Asb2
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000376mmu-miR-29865256Asb2ccCUUCUUGUCGGGA----GGAGACGg |::||:::| | | ||||||| guGGGGAGUGGACGUGGAACCUCUGCu222139165[mm9:12:104559583-104559609:-]0.54691487-27.76-0.5780
MIMAT0004617mmu-miR-148a*65256Asb2ucagccucacagagUCUUGAAa ||||||| uggccuuaagcuggAGAACUUg29277298[mm9:12:104559450-104559471:-]0.49291407-9.19-0.2135
MIMAT0004620mmu-let-7a*65256Asb2ccUUUCUGUCAUCU--AACAUAUc :|: ||| || | ||||||| cuGAGCACAAUAAACGUUGUAUAc221369392[mm9:12:104559356-104559379:-]0.48781557-7.41-0.2978
MIMAT0004621mmu-let-7b*65256Asb2ccCUUCCGUCA--UCCAACAUAUc ||: || | | |||||||| cuGAGCACAAUAAACGUUGUAUAc221369392[mm9:12:104559356-104559379:-]0.48781517-7.51-0.3029
MIMAT0005439mmu-let-7c-2*65256Asb2ccUUUCUGUCAUCU--AACAUAUc :|: ||| || | ||||||| cuGAGCACAAUAAACGUUGUAUAc221369392[mm9:12:104559356-104559379:-]0.48781557-7.41-0.2978
MIMAT0004623mmu-let-7f*65256Asb2ccCUUCCGUUAUCU--AACAUAUc ||: ||||| | ||||||| cuGAGCACAAUAAACGUUGUAUAc221369392[mm9:12:104559356-104559379:-]0.48781597-9.80-0.2978
MIMAT0000571mmu-miR-331-3p65256Asb2aagauccuAUCCGGGUCCCCg |:|| ||||||| cuucaaccUGGGGCCAGGGGa214220240[mm9:12:104559508-104559528:-]0.52251537-23.58-0.1151
MIMAT0000595mmu-miR-345-5p65256Asb2uuCGU--GACCU---GAUCCCCAGUCg ||| | ||| | |||||||| cuGCAUCCAGGACCCCCUGGGGUCAGa2215682[mm9:12:104559666-104559692:-]0.49811467-25.58-0.1122
MIMAT0003170mmu-miR-54165256Asb2ucacACUGGUUG--UAGUCUUAGGGAa ||: ||| :| :|||||||| aagcUGGAGAACUUGUAGGAAUCCCUc222284310[mm9:12:104559438-104559464:-]0.49291567-18.61-0.1416
MIMAT0004788mmu-miR-20b*65256Asb2gaucuucACG--AGUGUGAC-GUCa ||| |||||||| ||| gaaccucUGCUUUCACACUGUCAGc216155179[mm9:12:104559569-104559593:-]0.54691260-17.92-0.2868
MIMAT0004789mmu-miR-450a-3p65256Asb2uacuuACG-UUUCGUAG-GGGUUa ||| ::||| || ||||| uucuuUGCUGGAGCUUCACCCAAa218102125[mm9:12:104559623-104559646:-]0.52251240-16.20-0.6283
MIMAT0003892mmu-miR-76265256Asb2cgagacagggccgGGGUCGGGg |||||||| ugcgagggagacgCCCAGCCCa210333354[mm9:12:104559394-104559415:-]0.48781457-22.54-0.1457
MIMAT0003894mmu-miR-764-5p65256Asb2uccuccuguacACUCGUGg ||||||| uuuuauuucacUGAGCACa29359377[mm9:12:104559371-104559389:-]0.48781407-11.20-0.8312
MIMAT0004823mmu-miR-666-3p65256Asb2ucgucCGCUAGUGCGAC-GUCGg || |||| ||| |||| ccucuGCUUUCACACUGUCAGCg218158180[mm9:12:104559568-104559590:-]0.54691250-16.59-0.1923
