Usp44
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Usp44ATTTA239-17562239-2243;2652-2656
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004523mmu-miR-29b*327799Usp44auUUGGUGGUAUAC-UUUGGUCg || || : || ||||||| ggAAGAACAGGCUGCAAACCAGa221734756[mm9:10:93310827-93310849:+]0.53561477-12.45-0.3807
MIMAT0000129mmu-miR-30a*327799Usp44cgACGUUUGUAGGCUGACUUUc | ::| || :|||||||| ucUCUGAUCA-AUGACUGAAAa221182202[mm9:10:93310275-93310295:+]0.50071507-16.23-0.3778
MIMAT0000152mmu-miR-140*327799Usp44ggcacCAAGAUGGGACACCAu || :| :|||||||| uaucuGUGUUUUCCUGUGGUc217917937[mm9:10:93311010-93311030:+]0.50051567-22.38-0.3110
MIMAT0004533mmu-miR-141*327799Usp44agGUUGUGACGUGACCUUC-UAc |||:::||| ||||| || cuCAAUGUUGC---GGAAGCAUu221128147[mm9:10:93310221-93310240:+]0.50071200-15.50-0.1145
MIMAT0004540mmu-miR-186*327799Usp44ggguuuuuuaAGUGGAAUCCCg | ::||||||| uguuuuccugUGGUCUUAGGGg213923944[mm9:10:93311016-93311037:+]0.50051447-14.82-0.1051
MIMAT0000249mmu-miR-30e*327799Usp44cgACAUUUGUAGGCUGACUUUc | |:| || :|||||||| ucUCUGAUCA-AUGACUGAAAa221182202[mm9:10:93310275-93310295:+]0.50071547-15.18-0.3778
MIMAT0000367mmu-miR-291a-5p327799Usp44ucUCUCCCGGAGGUGAAAC-UAc | | ||::|:| ||||| || cuAAAUGGUUUUC-CUUUGUAUu221684705[mm9:10:93310777-93310798:+]0.54941220-13.52-0.2621
MIMAT0004574mmu-miR-294*327799Usp44ucUAUCCCGGAGGUAAA-ACUCa || ||: |:|||| |||| uaAUUUUGCUACUAUUUAUGAGu221883905[mm9:10:93310976-93310998:+]0.50051240-12.53-0.9359
MIMAT0004620mmu-let-7a*327799Usp44ccUUUCUGUCAUCUAAC-AUAUc :|:|||| ||| ||| |||| ugGAGGACA-UAG-UUGCUAUAc221543563[mm9:10:93310636-93310656:+]0.50151280-14.16-0.3124
MIMAT0004621mmu-let-7b*327799Usp44ccCUUCCGUCAUCCAAC-AUAUc ||:| || || |||| |||| ugGAGGACA-UA-GUUGCUAUAc221543563[mm9:10:93310636-93310656:+]0.50151240-12.04-0.3387
MIMAT0005439mmu-let-7c-2*327799Usp44ccUUUCUGUCAUCUAAC-AUAUc :|:|||| ||| ||| |||| ugGAGGACA-UAG-UUGCUAUAc221543563[mm9:10:93310636-93310656:+]0.50151280-14.16-0.3124
MIMAT0004623mmu-let-7f*327799Usp44ccCUUCCGUUAUCUAAC-AUAUc |:||| |||| ||| |||| cuGGAGGACAUAG-UUGCUAUAc221542563[mm9:10:93310635-93310656:+]0.50151300-12.46-0.3151
MIMAT0004625mmu-miR-16*327799Usp44agucgUC-GUGUCAGUUAUGACc || :| |||:||||||| gauuaAGAUAGAGUUAAUACUGc218364386[mm9:10:93310457-93310479:+]0.50071607-16.21-0.3800
MIMAT0004625mmu-miR-16*327799Usp44agUCGUCGUGUCAGUUA-UGACc ||| : :: ||||| |||| aaAGCUCUCUGAUCAAUGACUGa221177199[mm9:10:93310270-93310292:+]0.50071200-10.96-0.4759
MIMAT0004628mmu-miR-21*327799Usp44cugucggguagcugaCGACAAc |||||| uguugugcccuuaaaGCUGUUa28392413[mm9:10:93310485-93310506:+]0.50071206-12.54-0.1069
MIMAT0004629mmu-miR-22*327799Usp44auuucGAACGGUGACUUCUUGa || |:::: ||||||| uuuucCUAGUUGUGGAAGAACa218721742[mm9:10:93310814-93310835:+]0.54941537-10.96-0.3493
MIMAT0004630mmu-miR-26b*327799Usp44cucGGUUCAUUACC-UCUUGUCc || ||| :||| ||||||| uuuCCUAGUUGUGGAAGAACAGg220722744[mm9:10:93310815-93310837:+]0.54941667-25.78-0.2069
MIMAT0000544mmu-miR-129-3p327799Usp44uacgAAAA---ACCCC--AUUCCCGAa |||| || || ||||||| uguaUUUUAGCUGCGGCAGAAGGGCUu219844870[mm9:10:93310937-93310963:+]0.49961447-18.39-0.2059
MIMAT0004640mmu-miR-325327799Usp44aacuauccuccACGAGUUAUUu || ||||||| uauuccuugauUGGUCAAUAAa212158179[mm9:10:93310251-93310272:+]0.50071477-10.44-0.3611
MIMAT0004668mmu-miR-138*327799Usp44ggGACCACAACACUUCAUCGGc || |||| ||||||||| gcCUUUAGUUGGGAAGUAGCCa221329350[mm9:10:93310422-93310443:+]0.50071687-24.33-0.5154
MIMAT0004704mmu-miR-335-3p327799Usp44ccagucCUCGUUAUU-ACUUUUu || ||||:| |||||| cucucuGAUCAAUGACUGAAAAg217181203[mm9:10:93310274-93310296:+]0.50071326-10.95-0.1844
MIMAT0001637mmu-miR-452327799Usp44cagagucaaaggaGACGUUUGu |||||||| guggaagaacaggCUGCAAACc210732753[mm9:10:93310825-93310846:+]0.53561457-14.32-0.1677
MIMAT0002105mmu-miR-464327799Usp44auAGAGUGUCUUAUUUGAACCAu ||| || |:|::||||||| ccUCUGAC-CAGUGGACUUGGUa222775796[mm9:10:93310868-93310889:+]0.54041637-21.04-0.1546
MIMAT0004760mmu-miR-470*327799Usp44agaagaGUCUUUCCAUGAC-CAa || || | ||||| || gguagaCAUAAUGUUACUGUGUc2172547[mm9:10:93310118-93310140:+]0.51061200-8.89-0.4977
MIMAT0003120mmu-miR-483*327799Usp44uucUGCCCU-CCCCUC-CUCACu | |||| |||||| ||||| gccAGGGGAGGGGGAGAGAGUGa219233255[mm9:10:93310326-93310348:+]0.50071370-32.06-0.1314
MIMAT0003167mmu-miR-540-3p327799Usp44gguccUAGCUGGAGACUGGa :| | ||||||||| acacaGUGGUCCUCUGACCa216765784[mm9:10:93310858-93310877:+]0.53621557-23.08-0.1289
MIMAT0004789mmu-miR-450a-3p327799Usp44uaCUUACGUUUCGUAGGGGUUa |:| ||| || ||||||| gcGGAAGCAUUGC-UCCCCAAu221137157[mm9:10:93310230-93310250:+]0.50071587-22.81-0.2358
MIMAT0003189mmu-miR-291b-5p327799Usp44ccUCUCCCGGAGGUGAAAC-UAg | | ||::|:| ||||| || cuAAAUGGUUUUC-CUUUGUAUu221684705[mm9:10:93310777-93310798:+]0.54941220-13.52-0.2621
MIMAT0003190mmu-miR-291b-3p327799Usp44uguuUGUUUUACCUACGUGAAa || |:: | ||||||| cuuuAC-AGGCGUCUGCACUUa21911301150[mm9:10:93311223-93311243:+]0.50051447-13.51-0.2880
MIMAT0004820mmu-miR-744*327799Usp44uccaACUC--CAAUCACCGUUGUc |||| ||| ||||||| uacaUGAGCAGUUUCAGGCAACAu219581604[mm9:10:93310674-93310697:+]0.50241537-14.67-0.7675
MIMAT0015219mmu-miR-3475327799Usp44aaguuugguacACGGAGGUCu ||||||||| acuugguaaacUGCCUCCAGu211789809[mm9:10:93310882-93310902:+]0.54041507-20.31-0.1385
MIMAT0004188mmu-miR-802327799Usp44uuCCUA-CUUAGAAACAAUGACu ||:| || : |||||||| gaGGGUAGACAUAAUGUUACUGu2212244[mm9:10:93310115-93310137:+]0.51061517-17.74-0.4705
