SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4229226 | snp | C/T | 0.21875 | 0.248039 | synonymous-codon, intron-variant, downstream-variant-500B | Itsn2, Fam228a | Mm_Celera | 12:4713128 | CCGACTACTACTGCA[C/T]GAAGTCCCCACTGGA | 20403 |
rs4229227 | snp | A/G | 0.21875 | 0.248039 | utr-variant-3-prime, intron-variant, downstream-variant-500B | Itsn2, Fam228a | Mm_Celera | 12:4713206 | CCTTTGAGGGCCTGG[A/G]GAAGCCAGAACCAGG | 20403 |
rs4229228 | snp | C/T | 0.21875 | 0.248039 | utr-variant-3-prime, intron-variant, downstream-variant-500B | Itsn2, Fam228a | Mm_Celera | 12:4713229 | GAACCAGGGGAGCTG[C/T]CCACAAGGCTGGGTC | 20403 |
rs4229229 | snp | C/G | 0.21875 | 0.248039 | utr-variant-3-prime, intron-variant, downstream-variant-500B | Itsn2, Fam228a | Mm_Celera | 12:4713251 | GGCTGGGTCTAAAGA[C/G]AGATTTTGCTCTCCC | 20403 |
rs4229230 | snp | C/T | 0.21875 | 0.248039 | utr-variant-3-prime, downstream-variant-500B, intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4713381 | GATCTTTTAAACAAA[C/T]GCCACAGCACAGTGC | 20403 |
rs4229231 | snp | A/G | 0.265928 | 0.249492 | utr-variant-3-prime, downstream-variant-500B, intron-variant | Itsn2, Fam228a | GRCm38.p3 | 12:4713437 | CTGTGTTAGATGCCA[A/G]GGTTTCCATTTTCAG | 20403 |
rs4229232 | snp | A/G | 0.30839 | 0.243086 | utr-variant-3-prime, downstream-variant-500B, intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4713511 | ACGTTACCACTTGGC[A/G]AATCTGTCCACTGTG | 20403 |
rs4229233 | snp | A/G | 0.21875 | 0.248039 | utr-variant-3-prime, downstream-variant-500B, intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4713547 | GGTGATGTTGGAACC[A/G]TTCCACACTATGTGA | 20403 |
rs6197893 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4648138 | AAGCTACTGCAGCTC[C/T]CAGTCTTAAAGAATA | 20403 |
rs6197935 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4648176 | GGCTAATGTTACACA[A/G]ATTAAGATCATNCAT | 20403 |
rs6197964 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4648188 | ACANATTAAGATCAT[A/G]CATTAATTTGGATTC | 20403 |
rs6245947 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4663274 | ctagacatgggtatg[C/T]atgcttgtagattca | 20403 |
rs6246581 | snp | A/G | 0.345679 | 0.230967 | intron-variant | Itsn2 | GRCm38.p3 | 12:4663404 | AGCCTGGAGACATTA[A/G]CATTAAACAAGGCTG | 20403 |
rs6247024 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4663452 | GCTCTCTTCTATGCT[A/G]CTCACAGTTCAGTCA | 20403 |
rs6247078 | snp | G/T | 0.48 | 0.0979796 | intron-variant | Itsn2 | GRCm38.p3 | 12:4663471 | ACAGTTCAGTCACGG[G/T]TCCTGNGACTCCTCT | 20403 |
rs6247098 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4663477 | CAGTCACGGNTCCTG[A/G]GACTCCTCTGTATCC | 20403 |
rs6247491 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4656945 | ttgtatctctagttg[C/T]atatgtagcagagga | 20403 |
rs6247555 | snp | A/C | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4663542 | AACTTTTAAAACTAG[A/C]ATCTTGGAGTAACAT | 20403 |