MIMAT0003451mmu-miR-67765256Asb2agUCUUCGAUUAGUAGUGACUu || | :| ||: ||||||| caAGUAUUUUAUU-UCACUGAg221353373[mm9:12:104559375-104559395:-]0.48781547-12.41-0.7953
MIMAT0004888mmu-miR-49365256Asb2ggACCGUGUGUC-AUC-CUGGAAGu |||| ||:|| || ||||||| ucUGGC-CAUAGCCAGAGACCUUCa222201224[mm9:12:104559524-104559547:-]0.52251617-32.25-0.4047
MIMAT0004892mmu-miR-56865256Asb2cacacAUAUGUAA-AUAUGUa || ||:|| |||||| cacaaUAAACGUUGUAUACAg216374394[mm9:12:104559354-104559374:-]0.48781276-8.38-0.8673
MIMAT0004897mmu-miR-654-5p65256Asb2uguguACAAGACGUCGAA-UGGu | | ||| ||||| ||| gguucUUUGCUGGAGCUUCACCc218100122[mm9:12:104559626-104559648:-]0.49811250-15.13-0.2574
MIMAT0005847mmu-miR-119065256Asb2cugUCUCCCCUUGGAGUC-GACu ||| | |: |:|||| ||| aggAGAUGUGGCCUUCAGACUGu2201234[mm9:12:104559714-104559736:-]0.49171270-17.75-0.2457
MIMAT0005851mmu-miR-119365256Asb2cuaUCA-UUUUG-CC-CACUGGAu :|| |:||| || ||||||| uggGGUCAGAACAGGUGUGACCUu2197396[mm9:12:104559652-104559675:-]0.49811557-21.27-0.2152
MIMAT0009414mmu-miR-1937b65256Asb2acccCCGA-GCAGGCCCUa | || : ||||||| uucaGACUGUUUCCGGGAc2152543[mm9:12:104559705-104559723:-]0.49811417-14.30-0.1948
MIMAT0009429mmu-miR-1937c65256Asb2acccCCGA-GAAGGCCCUa | || :|||||||| uucaGACUGUUUCCGGGAc2152543[mm9:12:104559705-104559723:-]0.49811497-17.22-0.1948
MIMAT0015640mmu-miR-3470a65256Asb2ggUCGGACCAGAUGUUUCACu |||:| | ||||||| ggAGCUUCACC--CAAAGUGa220111129[mm9:12:104559619-104559637:-]0.52251447-14.28-0.2602
MIMAT0000144mmu-miR-13265256Asb2gcugGUACC-GACAUCUGACAAu ::||| || |||||||| gagaUGUGGCCUUCAGACUGUUu2191436[mm9:12:104559712-104559734:-]0.49171577-17.29-0.1933
MIMAT0000659mmu-miR-21265256Asb2acCGGCACU-GACCUCUGACAAu | :|||: || |||||||| gaGAUGUGGCCUUCAGACUGUUu2211436[mm9:12:104559712-104559734:-]0.49171597-19.26-0.1951
MIMAT0000666mmu-miR-32065256Asb2agcGGGAGAGUUGG--GUCGAAAa |:| || :||| ||||||| uccCUCACUGGACCCUCAGCUUUc220305328[mm9:12:104559420-104559443:-]0.48781587-22.04-0.1175
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G055540Asb2Mus musculus65256
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Asb2mmu-miR-26bstarbeg:69end:88pic:3' CTCGGTTCATTACCTCTTGTCC 5'& | .| |||||||| &5' ---CTGGGGTC---AGAACAGG 3'
