DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Prpf8; Prp8 | mmu-let-7a | 1 | 20 | UGAUAUGUUGGAUGAUGGAGU- | ||| ||| ||:|:||| | ---UUACUUCCUUCUGCUUCAG |
Prpf8; Prp8 | mmu-let-7e | 1 | 20 | UGAUAUGUUGGAGGAUGGAGU- | ||| |||:||:|:||| | ---UUACUUCCUUCUGCUUCAG |
Prpf8; Prp8 | mmu-miR-101b | 71 | 108 | GAAGUCGAUAGU-------------GUCAUGA-CAU- | |||||| :||| | ||:|| ||: | AUUCAGCAGUCAGCCCCUUUGCGUUCUGUGCUUGUGU |
Prpf8; Prp8 | mmu-miR-103 | 46 | 69 | AGUAUCGGGACA----UGUUACGACGA- | ||||| |||| |||||| | ----CGCCCUCCCCAGACAA-GCUGCUG |
Prpf8; Prp8 | mmu-miR-107 | 41 | 69 | -ACUAUCGGGACA----UGUUACGACGA- | ||| ||||| |||| |||||| | UUGAACGCCCUCCCCAGACAA-GCUGCUG |
Prpf8; Prp8 | mmu-miR-134 | 83 | 110 | -GGGGAGAC-CAGU---UGGU--CAGUGU | |||||:|| ||: :|: ||: | GCCCCUUUGCGUUCUGUGCUUGUGUUG-- |
Prpf8; Prp8 | mmu-miR-149 | 26 | 46 | CCUCACUUCUGUGCCUCGGU---CU- | ||| | :|||||| || | -----AAAG-CCUGGAGCCUCUUGAA |
Prpf8; Prp8 | mmu-miR-206 | 65 | 99 | GGUGUGUGAA------------GGAAUGUAAGGU | | |||:| |:||:|:|||: | GCUGACAUUCAGCAGUCAGCCCCUUUGCGUUCUG |
Prpf8; Prp8 | mmu-miR-326 | 30 | 60 | UGACCUC------CUUCCC----GGGUCUCC | |||||| ||| | |||||| | CCUGGAGCCUCUUGAACGCCCUCCCCAGAC- |
Prpf8; Prp8 | mmu-miR-330 | 86 | 109 | AGAGACGUCCGGGACACGAA-ACG- | ||:||| |::|||||||| ||: | CCUUUGC--GUUCUGUGCUUGUGUU |
Prpf8; Prp8 | mmu-miR-345 | 61 | 86 | CGUGAC--CUGA---UCCCCAGUCGU | :||| ||| || |||||| | -AGCUGCUGACAUUCAGCAGUCAGCC |
Prpf8; Prp8 | mmu-miR-370 | 27 | 65 | -UUGGUCCAAGGU------------GGGGUC-GUCCG- | |:|| || || |||||| || || | AAGCCUGGAGCCUCUUGAACGCCCUCCCCAGACAAGCU |
Prpf8; Prp8 | mmu-miR-380-5p | 61 | 87 | -CG-CGUAC---AAGAUACCAGUUGGU | || || || ||| ||||:|| | AGCUGC-UGACAUUCAGCAGUCAGCCC |
Prpf8; Prp8 | mmu-miR-424 | 52 | 70 | AGGUUUUGUACUUAACGACGAC- | || |:||| ||||||| | CCCCAGACAA-----GCUGCUGA |
Prpf8; Prp8 | mmu-miR-468 | 54 | 84 | -GUCUGUGUG-CGUGUA------GUCAGUAU | |||||| :| || | |||||| | CCAGACAAGCUGCUGACAUUCAGCAGUCAG- |
Prpf8; Prp8 | mmu-miR-485-5p | 14 | 43 | CUUAAGUA-----GUGCCGG---UCGGAGA- | |||| || ||| ||||||| | --CUUCAGAUCCCCAAAGCCUGGAGCCUCUU |
Prpf8; Prp8 | mmu-miR-491 | 36 | 58 | -GGAGUACCUUCCCA-AGGGGUGA | |||| ||| | |||||| | GCCUCUU-GAACGCCCUCCCCAG- |
Prpf8; Prp8 | mmu-miR-497 | 46 | 70 | AUGUUUGGUGUCACA-CGACGAC- | :| || ||| ||||||| | CGCCCUCCCCAGACAAGCUGCUGA |
Prpf8; Prp8 | mmu-miR-505 | 53 | 72 | UCUUUUGGUC-GUUC-ACAACUGC | |||| |||| || |||| | -----CCCAGACAAGCUGCUGACA |
