DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Ubxn2a; Ubxd4 ATTTA 185-961 1302-1306;1882-1886;2432-2436 Ubxn2a; Ubxd4 WTATTTATW 185-961 1300-1308 Ubxn2a; Ubxd4 WWATTTAWW 185-961 1300-1308

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT606113 mmu-miR-193a-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596799 mmu-miR-291a-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596800 mmu-miR-294-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596796 mmu-miR-295-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596795 mmu-miR-302a-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596793 mmu-miR-106a-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596791 mmu-miR-106b-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596790 mmu-miR-20a-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596792 mmu-miR-93-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596783 mmu-miR-350-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT009930 mmu-miR-17-5p Mus musculus Ubxn2a 217379 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT009930 mmu-miR-17-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596794 mmu-miR-20b-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596797 mmu-miR-302b-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596798 mmu-miR-302d-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT606114 mmu-miR-193b-3p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596785 mmu-miR-1186a Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT585456 mmu-miR-1896 Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT596787 mmu-miR-1971 Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596788 mmu-miR-1981-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT585457 mmu-miR-3110-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT585457 mmu-miR-3110-5p Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596789 mmu-miR-3471 Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT596786 mmu-miR-1186b Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT585458 mmu-miR-5125 Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT585458 mmu-miR-5125 Mus musculus Ubxn2a 217379 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 217379 Ubxn2a cguuccgucaccggACAUGUCa ||||||| uaacaugagcaugaUGUACAGu 2 9 1661 1682 [mm9:12:4890841-4890862:-] 0.5310 140 7 -16.59 -0.6127 MIMAT0000129 mmu-miR-30a* 217379 Ubxn2a cgacgUUUGUAGGCUGACUUUc :||| | : ||||||| gcaaaGAACUUAUUACUGAAAu 2 18 137 158 [mm9:12:4892365-4892386:-] 0.4979 153 7 -9.56 -0.8127 MIMAT0004524 mmu-miR-30b* 217379 Ubxn2a cugCAUUUGUAGGUGUAGGGUc || | ||| ||||||| cuaGUUUAAAUC--CAUCCCAg 2 20 663 682 [mm9:12:4886706-4886725:-] 0.5007 148 7 -19.12 -0.3990 MIMAT0004529 mmu-miR-125b* 217379 Ubxn2a ucCAGGGUUCUUGGACUGAACa |||:: | |: ||||||| ggGUCUUUA-UAUAUGACUUGc 2 21 620 640 [mm9:12:4891883-4891903:-] 0.5000 150 7 -17.96 -0.7246 MIMAT0000137 mmu-miR-126-5p 217379 Ubxn2a gcGCAUGGUUUUCAUUAUUAc | ||:: ||| ||||||| ugCAUAUU-AAACUAAUAAUu 2 20 1435 1454 [mm9:12:4885934-4885953:-] 0.5009 157 7 -8.87 -0.6986 MIMAT0000143 mmu-miR-9* 217379 Ubxn2a ugaaagccaAUAGAUCGAAAUa | |: ||||||| guauauacaUUUUAAGCUUUAc 2 14 1382 1403 [mm9:12:4891120-4891141:-] 0.5321 145 7 -6.03 -0.6803 MIMAT0004531 mmu-miR-135a* 217379 Ubxn2a gcggUGCCGA--GGUUAGGG-AUAu | |||| :||||||| ||| uuugAGGGCUUCUCAAUCCCUUAUg 2 19 91 115 [mm9:12:4887273-4887297:-] 0.5440 129 0 -21.01 -0.1526 MIMAT0000152 mmu-miR-140* 217379 Ubxn2a ggcaccAAGAU--GGGACACCAu ||||: |:||||||| ucccucUUCUGGCCUCUGUGGUc 2 16 1367 1389 [mm9:12:4885999-4886021:-] 0.5009 154 7 -19.94 -0.1505 MIMAT0000152 mmu-miR-140* 217379 Ubxn2a ggcaccaagaugggACACCAu |||||| gucauuaaucuuaaUGUGGUc 2 8 252 272 [mm9:12:4887116-4887136:-] 0.5440 120 6 -11.69 -0.1239 MIMAT0000249 mmu-miR-30e* 217379 Ubxn2a cgacaUUUGUAGGCUGACUUUc :||| | : ||||||| gcaaaGAACUUAUUACUGAAAu 2 18 137 158 [mm9:12:4892365-4892386:-] 0.4979 153 7 -7.90 -0.8127 MIMAT0000367 mmu-miR-291a-5p 217379 Ubxn2a ucucuccCGGAGGUGAA-ACUAc |::||:|||| |||| cuuuucaGUUUCUACUUGUGAUg 2 16 451 473 [mm9:12:4886915-4886937:-] 0.5187 127 0 -18.55 -0.1756 MIMAT0004574 mmu-miR-294* 217379 Ubxn2a ucuauccCGGAGGU-AAAACUCa |::|::| ||||||| -----uaGUUUUUAUUUUUGAGa 2 16 1 18 [mm9:12:4887370-4887387:-] 0.5440 150 7 -11.84 -0.4915 MIMAT0000375 mmu-miR-297a 217379 Ubxn2a ugUACGUGUAC-GUGUGUAUGUa || :|: || ||:||||||| ggAU-UAUUUGCCAUACAUACAu 2 21 637 658 [mm9:12:4886730-4886751:-] 0.5007 157 7 -15.44 -0.4410 MIMAT0000375 mmu-miR-297a 217379 Ubxn2a uguacGUGUACGUGUGUAUGUa :|:| |:| ||||||| caaguUAUACGUAGACAUACAc 2 18 1398 1419 [mm9:12:4885969-4885990:-] 0.5009 157 7 -12.82 -0.2162 MIMAT0000375 mmu-miR-297a 217379 Ubxn2a uguaCGUGUACGUGUGUAU-GUa |||:| | | ||||| || gucaGCAUAAG-AGACAUAGCAa 2 19 1008 1029 [mm9:12:4886359-4886380:-] 0.5007 120 0 -11.48 -0.5728 MIMAT0004578 mmu-miR-300* 217379 Ubxn2a uguuUCCUAUUGGAGAGA-AGUu | || || | |||| ||| uuccAUGACAAACACUCUCUCAu 2 19 21 43 [mm9:12:4892480-4892502:-] 0.5303 122 0 -11.76 -0.7323 MIMAT0004616 mmu-miR-30c-1* 217379 Ubxn2a ccucAUUUGUU-GGGAGAGGGUc |||:||| | |||||||| augcUAAGCAAGCACUCUCCCAa 2 19 736 758 [mm9:12:4891765-4891787:-] 0.5000 169 7 -22.69 -0.2584 MIMAT0004616 mmu-miR-30c-1* 217379 Ubxn2a ccucauuuGUUGGGAGAGGGUc ||| ||||||| ugcuauccCAAAAGUCUCCCAc 2 15 839 860 [mm9:12:4891663-4891684:-] 0.5000 146 7 -14.56 -0.1627 MIMAT0005438 mmu-miR-30c-2* 217379 Ubxn2a ucucAUUUG-UCGGAAGAGGGUc |||:| ||| ||||||| augcUAAGCAAGCACUCUCCCAa 2 19 736 758 [mm9:12:4891765-4891787:-] 0.5000 161 7 -20.30 -0.2607 MIMAT0005438 mmu-miR-30c-2* 217379 Ubxn2a ucucauuugucggaAGAGGGUc ||||||| ugcuaucccaaaagUCUCCCAc 2 9 839 860 [mm9:12:4891663-4891684:-] 0.5000 140 7 -11.95 -0.1612 MIMAT0004617 mmu-miR-148a* 217379 Ubxn2a ucagccucacagagUCUUGAAa ||||||| cacaugugaagcaaAGAACUUa 2 9 127 148 [mm9:12:4892375-4892396:-] 0.4979 140 7 -9.78 -0.8345 MIMAT0004621 mmu-let-7b* 217379 Ubxn2a cccuuccguCAUCCAA-CAUAUc |||| || ||||| uaaaauuguGUAGCUUAGUAUAa 2 14 534 556 [mm9:12:4886832-4886854:-] 0.5527 121 0 -8.10 -0.8816 MIMAT0004623 mmu-let-7f* 217379 Ubxn2a cccuuccguUAUCUAACA-UAUc ||| ||||| ||| uugugcuuuAUAAAUUGUCAUAu 2 14 1337 1359 [mm9:12:4891164-4891186:-] 0.5321 121 0 -4.00 -0.6501 MIMAT0004625 mmu-miR-16* 217379 Ubxn2a agUCGUCGUGUCAGUUAU-GACc | :| ||| | |||| ||| ccAAUAUGACAUUAAAUAGCUGu 2 21 229 251 [mm9:12:4887137-4887159:-] 0.5440 120 0 -6.72 -0.5991 MIMAT0004628 mmu-miR-21* 217379 Ubxn2a cugUCGGGUAGCUGACGACAAc ||: | |:| |||||||| aaaAGUACUUUGUCUGCUGUUu 2 20 1785 1806 [mm9:12:4890717-4890738:-] 0.6843 163 7 -16.14 -0.2092 MIMAT0004629 mmu-miR-22* 217379 Ubxn2a auuucgaACGGUGACU-UCUUGa |||| ||| ||||| gugacagUGCCCAUGACAGAACc 2 16 1289 1311 [mm9:12:4891212-4891234:-] 0.5321 123 0 -14.14 -0.2947 MIMAT0004631 mmu-miR-29a* 217379 Ubxn2a gaCUUGUGGUUU--UC--UUUAGUCa ||::|:: || || ||||||| caGAGUAUUCAAUUAGCUAAAUCAGc 2 21 281 306 [mm9:12:4887082-4887107:-] 0.5440 150 7 -13.35 -0.4801 MIMAT0004636 mmu-miR-93* 217379 Ubxn2a gcccuucacgaucgaGUCGUCa |||||| aauauuaucuccaaaCAGCAGa 2 8 318 339 [mm9:12:4887049-4887070:-] 0.5714 120 6 -10.15 -0.1716 MIMAT0000551 mmu-miR-323-3p 217379 Ubxn2a ucuccAGCUGGCACAUUACAc || |:: |||||||| uccuuUCAAUU-UGUAAUGUa 2 17 696 715 [mm9:12:4886673-4886692:-] 0.5012 150 7 -7.86 -1.1045 MIMAT0000551 mmu-miR-323-3p 217379 Ubxn2a ucuccagcuggcACAUUACAc |||||||| uuucuccaaaaaUGUAAUGUc 2 10 1502 1522 [mm9:12:4885866-4885886:-] 0.5013 145 7 -8.02 -0.6895 MIMAT0000556 mmu-miR-324-3p 217379 Ubxn2a ucGUCG--UGGACCCCGUCACc |||| || ||||||| ucCAGCAUACACAUGGCAGUGc 2 19 1309 1330 [mm9:12:4886058-4886079:-] 0.5009 145 7 -19.97 -0.6545 MIMAT0000558 mmu-miR-325* 217379 Ubxn2a ugugaaugacUCGUGGAUGAUCc ||: |||||||| ucagaucaaaAGUUCCUACUAGg 2 14 1060 1082 [mm9:12:4891441-4891463:-] 0.5089 153 7 -19.18 -0.1815 MIMAT0000569 mmu-miR-330* 217379 Ubxn2a agagacguccgGGACACGAAACg :|| ||||||| acugaaauacaUCUUUGCUUUGu 2 13 151 173 [mm9:12:4892350-4892372:-] 0.4979 148 7 -16.91 -0.6679 MIMAT0004643 mmu-miR-331-5p 217379 Ubxn2a ccuagggacccuggUAUGGAUc ||||||| cuauucagaaaaaaAUACCUAu 2 9 189 210 [mm9:12:4887178-4887199:-] 0.5440 140 7 -10.49 -1.1059 MIMAT0000593 mmu-miR-344 217379 Ubxn2a ugucaGUCCGAAAC-CGAU-CUAGu || ||| | |||| |||| gcccaCACACUUGGUGCUAUGAUCa 2 19 1201 1225 [mm9:12:4891298-4891322:-] 0.5358 121 0 -13.78 -0.3235 MIMAT0000595 mmu-miR-345-5p 217379 Ubxn2a uuCGUGACCUGAUCCCCAGUCg || || :| | ||||||| ugGCUCUAAGCCA-GGGUCAGu 2 21 151 171 [mm9:12:4887217-4887237:-] 0.5440 150 7 -17.78 -0.2532 MIMAT0004656 mmu-miR-345-3p 217379 Ubxn2a cagaGGUCUGGGGAUCAAGUCc |::|: : |||||||| uggaCUGGGAAUGUAGUUCAGu 2 19 610 631 [mm9:12:4886757-4886778:-] 0.5267 150 7 -18.38 -0.3178 MIMAT0005444 mmu-miR-218-2* 217379 Ubxn2a gcGCCACGAACUGUCUU-GGUAc | |||: | ||||| |||| ucCUGUGUAAGCCAGAAGCCAUc 2 21 458 480 [mm9:12:4892043-4892065:-] 0.5011 128 0 -13.07 -0.2992 MIMAT0000672 mmu-miR-199b* 217379 Ubxn2a cuuguccaucagaUUUGUGACCc ||||||||| caaacaaacaaaaAAACACUGGc 2 11 1258 1280 [mm9:12:4886108-4886130:-] 0.5005 150 7 -13.88 -0.4526 MIMAT0004670 mmu-miR-7a* 217379 Ubxn2a auACCGUCUGACACUAAACAAc |||:| : | | ||||||| uuUGGUAUGGU-UUAUUUGUUu 2 21 593 613 [mm9:12:4891910-4891930:-] 0.5000 154 7 -10.78 -0.5893 MIMAT0003387 mmu-miR-376a* 217379 Ubxn2a ugaGUAUCUUCCUCUUAGAUGg || || | ||||||| uccCAGCUAAUGCUAAUCUACu 2 20 1505 1526 [mm9:12:4890997-4891018:-] 0.5116 147 7 -9.51 -0.3223 MIMAT0000745 mmu-miR-380-3p 217379 Ubxn2a uucUACACCUGGUAUG-AUGUAu || || |||||| ||||| auuAUUUG--CCAUACAUACAUg 2 20 639 659 [mm9:12:4886729-4886749:-] 0.5007 128 0 -15.38 -0.4518 MIMAT0000745 mmu-miR-380-3p 217379 Ubxn2a uuCUACACCUGGUA-UGA-UGUAu | ||| |||||| ||| |||| guGUUGU-GACCAUAACUAACAUu 2 21 1592 1614 [mm9:12:4890909-4890931:-] 0.5213 133 0 -16.78 -0.8581 MIMAT0001090 mmu-miR-409-3p 217379 Ubxn2a uccccAAGUGG-CUCGUU-GUAAg | |||| |: ||| |||| aagaaUACACCUGGUCAAGCAUUa 2 18 1252 1275 [mm9:12:4891248-4891271:-] 0.5358 120 0 -13.25 -0.3647 MIMAT0003388 mmu-miR-376b* 217379 Ubxn2a auugguAUCUUCCUUAUAGGUg || ||| ||||||| uucugcUACAAG--AUAUCCAa 2 17 1346 1365 [mm9:12:4886023-4886042:-] 0.5009 149 7 -9.25 -0.2732 MIMAT0001422 mmu-miR-434-3p 217379 Ubxn2a uccuCAGCUCACUACCAAGUUu || || | ||||||| ggcuGUAGA-UCCAGGUUCAAu 2 19 1287 1307 [mm9:12:4886081-4886101:-] 0.5009 144 7 -9.52 -0.3354 MIMAT0001422 mmu-miR-434-3p 217379 Ubxn2a ucCUCAGCUCACUACCAA-GUUu ||| | |||||||| ||| cuGAGAAAAAUGAUGGUUGCAAg 2 21 21 43 [mm9:12:4887345-4887367:-] 0.5440 132 0 -16.76 -0.4799 MIMAT0001637 mmu-miR-452 217379 Ubxn2a