Asb2mmu-miR-127starbeg:105end:120pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& ||. |||||||| &5' ------GCTG---GAGCTTCA- 3'
Asb2mmu-miR-762beg:343end:354pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& |||||||| &5' -------------CCCAGCCC- 3'
Asb2mcmv-miR-m01-3beg:105end:122pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& || | |||||||| &5' -----GCT---GGAGCTTCACC- 3'
Asb2mmu-miR-212beg:18end:36pic:3' ACCGGCACTGACC-TCTGACAAT 5'& |||.| |||||||| &5' -----GTGGCCTTCAGACTGTT- 3'
Asb2mmu-miR-1894-5pbeg:226end:244pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |.||| ||||||||| &5' -GGGGCC------AGGGGAGAG 3'
Asb2mcmv-miR-M23-1-3pbeg:254end:273pic:3' CCGGAGCCCGGCTGCGTCCTC 5'& ||. |||| | |||||| &5' GGT----GGCCCAGGCAGGA- 3'
Asb2mmu-miR-1188beg:155end:174pic:3' AGGAC-CGGGTTGGAGTGTGGT 5'& ||| ||. .||||||. &5' -CCTCTGCT----TTCACACT- 3'
Asb2mmu-miR-1193beg:7end:26pic:3' CTATCATTTTGCCCACTGGAT 5'& || .|. |||.||| &5' ---AGAGGAGAT-GTGGCCT- 3'
Asb2mmu-miR-1193beg:73end:96pic:3' CTATCA-TTTTG-CC-CACTGGAT 5'& .|| |.||| || ||||||| &5' ---GGTCAGAACAGGTGTGACCT- 3'
Asb2mmu-miR-1193beg:47end:59pic:3' CTATCATTTTGCCCACTGGAT 5'& ||||.|||. &5' ------------GGTGGCCTG 3'
Asb2mmu-miR-132beg:13end:36pic:3' GCTGGTACCGACA-TCTGACAAT 5'& || ..|||| |||||||| &5' -GA-TGTGGCCTTCAGACTGTT- 3'
Asb2mmu-miR-145beg:271end:292pic:3' TCCCTAAGGACCCT--TTTGACCTG 5'& |||||| ||.||||| &5' ------TCCTGGCCTTAAGCTGGA- 3'
Asb2mmu-miR-146bstarbeg:59end:79pic:3' TGGTCTTGACTCAGGGATCCCG 5'& ||||.|| ||||.|||. &5' -CCAGGACC----CCCTGGGGT 3'
Asb2mmu-miR-15astarbeg:8end:26pic:3' ACTCCGTCGTGTCATACCGGAC 5'& |||| || |.|||||| &5' -GAGG-AGA----TGTGGCCT- 3'
Asb2mmu-miR-15astarbeg:37end:59pic:3' ACTCCGTCGT-GTCATACCGGAC 5'& .|| || ||| .||||||| &5' --GGGACGCCCCAG-GTGGCCTG 3'
Asb2mmu-miR-188-3pbeg:123end:145pic:3' ACGTTTG-GGACGTACACCCTC 5'& | |. |||| |||||||. &5' -GTGAGAACCTG-ATGTGGGG- 3'
Asb2mmu-miR-1894-5pbeg:325end:344pic:3' TCTCCGTCC-ACCATCCCCTCTC 5'& |||| || |||||| &5' -----CAGGCTGCGA-GGGAGA- 3'
Asb2mmu-miR-190bbeg:346end:369pic:3' TTGGG-TTATAGTTTGTATAGT 5'& |.||| |.|||. .|| ||| &5' AGCCCAAGTATTT--TATTTCA 3'
Asb2mmu-miR-1928beg:3end:24pic:3' CTC-GACCG-----TTACATCGA 5'& | |||| .||||.|| &5' --GCCTGGAGAGGAGATGTGGC- 3'
Asb2mmu-miR-1935beg:148end:167pic:3' TCTCTAGGCGGTC-GGAGACGGA 5'& ||. . |||||||.| &5' -------CGTGGAACCTCTGCTT 3'
