SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3678304 | snp | G/T | 0.5 | 0 | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82903690 | GGTTTGAATATGCTT[G/T]GCCCAGGGAGTGGCA | 217011 |
rs3694664 | snp | C/T | 0.473373 | 0.11227 | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82904023 | GAGAGGCCCAAGTGA[C/T]TGGAGTTTCTGTGGT | 217011 |
rs3695110 | snp | A/C | 0.5 | 0 | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82904053 | TCGGATGAGAAGAGT[A/C]CAGAGCTGGGACTTC | 217011 |
rs3695151 | snp | A/T | 0.46281 | 0.131194 | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82904064 | GAGTCCAGAGCTGGG[A/T]CTTCATGTTGGTGGC | 217011 |
rs3695207 | snp | A/G | 0.459184 | 0.136902 | synonymous-codon, utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82904096 | CATACTCACCCGCAC[A/G]AGGTTGTAGCGGCTC | 217011 |
rs6186139 | snp | C/G | 0.48 | 0.0979796 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82910087 | TCCAAGGTCACATAG[C/G]TGTGAATCCATATTC | 217011 |
rs6277899 | snp | C/T | 0.497041 | 0.0383476 | upstream-variant-2KB | Nle1 | GRCm38.p3 | 11:82909004 | ATTCTGTCTGGAACT[C/T]TTGTGGACAGATTTG | 217011 |
rs6278289 | snp | C/T | 0.5 | 0 | upstream-variant-2KB | Nle1 | GRCm38.p3 | 11:82909041 | TGCTCTCCTCTTGTA[C/T]AAGTTCAAAGAATAT | 217011 |
rs6278809 | snp | A/G | 0.48 | 0.0979796 | upstream-variant-2KB | Nle1 | Mm_Celera | 11:82909175 | CCTGGTCTACAGAGT[A/G]AGTTCCAGGACATTG | 217011 |
rs6281937 | snp | G/T | 0.493827 | 0.0552116 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82909727 | TCCCTTGATCCAAAC[G/T]CCACAGAACCAAAGC | 217011 |
rs13468707 | snp | A/G | 0.497778 | 0.0332592 | missense, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82905375 | GCTTCTGTCCTTCAG[A/G]TTCTGCTGTGGGACC | 217011 |
rs28209033 | snp | C/T | 0.152778 | 0.230321 | upstream-variant-2KB | Nle1, Unc45b | Mm_Celera | 11:82909605 | GTTTTCCAAGTTTTC[C/T]GGCATTTTCAGTCAT | 217011 |
rs28209034 | snp | C/T | 0.489796 | 0.070696 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82909587 | CTGTCTTTCTTGTCC[C/T]GTGTTTTCCAAGTTT | 217011 |
rs28209035 | snp | A/C | 0.21875 | 0.248039 | upstream-variant-2KB | Nle1, Unc45b | Mm_Celera | 11:82909406 | TTCCTACATGCATAC[A/C]TTCATTCATCCGACA | 217011 |
rs28209036 | snp | A/G | 0.5 | 0 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82909339 | CCATTTGCTAGGGAC[A/G]CTGCCTTCTGGCCTT | 217011 |
rs28209037 | snp | A/G | 0.497778 | 0.0332592 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82909315 | TTTCCTCATCTGAGA[A/G]CAACGACTCCATTTG | 217011 |
rs28209038 | snp | C/T | 0.495868 | 0.0452663 | upstream-variant-2KB | Nle1 | GRCm38.p3 | 11:82908489 | GGAGGCCGGGATTGC[C/T]AATGGTGGCCTCCCT | 217011 |
rs28209039 | snp | A/G | 0.46281 | 0.131194 | upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82908431 | CGCCGGGCAACCTCC[A/G]GCTACAGCGCCCTCT | 217011 |
rs28209040 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82908406 | AAGACGGAGCGTTAA[A/G]TCCATGTCGCGCCGG | 217011 |
