Asb14
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004522mmu-miR-27b*142687Asb14caagugguuagucGAUUCGAGa |||||||| -------------CUAAGCUCg21019[mm9:14:27728337-27728345:+]0.59291457-10.44-0.1668
MIMAT0000706mmu-miR-362-5p142687Asb14uaaGUGUGGAUCCAAGGUUCC-UAa | |::|||| ||||| || aagCUCGUCUAGAGGGCAAGGUAUa222327[mm9:14:27728339-27728363:+]0.55471210-17.95-0.6391
MIMAT0001637mmu-miR-452142687Asb14caGAGUCA-AAGGAG--ACGUUUGu |||||| :||| ||||||| uaCUCAGUAAAUCUCAGUGCAAAC-22182105[mm9:14:27728418-27728441:+]0.51111587-21.11-0.8814
MIMAT0004823mmu-miR-666-3p142687Asb14ucgUCCGCUAGUGCGACGUCGg |||: || |: ||||||| gcaAGGU-AUAAU-CUGCAGCa2201837[mm9:14:27728354-27728373:+]0.51661517-17.84-0.7149
MIMAT0003740mmu-miR-674142687Asb14auGUGGUGAG---GGUAGAGUCACg | ::|||| ||||||||| uaCUUUACUCAGUAAAUCUCAGUGc22177101[mm9:14:27728413-27728437:+]0.51111517-26.75-1.0908
MIMAT0003493mmu-miR-703142687Asb14aaGAAAGGAAGACUUCCAAaa ||| : |: |||||| caCUUCUGAUUAAAAGGUUga3202444[mm9:14:27727581-27727601:+]0.50941270-13.71-0.3704
MIMAT0003504mmu-miR-713142687Asb14cgacacacggaAGUCACGu ||||||| cucaguaaaucUCAGUGCa2984102[mm9:14:27728420-27728438:+]0.51111407-14.30-0.8937
MIMAT0003508mmu-miR-501-5p142687Asb14aaAGUGGGUCCCUGUUUCCUAa |::|:: | ::||||||| acUUGCUU-GUUGUAAAGGAUu2214969[mm9:14:27728385-27728405:+]0.51751467-11.64-0.8536
MIMAT0003511mmu-miR-450b-5p142687Asb14auaAGUCCUU--GUAUGACGUUUu |||| || | | |||||| uacUCAGUAAAUCUCAGUGCAAAc22082105[mm9:14:27728418-27728441:+]0.51111266-7.99-0.1017
MIMAT0004850mmu-miR-883b-5p142687Asb14acUGACGAUGGGU-A---AGAGUCAu ||| :|||:|| | ||||||| uuACU-UUACUCAGUAAAUCUCAGUg22176100[mm9:14:27728412-27728436:+]0.51111527-20.36-0.9035
MIMAT0004885mmu-miR-467c142687Asb14gugUAUAUGUACGUG-CGUGAAu :|||| || ::| |||||| aagGUAUA-AUCUGCAGCACUUu2202041[mm9:14:27728356-27728377:+]0.51661256-15.80-0.5931
MIMAT0004886mmu-miR-467d142687Asb14gcgUAUAUGUACGCG-CGUGAAu :|||| || :|| |||||| aagGUAUA-AUCUGCAGCACUUu2202041[mm9:14:27728356-27728377:+]0.51661296-14.88-0.5931
MIMAT0005836mmu-miR-1186142687Asb14guacggAAAUUA-AGGUCGUGAg | |||| | ||||||| gcaaggUAUAAUCUGCAGCACUu2171840[mm9:14:27728354-27728376:+]0.51661557-13.76-0.7834
MIMAT0005860mmu-miR-1199142687Asb14ggcgcgcuggcccUGAGUCu |||||| uuuucuuuacuuuACUCAGu287089[mm9:14:27728406-27728425:+]0.51751206-12.76-0.1011
MIMAT0009425mmu-miR-1954142687Asb14uuGUCCCAGAGUGAGACGUCa || ||| | | ||||||| ggCAAGGUAU-AAUCUGCAGc2201736[mm9:14:27728353-27728372:+]0.51661577-17.75-0.5133
