DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004525 mmu-miR-99b* 24057 Sh3yl1 gccUGGGUGU-CUGU--GCUCGAAc ||: || |||| ||||||| uuuACUGUCAGGACAUUCGAGCUUa 2 20 1239 1263 [mm9:12:31626834-31626858:+] 0.6944 153 7 -17.33 -1.1047 MIMAT0004530 mmu-miR-127* 24057 Sh3yl1 uaGUCUCGGGAGACUCGA-AGUc | ||||::||| |||| ||| ucCUGAGCUUUCU-AGCUAUCAu 2 21 1504 1525 [mm9:12:31643738-31643759:+] 0.6466 134 0 -19.33 -0.5454 MIMAT0004539 mmu-miR-183* 24057 Sh3yl1 aauaccgggaagccaUUAAGUg |||||| ccaaaauauuaagagAAUUCAc 2 8 753 774 [mm9:12:31607148-31607169:+] 0.7901 120 6 -8.28 -0.1785 MIMAT0004541 mmu-miR-188-3p 24057 Sh3yl1 acGUUUGGGACGUA-CACCCUc ||||:::|| | |||||| cuCAAAUUUUGAUUGGUGGGAa 2 20 1648 1669 [mm9:12:31644781-31644802:+] 0.7837 131 6 -20.65 -1.0520 MIMAT0004542 mmu-miR-191* 24057 Sh3yl1 cccUUGCUUUAGGUUCAC-GUCg ||| ||| ||||| ||| aucAAC-CAAUAGAAGUGACAGc 2 20 1545 1566 [mm9:12:31644678-31644699:+] 0.7837 121 0 -12.98 -1.2130 MIMAT0004544 mmu-miR-193* 24057 Sh3yl1 aguagaacgggcGUUUCUGGgu |||||||| ucauaguuauauCAAAGACCga 3 11 1626 1647 [mm9:12:31644759-31644780:+] 0.7837 130 0 -14.81 -0.1390 MIMAT0000234 mmu-miR-201 24057 Sh3yl1 uucuuGUUACGGAA-UGACUCau :||| |||| |||||| auucuUAAUUCCUUCACUGAGaa 3 18 1319 1341 [mm9:12:31626914-31626936:+] 0.6944 144 0 -14.96 -0.1535 MIMAT0000376 mmu-miR-298 24057 Sh3yl1 ccCUUCUUGUCGGGAGGAGACGg | | ||:| ::|:|||||| guGUAAAAUA--UUUUCUCUGCa 2 22 115 135 [mm9:12:31644974-31644994:+] 0.5568 138 6 -15.11 -0.6398 MIMAT0000376 mmu-miR-298 24057 Sh3yl1 ccCUUCUUGUCGGGAGGAGACGg | | ||:| ::|:|||||| guGUAAAAUA--UUUUCUCUGCa 2 22 1841 1861 [mm9:12:31644974-31644994:+] 0.5568 138 6 -15.11 -0.3022 MIMAT0004579 mmu-miR-302a* 24057 Sh3yl1 cguucAUGUUGG--UGCAAAUUCa ||:|| : |:| ||||| cugcaUAUAAAUAAAUGGUUAAGu 2 18 131 154 [mm9:12:31644990-31645013:+] 0.5568 120 0 -10.60 -0.1985 MIMAT0004583 mmu-miR-130b* 24057 Sh3yl1 ucaucACGUUGUCCCUU-UCUCa || ||:| |||| |||| ggauuUGAAAUA-GGAAUAGAGg 2 18 974 995 [mm9:12:31611719-31611739,31624439-31624439:+] 0.7411 123 0 -12.17 -0.8145 MIMAT0004625 mmu-miR-16* 24057 Sh3yl1 aguCGUC-GUGUCAGU-UAUGACc |||| |:: ||| |||||| uccGCAGCCGUCUUCACAUACUGc 2 20 1139 1162 [mm9:12:31625187-31625210:+] 0.7122 126 6 -17.01 -0.3387 MIMAT0004626 mmu-miR-18a* 24057 Sh3yl1 gucuuccucgUGA-AUCCCGUCa ||| ||||||| gaaauaugaaACUGAAGGGCAGc 2 13 1339 1361 [mm9:12:31626934-31626956:+] 0.6944 143 7 -15.39 -0.4151 MIMAT0004631 mmu-miR-29a* 24057 Sh3yl1 gacuuguGGUU-UUCUUUAGUCa |:|| |||||||| auaccuuCUAAUCUGAAAUCAGa 2 16 716 738 [mm9:12:31607111-31607133:+] 0.7901 146 7 -13.65 -1.0052 MIMAT0000571 mmu-miR-331-3p 24057 Sh3yl1 aagAUCCUAUCCGGGUCCCCg || : | |:||||||| acaUACUGCAAGUCCAGGGGc 2 19 1154 1174 [mm9:12:31625202-31625222:+] 0.7122 150 7 -23.34 -0.3243 MIMAT0000571 mmu-miR-331-3p 24057 Sh3yl1 aaGAUC-CUAUCCGGGUCCCCg ||:| | || ||||||| uuCUGGUCACAG--CCAGGGGa 2 20 873 892 [mm9:12:31609686-31609705:+] 0.7048 143 7 -21.30 -0.2411 MIMAT0000605 mmu-miR-350 24057 Sh3yl1 cuUUCACAUACCCGAAA-CACUu :|| |||| | ||| |||| uaGAG-GUAUCCGAUUUGGUGAu 2 21 990 1011 [mm9:12:31611735-31611739,31624439-31624455:+] 0.7411 122 0 -9.75 -0.9859 MIMAT0004660 mmu-miR-19a* 24057 Sh3yl1 caucAC-GUUGAUACGUUUUGAu || :||:|| ||||| | uacuUGAUAAUUACACAAAAAUa 2 19 18 40 [mm9:12:31644877-31644899:+] 0.5797 125 0 -5.48 -0.1353 MIMAT0004661 mmu-miR-28* 24057 Sh3yl1 agGUCGUCGAGUGUUAG-AUCAc ||| || || |||| |||| agCAGGAG-ACAGAAUCAUAGUu 2 21 1612 1633 [mm9:12:31644745-31644766:+] 0.7837 126 0 -16.65 -1.1615 MIMAT0004668 mmu-miR-138* 24057 Sh3yl1 gggaccacaacacUUCAUCGGc |||||||| aucaauuugaagaAAGUAGCCc 2 10 1364 1385 [mm9:12:31626959-31626980:+] 0.6276 145 7 -11.15 -0.1813 MIMAT0004669 mmu-miR-125b-3p 24057 Sh3yl1 ucgagGGUUCUCGGAUUGGGCa || || | ||||||| gcuggCCCAGUGAAUAACCCGa 2 18 695 716 [mm9:12:31597957-31597966,31607100-31607111:+] 0.6668 153 7 -22.40 -0.9348 MIMAT0004670 mmu-miR-7a* 24057 Sh3yl1 auaccgucugacacuAAACAAc |||||| ---aguucaugcuauUUUGUUa 2 8 1 19 [mm9:12:31644860-31644878:+] 0.5614 120 6 -4.63 -0.2948 MIMAT0000706 mmu-miR-362-5p 24057 Sh3yl1 uaaGUGUGGAUCCAAG-GUUCCUAa || :|| | | | ||||||| gggCA-GCCAAUGAACUCAAGGAUa 2 22 163 186 [mm9:12:31596696-31596719:+] 0.5012 146 7 -13.43 -0.3332 MIMAT0000742 mmu-miR-378* 24057 Sh3yl1 uguGUCCUGGACCU--CAGUCCUc |:| | :| | ||||||| aauCGGAAAUUUUACUGUCAGGAc 2 20 1229 1252 [mm9:12:31625277-31625284,31626832-31626847:+] 0.7033 142 7 -13.73 -0.9778 