1034 [mm9:11:83108509-83108530:-] 0.5052 143 7 -6.16 -1.0364 MIMAT0000569 mmu-miR-330* 103737 Pex12 agagacguccggGACACGAAAcg :| |||||| uaucuauuaaagUUUUGCUUUuu 3 12 992 1014 [mm9:11:83108529-83108551:-] 0.5052 123 0 -9.11 -0.1077 MIMAT0000586 mmu-miR-340-3p 103737 Pex12 cgAUAUUUCAUUGACUCUGCCu | |||:| | |||||||| acUCUAAGGCCA-UGAGACGGu 2 21 38 58 [mm9:11:83109485-83109505:-] 0.5616 158 7 -21.69 -0.4362 MIMAT0000650 mmu-miR-17* 103737 Pex12 gaUGUUCACGGGAG-UGA-CGUCa |::||| : ||| ||| |||| ucAUGAGUUUGCUCAACUGGCAGu 2 21 776 799 [mm9:11:83108744-83108767:-] 0.5609 127 0 -17.00 -0.5216 MIMAT0004666 mmu-miR-33* 103737 Pex12 cacuACGUGACA-CCUUUGUAAc | | || | | ||||||| ggccUUCUCUUUAGAAAACAUUa 2 19 454 476 [mm9:11:83109067-83109089:-] 0.5106 149 7 -4.82 -0.8214 MIMAT0004666 mmu-miR-33* 103737 Pex12 cacuacguGACACCUUUGUAAc || | |||||||| gaaaguuuCUAU-GAAACAUUu 2 15 834 854 [mm9:11:83108689-83108709:-] 0.6116 148 7 -6.95 -0.7559 MIMAT0000706 mmu-miR-362-5p 103737 Pex12 uaaguguggauccaaggUUCCUAa |||||| uacauggguuucuuuaaAAGGAUa 2 8 120 143 [mm9:11:83109400-83109423:-] 0.6168 120 6 -16.03 -0.1209 MIMAT0000745 mmu-miR-380-3p 103737 Pex12 uucuacACCUGGUA-UGAUGUAu || :||| ||||||| cuucccUGAUUCAUAACUACAUu 2 17 84 106 [mm9:11:83109437-83109459:-] 0.5738 151 7 -12.30 -0.9066 MIMAT0004704 mmu-miR-335-3p 103737 Pex12 ccaguccUCGUUAUUACUUUUu ||:| |||||||| aaauuucAGUAUGAAUGAAAAc 2 16 655 676 [mm9:11:83108867-83108888:-] 0.5713 155 7 -7.92 -0.4227 MIMAT0004704 mmu-miR-335-3p 103737 Pex12 ccaguccUCGUUAUUACUUUUu ||| | :||||||| uaaugcaAGCCA-GAUGAAAAu 2 16 1179 1199 [mm9:11:83108344-83108364:-] 0.5199 149 7 -8.03 -0.4735 MIMAT0004704 mmu-miR-335-3p 103737 Pex12 ccaguccucguuauUACUUUuu |||||| uuaugaaaguuucuAUGAAAca 3 9 830 851 [mm9:11:83108692-83108713:-] 0.6116 120 0 -4.28 -0.2370 MIMAT0003388 mmu-miR-376b* 103737 Pex12 auuGGUAUCUUCCU-UAUAGGUg |: || ||||| ||||||| uuuCUUUAAAAGGAUAUAUCCAu 2 20 128 150 [mm9:11:83109393-83109415:-] 0.6168 166 7 -15.89 -0.8869 MIMAT0001093 mmu-miR-411* 103737 Pex12 ccaaucaccuggCA-CAAUGUAu || ||||||| cauuaacuuuaaGUAGUUACAUg 2 11 103 125 [mm9:11:83109418-83109440:-] 0.6022 141 7 -10.39 -0.6630 MIMAT0004217 mmu-miR-465a-3p 103737 Pex12 agaugaaucuuuccGGGACUAg ||||||| caacagugauacuuCCCUGAUu 2 9 73 94 [mm9:11:83109449-83109470:-] 0.5599 140 7 -14.02 -0.9472 MIMAT0002107 mmu-miR-466a-3p 103737 Pex12 agAAUACACACGCA-CAUA-CAUAu ||: |||| || |||| |||| agUUGGAUGUG-GUAGUAUAGUAUc 2 22 279 302 [mm9:11:83109241-83109264:-] 0.4993 126 0 -12.63 -0.3482 MIMAT0002110 mmu-miR-469 103737 Pex12 ccuguggUUCUAGUUACUUUCUCCgu :||| ::|| |||||| aaagugaGAGACUGAU-UAAGAGGga 3 20 372 396 [mm9:11:83109147-83109171:-] 0.5240 133 0 -14.00 -0.1075 MIMAT0002889 mmu-miR-532-5p 103737 Pex12 ugcCAGGAUGUGAG-UUCC-GUAc ||:|||:|||| |||| ||| caaGUUCUAUACUCUAAGGCCAUg 2 20 28 51 [mm9:11:83109492-83109515:-] 0.5616 142 0 -27.45 -0.3766 MIMAT0003166 mmu-miR-546 103737 Pex12 cuGAGGCACGGUGGUa :|| ||||||| agUUCAAGGCCACCAu 2 15 332 347 [mm9:11:83109196-83109211:-] 0.5000 142 7 -17.53 -0.1412 MIMAT0003173 mmu-miR-547 103737 Pex12 gagugaGUUUCUACAUGGUUc :||| | |||||| cucuggUAAAAACUUACCAAa 2 16 1361 1381 [mm9:11:83108162-83108182:-] 0.4968 123 6 -8.99 -0.1216 MIMAT0005295 mmu-miR-376c* 103737 Pex12 auuuguAUCUUCCU-UAUAGGUg || ||||| ||||||| uuucuuUAAAAGGAUAUAUCCAu 2 17 128 150 [mm9:11:83109393-83109415:-] 0.6168 163 7 -15.33 -0.8869 MIMAT0005295 mmu-miR-376c* 103737 Pex12 auUUGUAUCUUCCUUAUAG-GUg || | :|| |||||| || uuAAGAGGGAUAAAAUAUCACAg 2 21 387 409 [mm9:11:83109134-83109156:-] 0.5480 120 0 -13.74 -0.5344 MIMAT0003186 mmu-miR-369-3p 103737 Pex12 uuucUAGU-UGGUACAUAAUAa |||| :|:| ||||||| augaAUCAUGCUAGGUAUUAUg 2 18 813 834 [mm9:11:83108709-83108730:-] 0.6116 160 7 -10.90 -0.5214 MIMAT0004788 mmu-miR-20b* 103737 Pex12 gaucuucACGAGUGUGA-CGUCa |||||| ||| |||| augaguuUGCUCA-ACUGGCAGu 2 16 778 799 [mm9:11:83108744-83108765:-] 0.6116 125 0 -18.97 -0.5940 MIMAT0003735 mmu-miR-672 103737 Pex12 agugUGUGUCAUGUGGUUG-GAGu ::|:||| |:|||| ||| gguaGUAUAGU--AUCAACACUCu 2 20 289 310 [mm9:11:83109233-83109254:-] 0.4993 120 0 -15.28 -0.1774 MIMAT0003897 mmu-miR-759 103737 Pex12 caGUUUUAACAAA--CGUGAGACg :|: || || | ||||||| ggUAGUAUAGUAUCAACACUCUGg 2 21 289 312 [mm9:11:83109231-83109254:-] 0.4993 147 7 -13.13 -0.4218 MIMAT0004827 mmu-miR-297b-3p 103737 Pex12 auACCCAUACACA-CAUA-CAUAu ||| |:|| || |||| |||| guUGGAUGUG-GUAGUAUAGUAUc 2 21 280 302 [mm9:11:83109241-83109263:-] 0.4993 129 0 -14.38 -0.3539 MIMAT0003493 mmu-miR-703 103737 Pex12 aagaaaggaagacUUCCAAAa ||||||| ucacuuaaagaguAAGGUUUu 2 9 257 277 [mm9:11:83109266-83109286:-] 0.4720 140 7 -8.34 -0.5683 MIMAT0003497 mmu-miR-707 103737 Pex12 gcauccguucgccGUACUGAc ||||||| cccuuccaucuauCAUGACUu 2 9 541 561 [mm9:11:83108982-83109002:-] 0.5438 140 7 -9.48 -0.9314 MIMAT0003508 mmu-miR-501-5p 103737 Pex12 aaagugggucccugUUUCCUAa ||||||| cauggguuucuuuaAAAGGAUa 2 9 122 143 [mm9:11:83109400-83109421:-] 0.6168 140 7 -10.58 -1.1708 