Prpf8; Prp8 | mmu-miR-541 | 63 | 91 | -AC-ACUG---GUUGU-AGUCUUAGGGAA- | || |||| ||:|| |||| ||||| | CUGCUGACAUUCAGCAGUCAGC--CCCUUU |
Prpf8; Prp8 | mmu-miR-665 | 28 | 45 | AUUCCCUGGAGU-CGGAGGACCA | :||| : |||||:|| | -----AGCCUGGAGCCUCUUGA- |
Prpf8; Prp8 | mmu-miR-673 | 49 | 71 | -GAGGUUCCUGGUCUCGAC-ACUC | |||| ||| ||||| ||| | CCUCCCCAGACA--AGCUGCUGAC |
Prpf8; Prp8 | mmu-miR-679 | 52 | 83 | UGGUUCUCA--GUGGAG-------UGUCAGG | || ||| | || :||||| | CCCCAGACAAGCUGCUGACAUUCAGCAGUCA |
Prpf8; Prp8 | mmu-miR-683 | 56 | 81 | CUCCUGUGU--CGAAU----GUCGUCC | |||| ||| |||||| | --AGACAAGCUGCUGACAUUCAGCAGU |
Prpf8; Prp8 | mmu-miR-688 | 74 | 95 | CUUAUUCAUCAG-CGG----ACGCU | || |||| ||| |||| | ----CAGCAGUCAGCCCCUUUGCGU |
Prpf8; Prp8 | mmu-miR-693-3p | 27 | 68 | AAUGUCGGUGU----AG-ACU---------------UUCGACG | |||| : || ||| ||||||| | ---AAGCCUGGAGCCUCUUGAACGCCCUCCCCAGACAAGCUGCU |
Prpf8; Prp8 | mmu-miR-705 | 28 | 57 | ACGGG---UGGGGU-------GGAGGGUGG | |||: :||:| |||||| | | AGCCUGGAGCCUCUUGAACGCCCUCCC-CA |
Prpf8; Prp8 | mmu-miR-709 | 5 | 27 | -AGGAGGACGGAGAC--GGAGG- | ||||:||||:|| || || | UUCCUUCUGCUUCAGAUCC-CCA |
Prpf8; Prp8 | mmu-miR-711 | 11 | 34 | GAAUGUAGAG-AGGGGCCCAGGG- | |:| || ||||| ||: | -CUGCUUCAGAUCCCCAAAGCCUG |
Prpf8; Prp8 | mmu-miR-744 | 64 | 95 | -CGACAA----UCGGGA-UCGGGG---CGU- | |||| ||| |||||| ||: | UGCUGACAUUCAGCAGUCAGCCCCUUUGCGU |
Prpf8; Prp8 | mmu-miR-759 | 78 | 101 | -CAGUUUUAACAAACGUGAGACG- | ||||: |||||::||||: | AGUCAGCCCC-UUUGCGUUCUGUG |
Prpf8; Prp8 | mmu-miR-762 | 61 | 89 | -CGA-GACA--GGGCCGG-GGUCGGGG- | ||| ||| ::| || :||||||| | AGCUGCUGACAUUCAGCAGUCAGCCCCU |
Prpf8; Prp8 | mmu-miR-801 | 56 | 83 | CAGCUAA--GGCGUGC-GU--GUCGUUAG- | || |:|| :| || |||||:|| | --AGACAAGCUGC-UGACAUUCAGCAGUCA |
Prpf8; Prp8 | mmu-miR-103 | 42 | 67 | aguauCGGGACAUGU---UACGACGA | ||||| || | |||||| | tgaacGCCCTCCCCAGACAAGCTGCT |
Prpf8; Prp8 | mmu-miR-107 | 42 | 67 | ACUAUCGGGACAUGU---UACGACGA | ||| ||||| || | |||||| | TGAACGCCCTCCCCAGACAAGCTGCT |
Prpf8; Prp8 | mmu-miR-134 | 52 | 84 | GGGG------AGAC--CAGU---UGGUCAGUgu | |||| ||| | || | |||||| | CCCCAGACAAGCTGCTGACATTCAGCAGTCAgc |
Prpf8; Prp8 | mmu-miR-149 | 21 | 41 | ccucacUUCUGUGCCUCGGucu | ||| | :|||||| | tccccaAAG-CCTGGAGCCtct |
Prpf8; Prp8 | mmu-miR-206 | 54 | 76 | GGUGUGU--GAAGGAAUGUAAGgu | ||| ||| | | || |||||| | CCAGACAAGC-TGCTGACATTCag |