MIMAT0000744 mmu-miR-380-5p 24057 Sh3yl1 gcguacaagauaccAGUUGGUa ||||||| acuggcaauuugaaUCAACCAa 2 9 1532 1553 [mm9:12:31643766-31643769,31644669-31644686:+] 0.7151 140 7 -11.46 -1.2625 MIMAT0001094 mmu-miR-412 24057 Sh3yl1 gccgaucaccuGGUCCACuu ||||||| aauguuuuuauCCAGGUGua 3 10 100 119 [mm9:12:31644959-31644978:+] 0.5568 125 0 -14.26 -0.2334 MIMAT0001637 mmu-miR-452 24057 Sh3yl1 caGAGUCAAAGGAGACGUUUGu :||| | |:: |||||||| gaUUCACUGUUUACUGCAAACg 2 21 56 77 [mm9:12:31644915-31644936:+] 0.5683 164 7 -17.81 -0.5062 MIMAT0001637 mmu-miR-452 24057 Sh3yl1 caGAGUCAAAGGAGACGUUUGu :||| | |:: |||||||| gaUUCACUGUUUACUGCAAACg 2 21 1782 1803 [mm9:12:31644915-31644936:+] 0.5683 164 7 -17.81 -0.2175 MIMAT0002110 mmu-miR-469 24057 Sh3yl1 ccuguGGUUCUAGU-UAC-UUUC-UCCGu |::| |||| | | |||| |||| cuaauCUGAAAUCAGAAGCAAAGAAGGCu 2 22 723 751 [mm9:12:31607118-31607146:+] 0.7901 127 0 -12.97 -0.8510 MIMAT0003120 mmu-miR-483* 24057 Sh3yl1 uucugcccuccccUCCUCACu ||||||| ggucgcacgucuaAGGAGUGa 2 9 65 85 [mm9:12:31596598-31596618:+] 0.5012 140 7 -14.68 -0.1302 MIMAT0003120 mmu-miR-483* 24057 Sh3yl1 uucugcccUCCCCUCC-UCACu |||||||| |||| ucacagccAGGGGAGGCAGUGg 2 14 879 900 [mm9:12:31609692-31609713:+] 0.7048 129 0 -25.05 -0.1210 MIMAT0004786 mmu-miR-540-5p 24057 Sh3yl1 ugUCUCAGUCUCCCACUGGGAAc ||:|| : | |||||||| aaAGGGUGGAAACCUGACCCUUg 2 22 1048 1070 [mm9:12:31624492-31624514:+] 0.7434 157 7 -23.53 -0.2058 MIMAT0003171 mmu-miR-542-5p 24057 Sh3yl1 agcACUGU-ACUACUAGGGGCUc | :|| ||: ||||||| acuUAGCAGUGGGUUUCCCCGAu 2 20 289 311 [mm9:12:31596822-31596844:+] 0.5012 146 7 -17.98 -0.1627 MIMAT0003373 mmu-miR-302b* 24057 Sh3yl1 ucuuUCGUAA-GGGUAC-AAUUUCa ||: || :|::|| |||||| uugcAGUUUUGUCUGUGAUUAAAGc 2 20 843 867 [mm9:12:31609656-31609680:+] 0.7048 126 6 -10.90 -0.1509 MIMAT0003726 mmu-miR-675-3p 24057 Sh3yl1 ugacucgccaauccCGUAUGUc |||||:| aaaauauuuucucuGCAUAUAa 2 9 119 140 [mm9:12:31644978-31644999:+] 0.5568 124 0 -5.30 -0.1871 MIMAT0003734 mmu-miR-667 24057 Sh3yl1 gaacccgacccaccGUCCACAgu ||||||| caaauguuuuuaucCAGGUGUaa 3 10 98 120 [mm9:12:31644957-31644979:+] 0.5568 125 0 -11.34 -0.1981 MIMAT0003892 mmu-miR-762 24057 Sh3yl1 cgaGACAGGGCCGGGGUCGGgg ||| : :||||||| aaaCUGGAAUUUUCCCAGCCaa 3 20 1686 1707 [mm9:12:31644819-31644840:+] 0.7837 127 0 -21.98 -0.1246 MIMAT0004188 mmu-miR-802 24057 Sh3yl1 uuccUACUUAGAAACAAUGAcu ||| :||||||||| guucAUGCUAUUUUGUUACUug 3 19 2 23 [mm9:12:31644861-31644882:+] 0.5614 142 0 -12.19 -0.2429 MIMAT0004188 mmu-miR-802 24057 Sh3yl1 uuccUACUUAGAAAC-AAUGACu | || || || |||||| agacAGGAUUCACUGUUUACUGc 2 19 50 72 [mm9:12:31644909-31644931:+] 0.5683 122 6 -12.64 -0.6747 MIMAT0004188 mmu-miR-802 24057 Sh3yl1 uuccUACUUAGAAACAAUGAcu ||| :||||||||| guucAUGCUAUUUUGUUACUug 3 19 1728 1749 [mm9:12:31644861-31644882:+] 0.5614 142 0 -12.19 -0.1014 MIMAT0004188 mmu-miR-802 24057 Sh3yl1 uuccUACUUAGAAAC-AAUGACu | || || || |||||| agacAGGAUUCACUGUUUACUGc 2 19 1776 1798 [mm9:12:31644909-31644931:+] 0.5683 122 6 -12.64 -0.3246 MIMAT0014815 mmu-miR-3099* 24057 Sh3yl1 guucccGACCUUCCUUCGACc |||||||||||||| aucuccCUGGAAGGAAGCUGu 2 16 1187 1207 [mm9:12:31625235-31625255:+] 0.7122 175 7 -27.34 -0.2750 MIMAT0003477 mmu-miR-669a 24057 Sh3yl1 uguACUUGUACGUGUGUGUUga ||| || :|||||| acuUGAUAAU---UACACAAaa 3 20 19 37 [mm9:12:31644878-31644896:+] 0.5797 123 0 -8.55 -0.5010 MIMAT0003477 mmu-miR-669a 24057 Sh3yl1 uguACUUGUACGUGUGUGUUga ||| || :|||||| acuUGAUAAU---UACACAAaa 3 20 1745 1763 [mm9:12:31644878-31644896:+] 0.5797 123 0 -8.55 -0.2169 MIMAT0003897 mmu-miR-759 24057 Sh3yl1 caGUUUUAACAAACGUGAGACg |::: | | | ||||||| ccCGGGCUAGCGUUCACUCUGa 2 21 33 54 [mm9:12:31596566-31596587:+] 0.5012 148 7 -13.34 -0.2738 MIMAT0003451 mmu-miR-677 24057 Sh3yl1 agucuucGAUUA--GUAGUGACUu :|||| | ||||||| gaaauucUUAAUUCCUUCACUGAg 2 16 1316 1339 [mm9:12:31626911-31626934:+] 0.6944 150 7 -13.20 -0.9536 MIMAT0003462 mmu-miR-684 24057 Sh3yl1 aacugAACUUCCCUUUUGa | |:| ||||||| auuggUGGGAAGGAAAACu 2 15 1659 1677 [mm9:12:31644792-31644810:+] 0.7837 150 7 -17.95 -0.9767 MIMAT0003464 mmu-miR-686 24057 Sh3yl1 agaaguggcagaccCUUCGUUa ||||||| cuaaucugaaaucaGAAGCAAa 2 9 723 744 [mm9:12:31607118-31607139:+] 0.7901 140 7 -11.33 -1.1299 MIMAT0003471 mmu-miR-692 24057 Sh3yl1 cucacuccgcgaguUUCUCUa |||||| gcugccaaaauauuAAGAGAa 2 8 749 769 [mm9:12:31607144-31607164:+] 0.7901 120 6 -7.19 -0.4050 MIMAT0003474 mmu-miR-694 24057 