MIMAT0004864 mmu-miR-297a* 103737 Pex12 auACCCAUACACA-CAUA-CAUAu ||| |:|| || |||| |||| guUGGAUGUG-GUAGUAUAGUAUc 2 21 280 302 [mm9:11:83109241-83109263:-] 0.4993 129 0 -14.38 -0.3539 MIMAT0004866 mmu-miR-297c* 103737 Pex12 auACCCAUACACA-CAUA-CAUAu ||| |:|| || |||| |||| guUGGAUGUG-GUAGUAUAGUAUc 2 21 280 302 [mm9:11:83109241-83109263:-] 0.4993 129 0 -14.38 -0.3539 MIMAT0004868 mmu-miR-343 103737 Pex12 agaCCCGUGUACUUCCC-UCu | |: |||||||| || gaaGAGUUAAUGAAGGGCAGa 2 18 739 759 [mm9:11:83108784-83108804:-] 0.5102 121 0 -16.44 -0.2640 MIMAT0004872 mmu-miR-465b-3p 103737 Pex12 agaugaaucuuuccGGGACUAg ||||||| caacagugauacuuCCCUGAUu 2 9 73 94 [mm9:11:83109449-83109470:-] 0.5599 140 7 -14.02 -0.9472 MIMAT0004874 mmu-miR-465c-3p 103737 Pex12 agaugaaucuuuccGGGACUAg ||||||| caacagugauacuuCCCUGAUu 2 9 73 94 [mm9:11:83109449-83109470:-] 0.5599 140 7 -14.02 -0.9472 MIMAT0004876 mmu-miR-466b-3p 103737 Pex12 agAAUACACACGCA-CAUA-CAUAu ||: |||| || |||| |||| agUUGGAUGUG-GUAGUAUAGUAUc 2 22 279 302 [mm9:11:83109241-83109264:-] 0.4993 126 0 -12.63 -0.3482 MIMAT0005453 mmu-miR-466b-3-3p 103737 Pex12 agAAUACACACGCA-CAUA-CAUAa ||: |||| || |||| |||| agUUGGAUGUG-GUAGUAUAGUAUc 2 22 279 302 [mm9:11:83109241-83109264:-] 0.4993 126 0 -12.89 -0.3482 MIMAT0004878 mmu-miR-466c-3p 103737 Pex12 agAAUACACACGCA-CAUA-CAUAu ||: |||| || |||| |||| agUUGGAUGUG-GUAGUAUAGUAUc 2 22 279 302 [mm9:11:83109241-83109264:-] 0.4993 126 0 -12.63 -0.3482 MIMAT0004880 mmu-miR-466e-3p 103737 Pex12 agAAUACACACGCA-CAUA-CAUAu ||: |||| || |||| |||| agUUGGAUGUG-GUAGUAUAGUAUc 2 22 279 302 [mm9:11:83109241-83109264:-] 0.4993 126 0 -12.63 -0.3482 MIMAT0004891 mmu-miR-509-3p 103737 Pex12 gguaaUGUCUUUACAGUUAGu ||| | ||||||: augaaACAUUUAAGUCAAUUu 2 17 844 864 [mm9:11:83108679-83108699:-] 0.6116 132 0 -8.01 -0.1252 MIMAT0004897 mmu-miR-654-5p 103737 Pex12 ugUGUACAAGACGUCGAAUGGu | | | :|| |||||||| uuAAAAAUAUUGAAGCUUACCa 2 21 1312 1333 [mm9:11:83108210-83108231:-] 0.5129 156 7 -16.93 -1.1705 MIMAT0004897 mmu-miR-654-5p 103737 Pex12 uguguacaagacgucGAAUGGu |||||| uaccaaaauaaagauCUUACCc 2 8 1375 1396 [mm9:11:83108147-83108168:-] 0.4977 120 6 -7.18 -0.1119 MIMAT0004898 mmu-miR-654-3p 103737 Pex12 uuccacuaccAGUCGUCUGUAu |:| ||||||| auuagaggcuUUAUCAGACAUg 2 13 484 505 [mm9:11:83109038-83109059:-] 0.5968 148 7 -14.12 -0.8189 MIMAT0004931 mmu-miR-466d-3p 103737 Pex12 gauacACACGCA-CAUA-CAUAu |||| || |||| |||| uuggaUGUG-GUAGUAUAGUAUc 2 17 281 302 [mm9:11:83109241-83109262:-] 0.4993 121 0 -11.97 -0.3482 MIMAT0004933 mmu-miR-878-3p 103737 Pex12 agaugggucacACCACAGUACg || ||||||| gaauuguuccaUGCUGUCAUGa 2 12 888 909 [mm9:11:83108634-83108655:-] 0.5870 147 7 -15.23 -0.5658 MIMAT0005835 mmu-miR-1-2-as 103737 Pex12 acCUUACAUUUCUUCAUA-CAu |:|||| :| ||||| || uuGGAUGU--GGUAGUAUAGUa 2 20 281 300 [mm9:11:83109243-83109262:-] 0.4993 120 0 -15.12 -0.6874 MIMAT0005846 mmu-miR-467f 103737 Pex12 acaUCCACACACA-CA-CAUAUa || || ||| || ||||| uuaAGUUGGAUGUGGUAGUAUAg 2 19 276 298 [mm9:11:83109245-83109267:-] 0.4857 121 0 -12.73 -0.3896 MIMAT0005854 mmu-miR-467g 103737 Pex12 uauaUACACACA-CAUA-CAUAu ||||| || |||| |||| uuggAUGUG-GUAGUAUAGUAUc 2 18 281 302 [mm9:11:83109241-83109262:-] 0.4993 126 0 -12.80 -0.3454 MIMAT0005857 mmu-miR-1196 103737 Pex12 uccgucuccgucCAUCUAAa ||||||| auaagccaucuuGUAGAUUu 2 9 1294 1313 [mm9:11:83108230-83108249:-] 0.5413 140 7 -9.08 -1.0358 MIMAT0007868 mmu-miR-1903 103737 Pex12 acagaguccuucuUCUUCUUCc |||||||| auugaagcuuaccAGAAGAAGa 2 10 1320 1341 [mm9:11:83108202-83108223:-] 0.5129 145 7 -14.45 -0.9344 MIMAT0007876 mmu-miR-1907 103737 Pex12 uggagGUCU--AGGAGACG-ACGAg |||| |:||||| |||| aagggCAGAAGCCUUCUGCUUGCUc 2 18 751 775 [mm9:11:83108768-83108792:-] 0.5102 124 0 -24.64 -0.1886 MIMAT0009393 mmu-miR-1930 103737 Pex12 ugcgacguccaugaUACCUCCa ||||||| ucaacacucuggagAUGGAGGc 2 9 301 322 [mm9:11:83109221-83109242:-] 0.4993 140 7 -17.70 -0.1045 MIMAT0009396 mmu-miR-1933-5p 103737 Pex12 uuugauucuGGCUUGUGGU-ACUGa | || ||||| |||| auuuccguuCAGAUCACCAUUGACu 2 16 951 975 [mm9:11:83108568-83108592:-] 0.5302 123 0 -18.01 -0.5628 MIMAT0009409 mmu-miR-1944 103737 Pex12 uuagUCUUGAACUGUA-AGUCGUGUCUc | | | || : | ||||||||| acaaAAAUCCUGUUCUAACAGCACAGAu 2 24 1039 1066 [mm9:11:83108477-83108504:-] 0.5052 154 7 -16.39 -0.5310 MIMAT0009417 mmu-miR-1950 103737 Pex12 acugGUAUAGGAAUCUACGUCu || || | |||||||| caggCA-AUGGUGAGAUGCAGu 2 19 680 700 [mm9:11:83108843-83108863:-] 0.6130 152 7 -17.61 -0.9542 MIMAT0009442 mmu-miR-1969 103737 Pex12 uggguacaaUUUCAG---AGGUAGAa |||| | ||||||| cuuuagagaAAAGCCCCUUCCAUCUa 2 15 527 552 [mm9:11:83108991-83109016:-] 0.5438 145 7 -13.15 -0.8648 MIMAT0009460 mmu-miR-1982.1 103737 Pex12 gaCACCCUC--UUGUAUC-CCACUCu ||| ||| ||::|:| |||||| guGUGAGAGCCAAUGUGGAGGUGAGu 2 22 217 242 [mm9:11:83109301-83109326:-] 0.5961 136 6 -24.09 -0.4102 MIMAT0015640 mmu-miR-3470a 103737 Pex12 ggUCGGACCAGAUGUU-UCACu ||: ||| |||| |||| uuAGUAUGGCAGACAACAGUGa 2 20 60 81 [mm9:11:83109462-83109483:-] 0.5599 123 0 -16.67 -0.6446 MIMAT0000125 mmu-miR-23b 103737 Pex12 ccaUUAGGGACCGUUA-CACUa | | | |||||| |||| aaaACUAGCAGGCAAUGGUGAg 2 19 672 693 [mm9:11:83108850-83108871:-] 0.5922 122 0 -14.08 -0.5659 MIMAT0000126 mmu-miR-27b 103737 Pex12 cgucuugaAUCGGUGACACUu |: |:||||||| uuuccaagUGCCUACUGUGAu 2 14 1202 1222 [mm9:11:83108321-83108341:-] 0.4710 149 7 -14.39 -0.2653 MIMAT0000128 mmu-miR-30a 103737 Pex12 gaaggucagcuccUACAAAUGu |||||||| aaauccuuaucuaAUGUUUACc 2 10 702 723 [mm9:11:83108820-83108841:-] 0.5447 145 7 -9.89 -0.7312 MIMAT0000130 mmu-miR-30b 103737 Pex12 ucGACUCACAUCCUACAAAUGu || | | || |||||||| ucCUUA-UCUA--AUGUUUACc 2 21 705 723 [mm9:11:83108820-83108838:-] 0.5447 147 7 -6.97 -0.7312 MIMAT0000147 mmu-miR-135a 103737 Pex12 aguguauccUUAUUU-UUCGGUAu ||||:| ||||||| uaaguuuaaAAUAGAUAAGCCAUc 2 15 1280 1303 [mm9:11:83108240-83108263:-] 0.5527 157 7 -11.36 -0.9395 MIMAT0000156 mmu-miR-144 103737 Pex12 ucaugUAGUAGAUAUG-ACAu || ||| |||| ||| ccuugAUGAUCCAUACUUGUc 2 16 600 620 [mm9:11:83108923-83108943:-] 0.5495 123 0 -7.78 -0.3703 MIMAT0000211 mmu-miR-182 103737 Pex12 gcCACACUCAAGAUGGUAACGGUUu || ||| | || ||||||: uuGUAUGAAAU-AACAUUUGCCAGa 2 24 1073 1096 [mm9:11:83108447-83108470:-] 0.5052 137 0 -12.86 -0.1125 MIMAT0000221 mmu-miR-191 103737 Pex12 gucgacgaaaacccuAAGGCAAc ||||||| gggguuuaaauaaauUUCCGUUc 2 9 938 960 [mm9:11:83108583-83108605:-] 0.5688 140 7 -12.04 -0.9600 MIMAT0000238 mmu-miR-205 103737 Pex12 gucugaggccaccUUACUUCCu |||||||| cuagugaagaguuAAUGAAGGg 2 10 734 755 [mm9:11:83108788-83108809:-] 0.5102 145 7 -13.07 -0.1632 MIMAT0000248 mmu-miR-30e 103737 Pex12 gaaggucaguuccUACAAAUGu |||||||| aaauccuuaucuaAUGUUUACc 2 10 702 723 [mm9:11:83108820-83108841:-] 0.5447 145 7 -10.62 -0.7312 MIMAT0000514 mmu-miR-30c 103737 Pex12 cgacucucacauccUACAAAUGu |||||||| aaaauccuuaucuaAUGUUUACc 2 10 701 723 [mm9:11:83108820-83108842:-] 0.5447 145 7 -6.97 -0.7312 MIMAT0000515 mmu-miR-30d 103737 Pex12 gaaggucagccccUACAAAUGu |||||||| aaauccuuaucuaAUGUUUACc 2 10 702 723 [mm9:11:83108820-83108841:-] 0.5447 145 7 -9.89 -0.7349 MIMAT0000530 mmu-miR-21 103737 Pex12 aguugUAGUCAGACUAUUCGAu |||| |:| ||||||| auaugAUCA-UUU-AUAAGCUc 2 18 1344 1363 [mm9:11:83108180-83108199:-] 0.4959 153 7 -9.90 -0.3324 MIMAT0000530 mmu-miR-21 103737 Pex12 agUUGUAGUCAGACUAUUCGau |:: | | : ||||||| uaAGUUUAAAAUAGAUAAGCca 3 21 1280 1301 [mm9:11:83108242-83108263:-] 0.5527 128 0 -9.33 -0.1167 MIMAT0000532 mmu-miR-23a 103737 Pex12 ccUUUAGGGACCGUUA-CACUa || | | |||||| |||| aaAACUAGCAGGCAAUGGUGAg 2 20 672 693 [mm9:11:83108850-83108871:-] 0.5922 127 0 -14.23 -0.5659 MIMAT0000537 mmu-miR-27a 103737 Pex12 cgccuugaAUCGGUGACACUu |: |:||||||| uuuccaagUGCCUACUGUGAu 2 14 1202 1222 [mm9:11:83108321-83108341:-] 0.4710 149 7 -14.39 -0.2653 MIMAT0000582 mmu-miR-338-3p 103737 Pex12 guuguuuUAGUGACUACGACCu :| |:| ||||||| gccuacuGUGAUUCAUGCUGGc 2 16 1211 1232 [mm9:11:83108311-83108332:-] 0.5118 151 7 -14.20 -0.1225 MIMAT0004651 mmu-miR-340-5p 103737 Pex12 uuaGUCAGAGUAACGAAAUAUu ::| ||: | ||||||| acaUGGACUU-UCUCUUUAUAg 2 20 501 521 [mm9:11:83109022-83109042:-] 0.5703 145 7 -8.15 -0.6590 MIMAT0000590 mmu-miR-342-3p 103737 Pex12 ugcccacgCUAA-AG--A-CACACUCu |||| || | ||||||| agaaucagGAUUAUCGGUGGUGUGAGa 2 16 198 224 [mm9:11:83109319-83109345:-] 0.5961 144 7 -19.32 -0.4267 MIMAT0000597 mmu-miR-346 103737 Pex12 ucUCCGUC--CGUGAGCCCGUCUGu || |:| :| | ||||||| ugAGACGGUUUUAGUAUGGCAGACa 2 22 50 74 [mm9:11:83109469-83109493:-] 0.5599 144 7 -21.27 -0.9889 MIMAT0000612 mmu-miR-135b 103737 Pex12 aguguauccUUA-CUUUUCGGUAu ||| || ||||||| uaaguuuaaAAUAGAUAAGCCAUc 2 15 1280 1303 [mm9:11:83108240-83108263:-] 0.5527 153 7 -10.30 -0.9395 MIMAT0000648 mmu-miR-10a 103737 Pex12 guGUUUAAG--CCUAGAUGU-CCCAu :|| ||: | | :|||| |||| auUAACUUUAAGUAGUUACAUGGGUu 2 22 104 129 [mm9:11:83109414-83109439:-] 0.6022 120 0 -11.81 -0.8918 MIMAT0000662 mmu-miR-216a 103737 Pex12 agUGUC-AACGGUCG---AC-UCUAAu |||| || :|||| || ||||| ccACAGUUUAUCAGCAUUUGAAGAUUu 2 21 573 599 [mm9:11:83108944-83108970:-] 0.5379 126 0 -20.26 -0.4474 MIMAT0000662 mmu-miR-216a 103737 Pex12 agUGUCAA--CGGUCG-AC-UCUAAu |:|| | |||| | || ||||| aaAUAGAUAAGCCAUCUUGUAGAUUu 2 21 1288 1313 [mm9:11:83108230-83108255:-] 0.5413 122 0 -13.15 -1.0195 MIMAT0000679 mmu-miR-217 103737 Pex12 agGUCAGUCA-AGGACUACGUCAu ||| || | : |||||||| agCAGGCAAUGGUGAGAUGCAGUa 2 22 678 701 [mm9:11:83108842-83108865:-] 0.6130 152 7 -18.88 -0.9116 MIMAT0000739 mmu-miR-375 103737 Pex12 agugcgcucggcuugCUUGUUu |||||| caaauucaauaauuaGAACAAa 2 8 1022 1043 [mm9:11:83108500-83108521:-] 0.5052 120 6 -7.87 -0.1418 MIMAT0000746 mmu-miR-381 103737 Pex12 ugUC-UCUCGAACG-GGAACAUAu || | || | | |||||||| acAGCACAGAUACCACCUUGUAUg 2 21 1056 1079 [mm9:11:83108464-83108487:-] 0.5052 150 7 -17.23 -0.3256 MIMAT0000746 mmu-miR-381 103737 Pex12 ugUCUCUCGA-ACGG--GAACAUau | | || | ||| |||||| uaAAAUAGAUAAGCCAUCUUGUAga 3 21 1286 1310 [mm9:11:83108233-83108257:-] 