MIMAT0004188mmu-miR-802327799Usp44uucCUACUUA-GAAACAAUGACu ||||: | | ||||||| agaGAUGGUUAAGUGGUUACUGc22010141036[mm9:10:93311107-93311129:+]0.50051507-15.86-0.1125
MIMAT0004188mmu-miR-802327799Usp44uuCCUACUUAGAAACAAU-GACu | :|| :| | ||||| ||| guGUGUGUGUGUGUGUUACCUGg221523545[mm9:10:93310616-93310638:+]0.50071240-10.12-0.2456
MIMAT0003741mmu-miR-674*327799Usp44aacaAGACUCUACCCUCGACAc | ||| | ||||||| acccUGUGAAAGAAGAGCUGUu219945966[mm9:10:93311038-93311059:+]0.50051507-13.86-0.2919
MIMAT0003449mmu-miR-488*327799Usp44aacucucacgauaAUAGACCc ||||||| uucugugcccccaUAUCUGGu2986106[mm9:10:93310179-93310199:+]0.50031407-12.66-0.4408
MIMAT0004189mmu-miR-693-3p327799Usp44aaUGUCGGUGU-AGACUUUCGACg |: |::::: || ||||||| cuAUUGUUGUGCCCUUAAAGCUGu222388411[mm9:10:93310481-93310504:+]0.50071487-13.83-0.7869
MIMAT0005448mmu-miR-467b327799Usp44guAUAUGUACGU--CCGUGAAUg | |||| ||: ||||||| ucUUUACAGGCGUCUGCACUUAc22011291151[mm9:10:93311222-93311244:+]0.50051547-17.27-0.2392
MIMAT0003493mmu-miR-703327799Usp44aagaaAGGAAGACUU-CCAAAa || | || || ||||| auuaaUCAUCCUAAAUGGUUUu217674695[mm9:10:93310767-93310788:+]0.54941200-9.29-0.6541
MIMAT0003499mmu-miR-709327799Usp44aggagGACGGA-GACGGAGg || || ||||||| gguggCUCACUACUGCCUCu21510771096[mm9:10:93311170-93311189:+]0.50051457-19.73-0.2407
MIMAT0003499mmu-miR-709327799Usp44aggaggacggaGACGGAGg ||||||| gacuugguaaaCUGCCUCc29788806[mm9:10:93310881-93310899:+]0.54041407-20.97-0.5224
MIMAT0003511mmu-miR-450b-5p327799Usp44auaagUCCUUGUAUGACGUUUu | ||||| :||||||| uguggAAGAACAGGCUGCAAAc218731752[mm9:10:93310824-93310845:+]0.53561657-15.20-0.1283
MIMAT0004846mmu-miR-881327799Usp44agauaagucuuuucUGUGUCAa ||||||| accagauuccaucuACACAGUg29751772[mm9:10:93310844-93310865:+]0.53621407-11.71-0.1880
MIMAT0004863mmu-miR-220327799Usp44uucacagACUGUG-ACAC-CACc |||||| |||| ||| uuuaaaaUGACACGUGUGUGUGu215484506[mm9:10:93310577-93310589,93310590-93310599:+]0.50071250-17.48-0.2517
MIMAT0004877mmu-miR-466c-5p327799Usp44auacaUGUACGUGUGUGUGUag ||| |::|||||| ccaccACACAAAUGCACACAcu31811541175[mm9:10:93311247-93311268:+]0.50051330-16.02-0.1006
MIMAT0004884mmu-miR-466h327799Usp44auGUGUGUUCGUGUACGUGUGu ||| || || |||||||| ucCAC-CACACAAAUGCACACa22111531173[mm9:10:93311246-93311266:+]0.50051627-22.45-1.0622
MIMAT0004890mmu-miR-509-5p327799Usp44uacuAACGGUGUAAGACCUCAu |||| : : ||||||| gcucUUGCAGAGGACUGGAGUu21910351056[mm9:10:93311128-93311149:+]0.50051507-16.71-0.1954
MIMAT0004894mmu-miR-574-3p327799Usp44acacccacaCACGUACUCG-CAc || ||||||| || auuguuacaGUACAUGAGCAGUu214571593[mm9:10:93310664-93310686:+]0.50241210-12.92-0.5438
MIMAT0004930mmu-miR-466d-5p327799Usp44guacaUGUACAUGCGUGUGUGu ||| |:|||||||| ccaccACACAAAUGCACACACu21811541175[mm9:10:93311247-93311268:+]0.50051577-17.95-1.0090
MIMAT0005293mmu-miR-467e327799Usp44ugUAUAUGUACGAGUGUGAAUa | | | |||| |||||||| ccACACAAAUGCACACACUUAa22111571178[mm9:10:93311250-93311271:+]0.50051687-16.10-0.7629
MIMAT0005830mmu-miR-466l327799Usp44uuAUACACACGUACAUAAAUAu || | ||| ||||||| guUAAUUUUGCUACUAUUUAUg221881902[mm9:10:93310974-93310995:+]0.50051527-6.96-0.3647
MIMAT0005845mmu-miR-466k327799Usp44aguguacaUGUACAUGUGUGUGu ||| |:||||||| uccaccacACAAAUGCACACACu21611531175[mm9:10:93311246-93311268:+]0.50051557-17.25-1.0090
MIMAT0005848mmu-miR-466j327799Usp44aauGUGUGUACGUGUACGUGUGu ||| || || |||||||| aucCAC-CACACAAAUGCACACa22111521173[mm9:10:93311245-93311266:+]0.50051627-21.99-1.0622
MIMAT0005855mmu-miR-467h327799Usp44ugUAUAUGUACGUGUGUGAAUa | | | ||||||||||||| ccACACAAAUGCACACACUUAa22111571178[mm9:10:93311250-93311271:+]0.50051767-21.17-0.7629
MIMAT0005857mmu-miR-1196327799Usp44uccgucuccguccAUCUAAa |||||| auuuuuuuuuuuuUAGAUUa28658677[mm9:10:93310751-93310770:+]0.54941206-2.67-0.1861
MIMAT0005858mmu-miR-1197327799Usp44ucuucaUCUGGU-ACACAGGAu | :::| |||||||| gacauaAUGUUACUGUGUCCUg2162950[mm9:10:93310122-93310143:+]0.51061467-14.95-0.6180
MIMAT0007875mmu-miR-1898327799Usp44cuaGGGGACACUUGGAACUGGa ||:| |::|||||||| gacCCUCAAAGGGCCUUGACCc220968989[mm9:10:93311061-93311082:+]0.50051597-25.85-0.1022
MIMAT0007875mmu-miR-1898327799Usp44cuAGGGGACACUUGGA-ACUGGa | | | |||: ||| ||||| ucUACACAGUGGUCCUCUGACCa221762784[mm9:10:93310855-93310877:+]0.53621280-16.72-0.1257
MIMAT0007877mmu-miR-1894-5p327799Usp44ucUCCGUC----CACCAUCCCCUCUc :||||| |||| ||||||| ggGGGCAGUUUCCUGGU-GGGGAGAu221282306[mm9:10:93310375-93310399:+]0.50071537-30.76-0.1024
MIMAT0007877mmu-miR-1894-5p327799Usp44ucuccguccaccaUCCCCUCUc |||||||| ucaaugacugaaaAGGGGAGAc210189210[mm9:10:93310282-93310303:+]0.50071457-15.01-0.2274
MIMAT0009396mmu-miR-1933-5p327799Usp44uuuGAUUCUGGCU-UGUGGUACUGa ||:: : || |:|||||||| uucCUGGUGGGGAGAUACCAUGACc222291315[mm9:10:93310384-93310408:+]0.50071567-19.73-0.1461
MIMAT0009397mmu-miR-1933-3p327799Usp44uaUCAGUGUGAC--U-AC-CAGGACc || ||:| || | || |||||| guAGACAUAAUGUUACUGUGUCCUGc2212651[mm9:10:93310119-93310144:+]0.51061226-16.37-0.4829
MIMAT0009422mmu-miR-1951327799Usp44aucgGUGUGGUCAGAGGU-GAUg || ||||| :|||| ||| gcugCAAACCAGAUUCCAUCUAc219744766[mm9:10:93310837-93310859:+]0.53561340-22.87-0.3999
MIMAT0009425mmu-miR-1954327799Usp44uugUC-CCAGAG-UGAG-ACGUCa || |||: | :||| ||||| uuaAGUGGUUACUGCUCUUGCAGa21910221045[mm9:10:93311115-93311138:+]0.50051200-18.15-0.1776