rs28209041 | snp | A/G | 0.5 | 0 | utr-variant-5-prime, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82908375 | GCGTCCCCACGTGGA[A/G]GAGAACCGAGGCGGA | 217011 |
rs28209042 | snp | G/T | 0.495868 | 0.0452663 | synonymous-codon, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82908146 | CGGCGTGATGTCCAC[G/T]GGCACGTCGAACGGG | 217011 |
rs28209043 | snp | A/C | 0.165289 | 0.235211 | intron-variant | Nle1 | Mm_Celera | 11:82906628 | ATTCCCTGAGGAGAA[A/C]TAGGACACTAATGCC | 217011 |
rs28209044 | snp | A/G | 0.492188 | 0.0620098 | intron-variant | Nle1 | GRCm38.p3 | 11:82906270 | CACACTCAGTCCAGT[A/G]TCTGCTTCGTTCTAA | 217011 |
rs28209045 | snp | C/T | 0.489796 | 0.070696 | intron-variant | Nle1 | GRCm38.p3 | 11:82905799 | TCACTTGACAGAAGG[C/T]ACATCAGCTCTCGGA | 217011 |
rs28209046 | snp | A/G | 0.426035 | 0.177515 | intron-variant | Nle1 | GRCm38.p3 | 11:82905705 | AGGAACCGAATCAAC[A/G]GAGAGGTGAGGGAGA | 217011 |
rs28209047 | snp | A/G | 0.473373 | 0.11227 | intron-variant | Nle1 | GRCm38.p3 | 11:82905634 | TTTCACCTTTATCTC[A/G]AGCCTGTGCCCAGCA | 217011 |
rs28209048 | snp | C/G | 0.497778 | 0.0332592 | intron-variant | Nle1 | GRCm38.p3 | 11:82905402 | AAGCTCATAAAGTAA[C/G]GTTCTGCGACCTGTC | 217011 |
rs28209050 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Nle1 | GRCm38.p3 | 11:82905195 | AAGCCGTTGCTGTCA[C/T]GGGGATGTTTCCTTT | 217011 |
rs28209051 | snp | A/C | 0.5 | 0 | intron-variant | Nle1 | GRCm38.p3 | 11:82905194 | CAAGCCGTTGCTGTC[A/C]TGGGGATGTTTCCTT | 217011 |
rs28209052 | snp | A/T | 0.459184 | 0.136902 | intron-variant | Nle1 | GRCm38.p3 | 11:82904778 | CAGCAGACTGGCTTC[A/T]GAATGCCCCTTACGT | 217011 |
rs28209053 | snp | A/G | 0.486111 | 0.0821678 | intron-variant | Nle1 | GRCm38.p3 | 11:82904739 | AACAAGTTTGCAAGC[A/G]GCAAGGCACTGGCAC | 217011 |
rs28209054 | snp | C/G | 0.473373 | 0.11227 | intron-variant | Nle1 | GRCm38.p3 | 11:82904676 | CTGCTTCCGCAGAAG[C/G]ACCAGCTGGACTCTT | 217011 |
rs28209055 | snp | G/T | 0.473373 | 0.11227 | intron-variant | Nle1 | GRCm38.p3 | 11:82904612 | GAGTTGGCAAACAAC[G/T]AAATAGGCTCTAAAA | 217011 |
rs28209056 | snp | C/T | 0.495868 | 0.0452663 | intron-variant, utr-variant-3-prime | Nle1 | GRCm38.p3 | 11:82904531 | TCTCATCAAACTGCA[C/T]CTGGAAGCTTGGGCC | 217011 |
rs28209057 | snp | A/G | 0.396694 | 0.202437 | intron-variant, utr-variant-3-prime | Nle1 | GRCm38.p3 | 11:82904473 | GACAGGTGACATAAG[A/G]CAAGAATCAGGAACC | 217011 |
rs28209058 | snp | A/G | 0.396694 | 0.202437 | intron-variant, utr-variant-3-prime | Nle1 | GRCm38.p3 | 11:82904461 | ACTCCACCATTGGAC[A/G]GGTGACATAAGGCAA | 217011 |
rs28209059 | snp | C/G | 0.5 | 0 | missense, utr-variant-3-prime, nc-transcript-variant | Nle1 | Mm_Celera | 11:82904331 | GCTAAGTGCCATAGT[C/G]TTCACCCAGTGGCCA | 217011 |
rs28209060 | snp | C/T | 0.396694 | 0.202437 | synonymous-codon, utr-variant-3-prime, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82904322 | ATAGTCTGTGCTAAG[C/T]GCCATAGTGTTCACC | 217011 |