0.5527 126 0 -13.88 -0.1442 MIMAT0004745 mmu-miR-384-5p 103737 Pex12 ugUAACGGAUCCUUAACAAAUGu | | |:|| | ||||||| aaAAUCCUUAUCUAAUGUUUACc 2 22 701 723 [mm9:11:83108820-83108842:-] 0.5447 153 7 -9.18 -0.7312 MIMAT0001092 mmu-miR-376b 103737 Pex12 uucACCUACAAGGAGAUACUa || | ||| ||||||| uuaUGAAAGUU--UCUAUGAa 2 19 830 848 [mm9:11:83108695-83108713:-] 0.6116 151 7 -10.78 -1.2093 MIMAT0001420 mmu-miR-433 103737 Pex12 uguggcuccucGGGUAGUACUa :|:||||||| agccccuuccaUCUAUCAUGAc 2 12 538 559 [mm9:11:83108984-83109005:-] 0.5438 147 7 -14.09 -0.6689 MIMAT0003183 mmu-miR-376c 103737 Pex12 ugcACUUUAAAGGAGAUACaa ||||| || |||||| uuaUGAAAGUU--UCUAUGaa 3 19 830 848 [mm9:11:83108695-83108713:-] 0.6116 139 0 -13.39 -0.1238 MIMAT0003183 mmu-miR-376c 103737 Pex12 ugCACUUUA-AAGGAGA-UACAa || |||| |: ||| |||| caGUAAAAUCCUUAUCUAAUGUu 2 20 697 719 [mm9:11:83108824-83108846:-] 0.5447 122 0 -7.29 -0.6710 MIMAT0003456 mmu-miR-495 103737 Pex12 uucuucaCGUGGUACAAACAAa | |: : ||||||| ugucuugGGAUAGGGUUUGUUu 2 16 617 638 [mm9:11:83108905-83108926:-] 0.5691 143 7 -9.46 -0.2793 MIMAT0004895 mmu-miR-590-5p 103737 Pex12 gacGUGAAAAUACUUAUUCGAg :|: | || ||||||| guaUAUGAUCAUUUAUAAGCUc 2 20 1342 1363 [mm9:11:83108180-83108201:-] 0.4959 147 7 -12.25 -0.3656 MIMAT0004895 mmu-miR-590-5p 103737 Pex12 gacgUGAAA--AUACUUAUUCGag | ||| || :|||||| acuaAGUUUAAAAUAGAUAAGCca 3 19 1278 1301 [mm9:11:83108242-83108265:-] 0.5527 129 0 -8.89 -0.1155 MIMAT0005850 mmu-miR-1192 103737 Pex12 uuaAACCAGACAAACAAACAAa |||| | ||||||| gucUUGGGAU-AGGGUUUGUUu 2 20 618 638 [mm9:11:83108905-83108925:-] 0.5691 141 7 -12.12 -0.2769

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G069455 Pex12 Mus musculus 103737

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Pex12 mmu-miR-135a beg:1286 end:1303 pic:3' AGTGTATCCTTATTT-TTCGGTAT 5'& ||||.| ||||||| &5' ---------AATAGATAAGCCAT- 3' Pex12 mmu-miR-135b beg:1290 end:1303 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& || ||||||| &5' ------------GATAAGCCAT- 3' Pex12 mmu-miR-380-3p beg:87 end:106 pic:3' TTCTACACCTGGTA-TGATGTAT 5'& || .||| ||||||| &5' ------TGATTCATAACTACAT- 3' Pex12 mmu-miR-27a beg:1208 end:1222 pic:3' CGCCTTGAATCGG-TGACACTT 5'& ||| ||||||| &5' ----------GCCTACTGTGA- 3' Pex12 mmu-miR-27b beg:1208 end:1222 pic:3' CGTCTTGAATCGG-TGACACTT 5'& ||| ||||||| &5' ----------GCCTACTGTGA- 3' Pex12 mmu-miR-590-5p beg:1348 end:1364 pic:3' GACGTGAAAATACTTATTCGAG 5'& ||.|| |||||||| &5' ---CATTT------ATAAGCTC 3' Pex12 mmu-miR-376bstar beg:134 end:151 pic:3' ATTGGTATCTTCCT-TATAGGTG 5'& ||||| |||||||. &5' ---------AAGGATATATCCAT 3' Pex12 mmu-miR-376cstar beg:134 end:151 pic:3' ATTTGTATCTTCCT-TATAGGTG 5'& ||||| |||||||. &5' ---------AAGGATATATCCAT 3' Pex12 mmu-miR-433 beg:546 end:559 pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& .|.||||||| &5' -----------TCTATCATGA- 3' Pex12 mmu-miR-205 beg:738 end:755 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& ||| |. ||||||||. &5' -AGAGTT------AATGAAGGG 3' Pex12 mmu-miR-217 beg:685 end:702 pic:3' AGGTCAGTCAAGGACTACGTCAT 5'& .|| ||||||||| &5' -------GGTGA--GATGCAGTA 3' Pex12 mmu-miR-1930 beg:303 end:322 pic:3' TGCGACGTCCATGATACCTCCA 5'& || ||| || ||||||| &5' ACTCTGGAG-----ATGGAGG- 3' Pex12 mmu-miR-759 beg:302 end:312 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||||||| &5' --------------CACTCTG- 3' Pex12 mmu-miR-465a-3p beg:79 end:95 pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||||| |||||||. &5' --TACTT-------CCCTGATT 3' Pex12 mmu-miR-465b-3p beg:79 end:95 pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||||| |||||||. &5' --TACTT-------CCCTGATT 3' Pex12 mmu-miR-465c-3p beg:79 end:95 pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||||| |||||||. &5' --TACTT-------CCCTGATT 3' Pex12 mmu-miR-340-3p beg:39 end:58 pic:3' CGATATTTCATTGACTCTGCCT 5'& |||.| |||||||| &5' ----TAAGGCCA-TGAGACGG- 3' Pex12 mmu-miR-546 beg:328 end:348 pic:3' CTGAGGCA-CGGTGGTA 5'& || |.| |||||||| &5' GAGTTCAAGGCCACCAT 3' Pex12 mmu-miR-654-5p beg:1318 end:1334 pic:3' TGTGTACAAGACGTCGAATGGT 5'& .|| ||||||||| &5' ---------TTGAAGCTTACCA 3' Pex12 mmu-miR-369-3p beg:815 end:834 pic:3' TTTCTAGT-TGGTACATAATAA 5'& |||| .|.| ||||||| &5' ----ATCATGCTAGGTATTAT- 3' Pex12 mcmv-miR-M44-1 beg:124 end:144 pic:3' TGGCGCC-GAGACCTTTTTCTAT 5'& || .||| ||||.|||| &5' -----GGTTTCTTTAAAAGGATA 3' Pex12 mcmv-miR-m88-1 beg:958 end:979 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& |||.| |||.||||||| &5' AGATCAC--CATTGACTTCT- 3' Pex12 mghv-miR-M1-7-5p beg:1053 end:1075 pic:3' TCCAATGGCGTGG--A-GGTGGAAA 5'& || |||| | ||||||| &5' -----ACAGCACAGATACCACCTT- 3' Pex12 mmu-let-7c beg:917 end:938 pic:3' TTGGTATGTTGGATGATGGAGT 5'& |||| ||| |.|||.||| &5' AACC---CAAAAGATTACTTCA 3' Pex12 mmu-let-7g beg:920 end:938 pic:3' TTGACATGTTTGATGATGGAGT 5'& |||| |.|||.||| &5' -------CAAAAGATTACTTCA 3' Pex12 mmu-let-7i beg:1052 end:1075 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |||||||||.