DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 70127 Dpf3 auCUCGUCGUUUAUUACUAAGc || ::| :: |||||||| guGACUGGGUGGCAAUGAUUCa 2 21 1137 1158 [mm9:12:84315570-84315591:-] 0.5879 152 7 -14.11 -0.1430 MIMAT0004526 mmu-miR-101a* 70127 Dpf3 cgUAGUCGUGACACUAUUGACu | ||||| ||||||||| gcACCAGCA---UGAUAACUGa 2 21 1322 1340 [mm9:12:84315388-84315406:-] 0.6278 160 7 -22.92 -0.3713 MIMAT0003473 mmu-miR-133a* 70127 Dpf3 uaaaccAAG--GUAAA-AUGGUCg ||| ||||| |||||| cagcucUUCCUCAUUUCUACCAGc 2 16 204 227 [mm9:12:84316501-84316524:-] 0.5441 126 6 -15.86 -0.1640 MIMAT0000152 mmu-miR-140* 70127 Dpf3 ggcaccAAGAUGGGACACCAu ||| : ||||||| uugaccUUCAGAACUGUGGUg 2 16 767 787 [mm9:12:84315941-84315961:-] 0.5607 147 7 -15.79 -0.2055 MIMAT0004533 mmu-miR-141* 70127 Dpf3 agGUUGUGACGUGACCUUC-UAc |:| || ||||||||| || uaCGAGUCU-CACUGGAAGCAUc 2 21 504 525 [mm9:12:84316203-84316224:-] 0.5587 130 0 -19.43 -0.1081 MIMAT0004536 mmu-miR-151-5p 70127 Dpf3 ugaUCU--GACACUCGAG-GAGCu ||| ||| |:|||| |||| uccAGACUCUGCGGGCUCUCUCGu 2 19 1889 1912 [mm9:12:84314816-84314839:-] 0.5529 129 0 -23.08 -0.1083 MIMAT0004544 mmu-miR-193* 70127 Dpf3 agUAGAACGGGCGUUUCUGGGu :| | | :: |||||||| cuGUGUGGAUUCAAAAGACCCa 2 21 1818 1839 [mm9:12:84314889-84314910:-] 0.5339 148 7 -16.84 -0.3940 MIMAT0000230 mmu-miR-199a-3p 70127 Dpf3 auUGGUUACACGUCUGAUGACa || :| | || ||||||| caACAGAAGCACACACUACUGa 2 21 178 199 [mm9:12:84370213-84370234:-] 0.5840 156 7 -13.36 -0.4200 MIMAT0004572 mmu-miR-290-3p 70127 Dpf3 cccgaaUUUUGAUCCGCCGUGAAa ::|||| :||||||| ccagcgGGAACU---UGGCACUUu 2 19 223 243 [mm9:12:84316485-84316505:-] 0.5562 146 7 -17.81 -0.3831 MIMAT0000370 mmu-miR-292-3p 70127 Dpf3 ugugaGUUUUGGACCGCCGUGAAa |:::| || :||||||| accagCGGGAACU--UGGCACUUu 2 20 222 243 [mm9:12:84316485-84316506:-] 0.5441 148 7 -17.66 -0.3657 MIMAT0004573 mmu-miR-293* 70127 Dpf3 guUUUACAGUGUGUC-AAACUCa :| ||| |:::|| |||||| gaGACUGU-AUGUAGCUUUGAGa 2 21 952 973 [mm9:12:84315755-84315776:-] 0.5607 126 6 -12.71 -0.5650 MIMAT0000374 mmu-miR-296-5p 70127 Dpf3 ugUCCUAACUCCCCCCCGGGa |||| | ||||||| ggAGGA-ACACUUGGGGCCCu 2 20 697 716 [mm9:12:84316012-84316031:-] 0.5607 141 7 -22.86 -0.1218 MIMAT0004578 mmu-miR-300* 70127 Dpf3 uguuuccuAUUGGA---GAGAAGUu ||:|:| ||||||| cucacccuUAGCUUAGGCUCUUCAu 2 15 428 452 [mm9:12:84316276-84316300:-] 0.5706 145 7 -13.18 -0.1295 MIMAT0004583 mmu-miR-130b* 70127 Dpf3 ucAUCACGUUGUCCCUUUCUca || | : | | |||||| uaUAUUUUUA-AAUGAAAGAca 3 21 73 93 [mm9:12:84370319-84370339:-] 0.5816 122 0 -3.87 -0.2050 MIMAT0004616 mmu-miR-30c-1* 70127 Dpf3 ccucAUUUGUUGGGAGAGGGUc |:|: || |||||||| gcuuUGAGAAA--CUCUCCCAg 2 19 965 984 [mm9:12:84315744-84315763:-] 0.5607 151 7 -20.14 -0.3211 MIMAT0005438 mmu-miR-30c-2* 70127 Dpf3 ucucAUUUGUCGGAAGAGGGUc |:|: | | ||||||| gcuuUGAGAAAC--UCUCCCAg 2 19 965 984 [mm9:12:84315744-84315763:-] 0.5607 143 7 -19.44 -0.3009 MIMAT0004617 mmu-miR-148a* 70127 Dpf3 ucagccuCACAGAG-UCUUGAAa ||||:|| ||||||| gucuauuGUGUUUCAAGAACUUg 2 16 393 415 [mm9:12:84316313-84316335:-] 0.5860 162 7 -19.10 -0.4189 MIMAT0004617 mmu-miR-148a* 70127 Dpf3 ucagccucacagaGUCUUGAAa |||||||| gccaucuugaagaCAGAACUUg 2 10 537 558 [mm9:12:84316170-84316191:-] 0.5468 145 7 -10.52 -0.1804 MIMAT0004622 mmu-let-7c-1* 70127 Dpf3 ccUUUCGAUCUUCCAACAU-GUc :||| |||| |||||| || gaGAAG--AGAA-GUUGUAGCAu 2 21 589 608 [mm9:12:84316120-84316139:-] 0.5128 123 0 -11.60 -0.2731 MIMAT0004626 mmu-miR-18a* 70127 Dpf3 gucuuccuCGUGAAUCCCGUCa || | ||||||| aaucguuuGCCCAAAGGGCAGg 2 15 1355 1376 [mm9:12:84315352-84315373:-] 0.6278 146 7 -14.14 -0.1678 MIMAT0004628 mmu-miR-21* 70127 Dpf3 cuGUCGGGUAGCUGACGACAAc ||| ||| : :||||||| gcCAG-CCAGUAUUUGCUGUUc 2 21 723 743 [mm9:12:84315985-84316005:-] 0.5607 154 7 -19.21 -0.1049 MIMAT0000549 mmu-miR-322* 70127 Dpf3 caCAACGUCG-CGAAGUACAAa || | | | | ||||||| cuGUGGAAACUUCCUCAUGUUc 2 20 267 288 [mm9:12:84316440-84316461:-] 0.5562 146 7 -9.26 -0.1214 MIMAT0000595 mmu-miR-345-5p 70127 Dpf3 uucGUGACCUGAUCCCC-AGUCg ||:| ||: ||||| |||| ugcCAUUUGAUCAGGGGUUCAGa 2 20 660 682 [mm9:12:84316046-84316068:-] 0.5197 135 0 -22.06 -0.1683 MIMAT0004656 mmu-miR-345-3p 70127 Dpf3 caGAGGUCUG----GGGAUCAAGUCc |||::| | ::||||||| | gaCUCUGGUCAUUGUUCUAGUUCUGa 2 21 45 70 [mm9:12:84370342-84370367:-] 0.5860 123 0 -18.67 -0.1168 MIMAT0000605 mmu-miR-350 70127 Dpf3 cuuucacauacccGAAACACUu :||||||| uuggaggaagccaUUUUGUGAc 2 10 324 345 [mm9:12:84316383-84316404:-] 0.5788 141 7 -9.65 -0.2480 MIMAT0004665 mmu-miR-218-1* 70127 Dpf3 ccacGAACUGCCUUGGUACAAa || || | | ||||||| cucaCUGGAAGCAUCCAUGUUu 2 19 511 532 [mm9:12:84316196-84316217:-] 