rs6247556 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4656982 | agtcagccatcaatg[A/G]gaggagacacccttg | 20403 |
rs6247973 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4657033 | GGCAAGATAACCAAG[C/T]ATAAACTTGGAGGTG | 20403 |
rs6248011 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Itsn2 | Mm_Celera | 12:4657050 | TAAACTTGGAGGTGC[C/T]GTCACTGTTTAAGGC | 20403 |
rs6280460 | snp | A/G | 0.484429 | 0.0868505 | intron-variant | Itsn2 | GRCm38.p3 | 12:4691862 | AATAGTGTTTAACCC[A/G]GTGTATTCAAAATAC | 20403 |
rs6280514 | snp | C/T | 0.415225 | 0.187619 | intron-variant | Itsn2 | Mm_Celera | 12:4691893 | CATACCAATATATAA[C/T]GAGTTTGGTTGCTCA | 20403 |
rs6281549 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4692050 | ggcCAAtattgatag[A/G]atggtttacagttca | 20403 |
rs6281624 | snp | G/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4692101 | acccagtgtgtggtt[G/T]gcatctgcagcacat | 20403 |
rs6282774 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4665484 | TCACATGAGGCCGTT[C/T]AGTAACAAANACTCA | 20403 |
rs6282790 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Itsn2 | GRCm38.p3 | 12:4665494 | CCGTTNAGTAACAAA[A/G]ACTCATTTGTCATCT | 20403 |
rs6284446 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | GRCm38.p3 | 12:4665794 | AAGCAGTGAGGCCTC[C/T]GCCAGCCACAGCTGC | 20403 |
rs6297773 | snp | C/T | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4665908 | CTGCAGCATAAGCAA[C/T]CATCTCTCCTTTCTT | 20403 |
rs29122616 | snp | A/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4619286 | CTCTGTTAGTACTAT[A/G]TCCAATTTTCTGAGG | 20403 |
rs29216353 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Itsn2 | Mm_Celera | 12:4600710 | CCCAGCCCCACTCTT[C/T]TTGACACATTCCTAG | 20403 |
rs29223400 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Itsn2 | Mm_Celera | 12:4600707 | CCCCCCAGCCCCACT[C/T]TTCTTGACACATTCC | 20403 |
rs45634673 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Itsn2 | Mm_Celera | 12:4683385 | GGCGAATCCAGGTTG[A/G]CCAAGTTACATTCAG | 20403 |
rs45635489 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Itsn2 | Mm_Celera | 12:4648481 | ACAACCCATAACCAC[C/T]GTCCTCTTTTGTTTC | 20403 |
rs45661688 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4705983 | TGACAGAACTCCACA[C/G]AGTGACTGCTTCCTG | 20403 |
rs45662344 | snp | G/T | 0.32 | 0.24 | intron-variant | Itsn2 | GRCm38.p3 | 12:4689923 | ACTCCCGAAGCCTGC[G/T]CGCTCATTCACCGCC | 20403 |
rs45668975 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Itsn2 | Mm_Celera | 12:4611812 | ACTTTCAGACATACA[A/T]CTTATTTTTCTTTTA | 20403 |
rs45703356 | snp | G/T | 0.277778 | 0.248452 | intron-variant | Itsn2 | Mm_Celera | 12:4594880 | CCACTAAACTTCCTT[G/T]AGTATCACAGTGTAT | 20403 |
rs45706248 | snp | C/T | 0.260355 | 0.249785 | intron-variant | Itsn2 | Mm_Celera | 12:4595550 | CGGACAATCAGGGAG[C/T]TACTACCAGATGGGA | 20403 |