| ||| ||||. &5' AACAGCACAGA-TACCACCTT- 3' Pex12 mmu-let-7i beg:920 end:938 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |||| |.|||.||| &5' -------CAAAAGATTACTTCA 3' Pex12 mmu-miR-107 beg:885 end:905 pic:3' ACTATCGGGACATGTTACGACGA 5'& || .||| | ||||||. &5' ----AGAATTGTTCCATGCTGT- 3' Pex12 mmu-miR-1190 beg:791 end:812 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& |.||| |||||.||| &5' GGCAGTTTG----CTCAGTTGA 3' Pex12 mmu-miR-122 beg:295 end:311 pic:3' GTTTGTGGTAACAG---TGTGAGGT 5'& || ||||||. &5' -----------GTATCAACACTCT- 3' Pex12 mmu-miR-125a-5p beg:931 end:942 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||||||. &5' ----------------TTCAGGGG 3' Pex12 mmu-miR-125b-5p beg:920 end:942 pic:3' AGTGTTC-AATCCCAGAGTCCCT 5'& || ||| ||| .||||||. &5' -CAAAAGATTAC---TTCAGGGG 3' Pex12 mmu-miR-128 beg:1204 end:1222 pic:3' TTTCTCTGGCCAAGTGACACT 5'& ||| .|| .||||||| &5' -AAGT-GCC----TACTGTGA 3' Pex12 mmu-miR-135astar beg:413 end:433 pic:3' GCGGTG-CCGAGGTTAGGGATAT 5'& || ||.| .| ||.|||| &5' --CCTCAGGTTA-GA-CCTTATA 3' Pex12 mmu-miR-136 beg:302 end:321 pic:3' GGTAGT-AGTTTTGTTTACCTCA 5'& || || . |.|||||| &5' ----CACTCT--GGAGATGGAG- 3' Pex12 mmu-miR-145star beg:391 end:413 pic:3' GTTCTTGTCATAAAG-GTCCTTA 5'& |.|.|.| || || |||||| &5' -AGGGATAAAATATCACAGGAA- 3' Pex12 mmu-miR-145star beg:1104 end:1125 pic:3' GTTCTTGTCATAA---AGGTCCTTA 5'& .||| |..||||| &5' ------TAGTTGCTTGTTTAGGAA- 3' Pex12 mmu-miR-17 beg:1207 end:1231 pic:3' GATGGACGTGACATTC-GTGAAAC 5'& |.||| |||||.| ||. || &5' -TGCCT--ACTGTGATTCATGCTG 3' Pex12 mmu-miR-188-5p beg:379 end:398 pic:3' GGGAGGTGGTACG--TTCCCTAC 5'& ||. .|||||| &5' ------ACTGATTAAGAGGGAT- 3' Pex12 mmu-miR-18astar beg:739 end:759 pic:3' GTCTTCCTCG--TGAATCCCGTCA 5'& |||. |. ||||||| &5' ------GAGTTAATGAAGGGCAG- 3' Pex12 mmu-miR-18b beg:1050 end:1076 pic:3' GATTGTCGTGATCTAC-GTGGAAT 5'& |||||||||| |||| ||||||. &5' CTAACAGCAC-AGATACCACCTTG 3' Pex12 mmu-miR-1904 beg:726 end:761 pic:3' GGAGGGAGG---TCTC--------CTCGTCTTG 5'& ||| ||| |||| |.|||||| &5' CCTACCTAGTGAAGAGTTAATGAAGGGCAGAA- 3' Pex12 mmu-miR-1927 beg:929 end:944 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& || |.|||.|||. &5' ----------AC-TTCAGGGGTT 3' Pex12 mmu-miR-1928 beg:276 end:292 pic:3' CTCGACCGTTACATCGA 5'& ||.||| ||||.|. &5' -AGTTGG--ATGTGGT- 3' Pex12 mmu-miR-1930 beg:216 end:239 pic:3' TGCGACGTCCATG---ATACCTCCA 5'& ||. | .| |.||||||| &5' ----TGTGAGAGCCAATGTGGAGGT 3' Pex12 mmu-miR-1931 beg:1059 end:1079 pic:3' CGGTAGC-GTGGTCGGGAACGTA 5'& || | .|||| |||||.|| &5' --CACAGATACCA--CCTTGTAT 3' Pex12 mmu-miR-1933-5p beg:543 end:561 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& || .|.||||||| &5' ---------CCATCTATCATGACT 3' Pex12 mmu-miR-1949 beg:203 end:222 pic:3' TTGATACGACT-GTAGG-ACCATATC 5'& || .||| ||||.|. &5' ---------GATTATCGGTGGTGTG- 3' Pex12 mmu-miR-1950 beg:679 end:700 pic:3' ACTGGTATAGGAATCTACGTCT 5'& |.| ||. |||||||| &5' -GGCAATGGTG--AGATGCAG- 3' Pex12 mmu-miR-1953 beg:495 end:515 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |||| | |.||||||.| &5' CAGA--CAT--GGACTTTCTC- 3' Pex12 mmu-miR-1960 beg:1043 end:1063 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .||| |||||||||||| &5' --TCCTGTTCTAACAGCAC--- 3' Pex12 mmu-miR-1969 beg:536 end:552 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& .||| .||||||| &5' GCCCC---------TTCCATCT- 3' Pex12 mmu-miR-196a beg:718 end:737 pic:3' GGGTTGTTGTACTTT-GATGGAT 5'& || ||| ||||||| &5' -------ACCTGATGCCTACCTA 3' Pex12 mmu-miR-196a beg:918 end:936 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& ||||| |.|.|||.| &5' CCCAAA------AGATTACTT- 3' Pex12 mmu-miR-196b beg:719 end:737 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& || |. .| ||||||| &5' CCTGAT-GC------CTACCTA 3' Pex12 mmu-miR-1970 beg:64 end:85 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& .|| | | ||||||.|| &5' ---GGCAGA-CAACAGTGATAC- 3' Pex12 mmu-miR-1982.1 beg:679 end:695 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ..|| ||||||| &5' ---------GGCAAT-GGTGAGA 3' Pex12 mmu-miR-199bstar beg:1117 end:1140 pic:3' CTTGTCCATC-AGAT-TTGTGACCC 5'& .||| || |.|| .|||.||| &5' ---TAGGAAGATTTATGACATTGG- 3' Pex12 mmu-miR-200astar beg:679 end:697 pic:3' AGGTCGTGACAGGCCATTCTAC 5'& .||| .|||.||||| &5' ---GGCAA----TGGTGAGATG 3' Pex12 mmu-miR-200bstar beg:680 end:697 pic:3' AGGTTACGACGGG-TCATTCTAC 5'& || .||.||||| &5' ---------GCAATGGTGAGATG 3' Pex12 mmu-miR-203 beg:642 end:663 pic:3' GATCACCAGGATTTGTAAAGTG 5'& || |||. |||||| &5' --AGGAGTCTGGAA-ATTTCA- 3' Pex12 mmu-miR-205 beg:303 end:322 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& ||||.|| .|||.||| &5' ---ACTCTGGA--GATGGAGG- 3' Pex12 mmu-miR-20astar beg:685 end:701 pic:3' GAAATTCACGAGCATTACGTCA 5'& .||| .||||||| &5' -----GGTGA----GATGCAGT 3' Pex12 mmu-miR-2135 beg:1374 end:1393 pic:3' CAAAGCCGGGG-----TTCTGGAGA 5'& || ||||.||. &5' --------CCAAAATAAAGATCTT- 3' Pex12 mmu-miR-2140 beg:976 end:997 pic:3' TGGTGGTTCT---AGACGTGGA 5'& . ||| ||||.