caGAGUCAAAGGAGAC-GUUUGu || | ||:| || ||||| guCUGUGCUUUCCAUGACAAACa 2 21 12 34 [mm9:12:4892489-4892511:-] 0.5303 120 0 -16.04 -0.5113 MIMAT0002106 mmu-miR-465a-5p 217379 Ubxn2a agUGUAGUCACGGUAAGAUUUAu |: |:| || :: ||||||| uaAUCUUAAUG-UGGUCUAAAUu 2 22 257 278 [mm9:12:4887110-4887131:-] 0.5440 151 7 -8.80 -0.3306 MIMAT0004759 mmu-miR-466a-5p 217379 Ubxn2a auACAUGUACAUGU--GUGUGUau |||| ||||| | |||||| uuUGUA-AUGUAAAAGCACACAca 3 21 705 727 [mm9:12:4886661-4886683:-] 0.5012 145 0 -17.40 -0.1076 MIMAT0002107 mmu-miR-466a-3p 217379 Ubxn2a agaauacacacgcacAUACAUAu ||||||| acaauaaugagaaaaUAUGUAUc 2 9 1687 1709 [mm9:12:4890814-4890836:-] 0.5440 140 7 -5.29 -0.6275 MIMAT0002111 mmu-miR-470 217379 Ubxn2a ugAGUGGUCACG--GUC--AGGUUCUu |||:: | || ||| ||||||| acUCAUUUG-GCAACAGUAUCCAAGAu 2 22 491 516 [mm9:12:4886872-4886897:-] 0.5354 149 7 -20.48 -0.6101 MIMAT0004781 mmu-miR-532-3p 217379 Ubxn2a acguUCGGAAC-CCACACCCUCc || | || | ||||||| aaguAGACAUGCAGAGUGGGAGa 2 19 41 63 [mm9:12:4887325-4887347:-] 0.5440 149 7 -17.03 -0.6945 MIMAT0003167 mmu-miR-540-3p 217379 Ubxn2a gguccuagcugGAGACUGGa :||||||| cucucucauuaUUCUGACCa 2 10 35 54 [mm9:12:4892469-4892488:-] 0.5170 141 7 -12.59 -1.1826 MIMAT0003173 mmu-miR-547 217379 Ubxn2a gaGUGAGUUUCUACAUGGUUc | :|:: | ||||||| uaCCUUUGCUCAGGUACCAAu 2 20 351 371 [mm9:12:4892152-4892172:-] 0.5011 143 7 -13.82 -0.1993 MIMAT0005295 mmu-miR-376c* 217379 Ubxn2a auuuguAUCUUCCUUAUAGGUg || ||| ||||||| uucugcUACAAG--AUAUCCAa 2 17 1346 1365 [mm9:12:4886023-4886042:-] 0.5009 149 7 -8.60 -0.2732 MIMAT0003186 mmu-miR-369-3p 217379 Ubxn2a uuUCUAGUUGGUACAU-AAUAa | | || | ||||| |||| uaAAAGCAUCAAUGUAGUUAUu 2 20 408 429 [mm9:12:4886959-4886980:-] 0.5319 127 0 -10.14 -0.1145 MIMAT0004789 mmu-miR-450a-3p 217379 Ubxn2a uacuuACGUUUCG-UAGGGGUUa | :| | | |||||||| uucuuUCUACACCAAUCCCCAAg 2 18 522 544 [mm9:12:4891979-4892001:-] 0.5011 148 7 -14.01 -0.3214 MIMAT0004789 mmu-miR-450a-3p 217379 Ubxn2a uacuUACGUUUCGU-AG-GGGUUa | || ||||| || ||||| ugcuAAGC-AAGCACUCUCCCAAc 2 19 737 759 [mm9:12:4891764-4891786:-] 0.5000 123 0 -16.15 -0.2243 MIMAT0004790 mmu-miR-503* 217379 Ubxn2a gguccGUCACCUU-U-GUUAUGAg :||| || | ||||||| uagcuUAGUAUAAUAUCAAUACUa 2 18 544 567 [mm9:12:4886821-4886844:-] 0.5527 147 7 -11.33 -1.2285 MIMAT0003189 mmu-miR-291b-5p 217379 Ubxn2a ccucuccCGGAGGUGAA-ACUAg |::||:|||| |||| cuuuucaGUUUCUACUUGUGAUg 2 16 451 473 [mm9:12:4886915-4886937:-] 0.5187 127 0 -14.24 -0.1756 MIMAT0003190 mmu-miR-291b-3p 217379 Ubxn2a uguuuguUUUAC-CUACGUGAAa | ||| ||||||| ucuuuauAUAUGACUUGCACUUu 2 16 623 645 [mm9:12:4891878-4891900:-] 0.5000 142 7 -11.17 -0.3293 MIMAT0003726 mmu-miR-675-3p 217379 Ubxn2a ugacucgccAAUCCCGUAUGUc || ||||||| agguucaauUUCCAGCAUACAc 2 14 1299 1320 [mm9:12:4886068-4886089:-] 0.5009 141 7 -9.22 -0.3275 MIMAT0004187 mmu-miR-744 217379 Ubxn2a acGACAAUCGGGA--UCGG-GGCGu || ||: :||| |||| |||| caCUUUUGAUCCUCCAGCCUCCGCc 2 21 640 664 [mm9:12:4891859-4891883:-] 0.5000 127 0 -22.57 -0.2064 MIMAT0004820 mmu-miR-744* 217379 Ubxn2a uccaacuccaaucACCGUUGUc |||||||| ucaaauacucauuUGGCAACAg 2 10 485 506 [mm9:12:4886882-4886903:-] 0.5354 145 7 -15.12 -0.6901 MIMAT0003732 mmu-miR-668 217379 Ubxn2a ccaUCACCCG-GCUCGG----CUCACUGu ||| | | | |||: ||||||| uucAGUCGUCACAAGCUAGGAGAGUGACa 2 22 122 150 [mm9:12:4887238-4887266:-] 0.5440 147 7 -19.01 -0.4998 MIMAT0015219 mmu-miR-3475 217379 Ubxn2a aaguUUGGUACACGGAGGUCu | :: || ||||||| uugcACUUUUGAUCCUCCAGc 2 18 637 657 [mm9:12:4891866-4891886:-] 0.5000 145 7 -14.79 -0.3096 MIMAT0003740 mmu-miR-674 217379 Ubxn2a auguggugagGGUAGAGUCAcg |:|||||||| uaaauguuagCUAUCUCAGUuu 3 13 348 369 [mm9:12:4887019-4887040:-] 0.5988 136 0 -16.05 -0.1186 MIMAT0003459 mmu-miR-682 217379 Ubxn2a guCUGAAGUG-ACACUG-ACGUc | |||:|: | |||| |||| ggGUCUUUAUAUAUGACUUGCAc 2 20 620 642 [mm9:12:4891881-4891903:-] 0.5000 126 0 -12.70 -0.5137 MIMAT0003461 mmu-miR-683 217379 Ubxn2a cuccugugucgaaUGUCGUCc ||||||| auauuaucuccaaACAGCAGa 2 9 319 339 [mm9:12:4887049-4887069:-] 0.5714 140 7 -10.43 -1.1812 MIMAT0003461 mmu-miR-683 217379 Ubxn2a cuccUGUGUC-GAAUGU-CGUCc ||::|| | |||| |||| uuauACGUAGACAUACACGCAGa 2 18 1402 1424 [mm9:12:4885964-4885986:-] 0.5009 124 0 -15.00 -0.8596 MIMAT0003461 mmu-miR-683 217379 Ubxn2a cuccugugUCGAAUGUC-GUCc :|||||||| ||| auucuguaGGCUUACAGACAGa 2 14 1531 1552 [mm9:12:4890971-4890992:-] 0.5213 125 0 -15.77 -0.5080 MIMAT0003464 mmu-miR-686 217379 Ubxn2a agaaguggcagacccUUCGUUa |||||| cgaaaaacaaacaaaAAGCAAa 2 8 1227 1248 [mm9:12:4886140-4886161:-] 0.5002 120 6 -7.10 -0.1073 MIMAT0003464 mmu-miR-686 217379 Ubxn2a agaaguggcagACCCUUCGUUa || ||||||| gcccauacacaUGUGAAGCAAa 2 12 120 141 [mm9:12:4892382-4892403:-] 0.4979 147 7 -13.58 -0.7052 MIMAT0004189 mmu-miR-693-3p 217379 Ubxn2a aaugucgguguaGACUUUCGACg :| ||||||| caaaaaaaauucUUCAAAGCUGg 2 12 726 748 [mm9:12:4886640-4886662:-] 0.5011 143 7 -10.61 -0.1631 MIMAT0003474 mmu-miR-694 217379 Ubxn2a gaAGUCCGUUG-UAAAAGUc | | :||: ||||||| auUAAACUAAUAAUUUUCAa 2 18 1440 1459 [mm9:12:4885929-4885948:-] 0.5009 144 7 -4.71 -1.0614 MIMAT0003474 mmu-miR-694 217379 Ubxn2a gaagucCGUUGUAAAAGUc | || :|||||| acuauaGAAAAGUUUUCAa 2 14 892 910 [mm9:12:4886478-4886496:-] 0.5017 133 6 -8.38 -0.1211 MIMAT0003474 mmu-miR-694 217379 Ubxn2a gaaguccguuguAAAAGUc |||||| aaaaauaccuauUUUUCAa 2 8 199 217 [mm9:12:4887171-4887189:-] 0.5440 120 6 -1.84 -0.1562 MIMAT0004826 mmu-miR-146b* 217379 Ubxn2a ugGUCUUGAC--UCAG---GGAUCCCg :|| :||| :||: ||||||| ccUAGUGCUGGCGGUUAAACCUAGGGc 2 21 95 121 [mm9:12:4892402-4892428:-] 0.5035 146 7 -26.50 -0.2504 MIMAT0003476 mmu-miR-669b 217379 Ubxn2a uguacguguacgUGUGUUUUGa | :|||||| aaaacaaacaaaAAGCAAAACa 2 11 1230 1251 [mm9:12:4886137-4886158:-] 0.5002 126 6 -8.37 -0.1580 MIMAT0003479 mmu-miR-669c 217379 Ubxn2a uguGUGUAGGUGUGUGUUGAUa | || :| |::||||||| cucCUCAGUC-CGUACAACUAa 2 20 1109 1129 [mm9:12:4891394-4891414:-] 0.5068 153 7 -15.27 -0.6279 MIMAT0003480 mmu-miR-297b-5p 217379 Ubxn2a ugUACAA-GUACGUGUGUAUGUa | ||| :| |:| ||||||| ucAAGUUAUACGUAGACAUACAc 2 21 1397 1419 [mm9:12:4885969-4885991:-] 0.5009 159 7 -13.67 -0.2182 MIMAT0003480 mmu-miR-297b-5p 217379 Ubxn2a uguACAAGUACGUGUGUAUGUa | ||:: ||:||||||| gauUAUUUG-CCAUACAUACAu 2 20 638 658 [mm9:12:4886730-4886750:-] 0.5007 153 7 -14.34 -0.4442 MIMAT0004827 mmu-miR-297b-3p 217379 Ubxn2a auacccauacacacAUACAUAu ||||||| caauaaugagaaaaUAUGUAUc 2 9 1688 1709 [mm9:12:4890814-4890835:-] 0.5440 140 7 -5.15 -0.6349 MIMAT0003742 mmu-miR-455 217379 Ubxn2a cacAUAUACGGGCACCUGACg |:|| ::: ||||||| acaUGUAAUUUUAUGGACUGg 2 19 597 617 [mm9:12:4886771-4886791:-] 0.5267 150 7 -13.96 -0.5746 MIMAT0003495 mmu-miR-705 217379 Ubxn2a acgGGUGGGGU----GGAGGGUGg |:|:|||| :||||||| augCUAUCCCAAAAGUCUCCCACa 2 18 838 861 [mm9:12:4891662-4891685:-] 0.5000 152 7 -28.73 -0.5898 MIMAT0003504 mmu-miR-713 217379 Ubxn2a cgacacacggaAGUCACGu ||||||| cuaagccagggUCAGUGCa 2 9 156 174 [mm9:12:4887214-4887232:-] 0.5440 140 7 -17.35 -0.2850 MIMAT0003510 mmu-miR-717 217379 Ubxn2a ucUCUUCCAUAGAGACAGA-CUc | |: | | | |||||| || acACAGAGAAACCCUGUCUAGAa 2 21 866 888 [mm9:12:4886500-4886522:-] 0.5010 120 0 -15.08 -0.7067 MIMAT0003510 mmu-miR-717 217379 Ubxn2a ucucuuccaUAGAGACAGACUc ||| |||||||| ggugcuaugAUCACUGUCUGAa 2 14 1213 1234 [mm9:12:4891289-4891310:-] 0.5358 157 7 -14.99 -0.8586 MIMAT0004236 mmu-miR-741 217379 Ubxn2a agauguaucuuaccguAGAGAGu |||||| uuuccaugacaaacacUCUCUCa 2 8 20 42 [mm9:12:4892481-4892503:-] 0.5303 120 6 -12.73 -0.1011 MIMAT0004841 mmu-miR-871 217379 Ubxn2a guacugaccGUGAUUAGACUUAu |||| :||||||| ugcuaugauCACU-GUCUGAAUu 2 15 1215 1236 [mm9:12:4891287-4891308:-] 0.5358 152 7 -18.06 -0.5327 MIMAT0004843 mmu-miR-879* 217379 Ubxn2a ggcuuucgaacuucgGUAUUCg |||||| auuuuaaauauuaagCAUAAGa 2 8 1234 1255 [mm9:12:4891268-4891289:-] 0.5358 120 6 -7.53 -0.1435 MIMAT0004846 mmu-miR-881 217379 Ubxn2a agAUAAGUCUUUUCUGUGUCAa || || | | ||||||| acUAAUC--UAUAUACACAGUu 2 21 564 583 [mm9:12:4886805-4886824:-] 0.5527 145 7 -13.11 -1.1820 MIMAT0004850 mmu-miR-883b-5p 217379 Ubxn2a acUGACGAUGGGUAAGAGUCAu | ||:|| |:| ||||||| uaAAUGUUAGCUA-UCUCAGUu 2 21 348 368 [mm9:12:4887020-4887040:-] 0.5988 162 7 -18.68 -1.0653 MIMAT0004856 mmu-miR-105 217379 Ubxn2a ugguguucGUAGACUCGUGA-ACc |||||| ||||| || acaaauccCAUCUG-GCACUAUGc 2 16 397 419 [mm9:12:4892104-4892126:-] 0.5011 125 0 -18.38 -0.1841 MIMAT0004863 mmu-miR-220 217379 Ubxn2a uuCACAG--ACU---GUGACACCAcc ||||| | | :| |||||| cuGUGUCAUUAAUCUUAAUGUGGUcu 3 20 248 273 [mm9:12:4887115-4887140:-] 0.5440 125 0 -12.38 -0.1083 MIMAT0004863 mmu-miR-220 217379 Ubxn2a uucacAGACUGUGACACC-ACc |||| | |||||| || uacauUCUG-CCCUGUGGCUGg 2 17 329 349 [mm9:12:4892174-4892194:-] 0.5011 122 0 -20.32 -0.2117 MIMAT0004864 mmu-miR-297a* 217379 Ubxn2a auacccauacacacAUACAUAu ||||||| caauaaugagaaaaUAUGUAUc 2 9 1688 1709 [mm9:12:4890814-4890835:-] 0.5440 140 7 -5.15 -0.6349 MIMAT0004865 mmu-miR-297c 217379 Ubxn2a ugUACAUGUAC-GUGUGUAUGUa || ||: || ||:||||||| ggAU-UAUUUGCCAUACAUACAu 2 21 637 658 [mm9:12:4886730-4886751:-] 0.5007 161 7 -15.10 -0.4377 MIMAT0004865 mmu-miR-297c 217379 Ubxn2a uguacAUGUACGUGUGUAUGUa ||:| |:| ||||||| caaguUAUACGUAGACAUACAc 2 18 1398 1419 [mm9:12:4885969-4885990:-] 0.5009 161 7 -12.95 -0.2142 MIMAT0004866 mmu-miR-297c* 217379 Ubxn2a auacccauacacacAUACAUAu ||||||| caauaaugagaaaaUAUGUAUc 2 9 1688 1709 [mm9:12:4890814-4890835:-] 0.5440 140 7 -5.15 -0.6349 MIMAT0004871 mmu-miR-465b-5p 217379 Ubxn2a gucUAGUCGUG-GUAAGAUUUAu ||| |: :: ||||||| uuaAUCUUAAUGUGGUCUAAAUu 2 20 256 278 [mm9:12:4887110-4887132:-] 0.5440 142 7 -6.51 -0.3389 MIMAT0004873 mmu-miR-465c-5p 217379 Ubxn2a gucuAGUCGCGGUAAGAUUUAu |:| :| :: ||||||| aaucUUAAUG-UGGUCUAAAUu 2 19 258 278 [mm9:12:4887110-4887130:-] 0.5440 144 7 -8.13 -0.3361 MIMAT0004875 mmu-miR-466b-5p 217379 Ubxn2a guACAUGUACAUGU--GUGUGUag |||| ||||| | |||||| uuUGUA-AUGUAAAAGCACACAca 3 21 705 727 [mm9:12:4886661-4886683:-] 0.5012 145 0 -17.66 -0.1076 MIMAT0004876 mmu-miR-466b-3p 217379 Ubxn2a agaauacacacgcacAUACAUAu ||||||| acaauaaugagaaaaUAUGUAUc 2 9 1687 1709 [mm9:12:4890814-4890836:-] 0.5440 140 7 -5.29 -0.6275 MIMAT0005453 mmu-miR-466b-3-3p 217379 Ubxn2a agaauacacacgcacAUACAUAa ||||||| acaauaaugagaaaaUAUGUAUc 2 9 1687 1709 [mm9:12:4890814-4890836:-] 0.5440 140 7 -5.55 -0.6275 MIMAT0004877 mmu-miR-466c-5p 217379 Ubxn2a auACAUGUACGUGU--GUGUGUag |||| |||:| | |||||| uuUGUA-AUGUAAAAGCACACAca 3 21 705 727 [mm9:12:4886661-4886683:-] 0.5012 141 0 -20.17 -0.1076 MIMAT0004878 mmu-miR-466c-3p 217379 Ubxn2a agaauacacacgcacAUACAUAu ||||||| acaauaaugagaaaaUAUGUAUc 