MIMAT0000368mmu-miR-291a-3p142687Asb14cgUGUGUUUCACCUUCGUGAAa ::|:|| | | ||||||| agGUAUAAUCU-GCAGCACUUu2212141[mm9:14:27728357-27728377:+]0.51661507-12.86-0.4888
MIMAT0000372mmu-miR-294142687Asb14uguguguUUUCCCUUCGUGAAa || | ||||||| aagguauAAUCUGCAGCACUUu2162041[mm9:14:27728356-27728377:+]0.51661437-11.57-0.4853
MIMAT0000373mmu-miR-295142687Asb14ucugaGUUUUCAUCAUCGUGAAa :| || | ||||||| caaggUAUAAUCUGCAGCACUUu2191941[mm9:14:27728355-27728377:+]0.51661467-11.90-0.4888
MIMAT0000380mmu-miR-302a142687Asb14agugGUUUUGUACCUUCGUGAAu :| ||: | | ||||||| aaggUAUAAUCU-GCAGCACUUu2202041[mm9:14:27728356-27728377:+]0.51661497-11.75-0.4888
MIMAT0000385mmu-miR-106a142687Asb14gauggacguGACAAUCGUGAAAc ||| |||||||| agguauaauCUG-CAGCACUUUc2152142[mm9:14:27728357-27728378:+]0.51661487-15.49-0.7135
MIMAT0000386mmu-miR-106b142687Asb14uagacguGACAGUCGUGAAAu ||| ||||||||| guauaauCUG-CAGCACUUUc2152342[mm9:14:27728359-27728378:+]0.51661567-16.30-0.7135
MIMAT0000529mmu-miR-20a142687Asb14gauggACGUGAUAU-UCGUGAAAu | :| | |: |||||||| caaggUAUAAUCUGCAGCACUUUc2191942[mm9:14:27728355-27728378:+]0.51661497-15.61-0.7172
MIMAT0000540mmu-miR-93142687Asb14gauggacgugcuUGUCGUGAAAc :||||||||| aagguauaaucuGCAGCACUUUc2122042[mm9:14:27728356-27728378:+]0.51661517-15.81-0.7209
MIMAT0000567mmu-miR-329142687Asb14uuuuuccaaucgaccCACACAa |||||| ---------------GUGUGUu2817[mm9:14:27727558-27727564:+]0.48201206-7.47-0.1676
MIMAT0000649mmu-miR-17142687Asb14gauggACGUGACAU-UCGUGAAAc | :| | |: |||||||| caaggUAUAAUCUGCAGCACUUUc2191942[mm9:14:27728355-27728378:+]0.51661497-15.49-0.7135
MIMAT0004684mmu-miR-362-3p142687Asb14acuuaggaacuugucCACACAa |||||| ---------------GUGUGUu2817[mm9:14:27727558-27727564:+]0.48201206-7.47-0.1676
MIMAT0000747mmu-miR-382142687Asb14gcUUAG--GUGGUG-----CUUGUUGAAg |||| || ||| |||||||| auAAUCUGCAGCACUUUCUUAACAACUUg2212553[mm9:14:27728361-27728389:+]0.51701467-11.90-0.8794
MIMAT0003187mmu-miR-20b142687Asb14gauggACGUGAUAC-UCGUGAAAc | :| | || |||||||| caaggUAUAAUCUGCAGCACUUUc2191942[mm9:14:27728355-27728378:+]0.51661537-15.49-0.7172
MIMAT0003374mmu-miR-302b142687Asb14gaugAUUUUGUACCUUCGUGAAu || ||: | | ||||||| aaggUAUAAUCU-GCAGCACUUu2202041[mm9:14:27728356-27728377:+]0.51661537-10.05-0.4888
MIMAT0003377mmu-miR-302d142687Asb14ugugaguUUGUACCUUCGUGAAu ||: | | ||||||| aagguauAAUCU-GCAGCACUUu2172041[mm9:14:27728356-27728377:+]0.51661467-9.35-0.4888
MIMAT0003513mmu-miR-505142687Asb14ucuuuuggucguucaCAACUGc |||||| acuucugauuaaaagGUUGAC-282545[mm9:14:27727582-27727602:+]0.50941206-9.81-0.5034