Sh3yl1 gaaguccgUUGUAAAAGuc ||:|||||| agguguaaAAUAUUUUCuc 3 12 113 131 [mm9:12:31644972-31644990:+] 0.5568 131 0 -8.49 -0.1005 MIMAT0003474 mmu-miR-694 24057 Sh3yl1 gaaGUCCGUUG----UAAAAGUc |||| :|| ||||||| agcCAGGAGACUUGAAUUUUCAa 2 17 1590 1612 [mm9:12:31644723-31644745:+] 0.7837 147 7 -10.74 -0.9558 MIMAT0003476 mmu-miR-669b 24057 Sh3yl1 uguACGUGUACGUGUGUUUUga || |:| :|||||||| acuUG-AUAAUUACACAAAAau 3 20 19 39 [mm9:12:31644878-31644898:+] 0.5797 137 0 -10.43 -0.1500 MIMAT0003487 mmu-miR-697 24057 Sh3yl1 agaggugUCCUGGUCCUACAa ||||::||||||| agcagggAGGAUUAGGAUGUg 2 15 139 159 [mm9:12:31596672-31596692:+] 0.5012 162 7 -21.84 -0.1261 MIMAT0003488 mmu-miR-698 24057 Sh3yl1 ucccuuccuuugCUCUUAc |||||| ccaaaauauuaaGAGAAUu 2 8 753 771 [mm9:12:31607148-31607166:+] 0.7901 120 6 -5.05 -0.1432 MIMAT0003498 mmu-miR-708* 24057 Sh3yl1 gaUCUUCGAGUGUCAG-AUCAAc ||:|| || | || ||||| gcAGGAG-ACAGAAUCAUAGUUa 2 21 1613 1634 [mm9:12:31644746-31644767:+] 0.7837 122 0 -12.20 -1.2625 MIMAT0003500 mmu-miR-710 24057 Sh3yl1 gaGUUGAGAGGGGUUCUGAACc |||| || :||||||| gaCAAC-AGCCAGGAGACUUGa 2 21 1584 1604 [mm9:12:31644717-31644737:+] 0.7837 150 7 -20.10 -0.7890 MIMAT0003500 mmu-miR-710 24057 Sh3yl1 gaguugagaggggUUCUGAACc |||||||| agaccagggaagaAAGACUUGa 2 10 584 605 [mm9:12:31597846-31597867:+] 0.4972 145 7 -11.14 -0.4202 MIMAT0003502 mmu-miR-712 24057 Sh3yl1 ccaUGGCGGGCCCACU-UCCUc :|:|:|:| ||| |||| gaaGCUGUCUGAUUGAGAGGAa 2 19 1200 1221 [mm9:12:31625248-31625269:+] 0.7122 122 0 -17.51 -1.0095 MIMAT0003510 mmu-miR-717 24057 Sh3yl1 ucUCUUCCAUAGAGACAGACUc :||||| | |||||||| cuGGAAGGAA--GCUGUCUGAu 2 21 1193 1212 [mm9:12:31625241-31625260:+] 0.7122 157 7 -20.21 -0.3586 MIMAT0003511 mmu-miR-450b-5p 24057 Sh3yl1 auAAGUCCUUGUAUGACGUUUu |||| :: ||||||||| gaUUCA-CUGUUUACUGCAAAc 2 21 56 76 [mm9:12:31644915-31644935:+] 0.5683 154 7 -13.79 -0.7874 MIMAT0003511 mmu-miR-450b-5p 24057 Sh3yl1 auaAGUCCUUGU----AU--GACGUUUu ||| | ||| |: ||||||| acgUCAAGCACACCCUUGCUCUGCAAAu 2 20 75 102 [mm9:12:31644934-31644961:+] 0.5568 141 7 -11.89 -0.6833 MIMAT0003511 mmu-miR-450b-5p 24057 Sh3yl1 auAAGUCCUUGUAUGACGUUUu |||| :: ||||||||| gaUUCA-CUGUUUACUGCAAAc 2 21 1782 1802 [mm9:12:31644915-31644935:+] 0.5683 154 7 -13.79 -0.4158 MIMAT0003511 mmu-miR-450b-5p 24057 Sh3yl1 auaAGUCCUUGU----AU--GACGUUUu ||| | ||| |: ||||||| acgUCAAGCACACCCUUGCUCUGCAAAu 2 20 1801 1828 [mm9:12:31644934-31644961:+] 0.5568 141 7 -11.89 -0.3333 MIMAT0004841 mmu-miR-871 24057 Sh3yl1 guaCU-GACCGUGAUU-AGACUUAu || :|||:: ||| ||||||| uccGAUUUGGUGAUAAUUCUGAAUu 2 21 998 1022 [mm9:12:31624442-31624466:+] 0.7434 162 7 -16.06 -0.9818 MIMAT0004848 mmu-miR-883a-5p 24057 Sh3yl1 cauugacgAUGAAGAGAGUCGu || ||:|||| || guguaaaaUA-UUUUCUCUGCa 2 15 115 135 [mm9:12:31644974-31644994:+] 0.5568 120 0 -13.81 -0.1382 MIMAT0004849 mmu-miR-883a-3p 24057 Sh3yl1 uaUGACUCUCGACAACGUCAAu :|| | || | |||||||| aaGCU-AAAGGUCUUGCAGUUu 2 21 831 851 [mm9:12:31609644-31609664:+] 0.7048 158 7 -12.59 -0.6403 MIMAT0004851 mmu-miR-883b-3p 24057 Sh3yl1 uaUGACUCUCUACAACGUCAAu :|| | ||:| |||||||| aaGCU-AAAGGUCUUGCAGUUu 2 21 831 851 [mm9:12:31609644-31609664:+] 0.7048 162 7 -15.07 -0.6403 MIMAT0005833 mmu-miR-669d 24057 Sh3yl1 uguauAUGUAC-GU--GUGUGUUca ||| || :| :|||||| uuuguUACUUGAUAAUUACACAAaa 3 18 13 37 [mm9:12:31644872-31644896:+] 0.5797 127 0 -8.21 -0.5010 MIMAT0005833 mmu-miR-669d 24057 Sh3yl1 uguauAUGUAC-GU--GUGUGUUca ||| || :| :|||||| uuuguUACUUGAUAAUUACACAAaa 3 18 1739 1763 [mm9:12:31644872-31644896:+] 0.5797 127 0 -8.21 -0.2169 MIMAT0005860 mmu-miR-1199 24057 Sh3yl1 ggcgcgCUGGCCCUGAGUcu |||| |||||| aucaaaGACC--GACUCAaa 3 15 1636 1653 [mm9:12:31644769-31644786:+] 0.7837 127 0 -13.33 -0.1124 MIMAT0007873 mmu-miR-1896 24057 Sh3yl1 gagGAGUGGGUGGUAGU-CUCUc ||: |: :|:|||| |||| gagCUUUCUAGCUAUCAUGAGAa 2 20 1508 1530 [mm9:12:31643742-31643764:+] 0.6466 127 0 -16.67 -1.0767 MIMAT0007874 mmu-miR-1904 24057 Sh3yl1 ggagGGAGGUCUCCUCGUCUUg ||| | | ||||||| gcagCCUGCUCA--AGCAGAAg 2 19 1288 1307 [mm9:12:31626883-31626902:+] 0.6944 143 7 -14.90 -0.4459 MIMAT0007874 mmu-miR-1904 24057 Sh3yl1 ggaGGGAGGUC-UCCUC-GUCUUg :::|| || ||||| ||||| gaaUUUUCAAGCAGGAGACAGAAu 2 20 1603 1626 [mm9:12:31644736-31644759:+] 0.7837 130 0 -20.18 -0.8670 MIMAT0009390 mmu-miR-1927 24057 Sh3yl1 agucagggAUUGUAGGUCUCCAg ||: | :|||||| auuugaaaUAGGA-AUAGAGGUa 2 16 976 997 [mm9:12:31611721-31611739,31624439-31624441:+] 