MIMAT0009427mmu-miR-669n327799Usp44uguGUGUAGGU-GUGUGUUUa :||||||| |||||||| acuUACAUCCACCACACAAAu21811461166[mm9:10:93311239-93311259:+]0.50051727-25.09-0.1559
MIMAT0009431mmu-miR-1958327799Usp44ugAAUGACGAAG---GU-GAAAGGAu || : |||| || ||||||| caUUUUCCCUUCACACAGCUUUCCUu221818843[mm9:10:93310911-93310936:+]0.51491467-14.54-0.3412
MIMAT0009442mmu-miR-1969327799Usp44uggguACAAUU--UCAGAGGUAGAa || || || :||||||| caggcUGCAAACCAGAUUCCAUCUa219741765[mm9:10:93310834-93310858:+]0.53561497-13.21-0.7537
MIMAT0009442mmu-miR-1969327799Usp44ugGGUACAAUUUCAGAGGUA-GAa ::| | ||| |||||| || ggUUAAGAGAAAAACUCCAUACUc222457480[mm9:10:93310550-93310573:+]0.50071210-12.06-0.7908
MIMAT0009446mmu-miR-1971327799Usp44agagucgggUCGGAAAUg |||||||| agcagagggAGCCUUUAg210319336[mm9:10:93310412-93310429:+]0.50071457-14.54-0.1296
MIMAT0009458mmu-miR-1981327799Usp44cggugcagauucgggUCGGAAAUg |||||||| accuggagcagagggAGCCUUUAg210313336[mm9:10:93310406-93310429:+]0.50071457-15.24-0.1309
MIMAT0014852mmu-miR-3072*327799Usp44ggacgggagggAGCCCCAGGGa |: ||||||| gaggacuggagUUUGGGUCCCa21210441065[mm9:10:93311137-93311158:+]0.50051437-17.73-0.4183
MIMAT0000125mmu-miR-23b327799Usp44ccauuagggaCCGUUACACUa || ||||||| aguaggguaaGGAAAUGUGAu212639659[mm9:10:93310732-93310752:+]0.54941477-15.54-0.8474
MIMAT0000130mmu-miR-30b327799Usp44ucgACUCACAU-CCUACA-AAUGu || ||||: | :||| |||| gugUGUGUGUGUGUGUGUGUUACc220519542[mm9:10:93310612-93310635:+]0.50071260-12.17-0.2237
MIMAT0000141mmu-miR-130a327799Usp44uaCGGGAAA--AUUGUA-ACGUGAc ||:|||| ::|:| |||||| cuGCUCUUUACAGGCGUCUGCACUu22111251149[mm9:10:93311218-93311242:+]0.50051276-19.30-0.3105
MIMAT0000141mmu-miR-130a327799Usp44uacgggaaAAUUGUAACG-UGAc ||||: |||| ||| ucauaccgUUAAUUUUGCUACUa215874896[mm9:10:93310967-93310989:+]0.50051220-9.94-1.1802
MIMAT0000160mmu-miR-150327799Usp44gugaccauguucccAACCCUCu ||||||| ccaguuucgauuauUUGGGAGa29429450[mm9:10:93310522-93310543:+]0.50071407-14.27-1.0636
MIMAT0000208mmu-miR-10b327799Usp44guGUUUAAGCCA-AGAUGUC-CCAu ||:|||| | | |||| ||| acCAGAUUCCAUCUACACAGUGGUc222751775[mm9:10:93310844-93310868:+]0.53621240-16.45-0.1477
MIMAT0000214mmu-miR-185327799Usp44aguccuUGACGGAAAGA-GAGGu |||||| ||| |||| cucacuACUGCC--UCUACUCCa21710821102[mm9:10:93311175-93311195:+]0.50051210-21.49-0.1259
MIMAT0000387mmu-miR-130b327799Usp44uaCGGGAAA-GU-AGUA-ACGUGAc ||:|||| || |:| |||||| cuGCUCUUUACAGGCGUCUGCACUu22111251149[mm9:10:93311218-93311242:+]0.50051306-21.01-0.3079
MIMAT0000387mmu-miR-130b327799Usp44uacgGGAAAGUAGUAACG-UGAc || || ||: |||| ||| cauaCCGUUAAUU-UUGCUACUa219875896[mm9:10:93310968-93310989:+]0.50051200-8.39-1.1661
MIMAT0000514mmu-miR-30c327799Usp44cgACUCUCACAU-CCUACA-AAUGu || | ||||: | :||| |||| ugUGUGUGUGUGUGUGUGUGUUACc222518542[mm9:10:93310611-93310635:+]0.50071280-12.46-0.2237
MIMAT0000532mmu-miR-23a327799Usp44ccuuuagggaCCGUUACACUa || ||||||| aguaggguaaGGAAAUGUGAu212639659[mm9:10:93310732-93310752:+]0.54941477-13.39-0.8474
MIMAT0000538mmu-miR-31327799Usp44gucgaUACGGUCGUAGA-ACGGa ||||:: : ||| |||| uucaaAUGCUGAUUUCUGUGCCc2187395[mm9:10:93310166-93310188:+]0.50001210-13.19-0.6863
MIMAT0000648mmu-miR-10a327799Usp44guGUUUAAGCCUAGA--UGUC-CCAu ||:|||| |||| |||| ||| acCAGAUUC-CAUCUACACAGUGGUc222751775[mm9:10:93310844-93310868:+]0.53621300-17.55-0.1477
MIMAT0000659mmu-miR-212327799Usp44accGGCACUGACCUCU-GACAAu |:|||| | ||| ||||| accCUGUGAAAGAAGAGCUGUUc220945967[mm9:10:93311038-93311060:+]0.50051310-16.44-0.1291
MIMAT0000666mmu-miR-320327799Usp44agcGGGAGAGUUGGGUCGAAAa ::| ||: || ||||||| auuUUCCCUUCACACAGCUUUc220819840[mm9:10:93310912-93310933:+]0.51491597-18.34-0.3014
MIMAT0003151mmu-miR-378327799Usp44ggaagacugagguUCAGGUCa ||||||| aaauaaguauaauAGUCCAGu29413433[mm9:10:93310506-93310526:+]0.50071407-12.92-0.9587
MIMAT0000747mmu-miR-382327799Usp44gcuUAGGUGGUG------CUUGU-UGAAg ||||||||| | ||| |||| uacAUCCACCACACAAAUGCACACACUUa22011491177[mm9:10:93311242-93311270:+]0.50051220-18.25-1.0719
MIMAT0000748mmu-miR-383327799Usp44ucggugucagUGGAAGACUAGa :|: ||||||| ggucaauaaaGCUCUCUGAUCa213170191[mm9:10:93310263-93310284:+]0.50071447-17.35-0.5814
MIMAT0000766mmu-miR-335-5p327799Usp44uguaaaaAGCAAUAACGAGAACu | |||| |||||||| gguuaagUGGUUACUGCUCUUGc21710201042[mm9:10:93311113-93311135:+]0.50051647-15.72-0.2034
MIMAT0000766mmu-miR-335-5p327799Usp44ugUAAAAAGCAAUAACGAGA-ACu ||| || || ||||| || ugAUUGGUCAAUAAAGCUCUCUGa222165188[mm9:10:93310258-93310281:+]0.50071210-10.15-0.9181
MIMAT0004854mmu-miR-876-5p327799Usp44aucacuaagugucuCUUUAGGu ||||||| ccccauaucugguuGAAAUCCu2994115[mm9:10:93310187-93310208:+]0.50031407-9.06-0.7774
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G059617Usp44Mus musculus327799
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Usp44mmu-miR-29bstarbeg:739end:756pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |..| | ||||||| &5' -AGGCTGC------AAACCAG- 3'
Usp44mmu-miR-693-3pbeg:395end:412pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||| || |||||||. &5' -----GCC----CTTAAAGCTGT 3'
Usp44mghv-miR-M1-9beg:639end:659pic:3' TTTTTCCAGGTCCGTTTACACT 5'& |.||| ||| |||||||| &5' ---AGGGTA-AGG-AAATGTGA 3'
Usp44mmu-miR-16starbeg:369end:386pic:3' AGTCGTCGTGTCAGTTATGACC 5'& .| |||.||||||| &5' -------TAGAGTTAATACTG- 3'
Usp44mmu-miR-23bbeg:641end:660pic:3' CCATTAGGGACCGTTACACTA 5'& ||||| || |||||||| &5' GGTAA-----GGAAATGTGAT 3'
Usp44mmu-miR-23abeg:646end:660pic:3' CCTTTAGGGACCGTTACACTA 5'& || |||||||| &5' ----------GGAAATGTGAT 3'