|.|| &5' ----TGAAGTTTTTCTGTATCT 3' Pex12 mmu-miR-2183 beg:932 end:947 pic:3' TCCTCCAGTCCCCAAGTT 5'& |||||||||.|| &5' ------TCAGGGGTTTAA 3' Pex12 mmu-miR-22 beg:779 end:802 pic:3' TGTCAAGA-AGTTGACCGTCGAA 5'& ||||. |||||||||||.|| &5' --AGTTTGCTCAACTGGCAGTTT 3' Pex12 mmu-miR-223 beg:373 end:388 pic:3' ACCCCATAAACTGTTTGACTGT 5'& ||| |.|||||. &5' ---------TGAGAGACTGAT- 3' Pex12 mmu-miR-224 beg:543 end:563 pic:3' TTGCCTTGGT-GATC--ACTGAAT 5'& ||| ||| ||||||| &5' -------CCATCTATCATGACTTA 3' Pex12 mmu-miR-23b beg:203 end:223 pic:3' CCATTAGGGACCGTTACACTA 5'& .||. || .||||| &5' ---GATTATCGGTGGTGTGA- 3' Pex12 mmu-miR-27astar beg:782 end:806 pic:3' ACGAGTGT-TCGTCGATTCGGGA 5'& |||||| .||||.| ||.| &5' TGCTCAACTGGCAGTTT-GCTC- 3' Pex12 mmu-miR-298 beg:747 end:771 pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& ||||..||| |.|||||. &5' --GAAGGGCAGAAGCCTTCTGCT 3' Pex12 mmu-miR-29bstar beg:1169 end:1192 pic:3' ATTTGGTGGTATAC-TTTGGTCG 5'& |||.||..| ||| ||.|||| &5' -AAATCATTA-ATGCAAGCCAG- 3' Pex12 mmu-miR-29bstar beg:657 end:681 pic:3' ATTTGGTGGTA--TAC-TTTGGTCG 5'& .|| .|| ||| ||||.||| &5' ----TCAGTATGAATGAAAACTAGC 3' Pex12 mmu-miR-302a beg:571 end:593 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& |||| ||||.||. &5' --ACCACAGTTTATCAGCATTTG 3' Pex12 mmu-miR-302cstar beg:414 end:437 pic:3' CGTCCA--TTGGGGTACAATTTCG 5'& ||||| .|||..| |||||| &5' -CAGGTTAGACCTTA---TAAAGC 3' Pex12 mmu-miR-30a beg:702 end:723 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& ||| |||||||| &5' --TCCTTATCTA-ATGTTTAC- 3' Pex12 mmu-miR-30b beg:620 end:642 pic:3' TCGACTCACATCCT--ACAAATGT 5'& .||.| ||||. ||||||.| &5' --TTGGGA-TAGGGTTTGTTTATA 3' Pex12 mmu-miR-30c beg:619 end:642 pic:3' CGACTCTCACATCCT--ACAAATGT 5'& .||.|| ||||. ||||||.| &5' -TTGGGA---TAGGGTTTGTTTATA 3' Pex12 mmu-miR-30c-1star beg:529 end:549 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& ||| ||| |.||| ||.||| &5' -GAG-AAA-AGCCC-CTTCCA- 3' Pex12 mmu-miR-30c-2star beg:528 end:549 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||| ||| |||| ||.||| &5' AGAG-AAA-AGCCC-CTTCCA- 3' Pex12 mmu-miR-30c-2star beg:749 end:768 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ||.| |.| |||||||| | &5' AGGGCAGA-AGCCTTCTGC--- 3' Pex12 mmu-miR-30d beg:626 end:642 pic:3' GAAGGTCAGCCCCTACAAATGT 5'& ||| ||||||.| &5' ---------GGGTTTGTTTATA 3' Pex12 mmu-miR-30d beg:702 end:723 pic:3' GAAGGTCAGCCCCTACAAATGT 5'& ||| |||||||| &5' --TCCTTATCTA-ATGTTTAC- 3' Pex12 mmu-miR-30e beg:702 end:723 pic:3' GAAGGTC-AGTTCCTACAAATGT 5'& ||| || |||||||| &5' --TCCTTATCTA--ATGTTTAC- 3' Pex12 mmu-miR-30e beg:624 end:642 pic:3' GAAGGTCAGTTCCT-ACAAATGT 5'& .|.|| ||||||.| &5' --------TAGGGTTTGTTTATA 3' Pex12 mmu-miR-331-5p beg:597 end:619 pic:3' CCTAGGGACC-CT-GGTATGGATC 5'& |||.|| || ||||||.|. &5' ---TCCTTGATGATCCATACTTG- 3' Pex12 mmu-miR-335-3p beg:354 end:376 pic:3' CCAGTCCTCGTTATTACTTTTT 5'& |||| ||.|| |||||||. &5' -GTCAAAAGTAA-AATGAAAG- 3' Pex12 mmu-miR-33 beg:676 end:699 pic:3' ACGTTACGTTGATG--TTACGTG 5'& |||. ||||. .||||| &5' -GCAG-GCAATGGTGAGATGCA- 3' Pex12 mmu-miR-338-3p beg:1211 end:1232 pic:3' GTTGTTTTAGTGAC------TACGACCT 5'& .|||| ||||||| &5' ---------TACTGTGATTCATGCTGG- 3' Pex12 mmu-miR-346 beg:53 end:75 pic:3' TCTCCGTC--CGTGAGCCCGTCTGT 5'& ||. |.|. |||||||| &5' ---GGTTTTAGTAT---GGCAGACA 3' Pex12 mmu-miR-351 beg:920 end:942 pic:3' GTCCGAGTTTCCCGA-GGAGTCCCT 5'& |||| | | |.||||||. &5' ------CAAAAGATTACTTCAGGGG 3' Pex12 mmu-miR-374star beg:1252 end:1275 pic:3' GAGCCTGTTACT---ATTATGTTGG 5'& | || |||| |.|||.|||. &5' ---GTACCATGAACATGATATAACT 3' Pex12 mmu-miR-378star beg:190 end:208 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .||||| || |||||| &5' --GCAGGA----GAATCAGGA- 3' Pex12 mmu-miR-379 beg:570 end:586 pic:3' GGATGCAAGGTATCAGATGGT 5'& ||| |||.||.|| &5' --------CCACAGTTTATCA 3' Pex12 mmu-miR-379 beg:539 end:556 pic:3' GGATGCAAGGTATCAGATGGT 5'& ||| |||| ||||.|| &5' CCT----TCCA---TCTATCA 3' Pex12 mmu-miR-380-3p beg:280 end:302 pic:3' TTCTACACC-TGGTATGATGTAT 5'& .||||||| | .||| ||. &5' -GGATGTGGTAGTATAGTAT--- 3' Pex12 mmu-miR-381 beg:1058 end:1080 pic:3' TGTCTCTCGAACGGGAACATAT 5'& ||||| ||||||||. &5' ACAGATACCA---CCTTGTATG 3' Pex12 mmu-miR-382 beg:1260 end:1277 pic:3' GCTTAGGTGGTGCT-TGTTGAAG 5'& ||.|| |.|||||. &5' ---------CATGATATAACTTT 3' Pex12 mmu-miR-382 beg:1154 end:1168 pic:3' GCTTAGGTGGTGC-TTGTTGAAG 5'& | ||||.|||| &5' ------------GAAACAGCTTC 3' Pex12 mmu-miR-384-3p beg:1106 end:1125 pic:3' TAACACTTGTTAAAGATCCTTA 5'& || .| |.|||||| &5' ---GTT-GCTTG-TTTAGGAA- 3' Pex12 mmu-miR-384-3p beg:869 end:887 pic:3' TAACACTTGTTA-AAGATCCTTA 5'& ||| ||||.|||| &5' -------ACATGATTCTGGGAA- 3' Pex12 mmu-miR-384-5p beg:1109 end:1132 pic:3' TGTAACGGATCCTTAACAAATGT 5'& .| |||..|||||| ||||. &5' GC-TTGTTTAGGAAGA-TTTAT- 3' Pex12 mmu-miR-384-5p beg:618 end:642 pic:3' TGTAACGG-ATCCTTAACAAATGT 5'& ||| |||| |||||||.