rs45723939 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4706032 | TTGACCTGGGGCAGC[A/C]GCTACATTGAGAGAA | 20403 |
rs45726201 | snp | A/T | 0.21875 | 0.248039 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4712151 | CTATGGATTGGGCCA[A/T]TATCATTCACAGTTT | 20403 |
rs45759685 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Itsn2 | Mm_Celera | 12:4692292 | ATTTTGGCAGCTCTG[C/T]GTGCCTCTGATTGAC | 20403 |
rs45765240 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Itsn2 | Mm_Celera | 12:4642002 | AGGCGATTGAGAACA[C/T]TAAAGGGGTGTGAGA | 20403 |
rs45784477 | snp | C/G/T | 0.336735 | 0.234472 | intron-variant | Itsn2 | Mm_Celera | 12:4652852 | GTCCAATCTAACATA[C/G/T]TTCTGTAGTGCATCT | 20403 |
rs45790153 | snp | C/T | 0.32 | 0.24 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4701156 | GACATTTGTGGAGAA[C/T]GGATGTGACTGCCAG | 20403 |
rs45793876 | snp | C/T | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4662923 | GATTGGCCTGGAGTC[C/T]GGAAGGATGAAGTAG | 20403 |
rs45801880 | snp | A/C | 0.244898 | 0.249948 | intron-variant | Itsn2 | Mm_Celera | 12:4642355 | TCACAGGCTCTGCTT[A/C]CATGTTCACCATGCA | 20403 |
rs45805572 | snp | C/T | 0.391111 | 0.206368 | intron-variant | Itsn2 | Mm_Celera | 12:4696366 | ATGAGGAGGGATTTC[C/T]CAGGGTAGTTCCCAG | 20403 |
rs45809024 | snp | A/G | | | intron-variant | Itsn2 | Mm_Celera | 12:4605607 | AATGTTTATTGTTGG[A/G]CTGGAGAGGTGCCTC | 20403 |
rs45812608 | snp | G/T | | | intron-variant | Itsn2 | Mm_Celera | 12:4660560 | AGCACCTACGTCAGG[G/T]GGCTCACACCTTCCT | 20403 |
rs45824883 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4699744 | CTTTTTCTGCAGGCT[C/T]CACTGTGCAGAGCCC | 20403 |
rs45839110 | snp | A/G | 0.152778 | 0.230321 | intron-variant | Itsn2 | Mm_Celera | 12:4598639 | CTTGTGTTCATGATG[A/G]TGAGCATTTCCCCAG | 20403 |
rs45843224 | snp | G/T | 0.426035 | 0.177515 | intron-variant | Itsn2 | Mm_Celera | 12:4597226 | ACTCTTGCATCTCTC[G/T]CAGATCGCCTCTTCA | 20403 |
rs45850233 | snp | C/G | 0.5 | 0 | intron-variant | Itsn2 | Mm_Celera | 12:4662655 | CTGCAGGAGTGTCAG[C/G]TGGCCAGATGGCTTT | 20403 |
rs45857558 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Itsn2, Fam228a | GRCm38.p3 | 12:4708290 | CAGCACAGGCTTGTC[C/T]CAGTGCCATAAGTCC | 20403 |
rs45859311 | snp | C/T | 0.152778 | 0.230321 | synonymous-codon, intron-variant | Itsn2 | Mm_Celera | 12:4640936 | TATGGATGACTGTGT[C/T]CTTCAGTGCCTTTTG | 20403 |
rs45860314 | snp | A/T | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4684246 | GTTAAGTCTGTGTTA[A/T]GCCGACAGGGGCAGG | 20403 |
rs45860448 | snp | C/T | | | intron-variant | Itsn2 | Mm_Celera | 12:4659206 | CGCAAAGAGACTTGT[C/T]TGCACAATGTTGAGG | 20403 |
rs45876321 | snp | A/G | 0.46875 | 0.121031 | intron-variant | Itsn2 | Mm_Celera | 12:4666001 | AGACAGTTGTTAACC[A/G]ATGGCTTCTATTCCA | 20403 |
rs45929327 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Itsn2 | GRCm38.p3 | 12:4694818 | TCCACACTTCATTGT[C/T]GTCTTCTAGATCAGC | 20403 |