Usp44mmu-miR-669nbeg:1147end:1167pic:3' TGTGTGTAGGT-GTGTGTTTA 5'& .||||||| ||||||||| &5' ---TACATCCACCACACAAAT 3'
Usp44mmu-miR-467ebeg:1162end:1178pic:3' TGTATATGTACGAGTGTGAATA 5'& |||| |||||||| &5' --------ATGCACACACTTA- 3'
Usp44mmu-miR-467hbeg:1162end:1178pic:3' TGTATATGTACGTGTGTGAATA 5'& ||||||||||||| &5' --------ATGCACACACTTA- 3'
Usp44mmu-miR-199a-3pbeg:1073end:1092pic:3' ATTGGTTACACGTCTGATGACA 5'& |||..|| || ||||||| &5' --ACCGGTG-GCTCACTACTG- 3'
Usp44mmu-miR-199bbeg:1073end:1092pic:3' ATTGGTTACACGTCTGATGACA 5'& |||..|| || ||||||| &5' --ACCGGTG-GCTCACTACTG- 3'
Usp44mmu-miR-26bstarbeg:725end:745pic:3' CTCGGTTCATTACC-TCTTGTCC 5'& | ||| .||| |||||||| &5' ----CTAGTTGTGGAAGAACAGG 3'
Usp44mmu-miR-138starbeg:333end:350pic:3' GGGACCACAACACTTCATCGGC 5'& |||| ||||||||| &5' -------GTTGGGAAGTAGCC- 3'
Usp44mmu-miR-378beg:416end:433pic:3' GGAAGACTGAGGTTCAGGTCA 5'& | |||||||| &5' ------GTATAATAGTCCAGT 3'
Usp44mmu-miR-466d-5pbeg:1156end:1175pic:3' GTACATGTACATGCGTGTGTGT 5'& ||| |.|||||||| &5' -----ACACAAATGCACACAC- 3'
Usp44mmu-miR-466kbeg:1158end:1175pic:3' AGTGTACATGTACATGTGTGTGT 5'& ||| |.||||||| &5' --------ACAAATGCACACAC- 3'
Usp44mmu-miR-320beg:821end:840pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& |||| ||| ||||||| &5' ---CCCT-TCACA-CAGCTTT- 3'
Usp44mghv-miR-M1-6beg:281end:294pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& . .||||||| &5' -----------GGGCAGTTTC- 3'
Usp44mmu-miR-3475beg:792end:809pic:3' AAGTTTGGTACACGGAGGTCT 5'& .|||| ||||||||| &5' --TAAAC----TGCCTCCAG- 3'
Usp44mmu-miR-1982starbeg:217end:234pic:3' GGAGGGGTCCTG--GGAGGGTT 5'& |||| |||||||. &5' --------GGACTTCCTCCCAG 3'
Usp44mmu-miR-450b-5pbeg:735end:752pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||| .||||||| &5' -------GAACAGGCTGCAAA- 3'
Usp44mmu-miR-709beg:787end:807pic:3' AGGAGGACGGA-GACGGAGG 5'& ||. |. |||||||| &5' --CTTG-GTAAACTGCCTCC 3'
Usp44mmu-miR-876-5pbeg:98end:115pic:3' ATCACTAAGTGTCT-CTTTAGGT 5'& || ..| ||||||| &5' -------TC-TGGTTGAAATCC- 3'
Usp44mmu-miR-22starbeg:726end:742pic:3' ATTTCGAACGGTGACTTCTTGA 5'& |. . ||||||| &5' --------GTTGTGGAAGAAC- 3'
Usp44mmu-miR-674starbeg:947end:966pic:3' AACAAGACTCTACC--CTCGACAC 5'& ||| || ||||||| &5' -----CTGTGAAAGAAGAGCTGT- 3'
Usp44mcmv-miR-M23-2beg:80end:100pic:3' GGCGAACTGGCTCCGGGGGTA 5'& |.| |.| |||||||| &5' CTGATTT-CTGT-GCCCCCAT 3'
Usp44mmu-miR-1971beg:318end:336pic:3' AGAGTCGGG-TCGGAAATG 5'& ||| |||||||| &5' ---CAGAGGGAGCCTTTA- 3'
Usp44mmu-miR-335-5pbeg:1026end:1042pic:3' TGTAAAAAGCAATAACGAGAACT 5'& |||| |||||||| &5' ---------GTTACTGCTCTTG- 3'
Usp44mmu-miR-1894-5pbeg:199end:210pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||||||| &5' -------------AGGGGAGA- 3'
Usp44mmu-miR-1197beg:39end:51pic:3' TCTTCATCTGGTACACAGGAT 5'& ||||||||. &5' ------------TGTGTCCTG 3'
Usp44mcmv-miR-m108-2-5p.2beg:488end:510pic:3' CACTG-GCGAGCGCTGCTCACT 5'& |||| ||. .|.| .| ||| &5' -TGACACGTGTGTG-TGTGTG- 3'
Usp44mcmv-miR-M23-2beg:787end:808pic:3' GGCGAACTGGCTC------CGGGGGTA 5'& |||. .| |||.||| &5' ------GACTTGGTAAACTGCCTCCA- 3'
Usp44mghv-miR-M1-3beg:466end:487pic:3' TTCGCGTTGAGGAC---GAGTGGAG 5'& |||||| ||||..| &5' ------AACTCCATACTCTCATTT- 3'
Usp44mghv-miR-M1-6beg:575end:597pic:3' TTTTGGTGGAGTG--TGTCAAAGT 5'& || . ||. .|||||||| &5' -----CAGTACATGAGCAGTTTCA 3'
Usp44mghv-miR-M1-6beg:414end:437pic:3' TTTTGGTGGAG-TGTGTCAAAGT 5'& || .|. . ||||||| &5' --AAGTATAATAGTCCAGTTTC- 3'
Usp44mmu-let-7abeg:1078end:1096pic:3' TTGATATGTTGGATGATGGAGT 5'& .| |||||.|||| &5' ------GCTCACTACTGCCTC- 3'
Usp44mmu-let-7abeg:785end:806pic:3' TTGATATGTTGGA-----TGATGGAGT 5'& .||.| |||.|||| &5' --------GACTTGGTAAACTGCCTC- 3'
Usp44mmu-let-7bbeg:1078end:1096pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .| |||||.|||| &5' ------GCTCACTACTGCCTC- 3'
Usp44mmu-let-7cbeg:1078end:1096pic:3' TTGGTATGTTGGATGATGGAGT 5'& .| |||||.|||| &5' ------GCTCACTACTGCCTC- 3'
Usp44mmu-let-7cbeg:785end:806pic:3' TTGGTATGTTGGA-----TGATGGAGT 5'& .||.| |||.|||| &5' --------GACTTGGTAAACTGCCTC- 3'
Usp44mmu-let-7dbeg:1075end:1096pic:3' TTGATACGTTG---GATGATGGAGA 5'& | .| |||||.||||| &5' ------GTGGCTCACTACTGCCTCT 3'
Usp44mmu-let-7dbeg:785end:806pic:3' TTGATACGTTGGATGATGGAGA 5'& .||| |.|| |||.|||| &5' GACTTGGTAA---ACTGCCTC- 3'
Usp44mmu-let-7fbeg:1078end:1096pic:3' TTGATATGTTAGATGATGGAGT 5'& .| |||||.|||| &5' ------GCTCACTACTGCCTC- 3'
Usp44mmu-let-7gbeg:1075end:1096pic:3' TTGACA-TGTTTGATGATGGAGT 5'& || .| ||||||.|||| &5' ----GTGGCTCACTACTGCCTC- 3'
Usp44mmu-let-7ibeg:1075end:1096pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .. || | ||||||.|||| &5' GGTGGCTC--ACTACTGCCTC- 3'
Usp44mmu-let-7ibeg:790end:806pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .|.| |||.|||| &5' ---GGTAA-----ACTGCCTC- 3'
Usp44mmu-miR-105beg:1129end:1150pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& ..|||.||.||| |||||| &5' -TTACAGGCGTCT--GCACTT-- 3'
Usp44mmu-miR-1186bbeg:1047end:1066pic:3' CACCACGTACGGAAATTAGGGT 5'& ||| |. || ..||||| &5' -TGGAGTTTG-----GGTCCCA 3'
Usp44mmu-miR-122beg:1081end:1103pic:3' GTTTGTGGTAAC--AGTGTGAGGT 5'& |||.| || || .|||||| &5' ----CACTACTGCCTC-TACTCCA 3'
Usp44mmu-miR-1274abeg:774end:795pic:3' ACCGCGGACTTGTC-CCTGGACT 5'& .|||| ||| ||||.||. &5' -----TCTGACCAGTGGACTTGG 3'
Usp44mmu-miR-128beg:25end:46pic:3' TTTCTCTGGCCA--AGTGACACT 5'& |||| |.|||||| &5' ----AGACATAATGTTACTGTG- 3'