| &5' ---TTGGGATAGGGTTTGTTTATA 3' Pex12 mmu-miR-431 beg:311 end:328 pic:3' ACGTACTGCCGGACGTTCTGT 5'& ||.|| |||.||. &5' -----GATGGAG-GCAGGAT- 3' Pex12 mmu-miR-431star beg:534 end:562 pic:3' TCTTCGGGAC--GTTC----TGCTGGAC 5'& |||||| || |.|||.| &5' --AAGCCCCTTCCATCTATCATGACTT- 3' Pex12 mmu-miR-432 beg:918 end:941 pic:3' GACGGGTGA-CTAGATGAGGTTCT 5'& |||| |||. |||.||.|. &5' ---CCCAAAAGATT-ACTTCAGGG 3' Pex12 mmu-miR-432 beg:20 end:47 pic:3' GACGGGTGACT---AGA--TGAGGTTCT 5'& ||||| ||| ||||.|||. &5' ----CCACTCAAGTTCTATACTCTAAGG 3' Pex12 mmu-miR-433 beg:763 end:782 pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& |.| ||.| |||||| &5' ---CTGCTT-GCTC-TCATGA- 3' Pex12 mmu-miR-433 beg:898 end:911 pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& |..||||||| &5' ------------CTGTCATGAT 3' Pex12 mmu-miR-466f-5p beg:1254 end:1274 pic:3' GTACGTGTACGTGTGTGTGCAT 5'& |||| ||||| |.|.| || &5' CATGAACATG-ATATA-AC--- 3' Pex12 mmu-miR-469 beg:302 end:324 pic:3' CCTGTGGT-TCTAGTTACTTTCTCCGT 5'& ||||. .|| || .|||||| &5' --ACACTCTGGA-----GATGGAGGCA 3' Pex12 mmu-miR-491 beg:159 end:181 pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& |||. ||| | ||.|.|| &5' CCTTTTGGTTT-GCTCTCTAC- 3' Pex12 mmu-miR-493 beg:495 end:513 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& || ||| ||||.||| &5' -----CAGACAT--GGACTTTC- 3' Pex12 mmu-miR-505 beg:405 end:427 pic:3' TCTTTTGGTCGTTCACAACTGC 5'& ||.||||| ||.|| ||| &5' AGGAAACCT-CAGGTTA-GAC- 3' Pex12 mmu-miR-542-3p beg:894 end:908 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& || ||||||. &5' ----------CATGCTGTCAT- 3' Pex12 mmu-miR-544 beg:181 end:199 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||| |.||| ||||.| &5' -AGCTGGTTAA----GCAGGA- 3' Pex12 mmu-miR-654-3p beg:485 end:506 pic:3' TTCCACTACC--AGTCGTCTGTAT 5'& || || |.| |||||||. &5' -----GA-GGCTTTATCAGACATG 3' Pex12 mmu-miR-668 beg:60 end:84 pic:3' CCATCAC-CCGGCTCGGC-TCACTGT 5'& |||| ||| || | |||||.| &5' --TAGTATGGCAGA-CAACAGTGATA 3' Pex12 mmu-miR-669a beg:1254 end:1275 pic:3' TGTACTTGTACGTGTGTGTTGA 5'& |||||||||| |.|.|||| &5' -CATGAACATG---ATATAACT 3' Pex12 mmu-miR-670 beg:919 end:943 pic:3' AAGTGGTGT----ATGTGAGTCCCTA 5'& | ||| ||| .||||||.| &5' --C-CCAAAAGATTAC-TTCAGGGGT 3' Pex12 mmu-miR-672 beg:398 end:419 pic:3' AGTGT-GTGTCATGTGGTTGGAGT 5'& |.| ||||| ||||||| &5' --ATATCACAGGA----AACCTCA 3' Pex12 mmu-miR-686 beg:439 end:455 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||.|||||||||. &5' --------GTTTGGGAAGCAG- 3' Pex12 mmu-miR-686 beg:302 end:324 pic:3' AGAAGTGGCAGAC-----CCTTCGTTA 5'& ||| |||| |||.|||. &5' ----CAC--TCTGGAGATGGAGGCAG- 3' Pex12 mmu-miR-703 beg:930 end:945 pic:3' AAGAAAGGAAGACTTCCAAAA 5'& |||| ..||||| &5' -------CTTCA-GGGGTTT- 3' Pex12 mmu-miR-706 beg:115 end:135 pic:3' AAAAAACTCTGT-CCCAAAGAGA 5'& | ||| ||||||||.| &5' ------GTTACATGGGTTTCTTT 3' Pex12 mmu-miR-708 beg:1148 end:1169 pic:3' GGGTCGA-TCTAACATTCGAGGAA 5'& | |. ||| ||||.|| &5' -CTGGTGAAGAAAC--AGCTTCT- 3' Pex12 mmu-miR-708star beg:1092 end:1113 pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |||| | |||.|||||| &5' --AGAAACAAA-AGTTTAGTTG 3' Pex12 mmu-miR-764-5p beg:1227 end:1243 pic:3' TCCTCCTGTACACTCGTGG 5'& |.|| |||||.| &5' -----GGCAATTGAGCGC- 3' Pex12 mmu-miR-767 beg:199 end:221 pic:3' ACGAGTCTGTT--GGTACCACGT 5'& ||||. | .|||||. &5' ---TCAGGATTATCGGTGGTGT- 3' Pex12 mmu-miR-7astar beg:619 end:638 pic:3' ATACCGTCTGACACTAAACAAC 5'& ||| ||. | |.|||||| &5' --TGG--GATAG-GGTTTGTT- 3' Pex12 mmu-miR-878-3p beg:892 end:909 pic:3' AGATGGGTCACACCACAGTACG 5'& .||| || ||||||| &5' ----TCCA---TGCTGTCATG- 3' Pex12 mmu-miR-879 beg:749 end:766 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||.|| ||||||. &5' -----AGGGCAG-AAGCCTT- 3' Pex12 mmu-miR-879star beg:765 end:784 pic:3' GGCTTTCGAACTTCGGTATTCG 5'& ||||| .|||.||. &5' ------GCTTGCTCTCATGAGT 3' Pex12 mmu-miR-9star beg:473 end:498 pic:3' TGAAAGCC-AATAGATCGAAATA 5'& |||||.| ||| .||||||| &5' ACTTTTGAATTAGA-GGCTTTAT 3' Pex12 mmu-miR-27bstar beg:1345 end:1365 pic:3' CAAGTGGTTAGTCG--ATTCGAGA 5'& .|||| |||||||| &5' -------GATCATTTATAAGCTCT 3' Pex12 mcmv-miR-m01-2 beg:449 end:466 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& ||. || |||||||. &5' -------CAGGCC--TTCTCTTT 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Pex12 RAID00062194 mmu-miR-3105-3p miRNA MIMAT0014942 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00075689 mmu-miR-7053-3p miRNA MIMAT0028011 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00169245 mmu-miR-384-5p miRNA MIMAT0004745 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00236235 mmu-miR-376c-3p miRNA MIMAT0003183 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00265146 mmu-miR-465a-3p miRNA MIMAT0004217 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00407402 mmu-miR-342-3p miRNA MIMAT0000590 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00422137 mmu-miR-433-3p miRNA MIMAT0001420 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00437668 