2 9 1687 1709 [mm9:12:4890814-4890836:-] 0.5440 140 7 -5.29 -0.6275 MIMAT0004879 mmu-miR-466e-5p 217379 Ubxn2a auACAUGUACAUGU--GUGUGUag |||| ||||| | |||||| uuUGUA-AUGUAAAAGCACACAca 3 21 705 727 [mm9:12:4886661-4886683:-] 0.5012 145 0 -17.66 -0.1076 MIMAT0004880 mmu-miR-466e-3p 217379 Ubxn2a agaauacacacgcacAUACAUAu ||||||| acaauaaugagaaaaUAUGUAUc 2 9 1687 1709 [mm9:12:4890814-4890836:-] 0.5440 140 7 -5.29 -0.6275 MIMAT0004884 mmu-miR-466h 217379 Ubxn2a auguGUGUU-CGUGUACGUGUGu :::|| |:| | |||||| aauuUGUAAUGUAAAAGCACACa 2 19 703 725 [mm9:12:4886663-4886685:-] 0.5012 125 6 -13.46 -0.1007 MIMAT0004930 mmu-miR-466d-5p 217379 Ubxn2a guACAUGUACA--UGCGUGUGUGu |||| |||| | |||||||| uuUGUA-AUGUAAAAGCACACACa 2 21 705 727 [mm9:12:4886661-4886683:-] 0.5012 165 7 -23.63 -1.0082 MIMAT0004930 mmu-miR-466d-5p 217379 Ubxn2a guACAUGUACAUGCGUGUGUGu | | || |:| ||||||| gaUUUCCA-CUGCCCACACACu 2 21 1191 1211 [mm9:12:4891312-4891332:-] 0.5125 150 7 -13.17 -0.1097 MIMAT0004931 mmu-miR-466d-3p 217379 Ubxn2a gauacacacgcacAUACAUAu ||||||| aauaaugagaaaaUAUGUAUc 2 9 1689 1709 [mm9:12:4890814-4890834:-] 0.5440 140 7 -5.29 -0.6275 MIMAT0004938 mmu-miR-875-3p 217379 Ubxn2a guaUCGGAGUCAU-AAAAGUCc | ||||:| : ||||||| uucAUCCUCGGAGCUUUUCAGu 2 19 438 459 [mm9:12:4886929-4886950:-] 0.5021 157 7 -17.17 -0.1407 MIMAT0004938 mmu-miR-875-3p 217379 Ubxn2a guaucggagucAU-AAAAGUcc || |||||| aaaaaaauaccUAUUUUUCAaa 3 11 197 218 [mm9:12:4887170-4887191:-] 0.5440 121 0 -6.78 -0.1601 MIMAT0005292 mmu-miR-582-3p 217379 Ubxn2a aaccCAAGUCAACA-AGUUGUCc || || || | ||||||| gucaGUGCAUUUUUCUCAACAGg 2 19 166 188 [mm9:12:4887200-4887222:-] 0.5440 157 7 -17.11 -0.2745 MIMAT0005830 mmu-miR-466l 217379 Ubxn2a uuauacacaCGUACAUAAAUAu ||| ||||||| cuccaaacaGCAGAUAUUUAUa 2 14 326 347 [mm9:12:4887041-4887062:-] 0.5714 149 7 -9.35 -1.1266 MIMAT0005830 mmu-miR-466l 217379 Ubxn2a uuAUACACACGUACAUAAAUAu ||| | | :: |||||||| uuUAU-UAU-UGGGUAUUUAUu 2 21 803 822 [mm9:12:4891701-4891720:-] 0.5000 148 7 -6.62 -0.4190 MIMAT0005831 mmu-miR-669k 217379 Ubxn2a aacguacgcacauaUACGUAu |||||| gcagacaaaauaucAUGCAUa 2 8 1420 1440 [mm9:12:4885948-4885968:-] 0.5009 120 6 -9.33 -0.2283 MIMAT0005835 mmu-miR-1-2-as 217379 Ubxn2a accuuACAUUUCUUC-AUACAu | |: :|||| ||||| uuugcUUUGUGGAAGUUAUGUu 2 17 164 185 [mm9:12:4892338-4892359:-] 0.4995 120 0 -10.02 -0.5078 MIMAT0005836 mmu-miR-1186 217379 Ubxn2a guacggaaauUAAGGUCGUGAg || |||||||| guuuaaauccAUCCCAGCACUa 2 13 666 687 [mm9:12:4886701-4886722:-] 0.5007 152 7 -14.81 -0.6875 MIMAT0005841 mmu-miR-669h-5p 217379 Ubxn2a cgUGAGU-UGAUAUGUGGGUACGUa || || || | |:| :|||||| acACGCAGACAAAAUA-UCAUGCAu 2 23 1416 1439 [mm9:12:4885949-4885972:-] 0.5009 143 6 -18.61 -0.1056 MIMAT0005841 mmu-miR-669h-5p 217379 Ubxn2a cgUG-AGUUGAUAU-GUGGGUACGua || |||| ||| :|:|||||| auACAUCAA-AAUAUUAUCCAUGCca 3 23 380 404 [mm9:12:4886984-4887008:-] 0.5066 142 0 -19.15 -0.2039 MIMAT0005842 mmu-miR-669h-3p 217379 Ubxn2a acacguacacacauaUACGUAu |||||| cgcagacaaaauaucAUGCAUa 2 8 1419 1440 [mm9:12:4885948-4885969:-] 0.5009 120 6 -9.78 -0.2324 MIMAT0005843 mmu-miR-1188 217379 Ubxn2a agGACCGGGUUGGAGUGUGGu || ||:| | |||||||| ccCUAGCUCUAGCUCACACCa 2 20 958 978 [mm9:12:4886410-4886430:-] 0.5007 167 7 -28.02 -0.1035 MIMAT0005845 mmu-miR-466k 217379 Ubxn2a agUGUACAUGUACAU----GUGUGUGu |: |||| ||||| ||||||| caAUUUGUA-AUGUAAAAGCACACACa 2 22 702 727 [mm9:12:4886661-4886686:-] 0.5012 158 7 -19.13 -1.0082 MIMAT0005845 mmu-miR-466k 217379 Ubxn2a agugUACAUGU-ACAUGUGUGUGu || | || || ||||||| uaugAUUUCCACUGCCCACACACu 2 20 1188 1211 [mm9:12:4891312-4891335:-] 0.5125 154 7 -13.73 -0.1075 MIMAT0005847 mmu-miR-1190 217379 Ubxn2a cuGUCUCCCCUUGGAGUCGACu || || |: |||||||| gaCAUAGAUGG--CUCAGCUGu 2 21 1068 1087 [mm9:12:4886301-4886320:-] 0.5007 149 7 -20.64 -0.1542 MIMAT0005852 mmu-miR-1194 217379 Ubxn2a uccuAGAUCGUCAAUGAGUAAg || | : ||||||||| guuuUCAAAUCUUUACUCAUUu 2 19 903 924 [mm9:12:4886464-4886485:-] 0.5025 154 7 -11.52 -1.0163 MIMAT0005852 mmu-miR-1194 217379 Ubxn2a ucCUA-GAUCGUCAAUGAGUAAg ||| || || |||||||| aaGAUACU--CAAAUACUCAUUu 2 21 478 498 [mm9:12:4886890-4886910:-] 0.5354 152 7 -12.16 -0.6062 MIMAT0005854 mmu-miR-467g 217379 Ubxn2a uaUA-UACACACACAUACAUAu || ||| | ||||||| caAUAAUGAGAAAAUAUGUAUc 2 20 1688 1709 [mm9:12:4890814-4890835:-] 0.5440 146 7 -5.82 -0.6238 MIMAT0007863 mmu-miR-1902 217379 Ubxn2a uuCA-GUACG--GAUGACGUGGAGa || |:| | ||| ||||||| caGUCCGUACAACUAAAGCACCUCu 2 21 1114 1138 [mm9:12:4891385-4891409:-] 0.5068 150 7 -21.21 -0.7358 MIMAT0007868 mmu-miR-1903 217379 Ubxn2a acagaGUC-CUUCUUCU-UCUUCc ||| | :|:||| ||||| acaugCAGAGUGGGAGACAGAAGu 2 18 47 70 [mm9:12:4887318-4887341:-] 0.5440 124 0 -15.91 -0.1257 MIMAT0007871 mmu-miR-1892 217379 Ubxn2a uaGGAGGGAGGGCAGGGGUUUa ::|:|||:|: ||||||| gaUUUUCCUUCUAGCCCCAAAc 2 21 199 220 [mm9:12:4892303-4892324:-] 0.5011 164 7 -26.47 -0.2095 MIMAT0007874 mmu-miR-1904 217379 Ubxn2a ggAGGGAGGUCUCCUCGUCUug | :||||| | |||||| auUAUCUCCA-AACAGCAGAua 3 21 321 341 [mm9:12:4887047-4887067:-] 0.5714 138 0 -16.88 -0.1046 MIMAT0007874 mmu-miR-1904 217379 Ubxn2a ggagGGAGGUCU---CCUC-GUCUUg | | |||| |||| ||||| uagaCAUGCAGAGUGGGAGACAGAAg 2 19 44 69 [mm9:12:4887319-4887344:-] 0.5440 121 0 -16.18 -0.1994 MIMAT0007874 mmu-miR-1904 217379 Ubxn2a ggAGGGAGGUCUC-CUC-GUCUUg ||::||| | | || ||||| ccUCUUUCCUGUGUAAGCCAGAAg 2 21 452 475 [mm9:12:4892048-4892071:-] 0.5011 123 0 -21.04 -0.2109 MIMAT0009391 mmu-miR-1928 217379 Ubxn2a cucgaccguUACAUCGa :|||||| aauaaaauuGUGUAGCu 2 9 532 548 [mm9:12:4886840-4886856:-] 0.5527 124 6 -9.80 -0.1440 MIMAT0009396 mmu-miR-1933-5p 217379 Ubxn2a uuugAUUCUGGCUUGUGGUACUGa |: ||| | :| ||||||| gaugUGUGACAGUGC-CCAUGACa 2 21 1284 1306 [mm9:12:4891217-4891239:-] 0.5339 154 7 -15.64 -0.1896 MIMAT0009396 mmu-miR-1933-5p 217379 Ubxn2a uuugauucuggcuuguGGUACUGa ||||||| uuauugucugugcuuuCCAUGACa 2 9 7 30 [mm9:12:4892493-4892516:-] 0.5303 140 7 -16.01 -0.6888 MIMAT0009400 mmu-miR-1936 217379 Ubxn2a cggucaagugucguccAGUCAAu |||||| auaaauguuagcuaucUCAGUUu 2 8 347 369 [mm9:12:4887019-4887041:-] 0.5988 120 6 -9.70 -0.1445 MIMAT0009402 mmu-miR-1938 217379 Ubxn2a cuggcUUGAUGUU--CAGGGUGGc |:: |||| ||||||| uugauAGUAACAACCUUCCCACCc 2 18 1041 1064 [mm9:12:4886324-4886347:-] 0.5007 148 7 -15.56 -0.1438 MIMAT0009404 mmu-miR-1940 217379 Ubxn2a uugacGAGGUGGAAGAGUCAGGAGGUa :| || |||:| | ||||||| augacUUGCA-CUUUUGA-UCCUCCAg 2 23 632 656 [mm9:12:4891867-4891891:-] 0.5000 158 7 -21.79 -0.1970 MIMAT0009405 mmu-miR-1941-5p 217379 Ubxn2a uuCGGAGAC-AU--GGUCGU-AGAGGGa |:|| || || | |||| |||||| uuGUCUAUGCUAAGCAAGCACUCUCCCa 2 23 730 757 [mm9:12:4891766-4891793:-] 0.5000 132 6 -20.37 -0.4426 MIMAT0009409 mmu-miR-1944 217379 Ubxn2a uuagucuugaacuGUAAGUC-GUGUCUc ||| ||| |||||| caggugccacaucCAUACAGACACAGAu 2 15 495 522 [mm9:12:4892001-4892028:-] 0.5011 126 6 -15.92 -0.2431 MIMAT0009409 mmu-miR-1944 217379 Ubxn2a uuAGUCUUGAACUGUAAGUCGU-GUCUc | :| |:|||::| :||| |||| cuUGGGCAUUUGGUA-GGGGCAUCAGAu 2 26 1039 1065 [mm9:12:4891458-4891484:-] 0.5089 123 0 -15.40 -0.1117 MIMAT0009409 mmu-miR-1944 217379 Ubxn2a uuagUCUUGA-ACUG-UAAGUCG-UGUCUc || ||| | | | | ||| ||||| agcaAGCACUCUCCCAACUGAGCUACAGAu 2 24 742 771 [mm9:12:4891752-4891781:-] 0.5000 121 0 -10.92 -0.1827 MIMAT0009412 mmu-miR-1946a 217379 Ubxn2a uuuucacacACGGUGGUGACGGGC-CGa ||: :::|:|||||| || aagcaucaaUGUAGUUAUUGCCCGUGCu 2 19 411 438 [mm9:12:4886950-4886977:-] 0.5170 126 0 -23.24 -0.1696 MIMAT0009412 mmu-miR-1946a 217379 Ubxn2a uuuucacacacgGUGG-UGACGGG-CCGa |||: :|||||| ||| caaacaaaaaaaCACUGGCUGCCCUGGCu 2 16 1262 1290 [mm9:12:4886098-4886126:-] 0.5005 122 0 -23.02 -0.1891 MIMAT0009426 mmu-miR-1955 217379 Ubxn2a uuuucgacgUCACGUAGGA-CCCUGa ||| | | || ||||| cagaucaaaAGUUCCUACUAGGGACa 2 17 1061 1086 [mm9:12:4891437-4891462:-] 0.5089 120 0 -12.95 -0.6081 MIMAT0009427 mmu-miR-669n 217379 Ubxn2a ugUGUGUAGGUGUGUGUUUa ::| | |||||||||| auGUAAAAGCACACACAAAa 2 19 711 730 [mm9:12:4886658-4886677:-] 0.5012 158 7 -14.77 -0.8637 MIMAT0009427 mmu-miR-669n 217379 Ubxn2a ugUGUGUAGG--UGUG-UGUUUa |: ||||| :||| ||||| aaAUCCAUCCCAGCACUACAAAa 2 19 670 692 [mm9:12:4886696-4886718:-] 0.5007 125 0 -13.48 -0.9241 MIMAT0009427 mmu-miR-669n 217379 Ubxn2a ugUGUGUAGGUGUGU-GUUUa | |:| | |:||| |||| uuAAAUAGCAAUACAUCAAAa 2 19 370 390 [mm9:12:4886998-4887018:-] 0.5401 122 0 -7.16 -1.2461 MIMAT0009431 mmu-miR-1958 217379 Ubxn2a ugaAUGACGAAGGUGAAAGGAu | | ||||| ||||||| gugUUCCACUUCCUCUUUCCUg 2 20 441 462 [mm9:12:4892061-4892082:-] 0.5011 163 7 -21.27 -0.1659 MIMAT0009435 mmu-miR-1962 217379 Ubxn2a uacACAGGGUCACGGUCGG-AGa |||| :| | :||||| || aauUGUCAUA-UUUCAGCCAUCa 2 20 1349 1370 [mm9:12:4891153-4891174:-] 0.5321 121 0 -14.04 -0.6822 MIMAT0009438 mmu-miR-1965 217379 Ubxn2a acGCGGUGAUGCCGGGC-CGAa :|: ::||: ||||| ||| aaUGUAGUUAUUGCCCGUGCUu 2 20 418 439 [mm9:12:4886949-4886970:-] 0.5170 123 0 -20.09 -0.1591 MIMAT0009440 mmu-miR-1967 217379 Ubxn2a cguaGAAGAGGGGUCCUAGGAGu ||| |:: ||||||| augaCUUGCACUUUUGAUCCUCc 2 20 632 654 [mm9:12:4891869-4891891:-] 0.5000 147 7 -16.65 -0.4173 MIMAT0009446 mmu-miR-1971 217379 Ubxn2a agagUCGGGUCGGAAAUg || | :||||||| gcaaAG-CAGGCCUUUAg 2 15 761 777 [mm9:12:4886611-4886627:-] 0.5010 144 7 -14.13 -0.1365 MIMAT0009458 mmu-miR-1981 217379 Ubxn2a cggUGCAGAUUCGGGUCGGAAAUg ::| | ||| | :||||||| guaGUGGCAAAG-CAGGCCUUUAg 2 22 755 777 [mm9:12:4886611-4886633:-] 0.5010 155 7 -15.69 -0.1338 MIMAT0011222 mmu-miR-2146 217379 Ubxn2a guguaccuuGGGAAGAGGUg |::||||||| uuguauuucCUUUUCUCCAa 2 12 1491 1510 [mm9:12:4885878-4885897:-] 0.5013 147 7 -14.19 -0.7446 MIMAT0011222 mmu-miR-2146 217379 Ubxn2a guguaccuugggaAGAGGUg |||||| cauucaaauauuaUCUCCAa 2 8 312 331 [mm9:12:4887057-4887076:-] 0.5440 120 6 -8.86 -0.1329 MIMAT0012773 mmu-miR-767 217379 Ubxn2a acGAGUC-UGUUGGUACC-ACGu || || | ||: |||| ||| gaCUGAGAAAAAUGAUGGUUGCa 2 20 19 41 [mm9:12:4887347-4887369:-] 0.5440 122 0 -18.12 -0.8137 MIMAT0015640 mmu-miR-3470a 217379 Ubxn2a ggUCGGACCAGAUGUUUCACu || | |||||||||||| ugAGGCCAGUCUACAAAGUGa 2 20 1167 1187 [mm9:12:4886201-4886221:-] 0.5002 171 7 -26.40 -0.3345 MIMAT0015641 mmu-miR-3470b 217379 Ubxn2a ggucggaccagAUGUCUCACu |:||||||| gcaaguagacaUGCAGAGUGg 2 11 39 59 [mm9:12:4887329-4887349:-] 0.5440 146 7 -17.63 -0.1656 MIMAT0015642 mmu-miR-3471 217379 Ubxn2a uuacggaaUGUCAACCUAGAGu :||| ||||||| aggcagagGCAGGAGGAUCUCu 2 15 797 818 [mm9:12:4886570-4886591:-] 0.5010 150 7 -20.20 -0.1067 MIMAT0015643 mmu-miR-3472 217379 Ubxn2a ccaAGGAAGGUCGAAGACCGAUAAu |::|||: | | ||||||| gcaUUUUUCU--CAACAGGCUAUUc 2 23 172 194 [mm9:12:4887194-4887216:-] 0.5440 151 7 -11.61 -0.6925 MIMAT0000125 mmu-miR-23b 217379 Ubxn2a ccauuagggaCCGUUACACUa | |||||||| ggagacagaaGUCAAUGUGAc 2 12 59 79 [mm9:12:4887309-4887329:-] 0.5440 147 7 -11.17 -0.1631 MIMAT0000127 mmu-miR-29b 217379 Ubxn2a uuGUGACUAAAGUUU--ACCACGAu ||||| || | ||||||| ucCACUGCCCACACACUUGGUGCUa 2 22 1195 1219 [mm9:12:4891304-4891328:-] 0.5125 152 7 -20.37 -0.5941 MIMAT0004528 mmu-miR-125a-3p 217379 Ubxn2a ccgagggUUCUUGGAGUGGACa |||| :|||||||| gaagauaAAGAUUCUCACCUG- 2 16 1530 1550 [mm9:12:4885838-4885858:-] 0.5007 163 7 -19.94 -0.8793 MIMAT0000141 mmu-miR-130a 217379 Ubxn2a uaCGGGAAAAU-UGU--AACGUGAc |:|:|| || |:: ||||||| ggGUCUUUAUAUAUGACUUGCACUu 2 21 620 644 [mm9:12:4891879-4891903:-] 0.5000 154 7 -15.72 -0.2263 MIMAT0000147 mmu-miR-135a 217379 Ubxn2a aguGUAUCCUUAUUUUUCGGUAu ::|: |: |:||||||| uccUGUGUAAGCCAGAAGCCAUc 2 21 458 480 [mm9:12:4892043-4892065:-] 0.5011 148 7 -12.38 -0.1675 MIMAT0000149 mmu-miR-137 217379 Ubxn2a gaugcgcaUAAGAAU---UCGUUAUu :||:||| ||||||| cuaucucaGUUUUUAAAUAGCAAUAc 2 16 358 383 [mm9:12:4887005-4887030:-] 0.5401 150 7 -9.35 -0.9568 MIMAT0000149 mmu-miR-137 217379 Ubxn2a gaugcgcAUAAGAAUUC-GUUAUu |||| | || ||||| uuucaaaUAUUAGUUAGCCAAUAu 2 17 212 235 [mm9:12:4887153-4887176:-] 0.5440 120 0 -5.83 -0.8752 MIMAT0000159 mmu-miR-149 217379 Ubxn2a cccuCACUUCUGUGCCUC-GGUCu | ||:|| | |||| |||| agcuGAGAGGAGA-GGAGCCCAGg 2 20 979 1001 [mm9:12:4886387-4886409:-] 0.5007 125 0 -22.52 -0.1396 MIMAT0000165 mmu-miR-155 217379 Ubxn2a uggggaUAGUGUUAAUCGUAAuu |||| || |||||| agcuaaAUCAGCAUCAGCAUUca 3 18 295 317 [mm9:12:4887071-4887093:-] 0.5440 141 0 -10.56 -0.1002 MIMAT0000165 mmu-miR-155 217379 Ubxn2a uggggauaguguuaaUCGUAAUu ||||||| gaauacaccuggucaAGCAUUAc 2 9 1254 1276 [mm9:12:4891247-4891269:-] 0.5358 140 7 -12.46 -0.3142 MIMAT0000209 mmu-miR-129-5p 217379 Ubxn2a cguucggGUCUGGCGUUUUuc || | |||||| aaacaaaCAAAAAGCAAAAca 3 15 1231 1251 [mm9:12:4886137-4886157:-] 0.5002 126 0 -6.73 -0.1296 MIMAT0000212 mmu-miR-183 217379 Ubxn2a ucaCUUAAGAUGGUCAC-GGUAu || | |: ||||| |||| gaaGAUGUGUGACAGUGCCCAUg 2 20 1281 1303 [mm9:12:4891220-4891242:-] 0.5339 123 0 -14.99 -0.1394 MIMAT0000212 mmu-miR-183 217379 Ubxn2a ucaCUUAAGAUG-GUCAC-GGUAu ||||| |:: : ||| |||| agaGAAUUAUGUGUUGUGACCAUa 2 20 1582 1605 [mm9:12:4890918-4890941:-] 0.5213 122 0 -13.88 -0.8521 MIMAT0000215 mmu-miR-186 217379 Ubxn2a ucggGUUUUCCUCUUAAGAAAc ||:| || ||||||| cauaCAGACACAG-AUUCUUUc 2 19 508 528 [mm9:12:4891995-4892015:-] 0.5011 148 7 -7.94 -0.1775 MIMAT0000220 mmu-miR-190 217379 Ubxn2a ugGAUUAUAUAGUUUGU-AUAGu || || |: | |||| |||| uaCUCAUUUGGC-AACAGUAUCc 2 21 490 511 [mm9:12:4886877-4886898:-] 0.5354 122 0 -5.60 -0.4578 MIMAT0000220 mmu-miR-190 217379 Ubxn2a uggauuauAUAGUUUGUAUAGu |:| | ||||||| ggccaucuUGUGAUACAUAUCu 2 15 956 977 [mm9:12:4891546-4891567:-] 0.5044 150 7 -10.81 -0.5634 MIMAT0000223 mmu-miR-193 217379 Ubxn2a ugacCCUGAAACA-UCCGGUCAa ||| ||||| |||||||| agguGGA-UUUGUGAGGCCAGUc 2 19 1156 1177 [mm9:12:4886211-4886232:-] 0.5002 167 7 -24.21 -0.2292 MIMAT0000229 mmu-miR-199a-5p 217379 Ubxn2a cuuguccaucagacUUGUGACCc |||||||| caaacaaacaaaaaAACACUGGc 2 10 1258 1280 [mm9:12:4886108-4886130:-] 0.5005 145 7 -12.76 -0.4526 MIMAT0000247 mmu-miR-143 217379 Ubxn2a cucgauGUCACGAAGUA-GAGu | ||||||||| ||| uauugcCCGUGCUUCAUCCUCg 2 16 426 447 [mm9:12:4886941-4886962:-] 0.5170 131 0 -21.21 -0.3017 MIMAT0000368 mmu-miR-291a-3p 217379 Ubxn2a cguguguuucaccuUCGUGAAa ||||||| uuuaguuuaauccuAGCACUUu 2 9 773 794 [mm9:12:4886594-4886615:-] 0.5010 140 7 -11.42 -0.1859 MIMAT0000372 mmu-miR-294 217379 Ubxn2a uguguguuuucccuUCGUGAAa ||||||| uuuaguuuaauccuAGCACUUu 2 9 773 794 [mm9:12:4886594-4886615:-] 0.5010 140 7 -9.48 -0.1859 MIMAT0000373 mmu-miR-295 217379 Ubxn2a ucugaguuuUCAUCAUCGUGAAa | | |||||||| cuuuaguuuAAUCCUAGCACUUu 2 15 772 794 [mm9:12:4886594-4886616:-] 0.5010 146 7 -11.44 -0.1859 MIMAT0000379 mmu-miR-301a 217379 Ubxn2a cgaAACUGUUAUGAU-AACGUGAc || |: |||: | ||||||| gucUUUAU-AUAUGACUUGCACUu 2 21 622 644 [mm9:12:4891879-4891901:-] 0.5000 153 7 -11.83 -0.2263 MIMAT0000380 mmu-miR-302a 217379 Ubxn2a agugguuuugUACCUUCGUGAAu || ||||||| cuuuaguuuaAUCCUAGCACUUu 2 14 772 794 [mm9:12:4886594-4886616:-] 0.5010 141 7 -11.15 -0.1825 MIMAT0000381 mmu-miR-34c 217379 Ubxn2a cgUUAGUCGAUUGAUGUGACGGa | |:| : | :| ||||||| ugACUUA-UGAUUUCCACUGCCc 2 22 1183 1204 [mm9:12:4891319-4891340:-] 0.5125 147 7 -15.82 -0.1700 MIMAT0000382 mmu-miR-34b-5p 217379 Ubxn2a ugUUAGUCGAUUAAUGUGACGGa | |:| : | || ||||||| ugACUUA-UGAUUUCCACUGCCc 2 22 1183 1204 [mm9:12:4891319-4891340:-] 0.5125 151 7 -15.61 -0.1700 MIMAT0000385 mmu-miR-106a 217379 Ubxn2a gauggACGUGACAAUCGUGAAAc | :| | ||||||||| uuuagUUUAAUCCUAGCACUUUg 2 19 773 795 [mm9:12:4886593-4886615:-] 0.5010 154 7 -14.87 -0.1415 MIMAT0000385 mmu-miR-106a 217379 Ubxn2a gauggacgugacaAUCGUGAAAc | ||||||| cuuuauauaugacUUGCACUUUu 2 11 624 646 [mm9:12:4891877-4891899:-] 0.5000 142 7 -11.64 -0.3824 MIMAT0000386 mmu-miR-106b 217379 Ubxn2a uagACGUGACAGUCGUGAAAu | :| | :|||||||| uagUUUAAUCCUAGCACUUUg 2 19 775 795 [mm9:12:4886593-4886613:-] 0.5010 150 7 -12.32 -0.1415 MIMAT0000386 mmu-miR-106b 217379 Ubxn2a uaGACGUG-ACAG-UCGUGAAAu :| :|: || | ||||||| cuUUAUAUAUGACUUGCACUUUu 2 20 624 646 [mm9:12:4891877-4891899:-] 0.5000 141 7 -10.37 -0.3824 MIMAT0000387 mmu-miR-130b 217379 Ubxn2a uaCGGGAA-A-GUAGU-AACGUGAc |:|:|| | :|| | ||||||| ggGUCUUUAUAUAUGACUUGCACUu 2 21 620 644 [mm9:12:4891879-4891903:-] 0.5000 153 7 -14.86 -0.2263 MIMAT0000529 mmu-miR-20a 217379 Ubxn2a gaUGGACGUGAUAU-----UCGUGAAAu :||| :| | || |||||||| agGCCUUUAGUUUAAUCCUAGCACUUUg 2 22 768 795 [mm9:12:4886593-4886620:-] 0.5010 148 7 -14.70 -0.1402 MIMAT0000529 mmu-miR-20a 217379 Ubxn2a gaUGGACGUG-AUAUU---CGUGAAAu ::|| :|: |||:| ||||||| ggGUCUUUAUAUAUGACUUGCACUUUu 2 22 620 646 [mm9:12:4891877-4891903:-] 0.5000 151 7 -12.62 -0.3824 MIMAT0000532 mmu-miR-23a 217379 Ubxn2a ccuuuagggaCCGUUACACUa | |||||||| ggagacagaaGUCAAUGUGAc 2 12 59 79 [mm9:12:4887309-4887329:-] 0.5440 147 7 -13.35 -0.1631 MIMAT0000535 mmu-miR-29a 217379 Ubxn2a auuggcuaaaGUCUACCACGAu || ||||||| acugcccacaCACUUGGUGCUa 2 13 1198 1219 [mm9:12:4891304-4891325:-] 0.5358 144 7 -16.23 -0.6431 MIMAT0000536 mmu-miR-29c 217379 Ubxn2a auuggcuaaaGUUUACCACGAu || ||||||| acugcccacaCACUUGGUGCUa 2 13 1198 1219 [mm9:12:4891304-4891325:-] 0.5358 144 7 -16.15 -0.6431 MIMAT0000540 mmu-miR-93 217379 Ubxn2a gauggacgugcuuGUCGUGAAAc :|||||||| uuuaguuuaauccUAGCACUUUg 2 11 773 795 [mm9:12:4886593-4886615:-] 0.5010 146 7 -15.16 -0.1429 MIMAT0000540 mmu-miR-93 217379 Ubxn2a gauggACGUGCUUGUCGUGAAAc | :|:|| : ||||||| cuuuaUAUAUGACUUGCACUUUu 2 19 624 646 [mm9:12:4891877-4891899:-] 0.5000 154 7 -12.83 -0.3854 MIMAT0000542 mmu-miR-34a 217379 Ubxn2a ugUUGG--UCGAUUCU----GUGACGGu ||:| | :|| || ||||||| aaAAUCUGACUUAUGAUUUCCACUGCCc 2 21 1177 1204 [mm9:12:4891319-4891346:-] 0.5125 142 7 -14.80 -0.1700 MIMAT0004651 mmu-miR-340-5p 217379 Ubxn2a uuagucaGAGUAACGAAAUAUu ||: ||||||||| uaggccgCUUUGUGCUUUAUAa 2 16 1328 1349 [mm9:12:4891174-4891195:-] 0.5321 155 7 -14.22 -0.5715 MIMAT0004651 mmu-miR-340-5p 217379 Ubxn2a uuAGUCAGAGUAACGAAAUAUu |:|| | : | ||||||| uuUUAGGCAGGGU-CUUUAUAu 2 21 611 631 [mm9:12:4891892-4891912:-] 0.5000 146 7 -10.30 -0.3319 MIMAT0000612 mmu-miR-135b 217379 Ubxn2a aguGUAUCCUUACUUUUCGGUAu ::|: |: |:||||||| uccUGUGUAAGCCAGAAGCCAUc 2 21 458 480 [mm9:12:4892043-4892065:-] 0.5011 148 7 -12.38 -0.1675 MIMAT0000649 mmu-miR-17 217379 Ubxn2a gaUGGACGUGACAU-----UCGUGAAAc :||| :| | || |||||||| agGCCUUUAGUUUAAUCCUAGCACUUUg 2 22 768 795 [mm9:12:4886593-4886620:-] 0.5010 148 7 -16.33 -0.1415 MIMAT0000649 mmu-miR-17 217379 Ubxn2a gaUGGACGUG-ACAUU---CGUGAAAc ::|| :|: | |:| ||||||| ggGUCUUUAUAUAUGACUUGCACUUUu 2 22 620 646 [mm9:12:4891877-4891903:-] 0.5000 143 7 -11.52 -0.3824 MIMAT0000657 mmu-miR-200c 217379 Ubxn2a agGUAGUAAUGG---GCCGUC-AUAAu :||:|| || | |||| |||| aaUAUUAUCUCCAAACAGCAGAUAUUu 2 22 318 344 [mm9:12:4887044-4887070:-] 0.5714 120 0 -12.89 -0.8121 MIMAT0000663 mmu-miR-218 217379 Ubxn2a uguACCAAUCUA-GUUCGUGUu | || | :| ||||||| aauUUGUAAUGUAAAAGCACAc 2 19 703 724 [mm9:12:4886664-4886685:-] 0.5012 145 7 -7.77 -0.7845 MIMAT0000669 mmu-miR-221 217379 Ubxn2a cuuuGGGUCGUCUGU---UACAUCGa |:|:| | | | :|||||| ucuuCUCGGAAUAAAAUUGUGUAGCu 2 20 523 548 [mm9:12:4886840-4886865:-] 0.5440 130 6 -16.22 -0.1373 MIMAT0000670 mmu-miR-222 217379 Ubxn2a ugggucaucggucUACAUCGa :|||||| ucggaauaaaauuGUGUAGCu 2 9 528 548 [mm9:12:4886840-4886860:-] 0.5440 124 6 -11.79 -0.1359 MIMAT0000671 mmu-miR-224 217379 Ubxn2a uugCCUUGGUGAUCACUGAAu ||:| :| | ||||||| cgaGGGAGUAGUUGUGACUUa 2 19 1628 1648 [mm9:12:4890875-4890895:-] 0.5039 158 7 -18.56 -0.6663 MIMAT0000741 mmu-miR-377 217379 Ubxn2a uguuuucaacggaaACACACUa ||||||| auuacugucgaagaUGUGUGAc 2 9 1272 1293 [mm9:12:4891230-4891251:-] 0.5339 140 7 -11.31 -0.1138 MIMAT0000747 mmu-miR-382 217379 Ubxn2a gcuuAGGUGGUGCUUGU-UGAAg |||||::| ||| |||| gauuUCCACUGCCCACACACUUg 2 19 1191 1213 [mm9:12:4891310-4891332:-] 0.5125 130 0 -13.99 -0.2224 MIMAT0000748 mmu-miR-383 217379 Ubxn2a ucgGUGUCAGUGGAAGACUAGa | || |:| |||||||| uaaCCCAUUUA--UUCUGAUCu 2 20 310 329 [mm9:12:4892194-4892213:-] 0.5011 152 7 -16.32 -0.7150 MIMAT0001076 mmu-miR-384-3p 217379 Ubxn2a uaacacuuguuaAAGAUCCUUa | ||||||| ugacauuucuccUGCUAGGAAg 2 11 64 85 [mm9:12:4892438-4892459:-] 0.5091 142 7 -11.74 -0.1141 MIMAT0004750 mmu-miR-425 217379 Ubxn2a aguugcccUCACUAGCACAGUAa | | : :||||||| ugacauuaAAUAGCUGUGUCAUu 2 16 235 257 [mm9:12:4887131-4887153:-] 0.5440 143 7 -11.43 -0.8551 MIMAT0001418 mmu-miR-431 217379 Ubxn2a acGUA-CUGCCGGACGUUCUGu ||| | |::|||||||| ggCAUAUAAAGUUUGCAAGACc 2 20 902 923 [mm9:12:4891600-4891621:-] 0.5000 154 7 -19.38 -0.3836 MIMAT0001420 mmu-miR-433 217379 Ubxn2a uguggcuccucggGUAGUACua :|||||| cacgcagacaaaaUAUCAUGca 3 10 1417 1438 [mm9:12:4885950-4885971:-] 0.5009 121 0 -12.00 -0.1145 MIMAT0001542 mmu-miR-449a 217379 Ubxn2a uggucGAUUGUU--AUGUGACGGu || |::| | ||||||| ucugaCUUAUGAUUUCCACUGCCc 2 18 1181 1204 [mm9:12:4891319-4891342:-] 0.5125 148 7 -16.21 -0.1684 MIMAT0003112 mmu-miR-489 217379 Ubxn2a cgACGGU-AUAUA-CACCACAGUAa || || || || | ||||||| uaUGACAUUAAAUAGCUGUGUCAUu 2 22 233 257 [mm9:12:4887131-4887155:-] 0.5440 155 7 -12.58 -0.8446 MIMAT0003168 mmu-miR-543 217379 Ubxn2a uucuucACGUGGCGCUUACAAa | ||: ||||||| aagcuuUACAUAUAGAAUGUUc 2 17 1395 1416 [mm9:12:4891107-4891128:-] 0.5321 144 7 -10.20 -0.6149 MIMAT0003168 mmu-miR-543 217379 Ubxn2a uucuUCAC---GUGGCGCUUA-CAAa |||| |||| |||| ||| ucuuAGUGCUACACCAAGAAUCGUUu 2 19 1730 1755 [mm9:12:4890768-4890793:-] 0.6071 121 0 -15.46 -0.5351 MIMAT0003169 mmu-miR-539 217379 Ubxn2a ugugugguuccuauUAAAGAGg ||||||| auauauaacuugacAUUUCUCc 2 9 54 75 [mm9:12:4892448-4892469:-] 0.5091 140 7 -12.84 -0.2418 MIMAT0003187 mmu-miR-20b 217379 Ubxn2a gauggACGUGAUACUCGUGAAAc | :| | |||||||| uuuagUUUAAUCCUAGCACUUUg 2 19 773 795 [mm9:12:4886593-4886615:-] 0.5010 146 7 -14.86 -0.1402 MIMAT0003187 mmu-miR-20b 217379 Ubxn2a gaUGGACGUG-AUACU---CGUGAAAc ::|| :|: ||||| ||||||| ggGUCUUUAUAUAUGACUUGCACUUUu 2 22 620 646 [mm9:12:4891877-4891903:-] 0.5000 155 7 -14.16 -0.3824 MIMAT0003374 mmu-miR-302b 217379 Ubxn2a gaugauuuugUACCUUCGUGAAu || ||||||| cuuuaguuuaAUCCUAGCACUUu 2 14 772 794 [mm9:12:4886594-4886616:-] 0.5010 141 7 -9.93 -0.1825 MIMAT0003377 mmu-miR-302d 217379 Ubxn2a ugUGAGUUUGUACCUUCGUGAAu ::|:|| | | ||||||| uaGUUUAAUCCU---AGCACUUu 2 22 775 794 [mm9:12:4886594-4886613:-] 0.5010 145 7 -9.83 -0.1695 MIMAT0004186 mmu-miR-301b 217379 Ubxn2a cgaAACUGUUAUGGU-AACGUGAc || |: |||: | ||||||| gucUUUAU-AUAUGACUUGCACUu 2 21 622 644 [mm9:12:4891879-4891901:-] 0.5000 153 7 -12.11 -0.2263 MIMAT0003889 mmu-miR-758 217379 Ubxn2a auCAC-CUGGUCCAG-UGUUu ||| |:||| ||| |||| uuGUGAGGCCA-GUCUACAAa 2 18 1164 1183 [mm9:12:4886205-4886224:-] 0.5002 122 0 -19.74 -0.2299 MIMAT0003738 mmu-miR-496 217379 Ubxn2a cucuaaccgguacaUUAUGAGu ||||||| gcaaaagauacucaAAUACUCa 2 9 474 495 [mm9:12:4886893-4886914:-] 0.5354 140 7 -12.40 -0.9017 MIMAT0003738 mmu-miR-496 217379 Ubxn2a cucuaaccgguacAUUAUGAGu |||||||| aaacucccagaaaUAAUACUCa 2 10 217 238 [mm9:12:4892285-4892306:-] 0.5011 145 7 -13.93 -0.9430 MIMAT0003450 mmu-miR-488 217379 Ubxn2a cugGUUCUUUGUCGGAAAGUu ||| ||| | ||||||| cuaCAA-AAAAAUCCUUUCAa 2 19 685 704 [mm9:12:4886684-4886703:-] 0.5010 160 7 -13.22 -1.1976 MIMAT0003450 mmu-miR-488 217379 Ubxn2a cuGGUUCUUUGUCGGAAAGUu :| ||: ::| ||||||| guUCUAGGUGUA-CCUUUCAa 2 20 1413 1432 [mm9:12:4891091-4891110:-] 0.5321 149 7 -15.15 -0.9909 MIMAT0003460 mmu-miR-449c 217379 Ubxn2a ggucgaucguuACGUGACGGa | ||||||| gacuuaugauuUCCACUGCCc 2 11 1184 1204 [mm9:12:4891319-4891339:-] 0.5125 142 7 -13.16 -0.1684 MIMAT0003515 mmu-miR-721 217379 Ubxn2a aagggggAAAAUUAACGUGAc | | | ||||||| cuuuauaUAUGACUUGCACUu 2 15 624 644 [mm9:12:4891879-4891899:-] 0.5000 146 7 -8.23 -0.2304 MIMAT0003780 mmu-miR-490 217379 Ubxn2a guCGUACCUCAGGAGGUCCAAc || || || |||||||| ugGC-UGUAG--AUCCAGGUUc 2 21 1286 1304 [mm9:12:4886084-4886102:-] 0.5009 147 7 -17.25 -0.2227 MIMAT0004324 mmu-miR-181d 217379 Ubxn2a uggguggcuGUUGUUAC-UUACAa ||| |||| ||||| ccuuuucucCAAAAAUGUAAUGUc 2 15 1499 1522 [mm9:12:4885866-4885889:-] 0.5013 126 0 -10.81 -0.7898 MIMAT0004852 mmu-miR-190b 217379 Ubxn2a uuggguuAUAGUUUGUAUAGu |:| | ||||||| gccaucuUGUGAUACAUAUCu 2 15 957 977 [mm9:12:4891546-4891566:-] 0.5044 150 7 -13.39 -0.5706 MIMAT0004853 mmu-miR-874 217379 Ubxn2a agccaGGGAGCC--CGGUC-CCGUc | ||||| | ||| |||| cccagCACUCGGGAGGCAGAGGCAg 2 18 1133 1157 [mm9:12:4886231-4886255:-] 0.5002 120 0 -28.38 -0.1312 MIMAT0004859 mmu-miR-193b 217379 Ubxn2a ucgcCCUGAAACAC-CCGGUCAa ||| |||||| ||||||| agguGGA-UUUGUGAGGCCAGUc 2 19 1156 1177 [mm9:12:4886211-4886232:-] 0.5002 167 7 -28.09 -0.2292 MIMAT0004889 mmu-miR-504 217379 Ubxn2a cuauCUCACGUCUGGUCCCAGa |: | :| :|||||||| acauGGCUCUAAGCCAGGGUCa 2 19 148 169 [mm9:12:4887219-4887240:-] 0.5440 154 7 -19.46 -0.3218 MIMAT0004889 mmu-miR-504 217379 Ubxn2a cuaucucACGUCUGGUCCCAGa | :||: ||||||| uauuuguUUUAGG-CAGGGUCu 2 16 605 625 [mm9:12:4891898-4891918:-] 0.5000 145 7 -18.05 -0.4204 MIMAT0004896 mmu-miR-590-3p 217379 Ubxn2a ugaucGAAUA--UGUAUUUUAAu ||| | : |||||||| agacuCUUCUCGGAAUAAAAUUg 2 17 519 541 [mm9:12:4886847-4886869:-] 0.5440 147 7 -7.06 -0.5283 MIMAT0005447 mmu-miR-449b 217379 Ubxn2a cggucgauuguuGUGACGGa ||||||| acuuaugauuucCACUGCCc 2 9 1185 1204 [mm9:12:4891319-4891338:-] 0.5125 140 7 -14.75 -0.1700 MIMAT0004943 mmu-miR-653 217379 Ubxn2a guCA-UCUC-UAACAA-AGUUGUg || || | ||| || |||||| ggGUCAGUGCAUUUUUCUCAACAg 2 20 164 187 [mm9:12:4887201-4887224:-] 0.5440 125 6 -10.59 -0.5969 MIMAT0005850 mmu-miR-1192 217379 Ubxn2a uuAAACCAGACA--AACAA-ACAAa |||| |:||| ||| |||| ucUUUGCUUUGUGGAAGUUAUGUUg 2 21 162 186 [mm9:12:4892337-4892361:-] 0.4995 123 0 -8.23 -0.4862

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G040528 Ubxn2a Mus musculus 217379

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ubxd4 mcmv-miR-M44-1 beg:465 end:484 pic:3' TGGCGCCGAGACCTTTTTCTAT 5'& ..|.| ||| |||||||| &5' -TTGTGA---TGGCAAAAGATA 3' Ubxd4 mmu-miR-669n beg:717 end:730 pic:3' TGTGTGTAGGTGTGTGTTTA 5'& |||||||||| &5' ---------CACACACAAA- 3' Ubxd4 mmu-miR-199bstar beg:1268 end:1280 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||||||||| &5' -------------AAACACTGG- 3' Ubxd4 mmu-miR-297b-5p beg:1405 end:1419 pic:3' TGTACAAGTACGTGTGTATGTA 5'& |.| ||||||| &5' ----------GTAGACATACA- 3' Ubxd4 mmu-miR-297b-5p beg:642 end:659 pic:3' TGTACAAGTAC-GTGTGTATGTA 5'& || ||.|||||||| &5' ---------TGCCATACATACAT 3' Ubxd4 mmu-miR-1194 beg:908 end:925 pic:3' TCCTAGATCGTCAATGAGTAAG 5'& |||| |||||||||. &5' ---ATCT-----TTACTCATTT 3' Ubxd4 mmu-miR-466k beg:708 end:728 pic:3' AGTGTACATGTACATGTGTGTGT 5'& ||||| .|||||||| &5' ----ATGTAAAA--GCACACACA 3' Ubxd4 mmu-miR-1186 beg:676 end:687 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||| &5' -------------CCAGCACT- 3' Ubxd4 mmu-miR-504 beg:150 end:169 pic:3' CTATCTCACGTC---TGGTCCCAGA 5'& || .|||||||| &5' --------GCTCTAAGCCAGGGTC- 3' Ubxd4 mmu-miR-151-3p beg:1165 end:1180 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& ||| | ||||||| &5' -------GAGGC-CAGTCTA- 3' Ubxd4 mmu-miR-1186 beg:1121 end:1143 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||||||||| ||||||||| &5' ---GCCTTTAATCCCAGCACTC 3' Ubxd4 mmu-miR-488 beg:685 end:705 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||| ||| |||||||| &5' ---CAAAAAAAT-CCTTTCAA 3' Ubxd4 mghv-miR-M1-3 beg:1540 end:1549 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& ||||||| &5' --------------CTCACCT- 3' Ubxd4 mmu-miR-140star beg:1370 end:1389 pic:3' GGCACCAAGA-TGG-GACACCAT 5'& |||| .|| ||||||| &5' ------TTCTGGCCTCTGTGGT- 3' Ubxd4 mmu-miR-668 beg:133 end:151 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& || .| |||||||| &5' --------GCTAGGA-GAGTGACA 3' Ubxd4 mmu-miR-1971 beg:1114 end:1131 pic:3' AGAGTCGGGT-CGGAAATG 5'& .|| || ||||||| &5' ----GGCGCACGCCTTTA- 3' Ubxd4 mmu-miR-1971 beg:762 end:777 pic:3' AGAGTCGGGTCGGAAATG 5'& ||| .||||||| &5' ----AGCA-GGCCTTTA- 3' Ubxd4 mmu-miR-3471 beg:802 end:818 pic:3' TTACGGAATGTCAACCTAGAGT 5'& .||| ||||||| &5' --------GCAGGAGGATCTC- 3' Ubxd4 mmu-miR-744star beg:495 end:507 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||||||||| &5' -------------TGGCAACAG 3' Ubxd4 mmu-miR-345-5p beg:161 end:172 pic:3' TTCGTGACCTGATCCCCAGTCG 5'& |||||||. &5' --------------GGGTCAGT 3' Ubxd4 mmu-miR-2183 beg:114 end:127 pic:3' TCCTCCAGTCCCCAAGTT 5'& .||||||||. &5' --------GGGGGTTCAG 3' Ubxd4 mmu-miR-425 beg:246 end:258 pic:3' AGTTGCCCTCACTAGCACAGTAA 5'& .|||||||| &5' --------------TGTGTCATT 3' Ubxd4 mmu-miR-292-5p beg:81 end:97 pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& |.. |.||||||| &5' --------CTTGCGGTTTGAG- 3' Ubxd4 mmu-miR-293star beg:84 end:97 pic:3' GTTTTACAGTGTGTCAAACTCA 5'& .|.||||||| &5' -----------GCGGTTTGAG- 3' Ubxd4 mcmv-miR-m108-1 beg:181 end:200 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& || ||.|. ||||||| &5' ----ACAGGCTAT--TCAGAAA 3' Ubxd4 mcmv-miR-m88-1star beg:995 end:1012 pic:3' GGCTACAGTCCCCCAGCCAGTA 5'& |||| | |.||||| &5' -------CAGGAGTTTGGTCA- 3' Ubxd4 mcmv-miR-m88-1star beg:1371 end:1391 pic:3' GGCTACAGTCCCCCA--GCCAGTA 5'& || || .||||| &5' ------TCTGGCCTCTGTGGTCA- 3' Ubxd4 mghv-miR-M1-6 beg:440 end:463 pic:3' TTTTGGTGGAGTGT------GTCAAAGT 5'& ||||. | ||||||| &5' -------CCTCGGAGCTTTTCAGTTTC- 3' Ubxd4 mghv-miR-M1-9 beg:61 end:79 pic:3' TTTTTCCAGGTC--CGTTTACACT 5'& ||| |. ||||||| &5' ---------CAGAAGTCAATGTGA 3' Ubxd4 mmu-let-7b beg:354 end:366 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .|||.|||| &5' -------------GCTATCTCA 3' Ubxd4 mmu-let-7c beg:555 end:578 pic:3' TTGG-TATG-TTGGATG-ATGGAGT 5'& |.| |||| ||.|||. ||| &5' -ATCAATACTAATCTATATAC---- 3' Ubxd4 mmu-let-7c beg:354 end:366 pic:3' TTGGTATGTTGGATGATGGAGT 5'& .|||.|||| &5' -------------GCTATCTCA 3' Ubxd4 mmu-let-7d beg:348 end:365 pic:3' TTGATACGTTGGATGATGGAGA 5'& |||. .|||.||| &5' ----ATGTTA---GCTATCTC- 3' Ubxd4 mmu-let-7e beg:355 end:366 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |||.|||| &5' --------------CTATCTCA 3' Ubxd4 mmu-let-7istar beg:745 end:770 pic:3' TCGTT-CCGTCATCGAACGCGTC 5'& .| . ||.|||.|| |||| &5' GGTGGTGGTAGTGGCAAA-GCAG 3' Ubxd4 mmu-miR-106a beg:783 end:796 pic:3' GATGGACGTGACAATCGTGAAAC 5'& |||||||||| &5' -------------TAGCACTTTG 3' Ubxd4 mmu-miR-1186 beg:775 end:794 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||| |.||||||. &5' ------TTTAATCCTAGCACTT 3' Ubxd4 mmu-miR-1186b beg:244 end:265 pic:3' CACCACG-TACGGAAATTAGGGT 5'& || .||.| ||||||..| &5' -----GCTGTGTCATTAATCTTA 3' Ubxd4 mmu-miR-1186b beg:1112 end:1137 pic:3' CACCACGTACGGAAATTAGGGT 5'& |||| ||| ||||||||||||| &5' GTGGCGCACGCCTTTAATCCCA 3' Ubxd4 mmu-miR-1186b beg:755 end:788 pic:3' CACCA---CGTACGGA-----AATTAGGGT 5'& |||| ||| |||| |||||||.| &5' GTGGCAAAGCAGGCCTTTAGTTTAATCCTA 3' Ubxd4 mmu-miR-1188 beg:956 end:979 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||| ||.| | ||||||||| &5' -CCTAGCTCTAGCTCACACCA 3' Ubxd4 mmu-miR-1190 beg:1068 end:1087 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& |.||| || |||||||| &5' -ATAGATGG----CTCAGCTG- 3' Ubxd4 mmu-miR-1190 beg:795 end:821 pic:3' CTGTCTCC--CCTTGGAGTCGACT 5'& |.|||||| |||. || |||| &5' GGCAGAGGCAGGAGGATCT-CTGA 3' Ubxd4 mmu-miR-1194 beg:477 end:499 pic:3' TCCTAGATCGTCAATGAGTAAG 5'& ||| || ||||||||. &5' --GATACT-CAAATACTCATTT 3' Ubxd4 mmu-miR-1196 beg:1143 end:1166 pic:3' TCCGTCTCCGTCCATCTAAA 5'& ||||||||||||||.||||| &5' AGGCAGAGGCAGGTGGATTT 3' Ubxd4 mmu-miR-1196 beg:794 end:815 pic:3' TCCGTCTCCGTCCATCTAAA 5'& ||||||||||||| .||| &5' AGGCAGAGGCAGGAGGAT-- 3' Ubxd4 mmu-miR-1197 beg:824 end:842 pic:3' TCTTCATCTGGTACACAGGAT 5'& .||| ||||||| &5' ------GGACAGCCTGTCCTA 3' Ubxd4 mmu-miR-125a-3p beg:1534 end:1549 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& |||| |||||||| &5' -------AAGATTCTCACCTG- 3' Ubxd4 mmu-miR-125a-3p beg:1080 end:1102 pic:3' CCGAGGGTTCTTG-GAGTGGACA 5'& ||| ..|||||| || .