rs28209061 | snp | C/T | 0.46281 | 0.131194 | intron-variant | Nle1 | GRCm38.p3 | 11:82903560 | GAACCTTAGACCATG[C/T]AAATGTGCTCCTTAG | 217011 |
rs28209062 | snp | A/G | 0.46281 | 0.131194 | intron-variant | Nle1 | GRCm38.p3 | 11:82903286 | AAATGAGGCCTGGCA[A/G]GGACACAAGCTTACA | 217011 |
rs28209063 | snp | C/T | 0.42 | 0.183303 | intron-variant | Nle1 | GRCm38.p3 | 11:82903225 | GCACACCGCGTGGGA[C/T]GTGGTCAGATACTGG | 217011 |
rs28209064 | snp | A/G | 0.396694 | 0.202437 | intron-variant | Nle1 | GRCm38.p3 | 11:82902946 | AGCAAGCAGTGTCGA[A/G]TCCATGCCAAACCCC | 217011 |
rs28209065 | snp | C/T | 0.46281 | 0.131194 | intron-variant | Nle1 | GRCm38.p3 | 11:82902813 | CTGTTCACCTCTACG[C/T]CCCTGGCCCTGTCAC | 217011 |
rs28209066 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Nle1 | GRCm38.p3 | 11:82902170 | GTGGTGTGGAGTTAA[C/T]GGTGGGCCAGCCCCA | 217011 |
rs28209067 | snp | C/G | 0.48 | 0.0979796 | intron-variant | Nle1 | GRCm38.p3 | 11:82902064 | TGCTAAGCCTCCAGA[C/G]CGGCATGACACCGCA | 217011 |
rs28209068 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Nle1 | GRCm38.p3 | 11:82901933 | ATCCACAACAGTGGC[A/G]CTCACCTTGGCTACC | 217011 |
rs28209069 | snp | C/T | 0.46875 | 0.121031 | synonymous-codon, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82901838 | AATCTGGTACACGGC[C/T]GCCACGTGGCCACGC | 217011 |
rs28209070 | snp | C/T | 0.165289 | 0.235211 | intron-variant | Nle1 | Mm_Celera | 11:82901243 | TTGCCGTCACAAGCA[C/T]GGTGCTTTAGGTGTG | 217011 |
rs28209071 | snp | C/T | 0.152778 | 0.230321 | utr-variant-3-prime, intron-variant | Fndc8, Nle1 | Mm_Celera | 11:82900487 | CAGACGACTGGAGGC[C/T]GTGAACAGACAATGC | 217011 |
rs28209072 | snp | C/T | 0.456747 | 0.140554 | utr-variant-3-prime, intron-variant | Fndc8, Nle1 | GRCm38.p3 | 11:82900392 | CTCAGCTTAGTGACG[C/T]GCAAAATGTACAACC | 217011 |
rs29395234 | snp | A/G | 0.5 | 0 | intron-variant | Nle1 | GRCm38.p3 | 11:82905657 | GCCCAGCAGGGTATG[A/G]GGCACTACAAACCCT | 217011 |
rs29407135 | snp | G/T | 0.5 | 0 | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82901429 | ATCTCTACCTCCCAT[G/T]GAGAATCTGGCTCTT | 217011 |
rs29411088 | snp | A/G | 0.5 | 0 | intron-variant | Nle1 | GRCm38.p3 | 11:82904597 | TGGATTTGAGTGTGG[A/G]AGTTGGCAAACAACG | 217011 |
rs29414025 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB | Unc45b, Nle1 | GRCm38.p3 | 11:82910438 | GGCCTTTTAAAGTTG[A/G]CTGAGGAGAAATAAG | 217011 |
rs29420143 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Nle1 | GRCm38.p3 | 11:82906751 | GTTTTTAATGCTTTT[A/T]AATCTTTATTCTACA | 217011 |
rs29423161 | snp | A/G | 0.5 | 0 | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82901365 | CCTTAACAATGAACT[A/G]CTGCATTGTGGAGAC | 217011 |
rs29423644 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Nle1 | GRCm38.p3 | 11:82906156 | CGCCAGCCTCTGCCT[C/T]CCAAGTGCTAGGATT | 217011 |
rs29429431 | snp | C/G | 0.375 | 0.216506 | intron-variant | Nle1 | GRCm38.p3 | 11:82905233 | ACTGAGCAGGGGAGG[C/G]GCAGCGTTAATCCCA | 217011 |