0.5468 158 7 -14.06 -0.1701 MIMAT0005444 mmu-miR-218-2* 70127 Dpf3 gcgccAC-GAACUGUCUU-GGUAc || :|||: :||| |||| cuucuUGUUUUGGAGGAAGCCAUu 2 18 315 338 [mm9:12:84316390-84316413:-] 0.5788 120 0 -10.83 -0.5997 MIMAT0004667 mmu-miR-199b 70127 Dpf3 auUGGUUACACGUCUGAUGACa || :| | || ||||||| caACAGAAGCACACACUACUGa 2 21 178 199 [mm9:12:84370213-84370234:-] 0.5840 156 7 -13.36 -0.4200 MIMAT0000744 mmu-miR-380-5p 70127 Dpf3 gcguACA-AGAU-ACCAGUUGGUa ||| ||: | ||||||| auuuUGUGACUGCUCAUCAACCAc 2 19 336 359 [mm9:12:84316369-84316392:-] 0.6014 144 7 -11.19 -0.2729 MIMAT0004704 mmu-miR-335-3p 70127 Dpf3 ccaguccucguuaUUACUUUUu |||||||: auauauauuuuuaAAUGAAAGa 2 10 70 91 [mm9:12:84370321-84370342:-] 0.5816 129 0 -7.22 -0.1598 MIMAT0003388 mmu-miR-376b* 70127 Dpf3 auUGGUAUCUUCCUUA-UAGGUg ||: | ||| |||| ||||| gcACUUUUGAA-GAAUAAUCCAg 2 21 237 258 [mm9:12:84316470-84316491:-] 0.5562 130 0 -11.87 -0.1142 MIMAT0003409 mmu-miR-467a 70127 Dpf3 gcguauauguacguCCGUGAAu ||||||| accagcgggaacuuGGCACUUu 2 9 222 243 [mm9:12:84316485-84316506:-] 0.5441 140 7 -16.45 -0.3716 MIMAT0002889 mmu-miR-532-5p 70127 Dpf3 ugcCAGGAUGUGAGU-UCCGUAc ||:| || ||| |||||| cauGUUC-ACUGUCACAGGCAUc 2 20 282 303 [mm9:12:84316425-84316446:-] 0.5562 125 6 -14.51 -0.3545 MIMAT0005295 mmu-miR-376c* 70127 Dpf3 auuUGUAUCUUCCUUA-UAGGUg || | :| |||| ||||| ggcACUUUUGAAGAAUAAUCCAg 2 20 236 258 [mm9:12:84316470-84316492:-] 0.5562 123 0 -10.28 -0.1142 MIMAT0005460 mmu-miR-1224 70127 Dpf3 gagguggagggguCAGGAGUg ||||||| cuugucacagaguGUCCUCAc 2 9 412 432 [mm9:12:84316296-84316316:-] 0.5860 140 7 -19.44 -0.3641 MIMAT0003732 mmu-miR-668 70127 Dpf3 ccaucacccggcuCGGCUCACUGu || ||||||| cugcaacuucuuuGCAGAGUGACc 2 12 1641 1664 [mm9:12:84315064-84315087:-] 0.6278 147 7 -13.84 -0.1551 MIMAT0003892 mmu-miR-762 70127 Dpf3 cgagacagggccgGGGUCGGGg :||||||| uuuugaagaauaaUCCAGCCCc 2 10 241 262 [mm9:12:84316466-84316487:-] 0.5562 141 7 -23.11 -0.3163 MIMAT0004824 mmu-miR-673-3p 70127 Dpf3 ccacgugUCUUGAGUCGGGGCCu | ||: ||||||||| uugaagaAUAAUCCAGCCCCGGc 2 17 243 265 [mm9:12:84316463-84316485:-] 0.5562 160 7 -25.47 -0.2058 MIMAT0003898 mmu-miR-760 70127 Dpf3 agggGUGUCUGGGUCUCGGc || ||::||||||| guggCAAUGAUUCAGAGCCc 2 17 1145 1164 [mm9:12:84315564-84315583:-] 0.5879 156 7 -19.75 -0.2929 MIMAT0003455 mmu-miR-679 70127 Dpf3 uggUUCUCAGUGGAGUGUCAGg |:| | || ||||||| uugAGGUGAGACAACACAGUCu 2 20 791 812 [mm9:12:84315916-84315937:-] 0.5607 151 7 -16.76 -0.2277 MIMAT0003462 mmu-miR-684 70127 Dpf3 aacUGAACUUCCCUUUUGa ||| || ||||||| ccaACUACAA-GGAAAACg 2 17 100 117 [mm9:12:84316611-84316628:-] 0.5759 150 7 -8.67 -0.5950 MIMAT0003464 mmu-miR-686 70127 Dpf3 agaAGUGGCAGACCCUUCGUUa || :|||:| ||||||| ggcUC-UCGUUU--GAAGCAAg 2 20 1204 1222 [mm9:12:84315506-84315524:-] 0.5171 150 7 -15.02 -0.3092 MIMAT0003474 mmu-miR-694 70127 Dpf3 gaAGUCCGU-UGUAAAAGUc || | :| |:|||||:| guUCUGAUAUAUAUUUUUAa 2 18 64 83 [mm9:12:84370329-84370348:-] 0.5860 136 0 -6.14 -0.1190 MIMAT0003479 mmu-miR-669c 70127 Dpf3 ugUGUGUAGGUGUGUG-UUGAUa ::|: |:|| | || ||||| gaGUAUCUUCAGAGACUAACUAc 2 21 1931 1953 [mm9:12:84314775-84314797:-] 0.5529 124 0 -10.04 -0.4067 MIMAT0003492 mmu-miR-702 70127 Dpf3 cucgccccAUUUC-CCACCCGu |::|| ||||||| ucaagcucUGGAGAGGUGGGCa 2 14 894 915 [mm9:12:84315813-84315834:-] 0.5607 148 7 -22.97 -0.2009 MIMAT0003495 mmu-miR-705 70127 Dpf3 acGGGUGGGGUGGAGGGUGg ::| ::|::|||||||| uuUUCCUUCUGCCUCCCACg 2 19 121 140 [mm9:12:84370272-84370291:-] 0.5806 158 7 -25.26 -0.3864 MIMAT0003498 mmu-miR-708* 70127 Dpf3 gaucuuCGAGUGUC-AGAUCAAc | |||: | ||||||| gacucuGGUCAUUGUUCUAGUUc 2 17 45 67 [mm9:12:84370345-84370367:-] 0.5860 151 7 -12.57 -0.8972 MIMAT0003499 mmu-miR-709 70127 Dpf3 agGAGGACGGAGACGGAGg ||::| |:|||||||| gcCUUUUCCUUCUGCCUCc 2 18 118 136 [mm9:12:84370276-84370294:-] 0.5806 165 7 -30.90 -0.6630 MIMAT0003500 mmu-miR-710 70127 Dpf3 gaGUUGAGA-GGGGUUC-UGAACc | |:| | :::|||| ||||| guCUAUUGUGUUUCAAGAACUUGu 2 21 393 416 [mm9:12:84316312-84316335:-] 0.5860 123 0 -13.98 -0.5018 MIMAT0004210 mmu-miR-804 70127 Dpf3 agguccacuccuugUUGAGUGu ||||||| gcucuucauccugaAACUCACa 2 9 444 465 [mm9:12:84316263-84316284:-] 0.5706 140 7 -12.76 -0.5611 MIMAT0004236 mmu-miR-741 70127 Dpf3 agauguaucuuaCCGUAGAGAGu |||||||||| uucacugucacaGGCAUCUCUCu 2 12 286 308 [mm9:12:84316420-84316442:-] 0.5562 155 7 -19.22 -0.1786 MIMAT0004844 mmu-miR-880 70127 Dpf3 agaugagUCUC-UCCUAC-CUCAu |||| |||||| |||| ccagggaAGAGCAGGAUGAGAGUc 2 16 203 226 [mm9:12:84370186-84370209:-] 0.5840 130 0 -20.04 -0.4570 MIMAT0004845 mmu-miR-881* 70127 Dpf3 ucuACACUGACAAUAGAGAGAc ||| || | |||||||| cacUGUCACAGGCAUCUCUCUu 2 20 288 309 [mm9:12:84316419-84316440:-] 0.5562 163 7 -13.89 -0.3819 MIMAT0004846 mmu-miR-881 70127 Dpf3 agauaaguCUUUUCUGUGUCAa ||:| ||||||| cuugagguGAGACAACACAGUc 2 15 790 811 [mm9:12:84315917-84315938:-] 0.5607 150 7 -12.71 -0.1457 MIMAT0004848 mmu-miR-883a-5p 70127 Dpf3 caUUGAC-GAUGAAGAGAG-UCGu | ||| || || ||||| ||| gcAUCUGUCUCCUCCUCUCAAGCu 2 21 1766 1789 [mm9:12:84314939-84314962:-] 0.6040 131 0 -17.36 -0.1135 MIMAT0004863 mmu-miR-220 70127 Dpf3 uucacAGACUGUGACACCACc || || ||||||||| gaccuUCAGA-ACUGUGGUGu 2 17 769 788 [mm9:12:84315940-84315959:-] 0.5607 158 7 -16.24 -0.1149 MIMAT0004884 mmu-miR-466h 70127 Dpf3 augUGUGUUCGUGUACGUGUGu ::|||| || | |||||| uggGUACAA-CAGAAGCACACa 2 20 172 192 [mm9:12:84370220-84370240:-] 0.5840 133 6 -18.39 -0.1123 MIMAT0004884 mmu-miR-466h 70127 Dpf3 auguGUGUUCGUGUACGUGUGu | | |:|:|||||||| ucucCUCCUGUAUAUGCACACa 2 19 76 97 [mm9:12:84316631-84316652:-] 0.5426 158 7 -21.40 -0.6473 MIMAT0004888 mmu-miR-493 70127 Dpf3 ggaccgugugucaucCUGGAAGu ||||||| acuaggugguuccuuGACCUUCa 2 9 754 776 [mm9:12:84315952-84315974:-] 0.5607 140 7 -17.78 -0.3495 MIMAT0004893 mmu-miR-574-5p 70127 Dpf3 ugUGUGAGUGUGUGUGUGUG-AGu || ||| ||| | ||||| || ugAC-CUCCCAC-CCCACACAUCc 2 22 176 197 [mm9:12:84316531-84316552:-] 0.5321 125 0 -18.52 -0.1260 MIMAT0004930 mmu-miR-466d-5p 70127 Dpf3 guaCAUG-UACAUGCGUGUGUGu |||| | | |||||||| uggGUACAACAGAAGCACACACu 2 20 172 194 [mm9:12:84370218-84370240:-] 0.5840 154 7 -19.74 -0.9318 MIMAT0005292 mmu-miR-582-3p 70127 Dpf3 aacccaagucaacAAGUUGUCc |||||||| caaaggaugcccaUUCAACAGu 2 10 914 935 [mm9:12:84315793-84315814:-] 0.5607 145 7 -10.03 -0.1340 MIMAT0005830 mmu-miR-466l 70127 Dpf3 uuAUACACAC-GUACAUAAAUAu || | || :|| ||||| | ucUAGUUCUGAUAUAUAUUUUUa 2 21 60 82 [mm9:12:84370330-84370352:-] 0.5860 123 0 -1.86 -0.1056 MIMAT0005838 mmu-miR-669j 70127 Dpf3 acaaacguacacuCAUAUACGu |||||||| gaggucuccuccuGUAUAUGCa 2 10 72 93 [mm9:12:84316635-84316656:-] 0.5426 145 7 -14.06 -0.2457 MIMAT0005840 mmu-miR-669i 70127 Dpf3 cauacguacacACAUAUACGu ||||||||| aggucuccuccUGUAUAUGCa 2 11 73 93 [mm9:12:84316635-84316655:-] 0.5426 150 7 -13.99 -0.2457 MIMAT0005841 mmu-miR-669h-5p 70127 Dpf3 cguGAGUUGAUAUGUGGGUACGUa ||||: || :||||||| ggcCUCAGAGCUAGUUCCAUGCAu 2 22 1705 1728 [mm9:12:84315000-84315023:-] 0.6278 157 7 -24.17 -0.7314 MIMAT0005845 mmu-miR-466k 70127 Dpf3 aguguacaUGUACAUGUGUGUGu ||| :||||||| uggguacaACAGAAGCACACACu 2 16 172 194 [mm9:12:84370218-84370240:-] 0.5840 147 7 -16.32 -0.9285 MIMAT0005848 mmu-miR-466j 70127 Dpf3 aaugUGUGUACGUGUACGUGUGu ::||| || | |||||| uuggGUACA-ACAGAAGCACACa 2 20 171 192 [mm9:12:84370220-84370241:-] 0.5840 125 6 -17.20 -0.1146 MIMAT0005848 mmu-miR-466j 70127 Dpf3 aauguGUGUACGUGUACGUGUGu | | ||:|:|||||||| gucucCUCCUGUAUAUGCACACa 2 19 75 97 [mm9:12:84316631-84316653:-] 0.5426 166 7 -21.81 -0.6399 MIMAT0005851 mmu-miR-1193 70127 Dpf3 cuaucauuuugCCCACUGGAu | ||||||| acuucuuugcaGAGUGACCUg 2 11 1646 1666 [mm9:12:84315062-84315082:-] 0.6278 142 7 -13.18 -0.1208 MIMAT0005853 mmu-miR-669e 70127 Dpf3 uacuuGUACGUGUGUGU-UCUGu ::| :|::|||| |||| ccuccUGUAUAUGCACACAGACc 2 18 79 101 [mm9:12:84316627-84316649:-] 0.5426 121 0 -17.93 -0.3255 MIMAT0005858 mmu-miR-1197 70127 Dpf3 ucuucaUC-UGGUA-CACAGGAu || ||::| ||||||| accuucAGAACUGUGGUGUCCUu 2 16 770 792 [mm9:12:84315936-84315958:-] 0.5607 149 7 -15.20 -0.1549 MIMAT0005858 mmu-miR-1197 70127 Dpf3 ucUUCAUC--UGGUACACAGGAu || | | || : ||||||| agAACUUGUCACAGAGUGUCCUc 2 20 408 430 [mm9:12:84316298-84316320:-] 0.5860 146 7 -13.54 -0.3071 MIMAT0007869 mmu-miR-1899 70127 Dpf3 ccuucGUCUAAGCC--GGUAGCGa ::||||| | ||||||| uucccUGGAUUCAGCUCCAUCGCu 2 18 1410 1433 [mm9:12:84315295-84315318:-] 0.6278 156 7 -20.44 -0.1145 MIMAT0007873 mmu-miR-1896 70127 Dpf3 gaggaguggGUGGUAGUCUCUc :|:| ||||||| aaagcagagUAUCUUCAGAGAc 2 14 1925 1946 [mm9:12:84314782-84314803:-] 0.5529 149 7 -13.68 -0.4529 MIMAT0007875 mmu-miR-1898 70127 Dpf3 cuaGGGGACA-CUUGGAAC-UGGa |||:||| : :|||| ||| gagCCCUUGUCCGUUCUUGCACCc 2 20 1159 1182 [mm9:12:84315546-84315569:-] 0.5952 122 0 -21.97 -0.1822 MIMAT0009391 mmu-miR-1928 70127 Dpf3 cucgaccguUACAUCGa ||||||| agagacuguAUGUAGCu 2 9 951 967 [mm9:12:84315761-84315777:-] 0.5607 140 7 -17.44 -0.5688 MIMAT0009405 mmu-miR-1941-5p 70127 Dpf3 uuCGGAGACAUGGUC---GUA-GAGGGa ||| || || :| ||| ||||| cuGCCACUCCACAGGAGUCAUCCUCCCc 2 23 1546 1573 [mm9:12:84315155-84315182:-] 0.6278 121 0 -19.80 -0.1529 MIMAT0009408 mmu-miR-1943 70127 Dpf3 agguccacGGGUCUA---GGAGGGAa |||| :| ||||||| uucugccuCCCACGUGUCCCUCCCUc 2 16 127 152 [mm9:12:84370260-84370285:-] 0.5806 146 7 -22.99 -0.4686 MIMAT0009433 mmu-miR-1960 70127 Dpf3 ucGGGAGAAGAUUGUCGU-GACc |||| | | :| |||| ||| gcCCCUGUCCAGAGAGCAUCUGu 2 21 1751 1773 [mm9:12:84314955-84314977:-] 0.6278 128 0 -16.18 -0.2177 MIMAT0009438 mmu-miR-1965 70127 Dpf3 acgcgGUGAUG-CCGGGCCGAa :| | | | ||||||| aagaaUAAUCCAGCCCCGGCUc 2 17 246 267 [mm9:12:84316461-84316482:-] 0.5562 143 7 -16.91 -0.1271 MIMAT0009458 mmu-miR-1981 70127 Dpf3 cggugcagaUUCG-GGUCGGA-AAUg |||| || |||| ||| gugguggggAAGCUCCUGCCUAUUAc 2 16 481 506 [mm9:12:84316222-84316247:-] 0.5587 122 0 -20.94 -0.1007 MIMAT0009459 mmu-miR-1982* 70127 Dpf3 ggAGGGGUCCUGGGAGGGUu |||:: | ||||||| uuUCCUUCUG--CCUCCCAc 2 19 122 139 [mm9:12:84370273-84370290:-] 0.5806 143 7 -18.97 -0.3917 MIMAT0009459 mmu-miR-1982* 70127 Dpf3 ggAGGGGUCCUGGGAGGGUu | |||| || ||||||| ccUACCCAUGA-CCUCCCAc 2 19 168 186 [mm9:12:84316542-84316560:-] 0.5321 160 7 -26.02 -0.1347 MIMAT0011214 mmu-miR-2138 70127 Dpf3 uaAGGCGGUUCGGGCA-AGGGAa ||:||| | ||| ||||| cuUCUGCCUCCCACGUGUCCCUc 2 21 126 148 [mm9:12:84370264-84370286:-] 0.5806 128 0 -25.08 -0.3086 MIMAT0011287 mmu-miR-2183 70127 Dpf3 uccuCCAGUCCCCAAGUu | ||||||||||| auuuGAUCAGGGGUUCAg 2 15 664 681 [mm9:12:84316047-84316064:-] 0.5197 162 7 -22.69 -0.1534 MIMAT0012772 mmu-miR-599 70127 Dpf3 caaACUAUUUGACUGUGUu |||| |||||||||| gcaUGAU-AACUGACACAu 2 17 1328 1345 [mm9:12:84315383-84315400:-] 0.6278 166 7 -18.78 -0.5401 MIMAT0015641 mmu-miR-3470b 70127 Dpf3 ggucgGACCAGAUGUCUCACu || ||| |||||||| aagaaCUUGUC-ACAGAGUGu 2 17 407 426 [mm9:12:84316302-84316321:-] 0.5860 158 7 -20.04 -0.2729 MIMAT0015641 mmu-miR-3470b 70127 Dpf3 ggucgGACCAGAUGUCUCACu || |:|:||||||| ugcaaCUUCUUUGCAGAGUGa 2 17 1642 1662 [mm9:12:84315066-84315086:-] 0.6278 156 7 -19.99 -0.3507 MIMAT0000124 mmu-miR-15b 70127 Dpf3 acaUUUGGUACUACAC-GACGAu ||:|||| |||| ||||| aggAAGCCAUUUUGUGACUGCUc 2 20 328 350 [mm9:12:84316378-84316400:-] 0.5788 139 0 -20.95 -0.2582 MIMAT0004528 mmu-miR-125a-3p 70127 Dpf3 ccgaGGGUUCUUGGAGU-GGACa |::|:| |:||| |||| uuagCUUAGGCUCUUCAUCCUGa 2 19 435 457 [mm9:12:84316271-84316293:-] 0.5706 122 0 -19.59 -0.5995 MIMAT0000147 mmu-miR-135a 70127 Dpf3 aguguauccuuaUUUUUCGGUAu |::||||||| uucuuguuuuggAGGAAGCCAUu 2 12 316 338 [mm9:12:84316390-84316412:-] 0.5788 147 7 -13.75 -0.5378 MIMAT0000150 mmu-miR-138 70127 Dpf3 gccGGACUAAGUGUUGUGGUCGa ::||| |||::||||||| gccUUUGACGCACGGCACCAGCa 2 21 1308 1330 [mm9:12:84315398-84315420:-] 0.6278 168 7 -27.78 -0.2421 MIMAT0000151 mmu-miR-140 70127 Dpf3 gaugguaucccauuUUGGUGAc ||||||| ugugacugcucaucAACCACUc 2 9 340 361 [mm9:12:84316367-84316388:-] 0.6014 140 7 -12.95 -0.1370 MIMAT0000155 mmu-miR-142-3p 70127 Dpf3 agGUAUU-UCAUCCUUUGUGAUGu :| || || || | ||||||| ggUACAACAGAAGCACACACUACu 2 22 174 197 [mm9:12:84370215-84370238:-] 0.5840 160 7 -11.08 -0.5027 MIMAT0000158 mmu-miR-146a 70127 Dpf3 uugGGUACCUUAAG-UCAAGAgu :||| | ||| |||||| uggUCAUUG--UUCUAGUUCUga 3 20 50 70 [mm9:12:84370342-84370362:-] 0.5860 131 0 -13.16 -0.2724 MIMAT0000211 mmu-miR-182 70127 Dpf3 gccACACUCAAGAUGGUAACGGUUu ||| || | ||: ||||||| ccaUGU-AG-UAUAUGUUUGCCAAu 2 23 1031 1053 [mm9:12:84315675-84315697:-] 0.5607 154 7 -12.94 -0.5245 MIMAT0000225 mmu-miR-195 70127 Dpf3 cgguuauaAAGACAC-GACGAu ||:|||| ||||| ggaagccaUUUUGUGACUGCUc 2 14 329 350 [mm9:12:84316378-84316399:-] 0.6014 125 0 -18.74 -0.2914 MIMAT0000233 mmu-miR-200b 70127 Dpf3 aguaguaaugguccGUCAUAAu ||||||| uugagaaacucuccCAGUAUUg 2 9 968 989 [mm9:12:84315739-84315760:-] 0.5607 140 7 -10.42 -0.1200 MIMAT0000233 mmu-miR-200b 70127 Dpf3 agUAGUAA-UGGUCCGUCA-UAAu |||||| : || |||| ||| agAUCAUUGGGCA--CAGUGAUUa 2 21 1112 1133 [mm9:12:84315595-84315616:-] 0.5806 120 0 -11.66 -0.2331 MIMAT0000381 mmu-miR-34c 70127 Dpf3 cguuagucgauUGAUGUGACGGa |||:||||||| gaccuugauccACUGCACUGCCa 2 13 642 664 [mm9:12:84316064-84316086:-] 0.4788 156 7 -18.99 -0.1414 MIMAT0000382 mmu-miR-34b-5p 70127 Dpf3 uguuagucgauUAAUGUGACGGa | |:||||||| gaccuugauccACUGCACUGCCa 2 13 642 664 [mm9:12:84316064-84316086:-] 0.4788 148 7 -15.44 -0.1414 MIMAT0000385 mmu-miR-106a 70127 Dpf3 gaUGGACG--UGACAAUCGUGAAAc ||| || : ||:||||||| cuACCAGCGGGAACUUGGCACUUUu 2 22 220 244 [mm9:12:84316484-84316508:-] 0.5441 152 7 -20.16 -0.1527 MIMAT0000386 mmu-miR-106b 70127 Dpf3 uagacgugacAGUCGUGAAAu |::||||||| cagcgggaacUUGGCACUUUu 2 12 224 244 [mm9:12:84316484-84316504:-] 0.5562 147 7 -12.05 -0.1631 MIMAT0000526 mmu-miR-15a 70127 Dpf3 gugUUUGGUAAUACAC-GACGAu ||:||||| |||| ||||| aggAAGCCAUUUUGUGACUGCUc 2 20 328 350 [mm9:12:84316378-84316400:-] 0.5788 147 0 -22.25 -0.2560 