|. &5' -GCTGTTAAGAACACTGGCT--- 3' Ubxd4 mmu-miR-129-5p beg:672 end:694 pic:3' CGTTCGGGTC-TGGCGTTTTTC 5'& || ||||| || |||||| &5' -CAT-CCCAGCACTACAAAAA- 3' Ubxd4 mmu-miR-134 beg:1376 end:1407 pic:3' GGGGAGACCAGT--TGG----TCAGTGT 5'& ||.|| |||||| .| |||.|.| &5' CCTCTGTGGTCACTGCACTCAAGTTATA 3' Ubxd4 mmu-miR-135a beg:1316 end:1340 pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& |||||.| |.|. | ||||||| &5' -CACATGGCAGTGCACAGCCATA 3' Ubxd4 mmu-miR-135b beg:1317 end:1340 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& |||||.| |.|| ||||||| &5' -CACATGGCAGTGCACAGCCATA 3' Ubxd4 mmu-miR-139-5p beg:1276 end:1296 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| .| | || .||||||| &5' -TGGCTGC-CCTG-GCTGTAGA 3' Ubxd4 mmu-miR-142-3p beg:1452 end:1478 pic:3' AGGTATTTCATCCTTTGT-GATGT 5'& |.|| .||| ||||| | .||.| &5' TTCAACGAGT-GGAAAGATTTATA 3' Ubxd4 mmu-miR-142-3p beg:127 end:151 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& .|| ||. |||||.| ||| &5' -TCACAAGCTAGGAGAGTG-ACA 3' Ubxd4 mmu-miR-143 beg:161 end:184 pic:3' CTCGATGTCACG-AAGTAGAGT 5'& |.|. |||||| ||. ||||| &5' GGGT--CAGTGCATTTTTCTCA 3' Ubxd4 mmu-miR-144 beg:547 end:567 pic:3' TCATGTAGTAGATATGACAT 5'& ||||.| .||| ||||| &5' AGTATAATATCAATACT--- 3' Ubxd4 mmu-miR-145 beg:731 end:750 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||||.| |||.||||. &5' ----ATTCTTC--AAAGCTGGG- 3' Ubxd4 mmu-miR-145star beg:985 end:1005 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .|||. || ||||||.| &5' -GAGAGGAGC----CCAGGAGT 3' Ubxd4 mmu-miR-146a beg:360 end:373 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& ||||||.|.| &5' ------------TCAGTTTTTA 3' Ubxd4 mmu-miR-146a beg:565 end:587 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& ||.|.|| |||||.|| &5' AATCTATATACA-CAGTTTTC- 3' Ubxd4 mmu-miR-146a beg:891 end:910 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |.|| ||| ||||.||| &5' ---CTATAGAAA--AGTTTTCA 3' Ubxd4 mmu-miR-146b beg:353 end:373 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||. | ||||||.|.| &5' AGCT-----ATCTCAGTTTTTA 3' Ubxd4 mmu-miR-146b beg:890 end:910 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||| ||| ||||.||| &5' ---CTATAGAAA--AGTTTTCA 3' Ubxd4 mmu-miR-150 beg:47 end:64 pic:3' GTGACCATGTTCCCAACCCTCT 5'& |.||. ||||||| &5' ------TGCAGAG--TGGGAGA 3' Ubxd4 mmu-miR-151-3p beg:761 end:782 pic:3' GGAGTTCC-TCGG-AGTCAGATC 5'& ||| .||| |.|||.|| &5' ----AAGCAGGCCTTTAGTTTA- 3' Ubxd4 mmu-miR-151-5p beg:515 end:532 pic:3' TGATCTGACACTCGAGGAGCT 5'& |||||| ||.||||. &5' --TAGACT-----CTTCTCGG 3' Ubxd4 mmu-miR-17 beg:701 end:723 pic:3' GATGGACGTGACAT--TCGTGAAAC 5'& |..||.| |||| ||||| &5' --ATTTGTAATGTAAAAGCAC---- 3' Ubxd4 mmu-miR-17star beg:1275 end:1295 pic:3' GATGTTC-ACGGGAGTGACGTCA 5'& .| |||||| .|||.|| &5' -----GGCTGCCCTGGCTGTAG- 3' Ubxd4 mmu-miR-183 beg:390 end:407 pic:3' TCACTTAAGAT-GGTCACGGTAT 5'& .|| ||| ||||||| &5' --------TTATCCA-TGCCATA 3' Ubxd4 mmu-miR-1839-5p beg:447 end:468 pic:3' GTTCTGGACAAGAT--AGATGGAA 5'& || || ||| |||||.| &5' ---GAGCTTTTCAGTTTCTACTT- 3' Ubxd4 mmu-miR-185 beg:1492 end:1510 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |.| || ||.|||||| &5' ------ATTTCC-TTTTCTCCA 3' Ubxd4 mmu-miR-187 beg:32 end:52 pic:3' GGCCGACGTTGTGTTCTGTGCT 5'& .||.||||| |||||.| &5' -TGGTTGCAAGT--AGACATG- 3' Ubxd4 mmu-miR-1896 beg:1197 end:1217 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& || . |.|| |||||| &5' --CCAGGGCTACA--CAGAGA- 3' Ubxd4 mmu-miR-1896 beg:854 end:875 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& ||| . ..|| |||||| &5' -TCCAGGGTTACA--CAGAGA- 3' Ubxd4 mmu-miR-1897-5p beg:909 end:928 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& ||||| .|||..||| &5' -----TCTTTACTCATTTAAA- 3' Ubxd4 mmu-miR-1902 beg:420 end:447 pic:3' TTCAGT-ACGG--ATGACGT-GGAGA 5'& |||.| |||| |.|| || |||| &5' -AGTTATTGCCCGTGCTTCATCCTC- 3' Ubxd4 mmu-miR-190 beg:1426 end:1444 pic:3' TGGATTATATAGTTTGTATAGT 5'& |||||| .|||||.| &5' -------ATATCATGCATATTA 3' Ubxd4 mmu-miR-1904 beg:788 end:811 pic:3' GGAGGGAGGTCTCC----TCGTCTTG 5'& ||. |||| .||||.| &5' -----CTTTGGAGGCAGAGGCAGGA- 3' Ubxd4 mmu-miR-1928 beg:409 end:427 pic:3' CTCGACCGTTACATCGA 5'& ||| ||||||||.| &5' -AGCAT-CAATGTAGTT 3' Ubxd4 mmu-miR-1928 beg:608 end:628 pic:3' CTC-GACCGTTACATCGA 5'& .| |||| |||||||.| &5' -GGACTGGGAATGTAGTT 3' Ubxd4 mmu-miR-193 beg:1155 end:1177 pic:3' TGAC-CCTGAAACATCCGGTCAA 5'& | |||.|| |||||||| &5' ---GTGGATTTGTGAGGCCAGT- 3' Ubxd4 mmu-miR-1938 beg:1044 end:1064 pic:3' CTGGC-TTGATGTTCAGGGTGGC 5'& | ||| || ||||||| &5' ----GTAACAACCT-TCCCACC- 3' Ubxd4 mmu-miR-193b beg:1157 end:1177 pic:3' TCGCCCTGAAACAC-CCGGTCAA 5'& |.|| |||||| ||||||| &5' -GTGGA--TTTGTGAGGCCAGT- 3' Ubxd4 mmu-miR-193b beg:161 end:172 pic:3' TCGCCCTGAAACACCCGGTCAA 5'& |||.|||| &5' -------------GGGTCAGT- 3' Ubxd4 mmu-miR-1948 beg:868 end:888 pic:3' GACATGCTCAC-GAGACGGATTT 5'& ||| | |||.|||.| &5' ------GAGAAACCCTGTCTAGA 3' Ubxd4 mmu-miR-1950 beg:500 end:522 pic:3' ACTGGTATAGGAATCTACGTCT 5'& || .||||| |||||.||| &5' --ACAGTATCCA-AGATGTAGA 3' Ubxd4 mmu-miR-1961 beg:354 end:366 pic:3' AAGATTGATGATGGAGT 5'& .|||.|||| &5' --------GCTATCTCA 3' Ubxd4 mmu-miR-1967 beg:169 end:196 pic:3' CGT-AGAAGAGGGGTCCTAGGAGT 5'& ||| |.||||| |||| .||| &5' GCATTTTTCTCAACAGGCTATTCA 3' Ubxd4 mmu-miR-1968 beg:235 end:252 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |||. ||.|||||. &5' -------CATTA--AATAGCTGT- 3' Ubxd4 mmu-miR-196a beg:675 end:700 pic:3' GGGTTGT--TGTACTTTGATGGAT 5'& ||||.|| ||| ||| ||| &5' CCCAGCACTACAAAAAAAT-CCT- 3' Ubxd4 mmu-miR-196b beg:675 end:700 pic:3' GGGTTGT--TGTCCTTTGATGGAT 5'& ||||.|| ||| ||| ||| &5' CCCAGCACTACAAAAAAAT-CCT- 3' Ubxd4 mmu-miR-1970 beg:1026 end:1047 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& ||| |||.||.|. |||.| &5' -AAACCCTGTCTCT--TGATA-- 3' Ubxd4 mmu-miR-1970 beg:131 end:152 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& ||||. |||||||. &5' --AAGCTAGGAG--AGTGACAT- 3' Ubxd4 mmu-miR-199a-5p beg:1078 end:1100 pic:3' CTTGTCCATCAGA-CTTGTGACCC 5'& ||| ||. ||||||||| &5' ---CAGCT-GTTAAGAACACTGG- 3' Ubxd4 mmu-miR-199bstar beg:1078 end:1100 pic:3' CTTGTCCATCAGA-TTTGTGACCC 5'& ||| ||. .|||||||| &5' ---CAGCT-GTTAAGAACACTGG- 3' Ubxd4 mmu-miR-20astar beg:410 end:426 pic:3' GAAATTCACG-AGCATTACGTCA 5'& || || ||||.||| &5' --------GCATC--AATGTAGT 3' Ubxd4 mmu-miR-20astar beg:608 end:627 pic:3' GAAATTCACGAGCATTACGTCA 5'& | || | ||||.||| &5' ------GGACTGGGAATGTAGT 3' Ubxd4 mmu-miR-212 beg:1073 end:1090 pic:3' ACCGGCACTGACCTCTGACAAT 5'& ||.|| .|||||| &5' ------TGGCTCA--GCTGTTA 3' Ubxd4 mmu-miR-2134 beg:1176 end:1198 pic:3' CGTGGGGCAA--AGGGTTCTG 5'& .|| || |.|||.||| &5' -TACAAAGTGAGTTCCAGGAC 3' Ubxd4 mmu-miR-2135 beg:752 end:776 pic:3' CAAAGCCGGGGT-TCTGGAGA 5'& || .||| ||.|||.| &5' GTAGTGGCAAAGCAGGCCTTT 3' Ubxd4 mmu-miR-2145 beg:1023 end:1038 pic:3' TTGGTCCGGGCTGGGACGA 5'& || ||||||. &5' ------GCAAAACCCTGT- 3' Ubxd4 mmu-miR-2145 beg:866 end:883 pic:3' TTGGTC-CGGGCTGGGACGA 5'& ||| | ||||||. &5' ---CAGAGAA--ACCCTGT- 3' Ubxd4 mmu-miR-2146 beg:1497 end:1510 pic:3' GTGTACCTTGGGAAGAGGTG 5'& |..||||||| &5' ---------CTTTTCTCCA- 3' Ubxd4 mmu-miR-2146 beg:864 end:886 pic:3' GTGTACC-TTGGGAAGAGGTG 5'& |||| | |||||| ||.| &5' CACAGAGAAACCCTG-TCTA- 3' Ubxd4 mmu-miR-2146 beg:1206 end:1228 pic:3' GTGTACC-TTGGGA-AGAGGTG 5'& |||| | |||||| |||| &5' CACAGAGAAACCCTCTCTC--- 3' Ubxd4 mmu-miR-214star beg:1134 end:1160 pic:3' CGTGT-CGTTCACA-TCTGTCCGT 5'& |||| | .|| ||.||||. &5' GCACTCGGGAGGCAGAGGCAGGT- 3' Ubxd4 mmu-miR-218 beg:998 end:1018 pic:3' TGTAC-CAATCTAGTTCGTGTT 5'& | ||| |.|| ||||.|| &5' ----GAGTTTGGTC-AGCATAA 3' Ubxd4 mmu-miR-221 beg:409 end:427 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& |||| ||||||||.| &5' -------AGCAT-CAATGTAGTT 3' Ubxd4 mmu-miR-221 beg:526 end:549 pic:3' CTTTGGGTCGTCTGT---TACATCGA 5'& |.|.| .||||||| &5' ----CTCGGAATAAAATTGTGTAGCT 3' Ubxd4 mmu-miR-23a beg:63 end:79 pic:3' CCTTTAGGGACCGTTACACTA 5'& |||.|| ||||||| &5' -GAAGTC------AATGTGA- 3' Ubxd4 mmu-miR-23b beg:254 end:272 pic:3' CCATTAGGGACCGTTACACTA 5'& |||||. .||||||.| &5' --TAATCT----TAATGTGGT 3' Ubxd4 mmu-miR-24 beg:803 end:824 pic:3' GACAAGGACGACTT--GACTCGGT 5'& | | || |||||.. &5' -----CAGGAGGATCTCTGAGTT- 3' Ubxd4 mmu-miR-2861 beg:755 end:775 pic:3' GGCGGGCGGCG----GTCCGGGG 5'& |. || ||||||.. &5' ------GTGGCAAAGCAGGCCTT 3' Ubxd4 mmu-miR-2861 beg:1093 end:1111 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.| |.| |||||||| &5' CTGGCTG-CGCCAGGC--- 3' Ubxd4 mmu-miR-28star beg:119 end:141 pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& |.|||. | |||||| |||| &5' TTCAGTCG-TCACAAGCTAG-- 3' Ubxd4 mmu-miR-291a-3p beg:45 end:65 pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& ||..||.|||||.|| || &5' -CATGCAGAGTGGGAG-AC--- 3' Ubxd4 mmu-miR-291b-3p beg:1417 end:1440 pic:3' TGTTTGTTTTACC-TACGTGAAA 5'& .||.||||||| |||||. &5' GCAGACAAAATATCATGCAT--- 3' Ubxd4 mmu-miR-297a beg:638 end:659 pic:3' TGTACGTGTAC-GTGTGTATGTA 5'& .|. || ||.|||||||| &5' -----TATTTGCCATACATACAT 3' Ubxd4 mmu-miR-297c beg:638 end:659 pic:3' TGTACATGTAC-GTGTGTATGTA 5'& ||. || ||.|||||||| &5' -----TATTTGCCATACATACAT 3' Ubxd4 mmu-miR-299 beg:586 end:602 pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& |||| |.|.||||. &5' --------TACC-TTCTACATG 3' Ubxd4 mmu-miR-29bstar beg:1326 end:1352 pic:3' ATTTGG--TGGTATACTTTGGT--CG 5'& .| .|||||||||||. || &5' ---GCACAGCCATATGAAACTTCTGC 3' Ubxd4 mmu-miR-3099 beg:1358 end:1382 pic:3' AGGGGTTGGA-GAG-AGATCGGAT 5'& .|||||. ||| |||.|||| &5' --TCCAACTCCCTCTTCTGGCCT- 3' Ubxd4 mmu-miR-30astar beg:16 end:27 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||||||.| &5' -------------GACTGAGA- 3' Ubxd4 mmu-miR-30c-1star beg:1210 end:1229 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& ||| |||||||||.|. &5' -GAGA----AACCCTCTCTCG- 3' Ubxd4 mmu-miR-30estar beg:16 end:27 pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||||||.| &5' -------------GACTGAGA- 3' Ubxd4 mmu-miR-324-3p beg:1308 end:1330 pic:3' TCGTCGTGGACC--CCGTCACC 5'& |||||. ||||||| &5' --CAGCATACACATGGCAGTG- 3' Ubxd4 mmu-miR-328 beg:1190 end:1209 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| ||| |||||.| &5' -----AGGACAGCCAGGGCTA- 3' Ubxd4 mmu-miR-33 beg:414 end:438 pic:3' ACGTTACGT---TGATGT-TACGTG 5'& |||||.| |.|.| .||| &5' --CAATGTAGTTATTGCCCGTGC-- 3' Ubxd4 mmu-miR-33 beg:704 end:727 pic:3' ACGTTACGTTGATGTTACGTG 5'& ||.||||.|| .|| ||| &5' TGTAATGTAAAAGCACA-CAC 3' Ubxd4 mmu-miR-33 beg:1310 end:1333 pic:3' ACGTTAC-GTTGATGTTACGTG 5'& ||| || .