Usp44mmu-miR-129-3pbeg:201end:220pic:3' TACGAAAAACCCCA-----TTCCCGAA 5'& |||| .|||||| &5' ---------GGGGAGACAGGAGGGCT- 3'
Usp44mmu-miR-129-3pbeg:850end:871pic:3' TACGAAAAACCCCATTCCCGAA 5'& ||| || |||||||| &5' --GCTGC--GGCAGAAGGGCTT 3'
Usp44mmu-miR-130abeg:1123end:1149pic:3' TACGGGAAAA--TTGTA-ACGTGAC 5'& |||.|||| ..|.| |||||| &5' -TGCTCTTTACAGGCGTCTGCACT- 3'
Usp44mmu-miR-130bstarbeg:233end:254pic:3' TCATCACGTTGTCCCTTTCTCA 5'& || | .| .||||.||||| &5' ---AG-GGGAGGGGGAGAGAGT 3'
Usp44mmu-miR-132beg:385end:414pic:3' GCTGGTACCGACATC-------TGACAAT 5'& |.|| |.|||. .|||||| &5' ---CTATTGTTGTGCCCTTAAAGCTGTTA 3'
Usp44mmu-miR-142-3pbeg:368end:387pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |||.||| ||.|||.| &5' ---ATAGAGTT---AATACTGC- 3'
Usp44mmu-miR-145beg:263end:288pic:3' TCCCTAAG-GACCCTTTTGACCTG 5'& |||||||. ||||| . ||.| &5' AGGGATTTGCTGGGGGGG--GGGC 3'
Usp44mmu-miR-145beg:1035end:1054pic:3' TCCCTAAGGACC-CTTTTGACCTG 5'& ||.|| ||..|||||| &5' ------TCTTGCAGAGGACTGGA- 3'
Usp44mmu-miR-145beg:202end:224pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& .|||| | |||...|||||| &5' GGGGAGACA--GGAGGGCTGGAC 3'
Usp44mmu-miR-146bstarbeg:927end:944pic:3' TGGTCTTGACTCAGGGATCCCG 5'& ||| | |.||||| &5' -------CTGTGGTCTTAGGG- 3'
Usp44mmu-miR-150beg:440end:451pic:3' GTGACCATGTTCCCAACCCTCT 5'& |||||||| &5' --------------TTGGGAGA 3'
Usp44mmu-miR-1894-5pbeg:229end:251pic:3' TCTCCGTCCACCATCCCCTCTC 5'& || |||| || .|||||||| &5' --AGCCAGG-GGAGGGGGAGAG 3'
Usp44mmu-miR-1894-5pbeg:283end:306pic:3' TCTCCGTCC----ACCATCCCCTCTC 5'& .||||| |||| ||||||| &5' --GGGCAGTTTCCTGGT-GGGGAGA- 3'
Usp44mmu-miR-1898beg:969end:989pic:3' CTAGGGGACA-CTTGGAACTGGA 5'& |||. |..|||||||| &5' ---CCCTCAAAGGGCCTTGACC- 3'
Usp44mmu-miR-18astarbeg:8end:29pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& ||| || ||||.|| &5' CAGCCATTCT-CTGAGGGTAG- 3'
Usp44mmu-miR-1904beg:305end:326pic:3' GGAGGGA--GGTCTCCTCGTCTTG 5'& || || ||||||||. &5' ---CCATGACCT--GGAGCAGAG- 3'
Usp44mmu-miR-1904beg:1030end:1054pic:3' GGA-GGGAG-GTCTCCTCGTCTTG 5'& || |.||. ||||||| .||. &5' -CTGCTCTTGCAGAGGACTGGAG- 3'
Usp44mmu-miR-1927beg:1095end:1114pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& |.| |.| |||.||| &5' -----CTCCAGCCA-CAGGGGT- 3'
Usp44mmu-miR-1931beg:1023end:1044pic:3' CGGTAGC-GTGGTCGGGAACGTA 5'& .| | .||. ||.|||||| &5' ---GTGGTTACT-GCTCTTGCA- 3'
Usp44mmu-miR-1952beg:232end:250pic:3' GTCTTCCTCCCACCTCT 5'& ||| .|||||| ||||| &5' CAG-GGGAGGG-GGAGA 3'
Usp44mmu-miR-1953beg:822end:843pic:3' GTCTTCGGACTC---TTGAAAGGGT 5'& ||| |.||||||. &5' ------CCTTCACACAGCTTTCCT- 3'
Usp44mmu-miR-1958beg:823end:843pic:3' TGAATGACGAAGG----TGAAAGGAT 5'& |||| .||||||| &5' --------CTTCACACAGCTTTCCT- 3'
Usp44mmu-miR-1959beg:590end:608pic:3' GAGGTGACTCGATGTAGGGG 5'& |.|| .|| ||||||. &5' -TTCA---GGCAACATCCT- 3'
Usp44mmu-miR-1961beg:1079end:1096pic:3' AAGATTGATGATGGAGT 5'& || ||||||.|||| &5' --CTCACTACTGCCTC- 3'
Usp44mmu-miR-1961beg:795end:806pic:3' AAGATTGATGATGGAGT 5'& |||.|||| &5' --------ACTGCCTC- 3'
Usp44mmu-miR-1968beg:824end:858pic:3' TCAGGTG-GT----AGGAATT-----GTCGACGT 5'& |.||| || ||||| .|||||| &5' --TTCACACAGCTTTCCTTTGTATTTTAGCTGC- 3'
Usp44mmu-miR-1969beg:749end:765pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& ||| .||||||| &5' --CCAGA-------TTCCATCT- 3'
Usp44mmu-miR-196abeg:785end:805pic:3' GGGTTGTTGTA-C-TTTGATGGAT 5'& .|| | |||||.||| &5' ------GACTTGGTAAACTGCCT- 3'
Usp44mmu-miR-196bbeg:785end:805pic:3' GGGTTGTTGT-CC-TTTGATGGAT 5'& .|| || |||||.||| &5' ------GACTTGGTAAACTGCCT- 3'
Usp44mmu-miR-204beg:314end:330pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||| .||.|||||. &5' -------GGA--GCAGAGGGAG 3'
Usp44mmu-miR-206beg:826end:853pic:3' GGTGTGT--GAAGGAATG-TAAGGT 5'& |||||| .|||||| |||..| &5' -CACACAGCTTTCCTTTGTATTTTA 3'
Usp44mmu-miR-211beg:314end:330pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||| .||.|||||. &5' -------GGA--GCAGAGGGAG 3'
Usp44mmu-miR-2140beg:1132end:1150pic:3' TGGTGGTTC-TAGACGTGGA 5'& ||.| .|||||||.| &5' -----CAGGCGTCTGCACTT 3'
Usp44mmu-miR-27abeg:938end:955pic:3' CGCCTTGAATCGGTGACACTT 5'& ||.. || ||||||| &5' --GGGGA----CC-CTGTGAA 3'
Usp44mmu-miR-27bbeg:934end:955pic:3' CGTCTTGAATC----GGTGACACTT 5'& ||||| || ||||||| &5' ------CTTAGGGGACC-CTGTGAA 3'
Usp44mmu-miR-28starbeg:89end:107pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& || | ||. ||||.|| &5' ----GCCCC-CAT-ATCTGGT- 3'
Usp44mmu-miR-291b-3pbeg:1131end:1150pic:3' TGTTTGTTTTACCTACGTGAAA 5'& |||..|. ||||||| &5' ACAGGCGTC-----TGCACTT- 3'
Usp44mmu-miR-297astarbeg:499end:524pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-297astarbeg:511end:536pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-297b-3pbeg:499end:524pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-297b-3pbeg:511end:536pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-297cstarbeg:499end:524pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-297cstarbeg:511end:536pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-299beg:88end:102pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& |.|| ||||.|| &5' --------TGCC--CCCATAT- 3'
Usp44mmu-miR-300beg:831end:849pic:3' CTTCTCTCGAACGGGAACGTAT 5'& ||||| ||.|||.|| &5' ------AGCTTTCCTTTGTAT- 3'
Usp44mmu-miR-301bbeg:685end:707pic:3' CGAAACTGTTAT--GGTAACGTGAC 5'& | .| || |||.|.|| &5' ------ATGGTTTTCCTTTGTATTG 3'