MIMAT0000527 mmu-miR-16 70127 Dpf3 gcgguuaUAAAUGCAC-GACGAu |||| :||| ||||| ggaagccAUUU-UGUGACUGCUc 2 16 329 350 [mm9:12:84316378-84316399:-] 0.6014 121 0 -16.26 -0.2914 MIMAT0000529 mmu-miR-20a 70127 Dpf3 gaUGGACGUGAU--AUUCGUGAAAu ||| ||: | | :||||||| cuACCAGCGGGAACUUGGCACUUUu 2 22 220 244 [mm9:12:84316484-84316508:-] 0.5441 152 7 -18.83 -0.1527 MIMAT0000540 mmu-miR-93 70127 Dpf3 gaUGGACGUGCUUG--UCGUGAAAc ||| ||: |||| :||||||| cuACCAGCGGGAACUUGGCACUUUu 2 22 220 244 [mm9:12:84316484-84316508:-] 0.5441 168 7 -25.13 -0.1557 MIMAT0000542 mmu-miR-34a 70127 Dpf3 uguuggUCGAUUCUGUGACGGu | | | :||||||| accuugAUCCACUGCACUGCCa 2 17 643 664 [mm9:12:84316064-84316085:-] 0.4788 144 7 -19.71 -0.1414 MIMAT0000597 mmu-miR-346 70127 Dpf3 ucuccgucCGUGAGCCC-GUCUGu |||| :||| ||||| --------GCACAUGGGACAGACu 2 16 1 16 [mm9:12:84370396-84370411:-] 0.5860 127 0 -19.95 -0.1755 MIMAT0000612 mmu-miR-135b 70127 Dpf3 aguguauccuuACUU--UUCGGUAu ||:| ||||||| gcuucuuguuuUGGAGGAAGCCAUu 2 13 314 338 [mm9:12:84316390-84316414:-] 0.5788 143 7 -14.21 -0.5378 MIMAT0000649 mmu-miR-17 70127 Dpf3 gauggaCGUGACAUUCGUGAAAc | ||| | :||||||| cagcggGAACU-U-GGCACUUUu 2 18 224 244 [mm9:12:84316484-84316504:-] 0.5562 145 7 -11.60 -0.1631 MIMAT0000653 mmu-miR-28 70127 Dpf3 gaguuAUCUGACACUCGAGGAa ||| | || ||||||| auuuuUAGUC-GUCAGCUCCUg 2 18 1467 1487 [mm9:12:84315241-84315261:-] 0.6278 155 7 -15.14 -0.1500 MIMAT0000657 mmu-miR-200c 70127 Dpf3 agguagUAAUGGGCCGUCAUAAu | | :|| ||||||| ugagaaACUCUCC--CAGUAUUg 2 18 969 989 [mm9:12:84315739-84315759:-] 0.5607 142 7 -12.24 -0.1111 MIMAT0000657 mmu-miR-200c 70127 Dpf3 aggUAGUAAUGGGCCGUCA-UAAu ||||||: | |||| ||| cagAUCAUUGGGC-ACAGUGAUUa 2 21 1111 1133 [mm9:12:84315595-84315617:-] 0.5806 122 0 -12.56 -0.2498 MIMAT0000661 mmu-miR-214 70127 Dpf3 ugACGGACAGACACGGACGACa | :|| :| ||||||| gcUCUCUUCUUCCUCCUGCUGg 2 21 1787 1808 [mm9:12:84314920-84314941:-] 0.5801 144 7 -18.36 -0.2300 MIMAT0000663 mmu-miR-218 70127 Dpf3 uguACCAAUCUAG--UUCGUGUu ||| || | | ||||||| uuuUGGGUACAACAGAAGCACAc 2 19 169 191 [mm9:12:84370221-84370243:-] 0.5840 153 7 -10.64 -0.5435 MIMAT0000665 mmu-miR-223 70127 Dpf3 accccauaaACUGUUUGACUGu |||: ||||||| gcaccagcaUGAU-AACUGACa 2 14 1322 1342 [mm9:12:84315386-84315406:-] 0.6278 147 7 -14.63 -0.8745 MIMAT0000669 mmu-miR-221 70127 Dpf3 cuuugggUCGUCUG--UUACAUCGa || |||| ||||||| gguuagaAG-AGACUGUAUGUAGCu 2 17 944 967 [mm9:12:84315761-84315784:-] 0.5607 145 7 -19.07 -0.5725 MIMAT0000670 mmu-miR-222 70127 Dpf3 ugggUCAUCGGUCUACAUCGa || : |:: ||||||| uagaAGAGACUGUAUGUAGCu 2 18 947 967 [mm9:12:84315761-84315781:-] 0.5607 149 7 -14.62 -0.5688 MIMAT0000673 mmu-miR-181b 70127 Dpf3 ugGGUGGCUGUCGUUACU-UACAa ||| :||| || ||| |||| ugCCAAUGAC--CACUGAGAUGUg 2 22 1047 1068 [mm9:12:84315660-84315681:-] 0.5607 126 0 -14.00 -0.4102 MIMAT0000704 mmu-miR-361 70127 Dpf3 caUGGGGACCUCUAAGACUAUu |:: :| || |||||||| ucAUUGUUCUAG-UUCUGAUAu 2 21 53 73 [mm9:12:84370339-84370359:-] 0.5860 150 7 -11.79 -1.1811 MIMAT0000711 mmu-miR-365 70127 Dpf3 uauuccuaaaaaucCCCGUAAu ||||||| augaaagacaacuuGGGCAUUu 2 9 84 105 [mm9:12:84370307-84370328:-] 0.5816 140 7 -10.25 -0.8964 MIMAT0000747 mmu-miR-382 70127 Dpf3 gcuuaggUGGUGCUUGUUGAAg |: | :||||||| uuuuuaaAUGAAAGACAACUUg 2 16 77 98 [mm9:12:84370314-84370335:-] 0.5816 143 7 -8.88 -0.7194 MIMAT0000748 mmu-miR-383 70127 Dpf3 ucGGUGUC-AGUGGAAGACUAga :||: | || ||||||| ggUCAUUGUUCUAGUUCUGAUau 3 21 51 73 [mm9:12:84370339-84370361:-] 0.5860 131 0 -14.01 -0.1474 MIMAT0000766 mmu-miR-335-5p 70127 Dpf3 ugUAAAAAGCAAUAACG-AGAACu || | || ||:|||| ||||| gcAUCUCUCUUUGUUGCUUCUUGu 2 22 299 322 [mm9:12:84316406-84316429:-] 0.5562 141 0 -16.69 -0.2985 MIMAT0004747 mmu-miR-411 70127 Dpf3 gcAUGCGAU-AUGC-CAGA-UGAu |:| ||| |||| |||| ||| ccUGC-CUAUUACGAGUCUCACUg 2 20 495 517 [mm9:12:84316211-84316233:-] 0.5587 123 0 -17.31 -0.1462 MIMAT0001533 mmu-miR-448 70127 Dpf3 uacccuGUAGGAUGUAUACGUu | ||||::||||||| aggucuCCUCCUGUAUAUGCAc 2 17 73 94 [mm9:12:84316634-84316655:-] 0.5426 164 7 -19.89 -0.2859 MIMAT0001537 mmu-miR-429 70127 Dpf3 ugccguaauggucuGUCAUAAu ||||||| uugagaaacucuccCAGUAUUg 2 9 968 989 [mm9:12:84315739-84315760:-] 0.5607 140 7 -11.97 -0.1200 MIMAT0001542 mmu-miR-449a 70127 Dpf3 uggucgauuGUUAUGUGACGGu || |:||||||| accuugaucCACUGCACUGCCa 2 14 643 664 [mm9:12:84316064-84316085:-] 0.4788 153 7 -20.82 -0.1428 MIMAT0003172 mmu-miR-542-3p 70127 Dpf3 aaAGUCAAUAGUUAGACAGUGu ||| |:|: | ||||||| ccUCA--UGUUCA-CUGUCACa 2 21 279 297 [mm9:12:84316431-84316449:-] 0.5562 147 7 -15.23 -0.6190 MIMAT0003187 mmu-miR-20b 70127 Dpf3 gaUGGACGUGAU--ACUCGUGAAAc ||| ||: | | :||||||| cuACCAGCGGGAACUUGGCACUUUu 2 22 220 244 [mm9:12:84316484-84316508:-] 0.5441 152 7 -18.29 -0.1527 MIMAT0003893 mmu-miR-761 70127 Dpf3 acACAGUCAAAGUGGGACGACg | || ||| :||||||| gcUCUCUUCUUCCUCCUGCUGg 2 21 1787 1808 [mm9:12:84314920-84314941:-] 0.5801 156 7 -17.23 -0.2342 MIMAT0003453 mmu-miR-497 70127 Dpf3 augUUUGGUGUCACAC-GACGAc ||:|||: |||| ||||| aggAAGCCAUUUUGUGACUGCUc 2 20 328 350 [mm9:12:84316378-84316400:-] 0.5788 135 0 -20.83 -0.2628 MIMAT0003460 mmu-miR-449c 70127 Dpf3 ggucgaucGUUACGUGACGGa || ||||||||| ccuugaucCACUGCACUGCCa 2 14 644 664 [mm9:12:84316064-84316084:-] 0.4788 157 7 -18.26 -0.1428 MIMAT0003475 mmu-miR-146b 70127 Dpf3 ucgGAUACC--U--UAAG-UCAAGAgu || ||| | :||| |||||| ugaCUCUGGUCAUUGUUCUAGUUCUga 3 20 44 70 [mm9:12:84370342-84370368:-] 0.5860 128 0 -15.38 -0.2724 MIMAT0004828 mmu-miR-708 70127 Dpf3 gggucGAUCUAACAUUCGAGGAa :||| | || ||||||| uauuuUUAG-UCGUCAGCUCCUg 2 19 1466 1487 [mm9:12:84315241-84315262:-] 0.6278 156 7 -15.22 -0.1530 MIMAT0004324 mmu-miR-181d 70127 Dpf3 ugGGUGGCUGUUGUUACU-UACAa ||| :||| || ||| |||| ugCCAAUGAC--CACUGAGAUGUg 2 22 1047 1068 [mm9:12:84315660-84315681:-] 0.5607 126 0 -14.00 -0.4071 MIMAT0004855 mmu-miR-876-3p 70127 Dpf3 acuUAAUGA--AACAUUUGGUGAu :| ||| | | ||||||| uuuGUGACUGCUCAUCAACCACUc 2 20 338 361 [mm9:12:84316367-84316390:-] 0.6014 146 7 -11.13 -0.1344 MIMAT0004899 mmu-miR-92b 70127 Dpf3 ccuccGGCCCUG-CUCA-CGUUAu ::| ||| |:|| ||||| auuacUUGUGACUGGGUGGCAAUg 2 18 1130 1153 [mm9:12:84315575-84315598:-] 0.5879 120 0 -16.87 -0.1312 MIMAT0005447 mmu-miR-449b 70127 Dpf3 cggucgauUGUUGUGACGGa || :||||||| cuugauccACUGCACUGCCa 2 13 645 664 [mm9:12:84316064-84316083:-] 0.4788 148 7 -17.01 -0.1414 MIMAT0004936 mmu-miR-873 70127 Dpf3 ucCUCUGA--GUGUUCAAG-GACg || ||| | || |||| ||| ugGAAACUUCCUCAUGUUCACUGu 2 20 270 293 [mm9:12:84316435-84316458:-] 0.5562 122 0 -16.04 -0.1337

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G067478 G071611 Dpf3 Mus musculus 70127

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Dpf3 mmu-miR-199a-3p beg:183 end:199 pic:3' ATTGGTTACACGTC--TGATGACA 5'& ||| ||||||| &5' ----------GCACACACTACTG- 3' Dpf3 mmu-miR-199b beg:183 end:199 pic:3' ATTGGTTACACGTC--TGATGACA 5'& ||| ||||||| &5' ----------GCACACACTACTG- 3' Dpf3 mmu-miR-466k beg:177 end:194 pic:3' AGTGTACATGTACATGTGTGTGT 5'& ||| .||||||| &5' --------ACAGAAGCACACAC- 3' Dpf3 mmu-miR-705 beg:121 end:140 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& .|| ..| |||||||| &5' --TCC-TTCTGCCTCCCAC- 3' Dpf3 mmu-miR-365 beg:95 end:105 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& ||||||| &5' --------------GGGCATT- 3' Dpf3 mcmv-miR-M23-1-3p beg:200 end:219 pic:3' CCGGAGCCCGGCTGCGTCCTC 5'& || ||| || |||||| &5' --CCA-GGGAAGA-GCAGGA- 3' Dpf3 mmu-let-7a beg:122 end:136 pic:3' TTGATATGTTGGATGATGGAGT 5'& ||| ||.|||| &5' ----------CCTTCTGCCTC- 3' Dpf3 mmu-let-7b beg:115 end:136 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .|| ||| ||.|||| &5' -GCCTTTT--CCTTCTGCCTC- 3' Dpf3 mmu-let-7c beg:115 end:136 pic:3' TTGGTATGTTGGATGATGGAGT 5'& .|| ||| ||.|||| &5' -GCCTTTT--CCTTCTGCCTC- 3' Dpf3 mmu-let-7d beg:114 end:136 pic:3' TTGATACGTT---GGATGATGGAGA 5'& ||| ||| ||.|||| &5' -----TGCCTTTTCCTTCTGCCTC- 3' Dpf3 mmu-let-7e beg:114 end:136 pic:3' TTGATATGTT---GGAGGATGGAGT 5'& |.| |||.||.|||| &5' -----TGCCTTTTCCTTCTGCCTC- 3' Dpf3 mmu-let-7f beg:123 end:136 pic:3' TTGATATGTTAGATGATGGAGT 5'& || ||.|||| &5' -----------CTTCTGCCTC- 3' Dpf3 mmu-let-7g beg:123 end:136 pic:3' TTGACATGTTTGATGATGGAGT 5'& || ||.|||| &5' -----------CTTCTGCCTC- 3' Dpf3 mmu-let-7i beg:123 end:136 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& || ||.|||| &5' -----------CTTCTGCCTC- 3' Dpf3 mmu-miR-1186b beg:97 end:117 pic:3' CACCACGTAC-GGAAATTAGGGT 5'& || |||| || |||||||. &5' --GG-GCATTTCCCTTAATCCT- 3' Dpf3 mmu-miR-145star beg:195 end:210 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .|||| |||||.| &5' -GAGAA--------CCAGGGA- 3' Dpf3 mmu-miR-1839-5p beg:115 end:135 pic:3' GTTCTGGACAAGATAGATGGAA 5'& .||| ||| |||.||| &5' ----GCCTTTTCCTTCTGCCT- 3' Dpf3 mmu-miR-1904 beg:200 end:220 pic:3' GGAGGGAGGTCTC--CTCGTCTTG 5'& ||||.| ||||||.|. &5' -------CCAGGGAAGAGCAGGAT 3' Dpf3 mmu-miR-1935 beg:113 end:135 pic:3' TCTCTAGGCGGTC---GGAGACGGA 5'& ..||| |.||||||| &5' ------TTGCCTTTTCCTTCTGCCT 3' Dpf3 mmu-miR-1961 beg:118 end:136 pic:3' AAGATTGATGATGGAGT 5'& |.| || ||.|||| &5' -TTTTCCTTCTGCCTC- 3' Dpf3 mmu-miR-1966 beg:143 end:166 pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& ||| ||| |.||||.