mmu-miR-182-5p miRNA MIMAT0000211 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00448719 mmu-miR-3475-5p miRNA MIMAT0026642 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00709231 mmu-miR-30c-5p miRNA MIMAT0000514 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00849955 mmu-miR-7675-3p miRNA MIMAT0029859 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00912049 mmu-miR-7224-5p miRNA MIMAT0028416 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00963651 mmu-miR-465b-3p miRNA MIMAT0004872 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID00986950 mmu-miR-6417 miRNA MIMAT0025172 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01003589 mmu-miR-10a-5p miRNA MIMAT0000648 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01009980 mmu-miR-590-5p miRNA MIMAT0004895 Pex12 mRNA 103737 Prediction 0.2202 Pex12 RAID01031691 mmu-miR-30b-5p miRNA MIMAT0000130 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01106234 mmu-miR-707 miRNA MIMAT0003497 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01187951 mmu-miR-6976-3p miRNA MIMAT0027855 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01271204 mmu-miR-135a-5p miRNA MIMAT0000147 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01342638 mmu-miR-21c miRNA MIMAT0025148 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01346776 mmu-miR-30a-5p miRNA MIMAT0000128 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01411557 mmu-miR-7215-5p miRNA MIMAT0028398 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01472251 mmu-miR-96-3p miRNA MIMAT0017021 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01559831 mmu-miR-217-5p miRNA MIMAT0000679 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01569812 mmu-miR-135b-5p miRNA MIMAT0000612 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01873615 mmu-miR-23a-3p miRNA MIMAT0000532 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID01907000 mmu-miR-27b-3p miRNA MIMAT0000126 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02043642 mmu-miR-3112-5p miRNA MIMAT0014955 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02195119 mmu-miR-191-5p miRNA MIMAT0000221 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02276307 mmu-miR-1912-3p miRNA MIMAT0014958 Pex12 mRNA 103737 CLIP-seq 0.5483 Pex12 RAID02317067 mmu-miR-21a-5p miRNA MIMAT0000530 Pex12 mRNA 103737 Prediction 0.2202 Pex12 RAID02351302 mmu-miR-338-3p miRNA MIMAT0000582 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02460400 mmu-miR-205-5p miRNA MIMAT0000238 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02499091 mmu-miR-878-3p miRNA MIMAT0004933 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02544746 mmu-miR-7022-5p miRNA MIMAT0027948 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02640487 mmu-miR-30d-5p miRNA MIMAT0000515 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02773275 mmu-miR-144-3p miRNA MIMAT0000156 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02827626 mmu-miR-346-5p miRNA MIMAT0000597 Pex12 mRNA 103737 Prediction 0.2202 Pex12 RAID02864208 mmu-miR-1192 miRNA MIMAT0005850 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02872615 mmu-miR-495-3p miRNA MIMAT0003456 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02891880 mmu-miR-23b-3p miRNA MIMAT0000125 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02904515 mmu-miR-6944-3p miRNA MIMAT0027789 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02908828 mmu-miR-7214-5p miRNA MIMAT0028396 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02909165 mmu-miR-7034-3p miRNA MIMAT0027973 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02925602 mmu-miR-216a-5p miRNA MIMAT0000662 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID02990650 mmu-miR-30e-5p miRNA MIMAT0000248 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03038479 mmu-miR-6715-3p miRNA MIMAT0029877 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03349538 mmu-miR-7211-5p miRNA MIMAT0028390 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03448158 mmu-miR-27a-3p miRNA MIMAT0000537 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03554401 mmu-miR-465c-3p miRNA MIMAT0004874 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03628789 mmu-miR-5623-3p miRNA MIMAT0022374 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03638913 mmu-miR-375-3p miRNA MIMAT0000739 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03671356 mmu-miR-381-3p miRNA MIMAT0000746 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03890060 mmu-miR-376b-3p miRNA MIMAT0001092 Pex12 mRNA 103737 Prediction 0.2381 Pex12 RAID03927881 mmu-miR-501-5p miRNA MIMAT0003508 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03938608 mmu-miR-340-5p miRNA MIMAT0004651 Pex12 mRNA 103737 Prediction 0.1828 Pex12 RAID03972751 mmu-miR-3081-3p miRNA MIMAT0014871 Pex12 mRNA 103737 Prediction 0.1828