rs29435903 | snp | A/G | 0.48 | 0.0979796 | synonymous-codon, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82907744 | CTCAGCATCGTGGAC[A/G]TAGAACGCCAGGGGC | 217011 |
rs29436903 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Nle1 | GRCm38.p3 | 11:82906164 | TCTGCCTCCCAAGTG[C/T]TAGGATTAAAGGCGT | 217011 |
rs29442381 | snp | C/T | 0.5 | 0 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82910356 | GTGATAGAAGTTCCC[C/T]AAGAGCAATCTTGAC | 217011 |
rs29444017 | snp | G/T | 0.48 | 0.0979796 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82909578 | TCGGGGACCCTGTCT[G/T]TCTTGTCCCGTGTTT | 217011 |
rs29465874 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Nle1 | GRCm38.p3 | 11:82906939 | TCTCCAGCCCACCCC[C/G]CACCTTTTTTTTTTT | 217011 |
rs29470448 | snp | C/T | 0.5 | 0 | upstream-variant-2KB | Nle1, Unc45b | GRCm38.p3 | 11:82910351 | GGATGGTGATAGAAG[C/T]TCCCTAAGAGCAATC | 217011 |
rs29474275 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Nle1 | GRCm38.p3 | 11:82902266 | CTGGCTTTCTAAAGA[A/C]AATCTGAATTACCAC | 217011 |
rs29476130 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Nle1 | GRCm38.p3 | 11:82906947 | CCACCCCCCACCTTT[C/T]TTTTTTTTTTTTTTT | 217011 |
rs29480419 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB | Nle1, Unc45b | Mm_Celera | 11:82910067 | GAACAGGGCAGTGGG[A/G]CCTGTCCAAGGTCAC | 217011 |
rs29482604 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Nle1 | GRCm38.p3 | 11:82905945 | GGCCCTGCCCTAGAT[C/T]TGCTGAAACAAAAGC | 217011 |
rs45998596 | snp | A/G | | | intron-variant, downstream-variant-500B | Nle1 | Mm_Celera | 11:82904190 | GTTACACATCCACCC[A/G]CTAGGCTCCTTCCCG | 217011 |
rs46336007 | snp | C/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82902881 | TGAGGTGAGGGGTCT[C/G]TGTGTCAGAAGTGTG | 217011 |
rs46421250 | snp | A/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903414 | GTGGCTTTCCTAGGC[A/G]AGCTGTACCTTATGT | 217011 |
rs46847144 | snp | A/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903219 | AAGAAAGCACACCGC[A/G]TGGGACGTGGTCAGA | 217011 |
rs46850657 | snp | C/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903520 | ACTCTGTGAAAGATC[C/G]ATAATATCTTTCATA | 217011 |
rs47122195 | snp | A/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903482 | TTGGTAAAGCTGGAT[A/G]CTTCCCAAGGGAACA | 217011 |
rs47313936 | snp | A/C | | | intron-variant | Nle1 | GRCm38.p3 | 11:82906882 | GGAATTGAACTCAGG[A/C]CCTCTAGGAGAGCAA | 217011 |
rs47518849 | snp | A/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903312 | TTACATGCAACTCCA[A/G]GCTAGCCAGTAAGGA | 217011 |
rs47772670 | snp | C/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903384 | AACCAAGGTACAGAA[C/T]GGTGCTAGAAGGGGG | 217011 |
rs48566329 | snp | A/G | | | synonymous-codon, utr-variant-3-prime, nc-transcript-variant | Nle1 | GRCm38.p3 | 11:82904328 | TGTGCTAAGTGCCAT[A/G]GTGTTCACCCAGTGG | 217011 |