0.7411 125 6 -12.47 -0.1037 MIMAT0009398 mmu-miR-1934 24057 Sh3yl1 ucUCCUGCUUCGUCCCCUGGUCu || | | :|:| ||||||| ugAGCAAG-GGUAUAGGACCAGu 2 22 379 400 [mm9:12:31596912-31596933:+] 0.5012 151 7 -19.63 -0.3302 MIMAT0009399 mmu-miR-1935 24057 Sh3yl1 ucucuaggcggucGGAGACGga :|||||| guguaaaauauuuUCUCUGCau 3 10 115 136 [mm9:12:31644974-31644995:+] 0.5568 121 0 -10.81 -0.3330 MIMAT0009399 mmu-miR-1935 24057 Sh3yl1 ucucuaggcggucGGAGACGga :|||||| guguaaaauauuuUCUCUGCau 3 10 1841 1862 [mm9:12:31644974-31644995:+] 0.5568 121 0 -10.81 -0.1286 MIMAT0009405 mmu-miR-1941-5p 24057 Sh3yl1 uuCGGAGACAUGGUCGUAGAGGGa |||||| |:|::|:||||||| ggGCCUCUUUGCUGGUAUCUCCCu 2 23 1171 1194 [mm9:12:31625219-31625242:+] 0.7122 186 7 -37.85 -0.2899 MIMAT0009409 mmu-miR-1944 24057 Sh3yl1 uuagucuugaacuguaagucGUGUCUc |||||| gccaaaauauuaagagaauuCACAGAa 2 8 752 778 [mm9:12:31607147-31607173:+] 0.7901 120 6 -9.95 -0.4376 MIMAT0009411 mmu-miR-1306 24057 Sh3yl1 guagUGGUGGUCUCGGUUGca |:: :| ||||||| uggaAUUUUCCCAGCCAACua 3 18 1690 1710 [mm9:12:31644823-31644843:+] 0.7837 129 0 -12.78 -0.1250 MIMAT0009418 mmu-miR-669l 24057 Sh3yl1 uguauAUGUAC-GU--GUGUGUUga ||| || :| :|||||| uuuguUACUUGAUAAUUACACAAaa 3 18 13 37 [mm9:12:31644872-31644896:+] 0.5797 127 0 -9.37 -0.5010 MIMAT0009418 mmu-miR-669l 24057 Sh3yl1 uguauAUGUAC-GU--GUGUGUUga ||| || :| :|||||| uuuguUACUUGAUAAUUACACAAaa 3 18 1739 1763 [mm9:12:31644872-31644896:+] 0.5797 127 0 -9.37 -0.2169 MIMAT0009423 mmu-miR-1952 24057 Sh3yl1 gucuuccucCCACCUCu ||||||| gcugggcuuGGUGGAGg 2 9 959 975 [mm9:12:31611704-31611720:+] 0.7388 140 7 -17.22 -0.5577 MIMAT0009424 mmu-miR-1953 24057 Sh3yl1 gucuucgGACUCUUGAAAGGGu ||| |||:|||||| ggucaaaCUG-GAAUUUUCCCa 2 16 1682 1702 [mm9:12:31644815-31644835:+] 0.7837 145 6 -21.68 -0.1205 MIMAT0009425 mmu-miR-1954 24057 Sh3yl1 uugucccaGAGUGAGACGUca :|: ||||||| guaaaauaUUUUCUCUGCAua 3 14 117 137 [mm9:12:31644976-31644996:+] 0.5568 129 0 -10.50 -0.3348 MIMAT0009425 mmu-miR-1954 24057 Sh3yl1 uugucccaGAGUGAGACGUca :|: ||||||| guaaaauaUUUUCUCUGCAua 3 14 1843 1863 [mm9:12:31644976-31644996:+] 0.5568 129 0 -10.50 -0.1295 MIMAT0009427 mmu-miR-669n 24057 Sh3yl1 ugugugUAGGUGUGUGUUUa || :||||||| uacuugAUAAUUACACAAAa 2 15 18 37 [mm9:12:31644877-31644896:+] 0.5797 142 7 -8.85 -1.3331 MIMAT0009427 mmu-miR-669n 24057 Sh3yl1 ugugugUAGGUGUGUGUUUa || :||||||| uacuugAUAAUUACACAAAa 2 15 1744 1763 [mm9:12:31644877-31644896:+] 0.5797 142 7 -8.85 -1.2625 MIMAT0009444 mmu-miR-1970 24057 Sh3yl1 guuUCGGAUAGGGGUCACUGUgu | || || ||||||| aucAACCAAU-AGAAGUGACAgc 3 21 1545 1566 [mm9:12:31644678-31644699:+] 0.7837 126 0 -13.99 -0.1765 MIMAT0009445 mmu-miR-1274a 24057 Sh3yl1 accGCGGACUUGUCCCUGGACu | :|| :| | ||||||| uaaCUUCUAGAAAUGGACCUGa 2 20 780 801 [mm9:12:31607175-31607196:+] 0.7556 155 7 -20.37 -1.2085 MIMAT0009455 mmu-miR-1983 24057 Sh3yl1 ucuUUUGUACG---AGGUCCACuc |||::| : |||||||| ugcAAAUGUUUUUAUCCAGGUGua 3 19 96 119 [mm9:12:31644955-31644978:+] 0.5568 133 0 -15.73 -0.2334 MIMAT0011216 mmu-miR-2140 24057 Sh3yl1 ugguggUUCUAGACGUGGa | |:|||||||| uggaaaAUGGUCUGCACCu 2 14 925 943 [mm9:12:31609738-31609742,31611675-31611688:+] 0.6000 153 7 -19.52 -0.2583 MIMAT0011217 mmu-miR-2141 24057 Sh3yl1 uugaaaagacuGUGGAGGa ||||||| cuugaaguaacCACCUCCa 2 9 601 619 [mm9:12:31597863-31597881:+] 0.4972 140 7 -12.89 -0.2026 MIMAT0012772 mmu-miR-599 24057 Sh3yl1 caAACUAUUUGACUGUGUu ||||||| | ||||| acUUGAUAA--UUACACAa 2 18 19 35 [mm9:12:31644878-31644894:+] 0.5797 130 0 -11.37 -0.1333 MIMAT0012774 mmu-miR-664 24057 Sh3yl1 auccGACCCCUCA--UUUACUUAu | ||| | | |||||||| cuccCAGGGUAAUAGAAAUGAAUa 2 19 1471 1494 [mm9:12:31627726-31627733,31643713-31643728:+] 0.6114 153 7 -13.42 -0.9997 MIMAT0015642 mmu-miR-3471 24057 Sh3yl1 uuaCGGAAUGUCAACC-UAGAGu |||| : | ||| ||||| gggGCCUCUUUGCUGGUAUCUCc 2 20 1170 1192 [mm9:12:31625218-31625240:+] 0.7122 123 0 -15.58 -0.1253 MIMAT0015646 mmu-miR-3474 24057 Sh3yl1 cuuaggUGCAGAGGAGGGUCCc |:| : |||||||| agcugaAUGCUGGCUCCCAGGg 2 17 1458 1479 [mm9:12:31627713-31627733,31643713-31643713:+] 0.6114 148 7 -25.37 -0.1491 MIMAT0000128 mmu-miR-30a 24057 Sh3yl1 gaagGUCAGCUCCU-----ACAAAUGu ||| | |||| ||||||| uacaCAGAC-AGGAUUCACUGUUUACu 2 19 45 70 [mm9:12:31644904-31644929:+] 0.5683 143 7 -13.76 -0.5681 MIMAT0000128 mmu-miR-30a 24057 Sh3yl1 gaagGUCAGCUCCU-----ACAAAUGu ||| | |||| ||||||| uacaCAGAC-AGGAUUCACUGUUUACu 2 19 1771 1796 [mm9:12:31644904-31644929:+] 0.5683 143 7 -13.76 -0.2514 MIMAT0000130 mmu-miR-30b 24057 Sh3yl1 ucgacucacauccuACAAAUGu ||||||| cagacaggauucacUGUUUACu 2 9 49 70 [mm9:12:31644908-31644929:+] 0.5683 140 7 -9.46 -0.5681 MIMAT0000130 mmu-miR-30b 24057 Sh3yl1 ucgacucacauccuACAAAUGu ||||||| cagacaggauucacUGUUUACu 2 9 1775 1796 [mm9:12:31644908-31644929:+] 0.5683 140 7 -9.46 -0.2514 MIMAT0000157 mmu-miR-145 24057 Sh3yl1 ucccuAAGGACCCUUUUGACCUg ||| || |||||||| aaaacUUCGAGGUCAAACUGGAa 2 19 1672 1694 [mm9:12:31644805-31644827:+] 0.7837 158 7 -15.87 -0.8844 MIMAT0000157 mmu-miR-145 24057 Sh3yl1 ucccuaAGGACCCUUUUGACCug || || ||||||||| uagcuaUCAUGAGAAAACUGGca 3 18 1516 1538 [mm9:12:31643750-31643769,31644669-31644671:+] 0.7151 149 0 -16.03 -0.1880 MIMAT0000164 mmu-miR-154 24057 Sh3yl1 gcuuccgUUGUGCC-UAU-UGGAu |||| || ||| |||| uggcaaaAACAGGGCAUACACCUa 2 16 409 432 [mm9:12:31596942-31596965:+] 0.5038 122 0 -17.76 -0.1789 MIMAT0000165 mmu-miR-155 24057 Sh3yl1 uggGGAUAGUGUUA--AUCGUAAUu || || : |:| ||||||| caaCCAAUAGAAGUGACAGCAUUAu 2 21 1547 1571 [mm9:12:31644680-31644704:+] 0.7837 147 7 -12.78 -0.8270 MIMAT0000209 mmu-miR-129-5p 24057 Sh3yl1 cguucgggucuggcGUUUUUc |||||| acuugauaauuacaCAAAAAu 2 8 19 39 [mm9:12:31644878-31644898:+] 0.5797 120 6 -3.36 -0.1834 MIMAT0000209 mmu-miR-129-5p 24057 Sh3yl1 cguucgggucuggCGUUUUUc ||||||| agugaucgcuuugGCAAAAAc 2 9 398 418 [mm9:12:31596931-31596951:+] 0.5012 140 7 -8.10 -0.1258 MIMAT0000211 mmu-miR-182 24057 Sh3yl1 gccacacucaagaugguaACGGUUu |||||| aucagaagcaaagaaggcUGCCAAa 2 8 733 757 [mm9:12:31607128-31607152:+] 0.7901 120 6 -12.53 -0.2009 MIMAT0000215 mmu-miR-186 24057 Sh3yl1 ucggguuuUCCUCUUAAGAAac | || ||||||| agaucuuuAUGA-AAUUCUUaa 3 15 1306 1326 [mm9:12:31626901-31626921:+] 0.6944 128 0 -5.61 -0.1076 MIMAT0000224 mmu-miR-194 24057 Sh3yl1 agguGUACCUCAACGACAAUGu |||| || :|||||| aguuCAUGCUAUU-UUGUUACu 2 19 1 21 [mm9:12:31644860-31644880:+] 0.5614 136 6 -10.24 -0.1394 MIMAT0000224 mmu-miR-194 24057 Sh3yl1 aggUGUACCUCAACGAC-AAUGu ||| ||| | ||| |||| cagACA-GGAUUCACUGUUUACu 2 20 49 70 [mm9:12:31644908-31644929:+] 0.5683 121 0 -10.84 -0.5236 MIMAT0000224 mmu-miR-194 24057 Sh3yl1 aggUGUACCUCAACGAC-AAUGu ||| ||| | ||| |||| cagACA-GGAUUCACUGUUUACu 2 20 1775 1796 [mm9:12:31644908-31644929:+] 0.5683 121 0 -10.84 -0.2248 MIMAT0000236 mmu-miR-203 24057 Sh3yl1 gaucaccAGGAUUU-GUA-AAGUg ||| ||| ||| |||| aauuaccUCCAAAACCAUCUUCAa 2 16 1407 1430 [mm9:12:31627662-31627685:+] 0.6221 122 0 -7.28 -0.2827 MIMAT0000248 mmu-miR-30e 24057 Sh3yl1 gaagGUCAGUUC---CU-ACAAAUGu ||| ||:| | ||||||| uacaCAGACAGGAUUCACUGUUUACu 2 19 45 70 [mm9:12:31644904-31644929:+] 0.5683 144 7 -13.76 -0.5609 MIMAT0000248 mmu-miR-30e 24057 Sh3yl1 gaagGUCAGUUC---CU-ACAAAUGu ||| ||:| | ||||||| uacaCAGACAGGAUUCACUGUUUACu 2 19 1771 1796 [mm9:12:31644904-31644929:+] 0.5683 144 7 -13.76 -0.2470 MIMAT0000514 mmu-miR-30c 24057 Sh3yl1 cgaCUCUCACAUCCUACAAAUGu || || | ||||||| acaGACAGGAUUCACUGUUUACu 2 21 48 70 [mm9:12:31644907-31644929:+] 0.5683 144 7 -9.69 -0.5681 MIMAT0000514 mmu-miR-30c 24057 Sh3yl1 cgaCUCUCACAUCCUACAAAUGu || || | ||||||| acaGACAGGAUUCACUGUUUACu 2 21 1774 1796 [mm9:12:31644907-31644929:+] 0.5683 144 7 -9.69 -0.2514 MIMAT0000515 mmu-miR-30d 24057 Sh3yl1 gaaggucagccccuACAAAUGu ||||||| cagacaggauucacUGUUUACu 2 9 49 70 [mm9:12:31644908-31644929:+] 0.5683 140 7 -10.49 -0.5681 MIMAT0000515 mmu-miR-30d 24057 Sh3yl1 gaaggucagccccuACAAAUGu ||||||| cagacaggauucacUGUUUACu 2 9 1775 1796 [mm9:12:31644908-31644929:+] 0.5683 140 7 -10.49 -0.2514 MIMAT0000528 mmu-miR-18a 24057 Sh3yl1 gauagacgUGAUC-UACGUGGAAu | |:| |||||||| ggauggaaAAUGGUCUGCACCUUc 2 16 922 945 [mm9:12:31609735-31609742,31611675-31611690:+] 0.6462 146 7 -14.83 -0.2139 MIMAT0000530 mmu-miR-21 24057 Sh3yl1 aguuguagucagacUAUUCGAu ||||||| uaauagaaaugaauAUAAGCUa 2 9 1480 1501 [mm9:12:31643714-31643735:+] 0.6466 140 7 -10.46 -1.0896 MIMAT0000533 mmu-miR-26a 24057 Sh3yl1 ucgGAUAGGACCUAAUGAACUu ||||::|| |||||||| augCUAUUUUG--UUACUUGAu 2 20 6 25 [mm9:12:31644865-31644884:+] 0.5614 164 7 -16.93 -1.2019 MIMAT0000533 mmu-miR-26a 24057 Sh3yl1 ucgGAUAGGACCUAAUGAACUu ||||::|| |||||||| augCUAUUUUG--UUACUUGAu 2 20 1732 1751 [mm9:12:31644865-31644884:+] 0.5614 164 7 -16.93 -1.0469 MIMAT0000533 mmu-miR-26a 24057 Sh3yl1 ucggaUAGGACCUAAUGAACUu | || ||| |||||| acaacAGCCAGGA-GACUUGAa 2 18 1585 1605 [mm9:12:31644718-31644738:+] 