rs45933119 | snp | C/T | | | intron-variant | Itsn2 | Mm_Celera | 12:4667160 | AGGAAGAAGTCAAAA[C/T]ATCACTATTTGCAGA | 20403 |
rs45949609 | snp | C/T | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4686871 | AGAGAACGAACGTAT[C/T]TTTACACACAGAGTA | 20403 |
rs45959567 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4710960 | AAGGCTTACATAGAA[G/T]TGAAATGTTGATGAG | 20403 |
rs45977285 | snp | A/G | 0.489796 | 0.070696 | intron-variant, downstream-variant-500B | Itsn2, Fam228a | GRCm38.p3 | 12:4712872 | TCCAGATAGGCAGCC[A/G]TCACTGGGCATCTGC | 20403 |
rs45999972 | snp | A/C | 0.244898 | 0.249948 | intron-variant | Itsn2 | Mm_Celera | 12:4692960 | GTAAAGGGCAGCGGT[A/C]AAAGGGTTGGAACCT | 20403 |
rs46017515 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Itsn2 | Mm_Celera | 12:4662072 | CGAGGAGAGTAAGCA[C/T]CCCGTGTTCTTATGT | 20403 |
rs46036357 | snp | A/C | 0.391111 | 0.206368 | intron-variant | Itsn2 | Mm_Celera | 12:4609130 | TTAACTTTTTCAGCA[A/C]ATATTTAAAAGTACT | 20403 |
rs46039548 | snp | A/C | 0.142012 | 0.225474 | intron-variant | Itsn2 | Mm_Celera | 12:4639971 | CTATTTTGTCATGAG[A/C]CGAGATATTTTCCCT | 20403 |
rs46060457 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Itsn2 | GRCm38.p3 | 12:4687195 | AGGAAGCTGCCTGTC[A/G]TTTTGCCCTTTCTTC | 20403 |
rs46076982 | snp | A/G | 0.152778 | 0.230321 | intron-variant | Itsn2 | Mm_Celera | 12:4625137 | TACTTTATTTTTCCC[A/G]CAACTGTCTTAATTT | 20403 |
rs46082144 | snp | A/T | 0.152778 | 0.230321 | intron-variant | Itsn2 | Mm_Celera | 12:4624745 | ATAGAATTCTACTTT[A/T]TGTCCTTCAAACATT | 20403 |
rs46090417 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4699849 | GCCCTTAAAAATCAG[C/T]CTTAATTGAGTTTTA | 20403 |
rs46100169 | snp | A/G | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4690516 | ACACACATGTTTGGA[A/G]AAAAGTAAAGGCAGA | 20403 |
rs46155659 | snp | C/G | 0.244898 | 0.249948 | intron-variant | Itsn2 | Mm_Celera | 12:4662432 | TCTTTTAGTTACTGA[C/G]TTTTTTGACCCATAT | 20403 |
rs46194275 | snp | A/G | 0.35503 | 0.226867 | intron-variant, utr-variant-3-prime | Itsn2 | Mm_Celera | 12:4678549 | TCAGCATCTGCAATC[A/G]GTCTGAAAATATGTT | 20403 |
rs46211108 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Itsn2 | Mm_Celera | 12:4595379 | AACTCTAAGAGTGCA[A/G]CGTATTTCATTTGCA | 20403 |
rs46231036 | snp | A/G | | | intron-variant | Itsn2 | Mm_Celera | 12:4627196 | TCTAGAATATCTGGG[A/G]TCATGTTTTTTAAAA | 20403 |
rs46244388 | snp | C/T | 0.345679 | 0.230967 | synonymous-codon, intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4712594 | GGATCTTTACCAGGA[C/T]GTTCTGTGTCTCACT | 20403 |
rs46293303 | snp | C/G | 0.277778 | 0.248452 | intron-variant | Itsn2 | Mm_Celera | 12:4603667 | GTATGTCTTACTGAA[C/G]ACTGATTTTTTAAAA | 20403 |
rs46312098 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4698697 | TGGAGCTGAGACATC[A/G]CCACAGTTCACAGAG | 20403 |