rs49009462 | snp | A/G | | | intron-variant, utr-variant-3-prime | Nle1 | GRCm38.p3 | 11:82904426 | CATACCTAGCATCAA[A/G]GGGAGAGATTATACC | 217011 |
rs49686833 | snp | C/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82902924 | AGACCCAGCCAGTGC[C/T]ACACAGAGCAAGCAG | 217011 |
rs49785210 | snp | C/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82906857 | AGTTGTGAGCTCTTA[C/T]GGGGTGCTGGGAATT | 217011 |
rs49927192 | snp | A/G | | | upstream-variant-2KB | Nle1 | GRCm38.p3 | 11:82908564 | CCAAAACTCAGAGAA[A/G]TTAATTGATTTGCCC | 217011 |
rs50404031 | snp | C/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82907034 | AAGGCTGGCTTAGAA[C/T]TCACAAAGACCTGCC | 217011 |
rs50561598 | snp | A/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82902670 | AAAGGCGTGAGCCAC[A/G]ACTGCCCAGCCCAGA | 217011 |
rs50615989 | snp | C/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82903310 | GCTTACATGCAACTC[C/T]AGGCTAGCCAGTAAG | 217011 |
rs52106209 | snp | C/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82908274 | GTCAGTCCCCCTCCC[C/T]TCCCCTCGGGCCTCG | 217011 |
rs52291124 | snp | A/G | | | intron-variant | Nle1 | GRCm38.p3 | 11:82902553 | TTTTTTTCGGGGCAG[A/G]GTTTCTCTGTGTAGC | 217011 |
rs107750118 | snp | G/T | | | intron-variant | Nle1 | GRCm38.p3 | 11:82908291 | CCCCTCGGGCCTCGG[G/T]ACCCCACGCGGAGAC | 217011 |
rs212013833 | snp | A/C | | | intron-variant, utr-variant-3-prime | Nle1 | Mm_Celera | 11:82904416 | TATACACATACATAC[A/C]TAGCATCAAGGGGAG | 217011 |
rs212223729 | snp | G/T | | | synonymous-codon, downstream-variant-500B | Nle1 | Mm_Celera | 11:82901580 | GCACTTGTCTTTCCC[G/T]CCGCTTGCTACTCTC | 217011 |
rs212946310 | in-del | -/TTAAAAA | | | intron-variant | Nle1 | Mm_Celera | 11:82906963 | TTTTTTTTTTTTTTT[-/TTAAAAA]AAAAGACAGGGTTTC | 217011 |
rs213511366 | snp | C/T | | | upstream-variant-2KB | Nle1, Unc45b | Mm_Celera | 11:82909600 | CCTGTGTTTTCCAAG[C/T]TTTCCGGCATTTTCA | 217011 |
rs213541467 | snp | C/T | | | upstream-variant-2KB | Nle1 | Mm_Celera | 11:82909106 | AGAACATGCCTTTAA[C/T]CCAGGCTCTTGCGAG | 217011 |
rs213554743 | snp | C/T | | | intron-variant | Nle1 | Mm_Celera | 11:82905184 | CATAGTAGGCCAAGC[C/T]GTTGCTGTCATGGGG | 217011 |
rs213576829 | snp | G/T | | | intron-variant | Nle1 | Mm_Celera | 11:82902284 | TCTGAATTACCACTT[G/T]AAAGAACTGCTGTGT | 217011 |
rs213689278 | snp | A/G | | | intron-variant | Nle1 | Mm_Celera | 11:82906759 | TGCTTTTAAATCTTT[A/G]TTCTACATGAACAGG | 217011 |
rs214018901 | snp | C/T | | | intron-variant | Nle1 | Mm_Celera | 11:82907159 | CTTGCTGTTCTGGAA[C/T]TATTTAGATCAGTCT | 217011 |
rs214054269 | snp | C/T | | | intron-variant, utr-variant-3-prime | Nle1 | Mm_Celera | 11:82904447 | AGATTATACCCTATA[C/T]TCCACCATTGGACAG | 217011 |
rs214400231 | snp | C/T | | | missense, nc-transcript-variant | Nle1 | Mm_Celera | 11:82904917 | GTTCACAGCGGCCTG[C/T]GGTTGTATCCCAGAC | 217011 |
rs215016516 | snp | C/T | | | intron-variant, downstream-variant-500B | Nle1 | GRCm38.p3 | 11:82904024 | AGAGGCCCAAGTGAC[C/T]GGAGTTTCTGTGGTC | 217011 |