DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Socs2 | mmu-miR-692 | beg:73 | end:91 | pic:3' CTCACTCCGCGAG----TTTCTCTA 5'& ||| ||||||| &5' ---------GCTATGTGAAAGAGA- 3' |
Socs2 | mmu-miR-511 | beg:313 | end:324 | pic:3' ACTCACGTCTCGTTTTCCGTA 5'& .||||||| &5' ------------GAAAGGCA- 3' |
Socs2 | mmu-miR-193star | beg:443 | end:456 | pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& | |||||||| &5' -----------GGAAAGACCC- 3' |
Socs2 | mmu-miR-20astar | beg:62 | end:77 | pic:3' GAAATTCACGAGCATTACGTCA 5'& ||| ||||||| &5' ---------CTCCGAATGCAG- 3' |
Socs2 | mmu-miR-101astar | beg:99 | end:118 | pic:3' CGTAGTCGTGACACTATTGACT 5'& | | ||| |||||||| &5' ----CTCCTCTG-GATAACTG- 3' |
Socs2 | mmu-miR-1928 | beg:160 | end:180 | pic:3' CTCGACCG-----TTACATCGA 5'& ||. .|||||||| &5' -----GGTGTGAAGATGTAGCT 3' |
Socs2 | mmu-miR-222 | beg:160 | end:180 | pic:3' TGGGTCATCGGTCTACATCGA 5'& .||. |||||||||| &5' ----GGTGTGAAGATGTAGCT 3' |
Socs2 | mmu-miR-208a | beg:580 | end:593 | pic:3' TGTTCGAAAAACGAGCAGAATA 5'& |||||||||| &5' ------------CTCGTCTTAT 3' |
Socs2 | mmu-miR-208b | beg:581 | end:593 | pic:3' TGTTTGGAAAACAAGCAGAATA 5'& ||||||||| &5' -------------TCGTCTTAT 3' |
Socs2 | mmu-miR-1958 | beg:218 | end:235 | pic:3' TGAATGACGAAGGTGAAAGGAT 5'& |||||. |||||||| &5' ------TGCTTT--CTTTCCTA 3' |
Socs2 | mmu-miR-130bstar | beg:71 | end:90 | pic:3' TCATCACGTTGT--CCCTTTCTCA 5'& ||||.| | ||||||| &5' -----TGCAGCTATGTGAAAGAG- 3' |
Socs2 | mmu-miR-2183 | beg:483 | end:502 | pic:3' TCCTCCAGTCCCCAAGTT 5'& || | | ||||||||. &5' --GACGCCTGGGGTTCAG 3' |
Socs2 | mcmv-miR-m88-1 | beg:463 | end:485 | pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& ||.|..| .| || |||||| &5' AGGCTTCAGC-TCCACTTCT- 3' |
Socs2 | mghv-miR-M1-5 | beg:458 | end:478 | pic:3' CTCTGCTGGG-CTAGAGTTGAGA 5'& ||||| | .|||.||| &5' -----GACCCAGGCTTCAGCTC- 3' |
Socs2 | mmu-let-7a | beg:42 | end:68 | pic:3' TTGATATGT-TGGA-------TGATGGAGT 5'& ||| .||| ||||.||| &5' ------ACATGCCTCATATAGACTATCTC- 3' |
Socs2 | mmu-let-7b | beg:40 | end:68 | pic:3' TTGGTGTGT-TGGA-------TGATGGAGT 5'& ||||| .||| ||||.||| &5' ----ACACATGCCTCATATAGACTATCTC- 3' |
Socs2 | mmu-let-7c | beg:39 | end:68 | pic:3' TTG-GTATGTTGGA----TGATGGAGT 5'& ||| |||.| | ||||.||| &5' AACACATGCCTCATATAGACTATCTC- 3' |
Socs2 | mmu-let-7e | beg:42 | end:68 | pic:3' TTGATATGT-TGGAG-------GATGGAGT 5'& ||| .|||| |||.||| &5' ------ACATGCCTCATATAGACTATCTC- 3' |
Socs2 | mmu-let-7i | beg:42 | end:68 | pic:3' TTGT-CGT-GTTTGA-TGATGGAGT 5'& ||| || || ||||.||| &5' -ACATGCCTCATATAGACTATCTC- 3' |
Socs2 | mmu-miR-1190 | beg:199 | end:217 | pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& || |. |.|||||| &5' -------GGTAGTTTTAGCTGA 3' |
Socs2 | mmu-miR-1199 | beg:134 | end:152 | pic:3' GGCGCGCTGGC--CCTGAGTCT 5'& ||| ||.||||| &5' ------GACAGTTGGGCTCAG- 3' |