Usp44mmu-miR-302abeg:1129end:1151pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& |.|| ..|.| ||||||| &5' TTACA--GGCGTCT--GCACTTA 3'
Usp44mmu-miR-302bbeg:1130end:1151pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||| |..|.| ||||||| &5' -TAC--AGGCGTCT--GCACTTA 3'
Usp44mmu-miR-302cbeg:127end:148pic:3' GGTGACTTTGTACCTTCGTGAA 5'& || || .| |||||||.| &5' -CAATGTTGC--GGAAGCATT- 3'
Usp44mmu-miR-302dbeg:1132end:1151pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& ||..|.| ||||||| &5' -----CAGGCGTCT--GCACTTA 3'
Usp44mmu-miR-3072beg:271end:289pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& ||| ||.||||||| &5' -----GCTGG--GGGGGGGGCA 3'
Usp44mmu-miR-30astarbeg:182end:202pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||| || .|||||||| &5' -CTGAT--CAA-TGACTGAAA- 3'
Usp44mmu-miR-30astarbeg:551end:570pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |.||| |. |||||.|| &5' GTTGCT-AT-----ACTGAGAG 3'
Usp44mmu-miR-30astarbeg:1032end:1055pic:3' CGACGTT--TGTAGGCTGACTTTC 5'& |||| .|| |||||.|. &5' -CTGCTCTTGCAGAGGACTGGAG- 3'
Usp44mmu-miR-30bstarbeg:588end:609pic:3' CTGCATTTGTAGG-TGTAGGGTC 5'& || || ||||||.| &5' ---GTTT-CAGGCAACATCCTA- 3'
Usp44mmu-miR-30estarbeg:551end:570pic:3' CGACATTTGTAGGCTGACTTTC 5'& || .| |||||.|| &5' ---GTT-GCTAT--ACTGAGAG 3'
Usp44mmu-miR-30estarbeg:1044end:1055pic:3' CGACATTTGTAGGCTGACTTTC 5'& |||||.|. &5' -------------GACTGGAG- 3'
Usp44mmu-miR-30estarbeg:182end:202pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||| || .|||||||| &5' -CTGAT--CAA-TGACTGAAA- 3'
Usp44mmu-miR-331-5pbeg:84end:106pic:3' CCTAGGGACCCTGGTATGGATC 5'& ||. || |||||.||.| &5' ---TCTGTGCCCCCATATCTGG 3'
Usp44mmu-miR-33starbeg:129end:149pic:3' CACTACGTGACACCTTTGTAAC 5'& |||. || ||||.||||| &5' ---ATGT--TGCGGAAGCATTG 3'
Usp44mmu-miR-343beg:230end:248pic:3' AGACCCGTGTA-CTTCCCTCT 5'& || || |.||||.|| &5' -----GC-CAGGGGAGGGGGA 3'
Usp44mmu-miR-3470bbeg:236end:256pic:3' GGTCGGACCAGATGTCTCACT 5'& .| || | ||||||| &5' --GGAG-GGGG-AGAGAGTGA 3'
Usp44mmu-miR-34abeg:1077end:1094pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||| .|||||| &5' ------GGCTCAC-TACTGCC- 3'
Usp44mmu-miR-34abeg:367end:388pic:3' TGTTGG-TCGATTCTGTGACGGT 5'& .|. ||.|| |.|||||| &5' --GATAGAGTTA--ATACTGCC- 3'
Usp44mmu-miR-34b-5pbeg:1077end:1095pic:3' TGTTAGTCGATTAATGTGACGGA 5'& .||| .||||||| &5' ------GGCTCAC--TACTGCCT 3'
Usp44mmu-miR-34b-5pbeg:372end:388pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||.|| |.|||||| &5' ------AGTTA---ATACTGCC- 3'
Usp44mmu-miR-34cbeg:1115end:1130pic:3' CGTTAGTCGATTGATGTGACGGA 5'& .|| ||||||. &5' ----------GACACCACTGCT- 3'
Usp44mmu-miR-34cbeg:372end:388pic:3' CGTTAGTCGATTGATGTGACGGA 5'& ||.|| |.|||||| &5' ------AGTTA---ATACTGCC- 3'
Usp44mmu-miR-376bbeg:938end:954pic:3' TTCACCTACAAGGAGATACTA 5'& ||. || ||.||| &5' ----GGGGA--CC-CTGTGA- 3'
Usp44mmu-miR-376cbeg:907end:926pic:3' TGCAC-TTTAAAGGAGATACAA 5'& ||| |||| |||.|||| &5' --GTGTAAATA---TCTGTGTT 3'
Usp44mmu-miR-380-3pbeg:34end:55pic:3' TTCTACACCTGGTAT--GATGTAT 5'& |||| ||..|. ||.|||| &5' ---ATGTT-ACTGTGTCCTGCATA 3'
Usp44mmu-miR-381beg:831end:849pic:3' TGTCTCTCGAACGGGAACATAT 5'& ||||| ||.|||||| &5' ------AGCTTTCCTTTGTAT- 3'
Usp44mmu-miR-381beg:687end:705pic:3' TGTCTCTCGAACGGGAACATAT 5'& .|.|| ||.|||||| &5' ------GGTTTTCCTTTGTAT- 3'
Usp44mmu-miR-431starbeg:937end:965pic:3' TCTTC-GGGACG--TTCTGCTGGAC 5'& ||..| |||||. |||| || ||| &5' AGGGGACCCTGTGAAAGAAGAGCTG 3'
Usp44mmu-miR-449abeg:1073end:1094pic:3' TGGTCGATTGTTATGTGACGGT 5'& |||.| |..| .|||||| &5' ACCGG-TGGCTCACTACTGCC- 3'
Usp44mmu-miR-449abeg:372end:388pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||.|| |.|||||| &5' ---AGTTA-----ATACTGCC- 3'
Usp44mmu-miR-449bbeg:1073end:1095pic:3' CGGTCGATT-GTTGTGACGGA 5'& ||.|. || .||||||| &5' -CCGGTGGCTCACTACTGCCT 3'
Usp44mmu-miR-449bbeg:1115end:1130pic:3' CGGTCGATTGTTGTGACGGA 5'& .||| ||||||. &5' -------GACACCACTGCT- 3'
Usp44mmu-miR-449cbeg:1073end:1095pic:3' GGTCGATCGTTACGTGACGGA 5'& ||.| |.|| .||||||| &5' CCGG-TGGCTCACTACTGCCT 3'
Usp44mmu-miR-449cbeg:372end:388pic:3' GGTCGATCGTTACGTGACGGA 5'& ||. .|||||| &5' ------AGTTAA-TACTGCC- 3'
Usp44mmu-miR-450a-3pbeg:136end:158pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |.| ||| || |||||||| &5' --GGAAGCATTGC-TCCCCAAT 3'
Usp44mmu-miR-464beg:774end:797pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& ||| || |.|..|||||||| &5' --TCTGACC-AGTGGACTTGGTA 3'
Usp44mmu-miR-465a-3pbeg:174end:191pic:3' AGATGAATCTTTCC-GGGACTAG 5'& |||| |.|||||| &5' ---------AAAGCTCTCTGATC 3'
Usp44mmu-miR-465b-3pbeg:174end:191pic:3' AGATGAATCTTTCC-GGGACTAG 5'& |||| |.|||||| &5' ---------AAAGCTCTCTGATC 3'
Usp44mmu-miR-465c-3pbeg:174end:191pic:3' AGATGAATCTTTCC-GGGACTAG 5'& |||| |.|||||| &5' ---------AAAGCTCTCTGATC 3'
Usp44mmu-miR-466a-3pbeg:499end:522pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466a-3pbeg:511end:534pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466b-3-3pbeg:499end:521pic:3' AGAATACACACGCACATACATAA 5'& |.||||||.||||.|||.| &5' ---TGTGTGTGTGTGTGTGTGT- 3'
Usp44mmu-miR-466b-3-3pbeg:517end:540pic:3' AGAATACACACGCACATACATAA 5'& |.||||||.||||.|||.|| &5' ---TGTGTGTGTGTGTGTGTGTT 3'