||.||||| &5' -GCATACACATG-GCAGTGCAC 3' Ubxd4 mmu-miR-335-5p beg:1032 end:1045 pic:3' TGTAAAAAGCAATAAC-GAGAACT 5'& || ||||||| &5' --------------TGTCTCTTGA 3' Ubxd4 mmu-miR-33 beg:1511 end:1531 pic:3' ACGTTACGTTGA-TGTTACGTG 5'& ||.||||. || |||||| &5' TGTAATGT--CTAACAATG--- 3' Ubxd4 mmu-miR-345-3p beg:611 end:631 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& | |. . |||||||| &5' ----CTGGGAATGTAGTTCAG- 3' Ubxd4 mmu-miR-3470a beg:1167 end:1188 pic:3' GGTCGGACCAGATGTTTCACT 5'& .||| ||||||||||||| &5' --GGCCA-GTCTACAAAGTGA 3' Ubxd4 mmu-miR-3470b beg:39 end:59 pic:3' GGTCGGACCAGATGTCTCACT 5'& ||. |.|||||||. &5' --AGTAGACA-TGCAGAGTGG 3' Ubxd4 mmu-miR-3470b beg:132 end:149 pic:3' GGTCGGACCAGATGTCTCACT 5'& |||. || ||||||| &5' --AGCTAGG-----AGAGTGA 3' Ubxd4 mmu-miR-3474 beg:844 end:864 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& |.| ||.|||||| &5' ----CTAACTAA-CTTCCAGGG 3' Ubxd4 mmu-miR-384-3p beg:126 end:144 pic:3' TAACACTTGTTAAAGATCCTTA 5'& || |||| ||||||. &5' ---GTC-ACAAG--CTAGGAG- 3' Ubxd4 mmu-miR-412 beg:1150 end:1171 pic:3' GCCGATCACCTGGTCCACTT 5'& ||| .|||||.. ||||. &5' -GGCAGGTGGATTT-GTGAG 3' Ubxd4 mmu-miR-431 beg:1181 end:1198 pic:3' ACGTACTGCCGGACGTTCTGT 5'& .||| | | ||.|||| &5' ---GTGA-GTTC--CAGGACA 3' Ubxd4 mmu-miR-434-3p beg:805 end:826 pic:3' TCCTCAGCTC-ACTACCAAGTTT 5'& ||||| ||| |||||| &5' AGGAGGATCTCTGA--GTTCAA- 3' Ubxd4 mmu-miR-450a-3p beg:313 end:332 pic:3' TACTTACGTTTC--GTAGGGGTTA 5'& |||| .|||.|||| &5' -------CAAATATTATCTCCAA- 3' Ubxd4 mmu-miR-455 beg:597 end:617 pic:3' CACATATACGGGCACCTGACG 5'& |||| || .. ||||||| &5' -TGTA-AT-TTTATGGACTG- 3' Ubxd4 mmu-miR-455star beg:615 end:638 pic:3' GC-TACATCAGGTTTCCGTGTAT 5'& | |||||||.||. ||.| . &5' -GAATGTAGTTCAGTGGTAGG-- 3' Ubxd4 mmu-miR-455star beg:262 end:285 pic:3' GCTACATCAGGTTTC--CGTGTAT 5'& ||||.|||.||| ||| | &5' --ATGTGGTCTAAATTAGCAGA-- 3' Ubxd4 mmu-miR-466a-5p beg:638 end:660 pic:3' ATACATGTACA-TGTGTGTGTAT 5'& ||. || |.|||.||||. &5' ----TATTTGCCATACATACATG 3' Ubxd4 mmu-miR-466b-5p beg:638 end:659 pic:3' GTACATGTACA-TGTGTGTGTAG 5'& ||. || |.|||.|||| &5' ----TATTTGCCATACATACAT- 3' Ubxd4 mmu-miR-466b-5p beg:1310 end:1323 pic:3' GTACATGTACATGTGTGTGTAG 5'& .||.|||||| &5' -----------GCATACACAT- 3' Ubxd4 mmu-miR-466c-5p beg:638 end:659 pic:3' ATACATGTAC-GTGTGTGTGTAG 5'& ||. || ||.|||.|||| &5' ----TATTTGCCATACATACAT- 3' Ubxd4 mmu-miR-466d-5p beg:705 end:728 pic:3' GTACATGTACATG--CGTGTGTGT 5'& |||| ||||| ||||||||| &5' --TGTA-ATGTAAAAGCACACACA 3' Ubxd4 mmu-miR-466e-5p beg:638 end:659 pic:3' ATACATGTACA-TGTGTGTGTAG 5'& ||. || |.|||.|||| &5' ----TATTTGCCATACATACAT- 3' Ubxd4 mmu-miR-466f beg:642 end:660 pic:3' TGTACGTGTACGTGTGTGTGCA 5'& ||| ||| |||.|||.| &5' ---TGC-CAT--ACATACATG- 3' Ubxd4 mmu-miR-466h beg:1409 end:1442 pic:3' ATGTGTGTTCGT----------GTACGTGTGT 5'& |||.||| ||| ||||||.|. &5' -ACATACACGCAGACAAAATATCATGCATAT- 3' Ubxd4 mmu-miR-466j beg:1412 end:1442 pic:3' AATGTGTGTACGT------GTACGTGTGT 5'& |||||.|| || ||||||.|. &5' -TACACGCAGACAAAATATCATGCATAT- 3' Ubxd4 mmu-miR-466k beg:1402 end:1420 pic:3' AGTGTACATGTACATGTGTGTGT 5'& |||.| |||.|||| &5' -------TACGTAGACATACAC- 3' Ubxd4 mmu-miR-466l beg:332 end:348 pic:3' TTATACACACGTACATAAATAT 5'& ||| |||||||| &5' ---------GCAGATATTTATA 3' Ubxd4 mmu-miR-467c beg:1402 end:1423 pic:3' GTGTATATGTACGTGCGTGAAT 5'& .||.|| |||| |||||| &5' TACGTAGACATACACGCA---- 3' Ubxd4 mmu-miR-470 beg:1177 end:1197 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || |||| ||||.|| &5' ---CAA-AGTGAGT-TCCAGGA- 3' Ubxd4 mmu-miR-470 beg:810 end:830 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |.| || |||.||||.| &5' ----ATCTCTG--AGTTCAAGGA 3' Ubxd4 mmu-miR-488 beg:440 end:459 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& || |. |||.|||||. &5' --CCTCGG---AGCTTTTCAG 3' Ubxd4 mmu-miR-490 beg:1284 end:1304 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& .|| || || |||||||| &5' -GGC-TGTAGA--TCCAGGTT- 3' Ubxd4 mmu-miR-493 beg:1113 end:1131 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||||.||| .||||.| &5' --TGGCGCAC------GCCTTTA 3' Ubxd4 mmu-miR-496 beg:467 end:488 pic:3' CTCTAACCGGTACATTATGAGT 5'& || |||| .||||||| &5' --GA-TGGCAAAA-GATACTCA 3' Ubxd4 mmu-miR-500 beg:934 end:957 pic:3' ACTTGGGAACGGG--TCCACGTAA 5'& |||| | ||||| |||||.|| &5' TGAAA-C-TGCCCACAGGTGTAT- 3' Ubxd4 mmu-miR-504 beg:843 end:866 pic:3' CTATCTCACGTCT-------GGTCCCAGA 5'& || |||||||. &5' --------GCTAACTAACTTCCAGGGTT- 3' Ubxd4 mmu-miR-511 beg:793 end:813 pic:3' ACTCACGTCT-CGTTTTCCGTA 5'& ||| ||||| |||..||| &5' -GAG-GCAGAGGCAGGAGG--- 3' Ubxd4 mmu-miR-540-3p beg:1188 end:1208 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||| | .|| |.|. &5' CCAGGA-CAGCCAG-GGCT- 3' Ubxd4 mmu-miR-540-3p beg:1294 end:1315 pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||||| || |..|| .| &5' CCAGGTTCAATTTCCAGC-- 3' Ubxd4 mmu-miR-540-3p beg:1359 end:1382 pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||| |.||||.||| &5' CCAACTCCCTCTTCTGGCCT 3' Ubxd4 mmu-miR-544 beg:35 end:58 pic:3' CTCGAACG---ATTTTTACGTCTTA 5'& |||| ||.| |||||||.| &5' ----TTGCAAGTAGACATGCAGAGT 3' Ubxd4 mmu-miR-582-3p beg:178 end:189 pic:3' AACCCAAGTCAACAAGTTGTCC 5'& |||||||| &5' --------------TCAACAGG 3' Ubxd4 mmu-miR-654-3p beg:330 end:343 pic:3' TTCCACTACCAGTCGTCTGTAT 5'& |||||||.|| &5' -----------CAGCAGATAT- 3' Ubxd4 mmu-miR-654-3p beg:28 end:52 pic:3' TTCCACTACCAG---TCGTCTGTAT 5'& |||||||. ||.||||||. &5' ----TGATGGTTGCAAGTAGACATG 3' Ubxd4 mmu-miR-669b beg:1409 end:1431 pic:3' TGTACGTGTACGTGTGTTTTGA 5'& |||| ||| ||| ||||||. &5' ACATACAC--GCAGACAAAAT- 3' Ubxd4 mmu-miR-669e beg:1340 end:1361 pic:3' TACTTGT---ACGTGTGTGTTCTGT 5'& ||| ||| .||||||.| &5' --GAAACTTCTGC---TACAAGATA 3' Ubxd4 mmu-miR-669g beg:410 end:424 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& .||| |||||.| &5' -----------GCAT-CAATGTA 3' Ubxd4 mmu-miR-669g beg:1308 end:1332 pic:3' TAGTACAGT-TGTGTA-TGTTACGT 5'& || || |||||| .||.|||| &5' --CAG--CATACACATGGCAGTGCA 3' Ubxd4 mmu-miR-669h-5p beg:1421 end:1440 pic:3' CGTGAGTTGATATGTG----GGTACGTA 5'& ||| .||||||| &5' ------------ACAAAATATCATGCAT 3' Ubxd4 mmu-miR-669h-5p beg:37 end:54 pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& ||| || |||||| &5' -----CAAGTAGA----CATGCA- 3' Ubxd4 mmu-miR-669o beg:1403 end:1426 pic:3' TGTATTTGTACGTGTGTGTTGAT 5'& ||.||.|||| |||.|| .|| &5' ACGTAGACATACACGCA-GAC-- 3' Ubxd4 mmu-miR-669o beg:708 end:729 pic:3' TGTATTTGTACGTGTGTGTTGAT 5'& |..|||| |||||||||| &5' ATGTAAAA--GCACACACAA--- 3' Ubxd4 mmu-miR-671-3p beg:1154 end:1174 pic:3' CCACCTCGGGACTCTTGGCCT 5'& |||||| .. |||| .|| &5' GGTGGATTTGTGAG-GCC--- 3' Ubxd4 mmu-miR-672 beg:1315 end:1337 pic:3' AGTGTG-TGTCATGTGGTTGGAGT 5'& ||||. .||||.|| ||.|| &5' -CACATGGCAGTGCA-CAGCC--- 3' Ubxd4 mmu-miR-672 beg:1412 end:1435 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& .||||.||| ||| ||. ||| &5' -TACACGCAG-ACAA-AATATCA 3' Ubxd4 mmu-miR-673-3p beg:1271 end:1289 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| ..|| ||||.|| &5' ----CACT-GGCT--GCCCTGG- 3' Ubxd4 mmu-miR-681 beg:1095 end:1117 pic:3' TCGACGGACGGT-CGCT-CCGAC 5'& .||||| |||| |||. ||. &5' GGCTGC--GCCAGGCGGTGGT-- 3' Ubxd4 mmu-miR-682 beg:1374 end:1396 pic:3' GTCTGAAGTGACAC---TGACGTC 5'& |.| ||||| |||||| &5' --GGCCT--CTGTGGTCACTGCA- 3' Ubxd4 mmu-miR-683 beg:329 end:339 pic:3' CTCCTGTGTCGAATGTCGTCC 5'& ||||||| &5' -------------ACAGCAG- 3' Ubxd4 mmu-miR-686 beg:1135 end:1152 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& |||. ||||.|||. &5' ----CACTC---GGGAGGCAG- 3' Ubxd4 mmu-miR-686 beg:786 end:803 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& |||. |||.|||. &5' ----CACTTT---GGAGGCAG- 3' Ubxd4 mmu-miR-704 beg:1140 end:1161 pic:3' GATCCT-CGTCT-CGTGTACAGA 5'& .||| ||||| ||| .|| &5' --GGGAGGCAGAGGCAGGTG--- 3' Ubxd4 mmu-miR-705 beg:1044 end:1064 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |. || | |.||||||| &5' -GTA-ACAAC-CTTCCCACC 3' Ubxd4 mmu-miR-713 beg:157 end:175 pic:3' CGACACACGGA---AGTCACGT 5'& ||| |||||||| &5' -------GCCAGGGTCAGTGCA 3' Ubxd4 mmu-miR-758 beg:115 end:136 pic:3' ATCACCTGGTC--CAGTGTTT 5'& .| || ||| |||||||. &5' -GG-GGTTCAGTCGTCACAAG 3' Ubxd4 mmu-miR-758 beg:1163 end:1184 pic:3' ATCAC-CTGGTCCAGTGTTT 5'& ||| |.|||| .||||| &5' --GTGAGGCCAGTCTACAAA 3' Ubxd4 mmu-miR-767 beg:1473 end:1492 pic:3' ACGAGTCTGTTGGTACCACGT 5'& .||| || .|||||. &5' ----TAGAGAAAGGTGGTGT- 3' Ubxd4 mmu-miR-767 beg:1185 end:1207 pic:3' ACGAG--TCTGTTGGTACCACGT 5'& |.|| .||||.||| || || &5' -GTTCCAGGACAGCCA-GG-GC- 3' Ubxd4 mmu-miR-7a beg:1261 end:1286 pic:3' TGTTGTTTTA--GTGATCAGAA-GGT 5'& ||||||| ||||.| || || &5' --AACAAAAAAACACTGG-CTGCCC- 3' Ubxd4 mmu-miR-7a beg:574 end:589 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||| |||.|||.| &5' ----------CAC-AGTTTTCTA 3' Ubxd4 mmu-miR-7b beg:574 end:589 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||| |||.|||.| &5' ----------CAC-AGTTTTCTA 3' Ubxd4 mmu-miR-871 beg:801 end:823 pic:3' GTACTGACCGTGATTAGACTTAT 5'& |.| || |||||.| &5' ---GGCAGGAGGATCTCTGAGT- 3' Ubxd4 mmu-miR-872star beg:608 end:630 pic:3' TCCTCCGATGACGT---TATCAAGT 5'& || |||| . .||||||| &5' ----GG--ACTGGGAATGTAGTTCA 3' Ubxd4 mmu-miR-875-3p beg:440 end:459 pic:3' GTATCGGAGTCAT-AAAAGTCC 5'& ||||.| ||||||| &5' -----CCTCGGAGCTTTTCAG- 3' Ubxd4 mmu-miR-875-5p beg:935 end:956 pic:3' GTGGACTATTTTGAC-----TCCATAT 5'& |.|||||| ||||.|| &5' -------TGAAACTGCCCACAGGTGTA 3' Ubxd4 mmu-miR-876-5p beg:857 end:880 pic:3' ATCACTAA-GTGTCTCTTTAGGT 5'& || |.|| |||||||||| || &5' -AG-GGTTACACAGAGAAACCC- 3' Ubxd4 mmu-miR-879 beg:757 end:776 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||| ||| |.||||.| &5' GGCAA--AGC---AGGCCTTT 3' Ubxd4 mmu-miR-879star beg:994 end:1019 pic:3' GGCTTTCGAACT--TCGGTATTCG 5'& || .||.|||. || |||||| &5' CCAGGAGTTTGGTCAG-CATAAG- 3' Ubxd4 mmu-miR-881 beg:562 end:584 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||| || |||||||| &5' -CTAATCTATAT--ACACAGTT 3' Ubxd4 mmu-miR-881 beg:186 end:207 pic:3' AGATAAGTCTTTTC-TGTGTCAA 5'& |||||||||||| |.|| &5' -CTATTCAGAAAAAAATAC---- 3' Ubxd4 mmu-miR-883b-5p beg:349 end:368 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||.|| |.| ||||||| &5' ----TGTTAGCTA-TCTCAGT- 3' Ubxd4 mmu-miR-92astar beg:1044 end:1064 pic:3' CATTACGG---TGGTTAGGGGTGGA 5'& |. ||| |.|||||| &5' -----GTAACAACC--TTCCCACC- 3' Ubxd4 mmu-miR-98 beg:354 end:366 pic:3' TTGTTATGTTGAATGATGGAGT 5'& .|||.