Socs2 | mmu-miR-127star | beg:188 | end:213 | pic:3' TAGTCTC-GGGAGA-C-TCGAAGTC 5'& || ||||. | ||.||.|| &5' ---AGTTCCCCTTAGGTAGTTTTAG 3' |
Socs2 | mmu-miR-134 | beg:99 | end:122 | pic:3' GGGGAGACCAGTTGGTCAGTGT 5'& |.||||||| .|||. |.|| &5' CTCCTCTGGATAACTG--CGCA 3' |
Socs2 | mmu-miR-145star | beg:409 | end:432 | pic:3' GTTCTTGTCA-TAAAGGTCCTTA 5'& || .| ||||||||||. &5' -AAAGGCTTCCATTTCCAGGAG- 3' |
Socs2 | mmu-miR-146bstar | beg:480 | end:498 | pic:3' TGGTCTTGACTCAGGGATCCCG 5'& |.|| || |||.|||. &5' -CTAG-ACG-----CCTGGGGT 3' |
Socs2 | mmu-miR-148a | beg:360 | end:379 | pic:3' TGTTTCAAGACATCACGTGACT 5'& ..|||| |||||||. &5' ---GGGTTCCTA--TGCACTGG 3' |
Socs2 | mmu-miR-148b | beg:360 | end:379 | pic:3' TGTTTCAAGACACTACGTGACT 5'& ..|||| ||||||||. &5' ---GGGTTCCT--ATGCACTGG 3' |
Socs2 | mmu-miR-151-3p | beg:487 | end:506 | pic:3' GGAGTTCCTCGGAGTCAGATC 5'& ||| ||.| .|||||||. &5' CCT---GGGG-TTCAGTCTG- 3' |
Socs2 | mmu-miR-151-3p | beg:130 | end:156 | pic:3' GGAGTTCCT------CGGAGTCAGATC 5'& ||.||||| | ||||||||| &5' -CTTAAGGACAGTTGGGCTCAGTCTA- 3' |
Socs2 | mmu-miR-152 | beg:358 | end:379 | pic:3' GGTTCAAGACAGTACGTGACT 5'& . .|||| .||||||||. &5' TTGGGTTCC--TATGCACTGG 3' |
Socs2 | mmu-miR-185 | beg:0 | end:13 | pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |. ||||||||. &5' ---------GTATTTCTCTCT- 3' |
Socs2 | mmu-miR-185 | beg:212 | end:233 | pic:3' AGTCCTTG--ACGGAAAGAGAGGT 5'& |||. || ||||||.||| &5' ----GAATGATG-CTTTCTTTCC- 3' |
Socs2 | mmu-miR-1903 | beg:427 | end:447 | pic:3' ACAGAGTCCTTCTT----CTTCTTCC 5'& |||.|| ||||.||| &5' -------GGAGGACAGCTGAAGGAGG 3' |
Socs2 | mmu-miR-1927 | beg:145 | end:166 | pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||||||. ||| |. |||| &5' TCAGTCT--AAC-TTAA-AGGT- 3' |
Socs2 | mmu-miR-1937b | beg:490 | end:506 | pic:3' ACCCCCGAG-CAGGCCCTA 5'& ||||.|| |||.| &5' --GGGGTTCAGTCTG---- 3' |
Socs2 | mmu-miR-1953 | beg:216 | end:235 | pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || ||.| ||||||.| &5' --GATGCTTT----CTTTCCTA 3' |
Socs2 | mmu-miR-1956 | beg:95 | end:113 | pic:3' AGGCGACTGAGTCGGGACCTGA 5'& |.| | |.|||||. &5' ------GGCCCTCCTCTGGAT- 3' |
Socs2 | mmu-miR-1957 | beg:514 | end:535 | pic:3' CAGTATACGAGA-TGGTGAC 5'& ||.||| |.|. |.| ||| &5' GTTATA-GTTTGCATC-CTG 3' |
Socs2 | mmu-miR-1959 | beg:511 | end:534 | pic:3' GAGGTGAC----TC-GATGTAGGGG 5'& | ||| || .|.|||||. &5' ---C-CTGTTATAGTTTGCATCCT- 3' |
Socs2 | mmu-miR-1961 | beg:39 | end:55 | pic:3' AAGATTGATG-ATGGAGT 5'& ||| || |.||||| &5' ----AAC-ACATGCCTCA 3' |
Socs2 | mmu-miR-1969 | beg:408 | end:425 | pic:3' TGGGTACAATTTCA-GAGGTAGAA 5'& |||| .|||||.| &5' ---------AAAGGCTTCCATTT- 3' |
Socs2 | mmu-miR-196a | beg:47 | end:67 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& || | |.|| |.||||.|| &5' -CCT-C-ATAT-AGACTATCT- 3' |