0.7837 123 6 -14.53 -0.1011 MIMAT0000534 mmu-miR-26b 24057 Sh3yl1 ugGAUAGGACUUAAUGAACUu ||||::|| |||||||| ugCUAUUUUG--UUACUUGAu 2 20 7 25 [mm9:12:31644866-31644884:+] 0.5614 164 7 -16.93 -1.2019 MIMAT0000534 mmu-miR-26b 24057 Sh3yl1 ugGAUAGGACUUAAUGAACUu ||||::|| |||||||| ugCUAUUUUG--UUACUUGAu 2 20 1733 1751 [mm9:12:31644866-31644884:+] 0.5614 164 7 -16.93 -1.0469 MIMAT0000534 mmu-miR-26b 24057 Sh3yl1 uggauaggacuuaaUGAACUu |||||| acaacagccaggagACUUGAa 2 8 1585 1605 [mm9:12:31644718-31644738:+] 0.7837 120 6 -11.95 -0.1093 MIMAT0000541 mmu-miR-96 24057 Sh3yl1 ucguuuuuacacgaucACGGUUu |||||| cagaagcaaagaaggcUGCCAAa 2 8 735 757 [mm9:12:31607130-31607152:+] 0.7901 120 6 -18.25 -0.1935 MIMAT0000548 mmu-miR-322 24057 Sh3yl1 agGUUUUGUACUUAACGA-CGAc :| |:| |||| |||| ||| ugUACAGC-UGAA-UGCUGGCUc 2 21 1453 1473 [mm9:12:31627708-31627728:+] 0.5763 120 0 -11.48 -0.1462 MIMAT0000582 mmu-miR-338-3p 24057 Sh3yl1 guuguuuuagUGAC-UACGACCu :||| ||||||| caccuguacaGCUGAAUGCUGGc 2 13 1449 1471 [mm9:12:31627704-31627726:+] 0.5763 147 7 -16.89 -0.1075 MIMAT0004651 mmu-miR-340-5p 24057 Sh3yl1 uuagucagaguaacGAAAUAUu ||||||: cucaagcagaagauCUUUAUGa 2 9 1296 1317 [mm9:12:31626891-31626912:+] 0.6944 124 0 -8.19 -0.1462 MIMAT0000661 mmu-miR-214 24057 Sh3yl1 ugaCGGACAGACACGGACGACa | :| | | | ||||||| acaGGUUCUGUAUUCCUGCUGg 2 20 678 699 [mm9:12:31597940-31597961:+] 0.5435 151 7 -21.55 -0.4979 MIMAT0000663 mmu-miR-218 24057 Sh3yl1 uguACCAAUCUAGUUCGUGUu || | :||||||||| uacUGCAAACGUCAAGCACAc 2 19 67 87 [mm9:12:31644926-31644946:+] 0.5568 154 7 -13.74 -0.2852 MIMAT0000663 mmu-miR-218 24057 Sh3yl1 uguACCAAUCUAGUUCGUGUu || | :||||||||| uacUGCAAACGUCAAGCACAc 2 19 1793 1813 [mm9:12:31644926-31644946:+] 0.5568 154 7 -13.74 -0.1072 MIMAT0003151 mmu-miR-378 24057 Sh3yl1 ggaagacUGAGGUUCAGGUCa ||| ||||||||| uucacauACUGCAAGUCCAGg 2 15 1151 1171 [mm9:12:31625199-31625219:+] 0.7122 162 7 -20.50 -0.1515 MIMAT0004745 mmu-miR-384-5p 24057 Sh3yl1 uguaacggaUCCU---UAACAAAUGu |||| | ||||||| uacacagacAGGAUUCACUGUUUACu 2 15 45 70 [mm9:12:31644904-31644929:+] 0.5683 145 7 -12.27 -0.5790 MIMAT0004745 mmu-miR-384-5p 24057 Sh3yl1 uguaacggaUCCU---UAACAAAUGu |||| | ||||||| uacacagacAGGAUUCACUGUUUACu 2 15 1771 1796 [mm9:12:31644904-31644929:+] 0.5683 145 7 -12.27 -0.2582 MIMAT0001091 mmu-miR-410 24057 Sh3yl1 uguccggUAGACACAAUAUAa ||| ||||||| agacagaAUCAUAGUUAUAUc 2 15 1618 1638 [mm9:12:31644751-31644771:+] 0.7837 146 7 -11.63 -1.1414 MIMAT0001092 mmu-miR-376b 24057 Sh3yl1 uucaccuacaaggaGAUACUa |||||| agccaacuauguaaCUAUGAa 2 8 1702 1722 [mm9:12:31644835-31644855:+] 0.6634 120 6 -7.87 -0.2586 MIMAT0001420 mmu-miR-433 24057 Sh3yl1 uguggcuccUCGGGUAGUACUa || |:||||||| gagcuuucuAG-CUAUCAUGAg 2 14 1508 1528 [mm9:12:31643742-31643762:+] 0.6466 147 7 -13.19 -0.5905 MIMAT0001533 mmu-miR-448 24057 Sh3yl1 uaccCUGUAGGA-UGUAU-ACGUu | |:||:| ||||| |||| cgcaGCCGUCUUCACAUACUGCAa 2 19 1141 1164 [mm9:12:31625189-31625212:+] 0.7122 129 0 -16.62 -0.3352 MIMAT0001632 mmu-miR-451 24057 Sh3yl1 uuGAGUCAUUACCAUUGCCAAa | :| ||| ||:|||| ugCAUAUAAAU--AAAUGGUUa 2 21 132 151 [mm9:12:31644991-31645010:+] 0.5568 125 0 -6.54 -0.1061 MIMAT0003169 mmu-miR-539 24057 Sh3yl1 ugUGUGGUUCCUAUUAAAGAgg ||| ||| || |||||| uuACA-CAAAAAU-AUUUCUac 3 21 28 47 [mm9:12:31644887-31644906:+] 0.5797 136 0 -8.99 -0.1014 MIMAT0003183 mmu-miR-376c 24057 Sh3yl1 ugcacuuuaaaggaGAUACAa |||||| auuuucccagccaaCUAUGUa 2 8 1694 1714 [mm9:12:31644827-31644847:+] 0.7837 120 6 -7.67 -0.1291 MIMAT0003730 mmu-miR-592 24057 Sh3yl1 ugUAGU-AGCGUAUAACUGUGUUa :|:| |:| ||| | |||||| uuGUUACUUG-AUAAUUACACAAa 2 22 14 36 [mm9:12:31644873-31644895:+] 0.5797 130 6 -8.26 -0.6635 MIMAT0003730 mmu-miR-592 24057 Sh3yl1 ugUAGU-AGCGUAUAACUGUGUUa :|:| |:| ||| | |||||| uuGUUACUUG-AUAAUUACACAAa 2 22 1740 1762 [mm9:12:31644873-31644895:+] 0.5797 130 6 -8.26 -0.2549 MIMAT0003893 mmu-miR-761 24057 Sh3yl1 acacaGUCAAAG---U-GGGACGACg ||| ||| | :||||||| gugaaCAGGUUCUGUAUUCCUGCUGg 2 18 674 699 [mm9:12:31597936-31597961:+] 0.5280 147 7 -21.60 -0.4745 MIMAT0003450 mmu-miR-488 24057 Sh3yl1 cugguUCUUUGUCGGAAA-GUu || |: ||||||| || agagcAGUAGAAGCCUUUGCAa 2 17 1028 1049 [mm9:12:31624472-31624493:+] 0.7434 124 0 -16.82 -0.5449 MIMAT0003456 mmu-miR-495 24057 Sh3yl1 uucuUCACGUG-GUACAAACAAa ||| ||: | |||||| ----AGUUCAUGCUAUUUUGUUa 2 19 1 19 [mm9:12:31644860-31644878:+] 0.5614 121 6 -6.94 -0.2923 