|||| &5' -------------GCTATCTCA 3' Ubxd4 mmu-miR-470 beg:498 end:516 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || |||| ||||||| &5' ---CAACAGTA----TCCAAGA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ubxn2a RAID00105311 mmu-miR-295-3p miRNA MIMAT0000373 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID00111552 mmu-miR-490-3p miRNA MIMAT0003780 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00181670 mmu-miR-382-5p miRNA MIMAT0000747 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00240230 mmu-miR-713 miRNA MIMAT0003504 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00242916 mmu-miR-130a-3p miRNA MIMAT0000141 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00262443 mmu-miR-3961 miRNA MIMAT0019338 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00335011 mmu-miR-6540-5p miRNA MIMAT0025585 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00357136 mmu-miR-155-5p miRNA MIMAT0000165 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00412065 mmu-miR-27b-3p miRNA MIMAT0000126 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00432662 mmu-miR-193a-3p miRNA MIMAT0000223 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID00471222 mmu-miR-181d-5p miRNA MIMAT0004324 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00477026 mmu-miR-721 miRNA MIMAT0003515 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00509881 mmu-miR-3078-3p miRNA MIMAT0014865 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00531910 mmu-miR-504-5p miRNA MIMAT0004889 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00595293 mmu-miR-7646-5p miRNA MIMAT0029794 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00629996 mmu-miR-291a-3p miRNA MIMAT0000368 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID00639288 mmu-miR-494-3p miRNA MIMAT0003182 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00681845 mmu-miR-466d-5p miRNA MIMAT0004930 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00704532 mmu-miR-7226-3p miRNA MIMAT0028421 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00708464 mmu-miR-543-3p miRNA MIMAT0003168 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00723856 mmu-miR-93-5p miRNA MIMAT0000540 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6478 Ubxn2a RAID00808792 mmu-miR-3471 miRNA MIMAT0015642 Ubxn2a mRNA 217379 CLIP-seq 0.5483 Ubxn2a RAID00863642 mmu-miR-124-3p miRNA MIMAT0000134 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00868473 mmu-miR-431-5p miRNA MIMAT0001418 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00871819 mmu-miR-143-3p miRNA MIMAT0000247 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00885144 mmu-miR-222-3p miRNA MIMAT0000670 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00919392 mmu-miR-3618-3p miRNA MIMAT0035717 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID00964766 mmu-miR-193b-3p miRNA MIMAT0004859 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID01039281 mmu-miR-20a-5p miRNA MIMAT0000529 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6478 Ubxn2a RAID01067976 mmu-miR-302b-3p miRNA MIMAT0003374 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID01089398 mmu-miR-294-3p miRNA MIMAT0000372 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID01125356 mmu-miR-1896 miRNA MIMAT0007873 Ubxn2a mRNA 217379 CLIP-seq 0.5483 Ubxn2a RAID01158262 mmu-miR-6383 miRNA MIMAT0025129 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01164515 mmu-miR-1194 miRNA MIMAT0005852 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01193524 mmu-miR-5101 miRNA MIMAT0020608 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01217083 mmu-miR-301b-3p miRNA MIMAT0004186 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01247953 mmu-miR-758-3p miRNA MIMAT0003889 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01270553 mmu-miR-34a-5p miRNA MIMAT0000542 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01356567 mmu-miR-125a-3p miRNA MIMAT0004528 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01406905 mmu-miR-694 miRNA MIMAT0003474 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01422450 mmu-miR-200c-3p miRNA MIMAT0000657 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01448079 mmu-miR-1192 miRNA MIMAT0005850 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01472668 mmu-miR-7035-5p miRNA MIMAT0027974 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01633038 mmu-miR-340-5p miRNA MIMAT0004651 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01765868 mmu-miR-29c-3p miRNA MIMAT0000536 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01802505 mmu-miR-496a-3p miRNA MIMAT0003738 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01811645 mmu-miR-190b-5p miRNA MIMAT0004852 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01825126 mmu-miR-23b-3p miRNA MIMAT0000125 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01836591 mmu-miR-1981-5p miRNA MIMAT0009458 Ubxn2a mRNA 217379 CLIP-seq 0.5483 Ubxn2a RAID01872768 mmu-miR-135b-5p miRNA MIMAT0000612 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01908232 mmu-miR-377-3p miRNA MIMAT0000741 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01923217 mmu-miR-5125 miRNA MIMAT0020635 Ubxn2a mRNA 217379 CLIP-seq 0.5483 Ubxn2a RAID01936838 mmu-miR-7094-3p miRNA MIMAT0028095 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01971362 mmu-miR-19b-1-5p miRNA MIMAT0017065 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID01994962 mmu-miR-323-3p miRNA MIMAT0000551 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02043075 mmu-miR-183-5p miRNA MIMAT0000212 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02062136 mmu-miR-3098-3p miRNA MIMAT0014918 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02069090 mmu-miR-539-5p miRNA MIMAT0003169 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02084056 mmu-miR-106b-5p miRNA MIMAT0000386 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6478 Ubxn2a RAID02144377 mmu-miR-23a-3p miRNA MIMAT0000532 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02146656 mmu-miR-1971 miRNA MIMAT0009446 Ubxn2a mRNA 217379 CLIP-seq 0.5483 Ubxn2a RAID02152843 mmu-miR-874-3p miRNA MIMAT0004853 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02185389 mmu-miR-449c-5p miRNA MIMAT0003460 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02202285 mmu-miR-6379 miRNA MIMAT0025125 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02244235 mmu-miR-137-3p miRNA MIMAT0000149 Ubxn2a mRNA 217379 Prediction 0.2381 Ubxn2a RAID02297073 mmu-miR-221-3p miRNA MIMAT0000669 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02354375 mmu-miR-425-5p miRNA MIMAT0004750 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02409490 mmu-miR-653-5p miRNA MIMAT0004943 Ubxn2a mRNA 217379 Prediction 0.2202 Ubxn2a RAID02442089 mmu-miR-433-3p miRNA MIMAT0001420 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02482235 mmu-miR-302a-3p miRNA MIMAT0000380 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID02484481 mmu-miR-20b-5p miRNA MIMAT0003187 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6478 Ubxn2a RAID02518281 mmu-miR-302d-3p miRNA MIMAT0003377 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID02537944 mmu-miR-449a-3p miRNA MIMAT0017180 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02606035 mmu-miR-7020-5p miRNA MIMAT0027944 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02958010 mmu-miR-190a-5p miRNA MIMAT0000220 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02973323 mmu-miR-466l-5p miRNA MIMAT0017322 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID02992917 mmu-miR-149-5p miRNA MIMAT0000159 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03028281 mmu-miR-683 miRNA MIMAT0003461 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03073216 mmu-miR-106a-5p miRNA MIMAT0000385 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6478 Ubxn2a RAID03113414 mmu-miR-186-5p miRNA MIMAT0000215 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03121156 mmu-miR-129-5p miRNA MIMAT0000209 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03149028 mmu-miR-489-3p miRNA MIMAT0003112 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03150240 mmu-miR-29a-3p miRNA MIMAT0000535 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03203469 mmu-miR-449a-5p miRNA MIMAT0001542 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03259520 mmu-miR-383-5p miRNA MIMAT0000748 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03300410 mmu-miR-130b-3p miRNA MIMAT0000387 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03382912 mmu-miR-3110-5p miRNA MIMAT0014951 Ubxn2a mRNA 217379 CLIP-seq//Prediction 0.6308 Ubxn2a RAID03390895 mmu-miR-218-5p miRNA MIMAT0000663 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03391473 mmu-miR-34b-5p miRNA MIMAT0000382 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03427081 mmu-miR-29b-3p miRNA MIMAT0000127 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03565674 mmu-miR-449b miRNA MIMAT0005447 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03566219 mmu-miR-34c-5p miRNA MIMAT0000381 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03641193 mmu-miR-590-3p miRNA MIMAT0004896 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03645081 mmu-miR-224-5p miRNA MIMAT0000671 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03679560 mmu-miR-17-5p miRNA MIMAT0000649 Ubxn2a mRNA 217379 NGS (Next Generation Sequencing)//CLIP-seq//Prediction 0.7353 Ubxn2a RAID03700590 mmu-miR-881-3p miRNA MIMAT0004846 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03729612 mmu-miR-301a-3p miRNA MIMAT0000379 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03761024 mmu-miR-503-3p miRNA MIMAT0004790 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03763023 mmu-miR-135a-5p miRNA MIMAT0000147 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03780899 mmu-miR-199a-5p miRNA MIMAT0000229 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03820526 mmu-miR-488-3p miRNA MIMAT0003450 Ubxn2a mRNA 217379 Prediction 0.2202 Ubxn2a RAID03851293 mmu-miR-384-3p miRNA MIMAT0001076 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID03916309 mmu-miR-350-3p miRNA MIMAT0000605 Ubxn2a mRNA 217379 CLIP-seq 0.5483 Ubxn2a RAID03998044 mmu-miR-7033-3p miRNA MIMAT0027971 Ubxn2a mRNA 217379 Prediction 0.1828 Ubxn2a RAID04000033 mmu-miR-293-5p miRNA MIMAT0004573 Ubxn2a mRNA 217379 Prediction 0.1828