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G063902Asb14Mus musculus142687
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Asb14mmu-miR-666-3pbeg:18end:37pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& |||. |. ||||||| &5' ---AGGTATA-AT-CTGCAGC- 3'
Asb14mmu-miR-106abeg:25end:42pic:3' GATGGACGTGACAATCGTGAAAC 5'& |.|||| |||||||| &5' --ATCTGC------AGCACTTT- 3'
Asb14mmu-miR-17beg:25end:42pic:3' GATGGACGTGACATTCGTGAAAC 5'& |.|||| |||||||| &5' --ATCTGC------AGCACTTT- 3'
Asb14mmu-miR-20abeg:25end:42pic:3' GATGGACGTGATATTCGTGAAAT 5'& |.|||| |||||||| &5' --ATCTGC------AGCACTTT- 3'
Asb14mmu-miR-20bbeg:25end:42pic:3' GATGGACGTGATACTCGTGAAAC 5'& |.|||| |||||||| &5' --ATCTGC------AGCACTTT- 3'
Asb14mmu-miR-106bbeg:20end:42pic:3' TAGACGT----GACAGTCGTGAAAT 5'& |.| ||| ||||||||| &5' ----GTATAATCTG-CAGCACTTT- 3'
Asb14mmu-miR-1186beg:20end:41pic:3' GTACGGAAATTA-AGGTCGTGAG 5'& |. |||| | |||||||. &5' ---GTA--TAATCTGCAGCACTT 3'
Asb14mmu-miR-154beg:12end:33pic:3' GCTTCCGTTGTGCC-TATTGGAT 5'& ||.||||| || ||||.||. &5' -GAGGGCAA---GGTATAATCTG 3'
Asb14mmu-miR-18abeg:25end:42pic:3' GATAGACGTGATCTACGTGGAAT 5'& ||||||| ||||.|| &5' --ATCTGCA------GCACTTT- 3'
Asb14mmu-miR-1953beg:26end:46pic:3' GTCTTCGGAC-TCTTGAAAGGGT 5'& .||| || ||||||..| &5' ------TCTGCAGCACTTTCTTA 3'
Asb14mmu-miR-1954beg:16end:36pic:3' TTGTCCCAGAGTGAGACGTCA 5'& .|| ||| ||||||| &5' -GCAAGGTATAA-TCTGCAG- 3'
Asb14mmu-miR-2141beg:26end:44pic:3' TTGAAAAGAC--TGTGGAGGA 5'& |||| .|||.|.|| &5' ------TCTGCAGCACTTTCT 3'
Asb14mmu-miR-291a-3pbeg:21end:42pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& .|.|| || |||||||| &5' ---TATAATCTGC-AGCACTTT 3'
Asb14mmu-miR-294beg:21end:42pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& .|.|| | |||||||| &5' ---TATAATCT-GCAGCACTTT 3'
Asb14mmu-miR-33beg:85end:103pic:3' ACGTTACGTTGAT-GTTACGTG 5'& |.|| ||.|||| &5' ------GTAAATCTCAGTGCA- 3'
Asb14mmu-miR-382beg:33end:53pic:3' GCTTAGGTGGTGC--TTGTTGAAG 5'& |||. |||||||| &5' ------CACTTTCTTAACAACTT- 3'
Asb14mmu-miR-452beg:81end:104pic:3' CAGAGTCAAA-GGAG--ACGTTTGT 5'& |||||| .||| ||||||| &5' --CTCAGTAAATCTCAGTGCAAAC- 3'
Asb14mmu-miR-669gbeg:82end:103pic:3' TAGTACAGTTGTGTAT-GTTACGT 5'& |||..| ||.|||| &5' ------TCAGTAAATCTCAGTGCA 3'
Asb14mmu-miR-674beg:79end:102pic:3' ATGTGGTGAGGG---TAGAGTCACG 5'& ..|||| |||||||||| &5' ----TTACTCAGTAAATCTCAGTGC 3'
Asb14mmu-miR-713beg:85end:103pic:3' CGACACACGGAAGTCACGT 5'& || .| |||||||| &5' ---GTAAATC-TCAGTGCA 3'
Asb14mmu-miR-883a-5pbeg:71end:91pic:3' CATTGACGATGAAGAGAGTCGT 5'& || .|||||. |||||.| &5' ----CT-TTACTTTACTCAGTA 3'