Asb2mmu-miR-1940beg:204end:225pic:3' TTGACGAGGTGGAAGAGTCA--GGAGGTA 5'& |||. | ||| |||.|| &5' -------CCATAG-C-CAGAGACCTTCA- 3'
Asb2mmu-miR-1982starbeg:52end:76pic:3' GGAG--GGGTCCTGGGAGGGTT 5'& ||| .||||||||| || . &5' CCTGCATCCAGGACCC-CCTGG 3'
Asb2mmu-miR-2135beg:201end:223pic:3' CAAAGCCGG----GGT-TCTGGAGA 5'& .|||| ||| ||||||. &5' ----TGGCCATAGCCAGAGACCTT- 3'
Asb2mmu-miR-2146beg:147end:171pic:3' GTGTACCTTGG-GAA-GAGGTG 5'& ||.||||||| || .|.||| &5' -ACGTGGAACCTCTGCTTTCAC 3'
Asb2mmu-miR-218beg:368end:379pic:3' TGTACCAATCTAGTTCGTGTT 5'& .||||||| &5' -------------GAGCACAA 3'
Asb2mmu-miR-222beg:1end:24pic:3' TGGGTCATCGG-TCTACATCGA 5'& .|| | || ||||||.|| &5' GCCTGG-AGAGGAGATGTGGC- 3'
Asb2mmu-miR-22starbeg:276end:297pic:3' ATTTCGAACGG----TGACTTCTTGA 5'& ||| .|||.|||||| &5' --------GCCTTAAGCTGGAGAACT 3'
Asb2mmu-miR-331-3pbeg:225end:240pic:3' AAGATCCTATCCGGGTCCCCG 5'& |.|| ||||||| &5' --------TGGGGCCAGGGG- 3'
Asb2mmu-miR-337-3pbeg:227end:247pic:3' TCCGTAGTATATC-CTCGACTT 5'& .||| || .| ||||||. &5' GGGC--CAGG-GGAGAGCTGG- 3'
Asb2mmu-miR-337-3pbeg:275end:292pic:3' TCCGTAGTATATCCTCGACTT 5'& ||| |.| |||||.| &5' -GGCCTTA------AGCTGGA 3'
Asb2mmu-miR-338-3pbeg:92end:114pic:3' GTTGTTTTAGTGACT-----ACGACCT 5'& | |||. ||||||| &5' --------TTGCTGGTTCTTTGCTGGA 3'
Asb2mmu-miR-343beg:327end:344pic:3' AGACCCGTGTACTTCCCTCT 5'& ||| .||||||| &5' ----GGCTGC--GAGGGAGA 3'
Asb2mmu-miR-345-5pbeg:62end:82pic:3' TTCGTGACCTGAT---CCCCAGTCG 5'& |||| |||||||| &5' -------GGACCCCCTGGGGTCAG- 3'
Asb2mmu-miR-3470abeg:239end:262pic:3' GGTCGGACCAGA--TGTTTCACT 5'& || ||||||| .|||.|||. &5' --AG-CTGGTCTGGGCAAGGTGG 3'
Asb2mmu-miR-3475beg:14end:31pic:3' AAGTTTGGTACA-CGGAGGTCT 5'& |||| ||||.|||| &5' --------ATGTGGCCTTCAGA 3'
Asb2mmu-miR-34abeg:155end:178pic:3' TGTTGGT--CGATTCTGTGACGGT 5'& |||| ||| ||||||.|| &5' --AACCTCTGCTTTCACACTGTCA 3'
Asb2mmu-miR-449bbeg:155end:177pic:3' CGGT--CGATTGTTGTGACGGA 5'& || ||| | ||||||.| &5' -CCTCTGCTTTC-ACACTGTC- 3'
Asb2mmu-miR-493beg:202end:225pic:3' GGACCGTGTGTCA-TC-CTGGAAGT 5'& |||| ||.|| || |||||||| &5' --TGGC-CATAGCCAGAGACCTTCA 3'
Asb2mmu-miR-541beg:290end:310pic:3' TCACAC-TGGTTGTAGTCTTAGGGAA 5'& | ||. .|||||||| &5' -----GAACTTGTA--GGAATCCCT- 3'
Asb2mmu-miR-615-5pbeg:52end:73pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& || |||.| |||||||| &5' ---CCT-GCATCCAGGACCCCC 3'