Usp44mmu-miR-466b-3pbeg:497end:520pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466b-3pbeg:509end:532pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466c-3pbeg:497end:520pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466c-3pbeg:509end:532pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466d-3pbeg:499end:522pic:3' GATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' -TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466d-3pbeg:511end:534pic:3' GATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' -TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466e-3pbeg:499end:522pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466e-3pbeg:511end:534pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466f-3pbeg:498end:522pic:3' CACACATACACACACACATAC 5'& ||||||.|||||||||||.|| &5' GTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466f-3pbeg:510end:534pic:3' CACACATACACACACACATAC 5'& ||||||.|||||||||||.|| &5' GTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-466gbeg:499end:523pic:3' ACACACACGTACACAGACATA 5'& ||||||||..||||| |||.| &5' TGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-466gbeg:511end:535pic:3' ACACACACGTACACAGACATA 5'& ||||||||..||||| |||.| &5' TGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-466hbeg:1155end:1174pic:3' ATGTGTGTTCGTGTACGTGTGT 5'& ||||||| ||||||||| &5' --CACACAA----ATGCACACA 3'
Usp44mmu-miR-466ibeg:498end:521pic:3' ATCACACATACACACACACATA 5'& ||||||.|||||||||||.| &5' --GTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-466ibeg:510end:533pic:3' ATCACACATACACACACACATA 5'& ||||||.|||||||||||.| &5' --GTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-466ibeg:516end:539pic:3' ATCACACATACACACACACATA 5'& ||||||.|||||||||||.| &5' --GTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-466jbeg:1155end:1174pic:3' AATGTGTGTACGTGTACGTGTGT 5'& |||||| ||||||||| &5' ---CACACAA----ATGCACACA 3'
Usp44mmu-miR-467abeg:1130end:1151pic:3' GCGTATATGTACGTC--CGTGAAT 5'& |||| ||. ||||||| &5' ------TACAGGCGTCTGCACTTA 3'
Usp44mmu-miR-467a-1starbeg:498end:523pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467a-1starbeg:510end:535pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467bbeg:1130end:1152pic:3' GTATATGTACGTC--CGTGAATG 5'& |||| ||. |||||||| &5' ----TACAGGCGTCTGCACTTAC 3'
Usp44mmu-miR-467bstarbeg:498end:525pic:3' CACA-AC-CACACACATACATATA 5'& |||| || ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467bstarbeg:510end:537pic:3' CACA-AC-CACACACATACATATA 5'& |||| || ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467cbeg:1130end:1151pic:3' GTGTATATGTACGT--GCGTGAAT 5'& |||| ||. .||||||| &5' ------TACAGGCGTCTGCACTTA 3'
Usp44mmu-miR-467dstarbeg:498end:523pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467dstarbeg:510end:535pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467fbeg:497end:521pic:3' ACATCCACACACACACATATA 5'& |||. ||||||||||||.|.| &5' TGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-467fbeg:509end:533pic:3' ACATCCACACACACACATATA 5'& |||. ||||||||||||.|.| &5' TGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-470starbeg:689end:709pic:3' AGAAGAGTCTTTCCATGACCAA 5'& ||.|| |||.|||| &5' --TTTTCCTTT--GTATTGGT- 3'
Usp44mmu-miR-509-5pbeg:1036end:1056pic:3' TACTAACGGTGTAAGACCTCAT 5'& |||| . ||||||| &5' ----TTGCAGAGGACTGGAGT- 3'
Usp44mmu-miR-540-3pbeg:763end:784pic:3' GGTCCTAGCTGGAGACTGGA 5'& || .| | ||||||||| &5' -CACAGTGGTCCTCTGACC- 3'
Usp44mmu-miR-544beg:1025end:1046pic:3' CTCGA--ACGATTTTTACGTCTTA 5'& .|.| |||| ||||||. &5' -GGTTACTGCTCT---TGCAGAG- 3'
Usp44mmu-miR-546beg:1143end:1160pic:3' CTGAGGCACGGTGGTA 5'& |||. |||||| &5' -ACTTACATCCACCA- 3'
Usp44mmu-miR-574-3pbeg:499end:524pic:3' ACACCCACACACGTACTCGCAC 5'& |||| |||||||..|| |.||| &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-574-3pbeg:511end:536pic:3' ACACCCACACACGTACTCGCAC 5'& |||| |||||||..|| |.||| &5' TGTGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-574-5pbeg:1155end:1178pic:3' TGTGTGAGTGTGTGTGTGTGAGT 5'& ||||| |..||||||||.| &5' -CACACAA--ATGCACACACTTA 3'
Usp44mmu-miR-615-5pbeg:931end:950pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& |.||. ||||||||. &5' GGTCTTA-----GGGGACCCT- 3'
Usp44mmu-miR-665beg:278end:299pic:3' TCCCTGGAGTCGGAGGACCA 5'& .|||. |||..||||||| &5' GGGGGGG-CAGTTTCCTGGT 3'
Usp44mmu-miR-669fbeg:492end:516pic:3' TATGCACACACACATACATATAC 5'& ||||||||||||.|||.|.|| &5' --ACGTGTGTGTGTGTGTGTGTG 3'
Usp44mmu-miR-669lbeg:826end:838pic:3' TGTATATGTACGTGTGTGTTGA 5'& ||||||.|| &5' -------------CACACAGCT 3'
Usp44mmu-miR-669mbeg:498end:523pic:3' TATACAAACACACCTACATATA 5'& .|.||| |||||| |||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-669mbeg:510end:535pic:3' TATACAAACACACCTACATATA 5'& .|.||| |||||| |||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3'
Usp44mmu-miR-686beg:328end:347pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& |||.| .|||||||.|. &5' -CTTTAG---TTGGGAAGTAG- 3'
Usp44mmu-miR-692beg:237end:260pic:3' CTCACTCCGCGAGT-TTCTCTA 5'& ||| |.|| | .||||| &5' GAG-GGGGAGAGAGTGAGAGA- 3'
Usp44mmu-miR-693-3pbeg:5end:28pic:3' AATGTCGGTGT-AGACTTTCGACG 5'& ||||||||. |||||..|. &5' -TACAGCCATTCTCTGAGGGT--- 3'
Usp44mmu-miR-696beg:1154end:1173pic:3' GGGTGTCGTT--CGTGTGCG 5'& ||||| ||| |||||| &5' -CCACA-CAAATGCACAC-- 3'
Usp44mmu-miR-698beg:233end:255pic:3' TCCCTTCCTTTGCTCTTAC 5'& ||||.||| . ||||.|| &5' AGGGGAGGGGGAGAGAGTG 3'