Asb14mmu-miR-883b-5pbeg:75end:101pic:3' ACTGACGATGGGTA----AGAGTCAT 5'& ||| .|||.|| |||||||. &5' --ACT-TTACTCAGTAAATCTCAGTG 3'
Asb14mmu-miR-93beg:20end:42pic:3' GATGGACGTGCT---TGTCGTGAAAC 5'& |.|. .||||||||| &5' ------GTATAATCTGCAGCACTTT- 3'
Asb14mmu-miR-27bstarbeg:0end:9pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& |||||||| &5' -------------CTAAGCTC- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Asb14RAID00358362mmu-miR-666-3pmiRNAMIMAT0004823Asb14mRNA142687Prediction0.1828
Asb14RAID00506780mmu-miR-142a-5pmiRNAMIMAT0000154Asb14mRNA142687Prediction0.1828
Asb14RAID00934669mmu-miR-17-5pmiRNAMIMAT0000649Asb14mRNA142687Prediction0.1828
Asb14RAID01013143mmu-miR-294-3pmiRNAMIMAT0000372Asb14mRNA142687Prediction0.1828
Asb14RAID01041601mmu-miR-329-3pmiRNAMIMAT0000567Asb14mRNA142687Prediction0.1828
Asb14RAID01090408mmu-miR-505-3pmiRNAMIMAT0003513Asb14mRNA142687Prediction0.1828
Asb14RAID01186070mmu-miR-182-5pmiRNAMIMAT0000211Asb14mRNA142687Prediction0.1828
Asb14RAID01381836mmu-miR-93-5pmiRNAMIMAT0000540Asb14mRNA142687Prediction0.1828
Asb14RAID01478962mmu-miR-674-5pmiRNAMIMAT0003740Asb14mRNA142687Prediction0.1828
Asb14RAID01534427mmu-miR-374b-5pmiRNAMIMAT0003727Asb14mRNA142687Prediction0.1828
Asb14RAID01608957mmu-miR-362-3pmiRNAMIMAT0004684Asb14mRNA142687Prediction0.1828
Asb14RAID01638891mmu-miR-20a-5pmiRNAMIMAT0000529Asb14mRNA142687Prediction0.1828
Asb14RAID01756215mmu-miR-291a-3pmiRNAMIMAT0000368Asb14mRNA142687Prediction0.1828
Asb14RAID01988716mmu-miR-106a-5pmiRNAMIMAT0000385Asb14mRNA142687Prediction0.1828
Asb14RAID02432106mmu-miR-6343miRNAMIMAT0025086Asb14mRNA142687Prediction0.1828
Asb14RAID02627013mmu-miR-302a-3pmiRNAMIMAT0000380Asb14mRNA142687Prediction0.1828
Asb14RAID02729148mmu-miR-3473dmiRNAMIMAT0020632Asb14mRNA142687Prediction0.1828
Asb14RAID02953826mmu-miR-295-3pmiRNAMIMAT0000373Asb14mRNA142687Prediction0.1828
Asb14RAID03190906mmu-miR-382-5pmiRNAMIMAT0000747Asb14mRNA142687Prediction0.1828
Asb14RAID03302529mmu-miR-369-3pmiRNAMIMAT0003186Asb14mRNA142687Prediction0.1828
Asb14RAID03357891mmu-miR-302b-3pmiRNAMIMAT0003374Asb14mRNA142687Prediction0.1828
Asb14RAID03781545mmu-miR-302d-3pmiRNAMIMAT0003377Asb14mRNA142687Prediction0.1828
Asb14RAID03787246mmu-miR-20b-5pmiRNAMIMAT0003187Asb14mRNA142687Prediction0.1828
Asb14RAID03932133mmu-miR-106b-5pmiRNAMIMAT0000386Asb14mRNA142687Prediction0.1828
Asb14RAID03971652mmu-miR-1947-3pmiRNAMIMAT0017343Asb14mRNA142687Prediction0.1828