Asb2mmu-miR-671-3pbeg:225end:248pic:3' CCACCTCGGGA--CTCTTGGCCT 5'& |||.||| ||||.|.|| &5' --TGGGGCCAGGGGAGAGCTGG- 3'
Asb2mmu-miR-677beg:296end:317pic:3' AGTCTTCGATTAGT-AGTGACTT 5'& .||.| ||| ||||||.| &5' -TAGGA----ATCCCTCACTGGA 3'
Asb2mmu-miR-677beg:363end:374pic:3' AGTCTTCGATTAGTAGTGACTT 5'& |||||||. &5' --------------TCACTGAG 3'
Asb2mmu-miR-690beg:263end:284pic:3' AAACCAACACTCGGATCGGAAA 5'& || | | |||.||||| &5' ---GGCAGGAATCCTGGCCTT- 3'
Asb2mmu-miR-693-3pbeg:225end:247pic:3' AATGTCGGTGTAGACTTTCGACG 5'& |. .|||| . ||.||||| &5' -TGGGGCCAGGG--GAGAGCTG- 3'
Asb2mmu-miR-720beg:37end:55pic:3' ACCTCCGGGGT-CGCTCTA 5'& ||| |||||| |.|. &5' -GGACGCCCCAGGTGG--- 3'
Asb2mmu-miR-743b-5pbeg:236end:256pic:3' ACTACCTG-TGGTCAGACTTGT 5'& ||| .| |||||..|| &5' ----GGAGAGCTGGTCTGGGCA 3'
Asb2mmu-miR-744beg:182end:200pic:3' ACGACAATC-GGGATCGGGGCGT 5'& || || ||| ||.|.|| &5' -GC----AGACCC--GCTCTGC- 3'
Asb2mmu-miR-759beg:189end:200pic:3' CAGTTTTAACAAACGTGAGACG 5'& |.|||||| &5' --------------CGCTCTGC 3'
Asb2mmu-miR-764-5pbeg:367end:377pic:3' TCCTCCTGTACACTCGTGG 5'& ||||||| &5' -----------TGAGCAC- 3'
Asb2mmu-miR-872beg:78end:97pic:3' GGACTTGATTGTTCATTGGAA 5'& |||| ||.||||| &5' ---GAACAGGT--GTGACCTT 3'
Asb2mmu-miR-1937cbeg:31end:43pic:3' ACCCCCGAGAAGGCCCTA 5'& .|||||||| &5' --------TTTCCGGGA- 3'
Asb2mmu-miR-1937bbeg:33end:43pic:3' ACCCCCGAGCAGGCCCTA 5'& ||||||| &5' ----------TCCGGGA- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Asb2RAID00301729mmu-mir-325miRNAMI0000597Asb2mRNA65256Prediction0.1828
Asb2RAID00675781mmu-miR-320-3pmiRNAMIMAT0000666Asb2mRNA65256Prediction0.1828
Asb2RAID01434403mmu-miR-7004-3pmiRNAMIMAT0027913Asb2mRNA65256Prediction0.1828
Asb2RAID01565198mmu-miR-7116-3pmiRNAMIMAT0028130Asb2mRNA65256Prediction0.1828
Asb2RAID02255771mmu-let-7f-1-3pmiRNAMIMAT0004623Asb2mRNA65256Prediction0.1828
Asb2RAID02512116mmu-miR-212-3pmiRNAMIMAT0000659Asb2mRNA65256Prediction0.1828
Asb2RAID03118506mmu-miR-331-3pmiRNAMIMAT0000571Asb2mRNA65256Prediction0.1828
Asb2RAID03310705mmu-miR-132-3pmiRNAMIMAT0000144Asb2mRNA65256Prediction0.1828
Asb2RAID03425280mmu-miR-325-3pmiRNAMIMAT0004640Asb2mRNA65256Prediction0.1828
Asb2RAID03899708mmu-miR-6951-3pmiRNAMIMAT0027803Asb2mRNA65256Prediction0.1828