Socs2 | mmu-miR-199bstar | beg:360 | end:381 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& .||| ||| .||||||| &5' ----GGGTTC-CTATGCACTGGG 3' |
Socs2 | mmu-miR-201 | beg:360 | end:382 | pic:3' TTCTTGT---TACGGAATGACTCAT 5'& | . |||| ||||.|| &5' --GGGTTCCTATGC---ACTGGGT- 3' |
Socs2 | mmu-miR-202-3p | beg:225 | end:244 | pic:3' AGAAGGGTACGCGATATGGAGA 5'& .||||.||| |||. ||| &5' -TTTCCTATG-GCTG---CTC- 3' |
Socs2 | mmu-miR-204 | beg:428 | end:450 | pic:3' TCCGTATCCT----ACTGTTTCCCTT 5'& |||| ||| .|||||| &5' ------AGGACAGCTGAAGGAGGGAA 3' |
Socs2 | mmu-miR-205 | beg:425 | end:445 | pic:3' GTCTGAGGCCACCTT---ACTTCCT 5'& || ||| ||||||| &5' --------GGAGGACAGCTGAAGGA 3' |
Socs2 | mmu-miR-211 | beg:427 | end:450 | pic:3' TCCGTTTCCT----ACTGTTTCCCTT 5'& ..|||| ||| .|||||| &5' ----GGAGGACAGCTGAAGGAGGGAA 3' |
Socs2 | mmu-miR-2134 | beg:298 | end:317 | pic:3' CGTGGGGCAAAGGGTTCTG 5'& || |||||||. &5' --ACAAAATGTCCCAAGG- 3' |
Socs2 | mmu-miR-23a | beg:63 | end:85 | pic:3' CCTTTAGGG--AC--CGTTACACTA 5'& ||| || || |||||| &5' -----TCCGAATGCAGCTATGTGA- 3' |
Socs2 | mmu-miR-23b | beg:63 | end:85 | pic:3' CCATTAGGG--AC--CGTTACACTA 5'& ||| || || |||||| &5' -----TCCGAATGCAGCTATGTGA- 3' |
Socs2 | mmu-miR-26bstar | beg:416 | end:437 | pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||| ||||.|||| &5' ---CCATTTCCAGGAGGACAG- 3' |
Socs2 | mmu-miR-2861 | beg:450 | end:473 | pic:3' GGCGGGCGGC--GGTCCGGGG 5'& || |. ||.| ||||||..| &5' CC-CTGGCTGACCCAGGCTTC 3' |
Socs2 | mmu-miR-28star | beg:511 | end:546 | pic:3' AGGTCG---TCGAGTGT---------TAGATCAC 5'& || |. ||.| || ||||||| &5' -CCTGTTATAGTTTGCATCCTGATGTATCTAGT- 3' |
Socs2 | mmu-miR-326 | beg:77 | end:100 | pic:3' TGAC-CTCCTTCCCGGGTCTCC 5'& || || .|| |||||||| &5' --TGTGAAAGAGAACCCAGAGG 3' |
Socs2 | mmu-miR-335-3p | beg:423 | end:445 | pic:3' CCAGTCCTCGTTATTACTTTTT 5'& |||||| | ||||..| &5' ---CAGGAGGACAGCTGAAGGA 3' |
Socs2 | mmu-miR-337-3p | beg:198 | end:218 | pic:3' TCCGTAGTATATCCTCGACTT 5'& |||.| ||||||| &5' AGGTAGTTTT----AGCTGAA 3' |
Socs2 | mmu-miR-345-3p | beg:482 | end:502 | pic:3' CAGAGGTCTGGGGA--TCAAGTCC 5'& |.|||| ||| .|||||| &5' ----CTAGACGCCTGGGGTTCAG- 3' |
Socs2 | mmu-miR-3473 | beg:0 | end:13 | pic:3' CCGACTCGGT-AGAGAGGT 5'& |. ||||||. &5' ------GTATTTCTCTCT- 3' |
Socs2 | mmu-miR-374star | beg:56 | end:79 | pic:3' GAGCCTGTTACTA--TTATGTTGG 5'& ||| |||.||.|. &5' ----GACTATCTCCGAATGCAGCT 3' |
Socs2 | mmu-miR-376c | beg:489 | end:510 | pic:3' TGCACTTTAAAGG-AGATACAA 5'& || . ||| |||.|||| &5' ---TGGGG-TTCAGTCTGTGTT 3' |
Socs2 | mmu-miR-381 | beg:342 | end:358 | pic:3' TGTCTCTCGAACGGGAACATAT 5'& || ||||||.|||| &5' -----GA-CTTGCCTTTGT--- 3' |
Socs2 | mmu-miR-381 | beg:556 | end:577 | pic:3' TGTCTCTCGAACGG---GAACATAT 5'& |||| || ||||||| &5' ------AGCTGACCATGCTTGTAT- 3' |