rs46330045 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Itsn2 | Mm_Celera | 12:4660184 | TAATGAAAGTACATG[A/G]AGAGGAAGCTAGATT | 20403 |
rs46337411 | snp | A/T | | | intron-variant | Itsn2 | Mm_Celera | 12:4627208 | GGGGTCATGTTTTTT[A/T]AAAATGTATTACAGT | 20403 |
rs46356451 | snp | G/T | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4685364 | CACTTTCTGATAGAA[G/T]CATACTACTTGATAT | 20403 |
rs46359117 | snp | C/T | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4612245 | CACCTGTCTGCCACA[C/T]TCAAGATTTATAACT | 20403 |
rs46396007 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Itsn2 | Mm_Celera | 12:4642208 | AGGCATGAAGACTAT[C/T]GGCTGCTCCTGAGGC | 20403 |
rs46407228 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4698010 | TCCACTGGGAACGCC[A/G]TCCTCCTCACGCCTG | 20403 |
rs46430221 | snp | G/T | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4608724 | GCAGAATGGTTGATA[G/T]CCATATTCCTAAGGC | 20403 |
rs46446437 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Itsn2 | Mm_Celera | 12:4611991 | TAATTCTGAGAGCCA[G/T]TTTTTGTTCTTTTTA | 20403 |
rs46448303 | snp | A/G | 0.391111 | 0.206368 | synonymous-codon, intron-variant | Itsn2, Fam228a | GRCm38.p3 | 12:4706343 | GATCACTCGCTACCC[A/G]CTGCTCATCCGAAGT | 20403 |
rs46464852 | snp | A/G | 0.32 | 0.24 | intron-variant | Itsn2 | Mm_Celera | 12:4694176 | AGCTGCCTGCCACCA[A/G]ACCACGCCCAAACTC | 20403 |
rs46493927 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Itsn2 | Mm_Celera | 12:4600421 | GTAGTGGGGAAAACA[A/G]CAGAAGGCCAGAGAC | 20403 |
rs46494931 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Itsn2 | Mm_Celera | 12:4687026 | GGAGTTAGGACTATT[A/T]GAGGAGAGGTGCTGA | 20403 |
rs46497000 | snp | A/G | | | intron-variant | Itsn2 | Mm_Celera | 12:4667153 | ATTGGAAAGGAAGAA[A/G]TCAAAATATCACTAT | 20403 |
rs46504049 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Itsn2 | Mm_Celera | 12:4686742 | GTGGGGAGTAAGACC[A/C]AAAGTTCTTAGCACG | 20403 |
rs46511402 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Itsn2, Fam228a | Mm_Celera | 12:4700120 | TCTGCACTGTGGCAT[A/G]CATGCCCCCGTCTTT | 20403 |
rs46549211 | snp | A/G | 0.391111 | 0.206368 | intron-variant | Itsn2 | Mm_Celera | 12:4610258 | AAGCTGCCCATCGTT[A/G]CACATTATCCTCTTC | 20403 |
rs46578829 | snp | A/G | 0.459184 | 0.136902 | intron-variant | Itsn2, Fam228a | GRCm38.p3 | 12:4699381 | GGTTTGCAGCTCATC[A/G]CTTGGCTAGTATGAC | 20403 |
rs46604446 | snp | C/T | 0.260355 | 0.249785 | intron-variant, upstream-variant-2KB | Itsn2, LOC105245369 | Mm_Celera | 12:4594480 | AATGTTCAACATATC[C/T]AAAGGCTCAAATCCC | 20403 |
rs46612905 | snp | A/C | 0.152778 | 0.230321 | intron-variant | Itsn2 | Mm_Celera | 12:4626323 | TGTTTAGGGTGAAGA[A/C]TCAAAGATGAGTAGC | 20403 |
rs46634878 | snp | C/T | 0.152778 | 0.230321 | intron-variant | Itsn2 | Mm_Celera | 12:4623874 | GGCACTCTTTATTGT[C/T]CCCTTGTTCCTTCTT | 20403 |