|||| &5' ----CTC-CCTCTCCTAGCTTCCTT 3' Dpf3 mmu-miR-218 beg:171 end:191 pic:3' TGTACCAATCTAG-TTCGTGTT 5'& ||| ||||||| &5' ----GGTACAACAGAAGCACA- 3' Dpf3 mmu-miR-26bstar beg:193 end:218 pic:3' CTCGGTTCATTA--CC-TCTTGTCC 5'& | || || |||.|||| &5' ---CTGAGAACCAGGGAAGAGCAGG 3' Dpf3 mmu-miR-292-3p beg:90 end:106 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& |||.|| ||||.|| &5' --------AACTTG--GGCATTT- 3' Dpf3 mmu-miR-294star beg:160 end:177 pic:3' TCTATCCCGGAGGTAAAACTCA 5'& |.||.||||||.|| &5' --------CTTCTATTTTGGGT 3' Dpf3 mmu-miR-3099 beg:140 end:162 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& .||| |||||| |||||.| &5' -TCCCTCCCTCTC-CTAGCTT- 3' Dpf3 mmu-miR-30astar beg:183 end:202 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||| ||| |. |||||.| &5' ---GCACACA-CT-ACTGAGA- 3' Dpf3 mmu-miR-30c-1star beg:137 end:159 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& ||. | ||||||||.|| &5' ---GTGTCCCTCCCTCTCCTAG 3' Dpf3 mmu-miR-30c-2star beg:137 end:159 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ||. | || |||||.|| &5' ---GTGTCCCTCCCTCTCCTAG 3' Dpf3 mmu-miR-361 beg:54 end:73 pic:3' CATGGGGACCTCTAAGACTATT 5'& |. |. || |||||||| &5' -TGTTCT---AG-TTCTGATA- 3' Dpf3 mmu-miR-431 beg:204 end:220 pic:3' ACGTACTGCCGGA-CGTTCTGT 5'& || |||.||. &5' --------GGAAGAGCAGGAT- 3' Dpf3 mmu-miR-470 beg:188 end:210 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |||.| || |||.|.| &5' ---CACTACTGAGAA-CCAGGGA 3' Dpf3 mmu-miR-670 beg:188 end:210 pic:3' AAGTGGTGTATG-TGAGTCCCTA 5'& |||.|| || |||||| &5' --CACTACTGAGAAC-CAGGGA- 3' Dpf3 mmu-miR-705 beg:138 end:160 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& ||.|| .||| .||||.| | &5' TGTCCCTCCC-TCTCCTAGC 3' Dpf3 mmu-miR-708star beg:48 end:67 pic:3' GATCTTCGAGTGTC-AGATCAAC 5'& | |||. | ||||||| &5' ------GGTCATTGTTCTAGTT- 3' Dpf3 mmu-miR-709 beg:116 end:137 pic:3' AGGAGGACGGAGACGGAGG 5'& |||..| |.||||||||| &5' -CCTTTTCCTTCTGCCTCC 3' Dpf3 mmu-miR-98 beg:123 end:136 pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||| ||.|||| &5' ----------CTT-CTGCCTC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dpf3 RAID00014862 mmu-miR-28a-5p miRNA MIMAT0000653 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00043772 mmu-miR-493-3p miRNA MIMAT0004888 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00176154 mmu-miR-34b-5p miRNA MIMAT0000382 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00182478 mmu-miR-34a-5p miRNA MIMAT0000542 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00364676 mmu-miR-346-5p miRNA MIMAT0000597 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00382890 mmu-miR-449a-5p miRNA MIMAT0001542 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00483203 mmu-miR-708-5p miRNA MIMAT0004828 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00541660 mmu-miR-181d-5p miRNA MIMAT0004324 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00599942 mmu-miR-383-5p miRNA MIMAT0000748 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00684409 mmu-miR-221-3p miRNA MIMAT0000669 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00698332 mmu-miR-7021-3p miRNA MIMAT0027947 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00799688 mmu-miR-15a-5p miRNA MIMAT0000526 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00871901 mmu-miR-218-5p miRNA MIMAT0000663 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00876711 mmu-miR-7a-2-3p miRNA MIMAT0017070 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00896438 mmu-miR-182-5p miRNA MIMAT0000211 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID00907423 mmu-miR-20b-5p miRNA MIMAT0003187 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01050922 mmu-miR-146a-5p miRNA MIMAT0000158 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01087917 mmu-miR-7049-5p miRNA MIMAT0028002 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01104505 mmu-miR-3074-1-3p miRNA MIMAT0014857 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01105048 mmu-miR-222-3p miRNA MIMAT0000670 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01128640 mmu-miR-93-5p miRNA MIMAT0000540 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01225384 mmu-miR-497a-5p miRNA MIMAT0003453 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01335418 mmu-miR-7094-3p miRNA MIMAT0028095 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01377904 mmu-miR-542-3p miRNA MIMAT0003172 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01466387 mmu-miR-7234-5p miRNA MIMAT0028436 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01541348 