Prpf8; Prp8 | mmu-miR-326 | 30 | 60 | uGACCUC------CUUCC----CGGGUCUcc | |||||| ||| | |||||| | cCTGGAGCCTCTTGAACGCCCTCCCCAGAca |
Prpf8; Prp8 | mmu-miR-345 | 62 | 85 | CG-UGAC-CUGA-UCCCCAGUCGu | || :||| |:| || |||||| | GCTGCTGACATTCAGCAGTCAGCc |
Prpf8; Prp8 | mmu-miR-370 | 57 | 81 | uUGGUCCAAGG-UG-GGGUCGUCcg | || || | |: || ::|||||| | gACAAGCTGCTGACATTCAGCAGtc |
Prpf8; Prp8 | mmu-miR-380-5p | 62 | 86 | CG-CGUAC---AAGAUACCAGUUGGu | || || || ||| : ||||:|| | GCTGC-TGACATTCAGCAGTCAGCCc |
Prpf8; Prp8 | mmu-miR-468 | 55 | 84 | GUCUGUGUG-CG--UGUA----GUCAGUau | |||||| :| || |||| |||||| | CAGACAAGCTGCTGACATTCAGCAGTCAgc |
Prpf8; Prp8 | mmu-miR-485-5p | 20 | 41 | cuuaaguagugccggUCGGAGA | ||||||| | atccccaaagcctggAGCCTCT |
Prpf8; Prp8 | mmu-miR-491 | 37 | 58 | GGAGUACCUUCCCAAGGGGUga | |||| || | | |||||| | CCTCTTGAACGCCCTCCCCAga |
Prpf8; Prp8 | mmu-miR-497 | 47 | 68 | auguuuggugucacaCGACGAC | ||||||| | gccctccccagacaaGCTGCTG |
Prpf8; Prp8 | mmu-miR-505 | 48 | 71 | ucuuuuGGUC-GUUC-ACAACUGc | |||| |||| || |||| | ccctccCCAGACAAGCTGCTGACa |
Prpf8; Prp8 | mmu-miR-541 | 64 | 89 | AC-ACUGGUUGUAGUC--UUAGGGAA | || |||| || ||| |: ||||| | TGCTGACATTCAGCAGTCAGCCCCTT |
Prpf8; Prp8 | mmu-miR-665 | 26 | 45 | aUUCCCUGGA-GUCGGAGGACca | ||| ||| ||||||:|| | aAAG---CCTGGAGCCTCTTGaa |
Prpf8; Prp8 | mmu-miR-673 | 50 | 70 | GAGGUUCCUGGUCUCGAC-ACUc | |||| || || ||||| ||| | CTCCCCAGA-CA-AGCTGCTGAc |
Prpf8; Prp8 | mmu-miR-679 | 57 | 82 | ugGUUC--UCAGUG-GAGU-GUCAGg | |||| : | || :||| ||||| | gaCAAGCTGCTGACATTCAGCAGTCa |
Prpf8; Prp8 | mmu-miR-683 | 54 | 80 | cucCUGU--GUCGA----AUGUCGUCc | |||| | ||| | |||||| | ccaGACAAGCTGCTGACATTCAGCAGt |
Prpf8; Prp8 | mmu-miR-688 | 70 | 94 | cUUAUUCAUCAG-CGG----ACGCu | | | || |||| ||| |||| | cATTCAGCAGTCAGCCCCTTTGCGt |
Prpf8; Prp8 | mmu-miR-693-3p | 43 | 66 | aaUGUCGGUGUAGACU-UUCGACG | ||: || | | || ||||||| | gaACGCCCTCCCCAGACAAGCTGC |
Prpf8; Prp8 | mmu-miR-705 | 35 | 57 | aCGG-G---UGGGGUGGAGGGugg | ||| | | | | |||||| | aGCCTCTTGAACGC-CCTCCCcag |
Prpf8; Prp8 | mmu-miR-709 | 3 | 18 | aGGAGGACGGAGACGGAGg | |:|||| |||||:|| | aCTTCCT---TCTGCTTCa |
Prpf8; Prp8 | mmu-miR-711 | 1 | 24 | gAAUGUAG--AGA-GGGGCCCAGGG | |||| || ||| |::| | |||| | -TTACTTCCTTCTGCTTCAGATCCC |
Prpf8; Prp8 | mmu-miR-744 | 65 | 90 | CGAC---AA-UCGGGA-UCGGGGcgu | |||| || ||| | |||||| | GCTGACATTCAGCAGTCAGCCCCttt |
Prpf8; Prp8 | mmu-miR-762 | 62 | 87 | CGA-GACAG--GGCCG-GGGUCGGGG | ||| ||| | :| || :||||||| | GCTGCTGACATTCAGCAGTCAGCCCC |