Usp44mmu-miR-708starbeg:322end:340pic:3' GATCTTCGAGTGTCAGATCAAC 5'& .|.||| | |.|||||| &5' --GGGAGC-C----TTTAGTTG 3'
Usp44mmu-miR-708starbeg:89end:109pic:3' GATCTTCGA--GTGTCAGATCAAC 5'& || ||.| |||.|||| &5' ------GCCCCCATA-TCTGGTTG 3'
Usp44mmu-miR-710beg:773end:795pic:3' GAGTTGAGAGGGGT--TCTGAACC 5'& |||| ||| .||||||| &5' -----CTCTGACCAGTGGACTTGG 3'
Usp44mmu-miR-742beg:678end:697pic:3' AAATGGGTCGTACCACCGAAAG 5'& |.|| |||.|||| &5' ---ATCCTAAA---TGGTTTTC 3'
Usp44mmu-miR-744beg:33end:53pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||||| |. | |.||.||| &5' ---TGTTA-CTGT-GTCCTGCA 3'
Usp44mmu-miR-744starbeg:582end:604pic:3' TCCAACTC--CAATCACCGTTGTC 5'& |||| ||| ||||||| &5' ----TGAGCAGTTTCAGGCAACA- 3'
Usp44mmu-miR-770-3pbeg:1060end:1087pic:3' GGTCGA-GGTGCAGT--CCGGGTGC 5'& ||||| |||| |||.||| &5' CCAGCACCCACACCGGTGGCTCAC- 3'
Usp44mmu-miR-7abeg:910end:931pic:3' TGTTGTTTTAGTGAT-CAGAAGGT 5'& .||| ||. ||.|||| &5' ----TAAATAT-CTGTGTTTTCC- 3'
Usp44mmu-miR-7abeg:706end:727pic:3' TGTTGTTTTAGTGA------TCAGAAGGT 5'& .||||| |||.|||| &5' --------GTCACTTCTGTAAGTTTTCC- 3'
Usp44mmu-miR-7bbeg:910end:931pic:3' TGTTGTTT-TAGTGTTCAGAAGGT 5'& .||| ||| ||.|||| &5' ----TAAATATCTGT-GTTTTCC- 3'
Usp44mmu-miR-7bbeg:714end:727pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .||||.|||| &5' ------------TAAGTTTTCC- 3'
Usp44mmu-miR-802beg:21end:44pic:3' TTCCTA-CTTAGAAACAATGACT 5'& .|||.| || |||||||| &5' GAGGGTAGACATAATGTTACTG- 3'
Usp44mmu-miR-879beg:313end:335pic:3' CCGAATCTCGATA--TTCGGAGA 5'& |.|||| .|||||.| &5' ----TGGAGCAGAGGGAGCCTTT 3'
Usp44mmu-miR-881beg:750end:772pic:3' AGATAAGTCTTTTC----TGTGTCAA 5'& |||| ||||||| &5' ------CAGATTCCATCTACACAGT- 3'
Usp44mmu-miR-98beg:1075end:1096pic:3' TTGTTATGTTGA---ATGATGGAGT 5'& . .|| ||||.|||| &5' ------GTGGCTCACTACTGCCTC- 3'
Usp44mmu-miR-98beg:785end:806pic:3' TTGTTATGTTGAA-----TGATGGAGT 5'& .|||| |||.|||| &5' --------GACTTGGTAAACTGCCTC- 3'
Usp44mmu-miR-488starbeg:87end:106pic:3' AACTCTCACGATA--ATAGACCC 5'& |||| ||||||| &5' ------GTGCCCCCATATCTGG- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Usp44RAID00006845mmu-miR-6986-5pmiRNAMIMAT0027874Usp44mRNA327799Prediction0.1828
Usp44RAID00038168mmu-miR-466n-5pmiRNAMIMAT0014893Usp44mRNA327799Prediction0.1828
Usp44RAID00061205mmu-miR-30fmiRNAMIMAT0025179Usp44mRNA327799Prediction0.1828
Usp44RAID00108887mmu-miR-5127miRNAMIMAT0020638Usp44mRNA327799Prediction0.1828
Usp44RAID00427433mmu-miR-383-5pmiRNAMIMAT0000748Usp44mRNA327799Prediction0.1828
Usp44RAID00501974mmu-miR-7069-5pmiRNAMIMAT0028044Usp44mRNA327799Prediction0.1828
Usp44RAID00553208mmu-miR-6934-3pmiRNAMIMAT0027769Usp44mRNA327799Prediction0.1828
Usp44RAID00711554mmu-miR-130b-3pmiRNAMIMAT0000387Usp44mRNA327799Prediction0.1828
Usp44RAID00800382mmu-miR-30c-5pmiRNAMIMAT0000514Usp44mRNA327799Prediction0.1828
Usp44RAID00875081mmu-miR-7119-3pmiRNAMIMAT0028136Usp44mRNA327799Prediction0.1828
Usp44RAID00924976mmu-miR-669nmiRNAMIMAT0009427Usp44mRNA327799Prediction0.1828
Usp44RAID01110015mmu-miR-10a-5pmiRNAMIMAT0000648Usp44mRNA327799Prediction0.1828
Usp44RAID01141332mmu-miR-30b-5pmiRNAMIMAT0000130Usp44mRNA327799Prediction0.1828
Usp44RAID01485488mmu-miR-669m-5pmiRNAMIMAT0017346Usp44mRNA327799Prediction0.1828
Usp44RAID01534239mmu-miR-378a-3pmiRNAMIMAT0003151Usp44mRNA327799Prediction0.1828
Usp44RAID01812437mmu-miR-466jmiRNAMIMAT0005848Usp44mRNA327799Prediction0.1828
Usp44RAID01960066mmu-miR-150-5pmiRNAMIMAT0000160Usp44mRNA327799Prediction0.2202
Usp44RAID01967725mmu-miR-466h-5pmiRNAMIMAT0004884Usp44mRNA327799Prediction0.1828
Usp44RAID01977810mmu-miR-320-3pmiRNAMIMAT0000666Usp44mRNA327799Prediction0.2202
Usp44RAID01983064mmu-miR-23a-3pmiRNAMIMAT0000532Usp44mRNA327799Prediction0.1828
Usp44RAID02063704mmu-miR-10b-5pmiRNAMIMAT0000208Usp44mRNA327799Prediction0.1828
Usp44RAID02187987mmu-miR-31-5pmiRNAMIMAT0000538Usp44mRNA327799Prediction0.1828
Usp44RAID02275816mmu-miR-7038-3pmiRNAMIMAT0027981Usp44mRNA327799Prediction0.1828
Usp44RAID02317825mmu-miR-185-5pmiRNAMIMAT0000214Usp44mRNA327799Prediction0.1828
Usp44RAID02547174mmu-miR-6237miRNAMIMAT0024858Usp44mRNA327799Prediction0.1828
Usp44RAID02551911mmu-miR-382-5pmiRNAMIMAT0000747Usp44mRNA327799Prediction0.1828
Usp44RAID02567579mmu-miR-335-5pmiRNAMIMAT0000766Usp44mRNA327799Prediction0.1828
Usp44RAID02697256mmu-miR-130a-3pmiRNAMIMAT0000141Usp44mRNA327799Prediction0.1828
Usp44RAID02702719mmu-miR-876-5pmiRNAMIMAT0004854Usp44mRNA327799Prediction0.1828
Usp44RAID02778771mmu-miR-466m-5pmiRNAMIMAT0014882Usp44mRNA327799Prediction0.1828
Usp44RAID02802000mmu-miR-760-5pmiRNAMIMAT0017245Usp44mRNA327799Prediction0.1828
Usp44RAID02897390mmu-miR-8093miRNAMIMAT0031394Usp44mRNA327799Prediction0.1828
Usp44RAID02987190mmu-miR-28bmiRNAMIMAT0019354Usp44mRNA327799Prediction0.1828
Usp44RAID02991313mmu-miR-23b-3pmiRNAMIMAT0000125Usp44mRNA327799Prediction0.1828
Usp44RAID03027970mmu-miR-466i-5pmiRNAMIMAT0017325Usp44mRNA327799Prediction0.1828
Usp44RAID03578566mmu-miR-7652-5pmiRNAMIMAT0029810Usp44mRNA327799Prediction0.1828
Usp44RAID03636781mmu-miR-212-3pmiRNAMIMAT0000659Usp44mRNA327799Prediction0.1828
Usp44RAID03679894mmu-miR-669c-3pmiRNAMIMAT0017253Usp44mRNA327799Prediction0.1828
Usp44RAID03988496mmu-miR-664-5pmiRNAMIMAT0017353Usp44mRNA327799Prediction0.1828
Usp44RAID04042919mmu-miR-28cmiRNAMIMAT0019339Usp44mRNA327799Prediction0.1828