DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Trim27 | mmu-miR-878-5p | beg:206 | end:225 | pic:3' ACAGAACTGTAGG-TTGATCTAT 5'& || || |||||||| &5' ------GAAATAAAAACTAGAT- 3' |
Trim27 | mmu-miR-335-3p | beg:175 | end:194 | pic:3' CCAGTCCTCGTTATTACTTTTT 5'& ||| .|||||||||. &5' ------GAGATGTAATGAAAAG 3' |
Trim27 | mmu-miR-1931 | beg:157 | end:172 | pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& || |||||||| &5' ---------CCTTCCCTTGCA- 3' |
Trim27 | mmu-miR-1186b | beg:20 | end:43 | pic:3' CACCACGT--ACGGAAATTAGGGT 5'& |||| ||||| ||||||.| &5' ---GTGCTGTTGCCTGTAATCCTA 3' |
Trim27 | mmu-miR-1224 | beg:147 | end:171 | pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& || ||..|.||| ||| | &5' CTGCATTTTCCCTTCCCTTGC 3' |
Trim27 | mmu-miR-129-5p | beg:195 | end:219 | pic:3' CGTTC--GGGTCTGGCGTTTTTC 5'& || |||||| .||||| &5' GCTATTTCCCAGAAA-TAAAAA- 3' |
Trim27 | mmu-miR-15a | beg:9 | end:31 | pic:3' GTGTTTGGTAATACACGACGAT 5'& .|.|||| ||||||.|. &5' --TAGACCACAA-GTGCTGTTG 3' |
Trim27 | mmu-miR-16 | beg:11 | end:31 | pic:3' GC-GGTTATAAATGCACGACGAT 5'& | ||| ||||||.|. &5' -GACCACAA-----GTGCTGTTG 3' |
Trim27 | mmu-miR-1894-3p | beg:147 | end:171 | pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& || | ||. |||| |||||||| &5' CTGCATTTTCCCT-TCCCTTGC 3' |
Trim27 | mmu-miR-195 | beg:19 | end:31 | pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||.|. &5' ------------GTGCTGTTG 3' |
Trim27 | mmu-miR-200astar | beg:162 | end:184 | pic:3' AGGT-CGTGACAGGCCATTCTAC 5'& || ||| ||.||||| &5' -CCTTGCAGATT---GTGAGATG 3' |
Trim27 | mmu-miR-200bstar | beg:162 | end:183 | pic:3' AGGTTACGACGGGTCATTCTAC 5'& ||| ||| | ||.||||| &5' TCCCTTGCAGATT-GTGAGATG 3' |
Trim27 | mmu-miR-2140 | beg:131 | end:152 | pic:3' TGGT-GGTTCTAGACGTGGA 5'& ||| ||| |.||| .||. &5' -CCATCCATGGTCTCTACT- 3' |
Trim27 | mmu-miR-218 | beg:43 | end:55 | pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||.|||||| &5' ------------CAGGCACAA 3' |
Trim27 | mmu-miR-21star | beg:9 | end:30 | pic:3' CTGTCGGGTAGCTGACGACAAC 5'& .|| ||| | | |||||||| &5' --TAGACCA-CAAGTGCTGTTG 3' |
Trim27 | mmu-miR-299star | beg:2 | end:18 | pic:3' TACATACACCCTGCCATTTGGT 5'& ||| || |||.|||| &5' ------GTGA-AC-GTAGACCA 3' |
Trim27 | mmu-miR-30c-1star | beg:189 | end:210 | pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||| .|. |.|||||| &5' --AGTATT--GCTATTTCCCAG 3' |
Trim27 | mmu-miR-30c-2star | beg:189 | end:210 | pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||| ||. |.|||||| &5' --AGTATT--GCTATTTCCCAG 3' |
Trim27 | mmu-miR-322 | beg:13 | end:30 | pic:3' AGGTTTTGTACTTAACGACGAC 5'& || ||| |||||.|| &5' -CC---ACAAG---TGCTGTTG 3' |
Trim27 | mmu-miR-342-3p | beg:165 | end:182 | pic:3' TGCCCACG-CTAAAGACACACTCT 5'& ||| ||| ||||||| &5' -----TGCAGAT-----TGTGAGA 3' |
Trim27 | mmu-miR-3471 | beg:42 | end:63 | pic:3' TTACGGAATGTCAA-CCTAGAGT 5'& || .|| ||||||. &5' ----CCAGGCACAAGGGATCTT- 3' |
Trim27 | mmu-miR-450a-3p | beg:190 | end:210 | pic:3' TACTTACGTTTCGT--AGGGGTTA 5'& |.| || |.||||. &5' ------GTATTGCTATTTCCCAG- 3' |
Trim27 | mmu-miR-450b-3p | beg:190 | end:210 | pic:3' TACGT-ACGTTTTACAAGGGTTA 5'& |.| ||| || ||||||. &5' --GTATTGCT--AT-TTCCCAG- 3' |
Trim27 | mmu-miR-452 | beg:153 | end:175 | pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& |.|| |||| .||||.|. &5' -TTTCCC-TTCCCTTGCAGAT- 3' |
Trim27 | mmu-miR-497 | beg:9 | end:31 | pic:3' ATGTTTGGTGTCACACGACGAC 5'& .|.|||||| ||||||.|| &5' --TAGACCACAA-GTGCTGTTG 3' |
Trim27 | mmu-miR-666-5p | beg:14 | end:36 | pic:3' CCGAGAGTGT---CGAC-ACGGGCGA 5'& |||| |||| ||||.|. &5' ------CACAAGTGCTGTTGCCTGT- 3' |
Trim27 | mmu-miR-667 | beg:85 | end:95 | pic:3' GAACCCGACCCACCGTCCACAGT 5'& .|||||| &5' ---------------GGGTGTC- 3' |
Trim27 | mmu-miR-680 | beg:115 | end:136 | pic:3' GGGGGTACAGTCG----TCTACGGG 5'& || || |||||.|| &5' -------GTGAGAGACAAGATGTCC 3' |
Trim27 | mmu-miR-696 | beg:36 | end:54 | pic:3' GGGTGTCGTTCGTGTGCG 5'& ||.|| ||.||||| &5' CCTACCCCAGGCACA--- 3' |
Trim27 | mmu-miR-758 | beg:2 | end:21 | pic:3' ATCACCTG-GTCCAGTGTTT 5'& |||| || .|| ||||| &5' -AGTGAACGTAGACCACAA- 3' |