MIMAT0004828 mmu-miR-708 24057 Sh3yl1 ggGUCGAUCUAACAU-UC-GAGGAa :||| :| ||| | || ||||| gaUAGC-GGCUUGCAGAGCCUCCUa 2 22 183 206 [mm9:12:31596716-31596739:+] 0.5012 122 0 -15.20 -0.1237 MIMAT0003780 mmu-miR-490 24057 Sh3yl1 gucgUACCUCAGGAGGUCCAac ||| |: ||||||| gcaaAUGUUUUUAUCCAGGUgu 3 19 97 118 [mm9:12:31644956-31644977:+] 0.5568 134 0 -14.53 -0.1994 MIMAT0003783 mmu-miR-615-3p 24057 Sh3yl1 uuCUCCCUCUGGGUCCG--AGCCu |:| |:|:|::|||| |||| gaGGGCGGGGCUUAGGCGUUCGGg 2 21 2 25 [mm9:12:31596535-31596558:+] 0.4935 120 0 -30.49 -0.1253 MIMAT0004853 mmu-miR-874 24057 Sh3yl1 agCCAGGGAGCCCG-----GUCCCGUc | || ||: ||| ||||||| guGAUCGCUUUGGCAAAAACAGGGCAu 2 21 399 425 [mm9:12:31596932-31596958:+] 0.5012 147 7 -22.49 -0.3970 MIMAT0004858 mmu-miR-18b 24057 Sh3yl1 gaUUGUC-GUGAUC-UACGUGGAAu :|::| | |:| |||||||| cgGAUGGAAAAUGGUCUGCACCUUc 2 22 921 945 [mm9:12:31609734-31609742,31611675-31611690:+] 0.6462 147 7 -15.42 -0.2139 MIMAT0004869 mmu-miR-421 24057 Sh3yl1 cgcgggUUAAUU--ACAGAC-AACUa || || |||||| |||| cccuggAAGGAAGCUGUCUGAUUGAg 2 18 1191 1216 [mm9:12:31625239-31625264:+] 0.7122 120 0 -14.37 -0.4952 MIMAT0004895 mmu-miR-590-5p 24057 Sh3yl1 gacgugaaaaUACU--UAUUCGAg |||| ||||||| gguaauagaaAUGAAUAUAAGCUa 2 13 1478 1501 [mm9:12:31627733-31627733,31643713-31643735:+] 0.6114 147 7 -10.73 -1.0408 MIMAT0004937 mmu-miR-875-5p 24057 Sh3yl1 guggacUAU-UUUGACUCCAUAu ||| :||: ||||||| uuugaaAUAGGAAUAGAGGUAUc 2 17 977 999 [mm9:12:31611722-31611739,31624439-31624443:+] 0.7411 155 7 -13.06 -0.7946 MIMAT0005850 mmu-miR-1192 24057 Sh3yl1 uuaaaccagacaaacAAACAAa |||||| ---aguucaugcuauUUUGUUa 2 8 1 19 [mm9:12:31644860-31644878:+] 0.5614 120 6 -3.53 -0.2974

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G065896 Sh3yl1 Mus musculus 24057

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Sh3yl1 mmu-miR-218 beg:74 end:87 pic:3' TGTACCAATCTAGTTCGTGTT 5'& .||||||||| &5' ----------GTCAAGCACA- 3' Sh3yl1 mmu-miR-26a beg:6 end:25 pic:3' TCGGATAGGACCTAATGAACTT 5'& ||||..|| |||||||| &5' ---CTATTTTG--TTACTTGA- 3' Sh3yl1 mmu-miR-26b beg:6 end:25 pic:3' TGGATAGGACTTAATGAACTT 5'& ||||..|| |||||||| &5' --CTATTTTG--TTACTTGA- 3' Sh3yl1 mmu-miR-30a beg:50 end:70 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& ||| ||||||| &5' ----CAGGATTCACTGTTTAC- 3' Sh3yl1 mmu-miR-30b beg:51 end:70 pic:3' TCGACTCACATCCT-----ACAAATGT 5'& |||| ||||||| &5' ----------AGGATTCACTGTTTAC- 3' Sh3yl1 mmu-miR-30c beg:51 end:70 pic:3' CGACTCTCACATCCT-----ACAAATGT 5'& |||| ||||||| &5' -----------AGGATTCACTGTTTAC- 3' Sh3yl1 mmu-miR-30d beg:50 end:70 pic:3' GAAGGTCAGCCCCTACAAATGT 5'& ||| ||||||| &5' ----CAGGATTCACTGTTTAC- 3' Sh3yl1 mmu-miR-30e beg:50 end:70 pic:3' GAAGGTCAGTTCCTACAAATGT 5'& ||| ||||||| &5' ----CAGGATTCACTGTTTAC- 3' Sh3yl1 mmu-miR-34a beg:46 end:67 pic:3' TGTTGGTCGATTCT--GTGACGGT 5'& ||| |.|| |||||.. &5' -----CAGACAGGATTCACTGTT- 3' Sh3yl1 mmu-miR-384-5p beg:51 end:70 pic:3' TGTAACGGATCCTTA---ACAAATGT 5'& |||| ||||||| &5' ---------AGGATTCACTGTTTAC- 3' Sh3yl1 mmu-miR-450b-5p beg:54 end:76 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||| ||||||||| &5' -ATTCACTGTT-TACTGCAAA- 3' Sh3yl1 mmu-miR-452 beg:87 end:103 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& || |||||||||. &5' --------TTGCTCTGCAAAT- 3' Sh3yl1 mmu-miR-669e beg:44 end:59 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& |||| |||.||. &5' ---------CACAGACAGGAT- 3' Sh3yl1 mmu-miR-682 beg:46 end:74 pic:3' GTCTG----AAGTGACAC-TGACGTC 5'& ||||| |||||||| |||||| &5' CAGACAGGATTCACTGTTTACTGCA- 3' Sh3yl1 mmu-miR-744 beg:79 end:100 pic:3' ACGACAATCGGGATCGGGGCGT 5'& || |||| ||.|.||| &5' -GCACA---CCCTTGCTCTGCA 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sh3yl1 RAID00045332 mmu-miR-203-3p miRNA MIMAT0000236 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00155621 mmu-miR-450b-5p miRNA MIMAT0003511 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00411887 mmu-miR-875-5p miRNA MIMAT0004937 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00412192 mmu-miR-322-5p miRNA MIMAT0000548 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00433608 mmu-miR-7681-5p miRNA MIMAT0029882 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00512829 mmu-miR-592-5p miRNA MIMAT0003730 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00540903 mmu-miR-26a-5p miRNA MIMAT0000533 Sh3yl1 mRNA 24057 Prediction 0.2202 