Socs2 | mmu-miR-384-5p | beg:511 | end:530 | pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||| | || ||||.|| &5' ------CCT-GTTATAGTTTGCA 3' |
Socs2 | mmu-miR-432 | beg:412 | end:431 | pic:3' GACG--GGTGACTAGATGAGGTTCT 5'& || |||. .||||.|| &5' --GCTTCCAT-------TTCCAGGA 3' |
Socs2 | mmu-miR-448 | beg:582 | end:597 | pic:3' TACCCTGTAGGATGTATACGTT 5'& |.||. ||||||| &5' ------CGTCT----TATGCAA 3' |
Socs2 | mmu-miR-450b-3p | beg:299 | end:315 | pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||||||| |||||| &5' -------CAAAATG-TCCCAA- 3' |
Socs2 | mmu-miR-465a-5p | beg:252 | end:268 | pic:3' AGTGTAGTCACGGTAAGATTTAT 5'& ||| ||.|||||. &5' ----------GCCCTTTTAAATG 3' |
Socs2 | mmu-miR-465b-5p | beg:251 | end:268 | pic:3' GTCTAGTCGTGGTAAGATTTAT 5'& .|| || ||.|||||. &5' ------GGC-CC-TTTTAAATG 3' |
Socs2 | mmu-miR-465c-5p | beg:252 | end:268 | pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& ||| ||.|||||. &5' ---------GCCCTTTTAAATG 3' |
Socs2 | mmu-miR-466l | beg:565 | end:581 | pic:3' TTATACACACGTACATAAATAT 5'& ||| ||||||||| &5' --------TGCTTGTATTTAT- 3' |
Socs2 | mmu-miR-483 | beg:3 | end:25 | pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& ||.| ||||||.| .|||.|| &5' -TCTC-TCTCTTTT-TCGTTTT 3' |
Socs2 | mmu-miR-488 | beg:243 | end:265 | pic:3' CTGGTTCTTTGTC-GGAAAGTT 5'& ||.|| ||..| |||||.|| &5' GATCA---AATGGCCCTTTTAA 3' |
Socs2 | mmu-miR-692 | beg:390 | end:406 | pic:3' CTCACTCCGCGAGT--TTCTCTA 5'& |||| |.|||| &5' ---------GCTCCATAGGAGA- 3' |
Socs2 | mmu-miR-712 | beg:428 | end:446 | pic:3' CCATGGCGGGCCCACTTCCTC 5'& || || || |||||||| &5' GG-ACAGC-----TGAAGGAG 3' |
Socs2 | mmu-miR-741 | beg:0 | end:10 | pic:3' AGATGTATCTTACCGTAGAGAGT 5'& |.||.|||| &5' -------------GTATTTCTC- 3' |
Socs2 | mmu-miR-871 | beg:95 | end:114 | pic:3' GTACTGACCGTGATTAGACTTAT 5'& ||| || ||||.||| &5' -------GGCCCTCCTCTGGATA 3' |
Socs2 | mmu-miR-878-5p | beg:164 | end:185 | pic:3' ACAGAACTG-TAGGTTGATCTAT 5'& ||| || .|.||||.|| &5' -----TGAAGATGTAGCTAGGTA 3' |
Socs2 | mmu-miR-878-5p | beg:95 | end:114 | pic:3' ACAGAACTGT-AGGTTGATCTAT 5'& |.| ||| ||.|||| &5' ------GGCCCTCCT-CTGGATA 3' |
Socs2 | mmu-miR-881star | beg:0 | end:13 | pic:3' TCTACACTGACAAT-AGAGAGAC 5'& || ||||||| &5' ----------GTATTTCTCTCT- 3' |
Socs2 | mmu-miR-882 | beg:113 | end:134 | pic:3' TGATTACGCGA-TTGAGAGAGGA 5'& ||||| ||.||||||.| &5' -----TGCGCAGAATTCTCTCTT 3' |
Socs2 | mmu-miR-882 | beg:213 | end:234 | pic:3' TGATTAC-GCGATTGAGAGAGGA 5'& |||| .||| .|||.|||| &5' ---AATGATGCT--TTCTTTCCT 3' |
Socs2 | mmu-miR-882 | beg:0 | end:16 | pic:3' TGATTACGCGATTGAGAGAGGA 5'& |. | |||||||.| &5' ------GTA-TTTCTCTCTCTT 3' |
Socs2 | mmu-miR-98 | beg:39 | end:68 | pic:3' TTGT-TATGTTGAA----TGATGGAGT 5'& |||| ||.| | ||||.||| &5' AACACATGCCTCATATAGACTATCTC- 3' |
Socs2 | mmu-miR-191 | beg:544 | end:558 | pic:3' GTCGACGAAAACCCTAAGGCAAC 5'& || ||||||| &5' -----------GGAGTTCCGTT- 3' |