mmu-miR-7010-3p miRNA MIMAT0027925 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01641992 mmu-miR-449c-5p miRNA MIMAT0003460 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01748273 mmu-miR-181b-5p miRNA MIMAT0000673 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01765227 mmu-miR-6992-5p miRNA MIMAT0027886 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01797707 mmu-miR-92b-3p miRNA MIMAT0004899 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01817463 mmu-miR-200c-3p miRNA MIMAT0000657 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01824692 mmu-miR-7045-3p miRNA MIMAT0027995 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID01839160 mmu-miR-20a-5p miRNA MIMAT0000529 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02022291 mmu-miR-140-5p miRNA MIMAT0000151 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02053135 mmu-miR-7232-5p miRNA MIMAT0028432 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02109171 mmu-miR-142a-3p miRNA MIMAT0000155 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02179292 mmu-miR-3085-3p miRNA MIMAT0014879 Dpf3 mRNA 70127 Prediction 0.2202 Dpf3 RAID02311933 mmu-miR-361-5p miRNA MIMAT0000704 Dpf3 mRNA 70127 Prediction 0.2202 Dpf3 RAID02364615 mmu-miR-761 miRNA MIMAT0003893 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02391129 mmu-miR-106a-5p miRNA MIMAT0000385 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02392007 mmu-miR-448-3p miRNA MIMAT0001533 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02572905 mmu-miR-3064-5p miRNA MIMAT0014834 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02644235 mmu-miR-125a-3p miRNA MIMAT0004528 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02748638 mmu-miR-135b-5p miRNA MIMAT0000612 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02944708 mmu-miR-214-3p miRNA MIMAT0000661 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02962034 mmu-miR-138-5p miRNA MIMAT0000150 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02964617 mmu-miR-200b-3p miRNA MIMAT0000233 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02990155 mmu-miR-17-5p miRNA MIMAT0000649 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID02990986 mmu-miR-365-3p miRNA MIMAT0000711 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03056419 mmu-miR-223-3p miRNA MIMAT0000665 Dpf3 mRNA 70127 Prediction 0.2202 Dpf3 RAID03071690 mmu-miR-195a-5p miRNA MIMAT0000225 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03126284 mmu-miR-146b-5p miRNA MIMAT0003475 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03176564 mmu-miR-6971-5p miRNA MIMAT0027844 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03249720 mmu-miR-16-5p miRNA MIMAT0000527 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03266366 mmu-miR-709 miRNA MIMAT0003499 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03335193 mmu-miR-429-3p miRNA MIMAT0001537 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03353047 mmu-miR-6385 miRNA MIMAT0025131 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03443768 mmu-miR-335-5p miRNA MIMAT0000766 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03451112 mmu-miR-135a-5p miRNA MIMAT0000147 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03498256 mmu-miR-876-3p miRNA MIMAT0004855 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03508634 mmu-miR-449b miRNA MIMAT0005447 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03512498 mmu-miR-106b-5p miRNA MIMAT0000386 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03525578 mmu-miR-382-5p miRNA MIMAT0000747 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03534706 mmu-miR-15b-5p miRNA MIMAT0000124 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03591987 mmu-miR-7041-3p miRNA MIMAT0027987 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03603742 mmu-miR-6916-5p miRNA MIMAT0027732 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03656830 mmu-miR-6979-5p miRNA MIMAT0027860 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03686012 mmu-miR-411-5p miRNA MIMAT0004747 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03937399 mmu-miR-7119-5p miRNA MIMAT0028135 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID03969693 mmu-miR-5621-5p miRNA MIMAT0022369 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID04038347 mmu-miR-34c-5p miRNA MIMAT0000381 Dpf3 mRNA 70127 Prediction 0.1828 Dpf3 RAID04038622 mmu-miR-873a-5p miRNA MIMAT0004936 Dpf3 mRNA 70127 Prediction 0.1828