Sh3yl1 RAID00626818 mmu-miR-21a-5p miRNA MIMAT0000530 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00657822 mmu-miR-338-3p miRNA MIMAT0000582 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00709538 mmu-miR-18b-5p miRNA MIMAT0004858 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00832559 mmu-miR-874-3p miRNA MIMAT0004853 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID00971397 mmu-miR-30d-5p miRNA MIMAT0000515 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01186959 mmu-miR-495-3p miRNA MIMAT0003456 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01227318 mmu-miR-1192 miRNA MIMAT0005850 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01304848 mmu-miR-615-3p miRNA MIMAT0003783 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01322112 mmu-miR-30e-5p miRNA MIMAT0000248 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01506605 mmu-miR-410-3p miRNA MIMAT0001091 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01632532 mmu-miR-539-5p miRNA MIMAT0003169 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01681418 mmu-miR-488-3p miRNA MIMAT0003450 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01694099 mmu-miR-155-5p miRNA MIMAT0000165 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID01855974 mmu-miR-3058-3p miRNA MIMAT0014814 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02054682 mmu-miR-218-5p miRNA MIMAT0000663 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02073198 mmu-miR-761 miRNA MIMAT0003893 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02131138 mmu-miR-7237-3p miRNA MIMAT0028443 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02208352 mmu-miR-376b-3p miRNA MIMAT0001092 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02245314 mmu-miR-451a miRNA MIMAT0001632 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02267617 mmu-miR-194-5p miRNA MIMAT0000224 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02277506 mmu-miR-340-5p miRNA MIMAT0004651 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02334746 mmu-miR-490-3p miRNA MIMAT0003780 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02469994 mmu-miR-186-5p miRNA MIMAT0000215 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02470852 mmu-miR-26b-5p miRNA MIMAT0000534 Sh3yl1 mRNA 24057 Prediction 0.2202 Sh3yl1 RAID02577856 mmu-miR-384-5p miRNA MIMAT0004745 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02608857 mmu-miR-376c-3p miRNA MIMAT0003183 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02629564 mmu-miR-6516-5p miRNA MIMAT0027343 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02743665 mmu-miR-708-5p miRNA MIMAT0004828 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02806086 mmu-miR-433-3p miRNA MIMAT0001420 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02818724 mmu-miR-214-3p miRNA MIMAT0000661 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02838310 mmu-miR-182-5p miRNA MIMAT0000211 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02844194 mmu-miR-145a-5p miRNA MIMAT0000157 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID02990061 mmu-miR-421-3p miRNA MIMAT0004869 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03096774 mmu-miR-30c-5p miRNA MIMAT0000514 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03150869 mmu-miR-7119-3p miRNA MIMAT0028136 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03200447 mmu-miR-669n miRNA MIMAT0009427 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03415674 mmu-miR-30b-5p miRNA MIMAT0000130 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03429351 mmu-miR-590-5p miRNA MIMAT0004895 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03489295 mmu-miR-96-5p miRNA MIMAT0000541 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03725503 mmu-miR-30a-5p miRNA MIMAT0000128 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03732510 mmu-miR-18a-5p miRNA MIMAT0000528 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03778249 mmu-miR-129-5p miRNA MIMAT0000209 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03793259 mmu-miR-448-3p miRNA MIMAT0001533 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03818203 mmu-miR-154-5p miRNA MIMAT0000164 Sh3yl1 mRNA 24057 Prediction 0.1828 Sh3yl1 RAID03841074 mmu-miR-378a-3p miRNA MIMAT0003151 Sh3yl1 mRNA 24057 Prediction 0.1828