DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 50933 Uchl3 auuUGGUGGUAUACUU-UGGUCg || | |:||| || ||||| aucACAAACGUAUUAACACCAGu 2 20 487 509 [mm9:14:102066868-102066890:+] 0.5641 131 0 -14.96 -1.2010 MIMAT0000129 mmu-miR-30a* 50933 Uchl3 cgACGUUUGUAGGCUGACUUUc ||| |:| |: ||| ||| gaUGC-CAUAACUAACUCAAAa 2 21 55 75 [mm9:14:102095257-102095277:+] 0.6260 122 0 -4.94 -0.2708 MIMAT0004526 mmu-miR-101a* 50933 Uchl3 cgUAGUCGUGACACUAUUGAcu ||: :: || |||||| aaAUUUCUGAUGCCAUAACUaa 3 21 47 68 [mm9:14:102095249-102095270:+] 0.6260 128 0 -6.45 -0.1638 MIMAT0004526 mmu-miR-101a* 50933 Uchl3 cguaGUCGUGAC--ACUAUUGAcu :| :|||| | |||||| acugUAAUACUGUUUUAUAACUug 3 19 451 474 [mm9:14:102066832-102066855:+] 0.5489 133 0 -11.95 -0.1210 MIMAT0000143 mmu-miR-9* 50933 Uchl3 ugaaagccaauagauCGAAAUa |||||| caaacuauuuuaguuGCUUUAa 2 8 263 284 [mm9:14:102066644-102066665:+] 0.4960 120 6 -5.55 -0.1658 MIMAT0000154 mmu-miR-142-5p 50933 Uchl3 ucaucacgaAAGAUGAAAUAc || ||||||| cuugacuaaUUAAACUUUAUg 2 13 95 115 [mm9:14:102095297-102095317:+] 0.6388 144 7 -8.85 -1.2693 MIMAT0004537 mmu-miR-154* 50933 Uchl3 uuauccaguuggcaCAUACUAa ||||||| cuuugaacuuagaaGUAUGAUg 2 9 212 233 [mm9:14:102066593-102066614:+] 0.5181 140 7 -7.68 -0.8645 MIMAT0000230 mmu-miR-199a-3p 50933 Uchl3 auugguuaCACGUCUGAUGAca || : |||||| auuuucucGUUUUCACUACUua 3 15 601 622 [mm9:14:102066982-102067003:+] 0.5403 122 0 -5.24 -0.1933 MIMAT0000234 mmu-miR-201 50933 Uchl3 uucuuguuacggaauGACUCAu |||||| aaaauuacuacaagcCUGAGUa 2 8 622 643 [mm9:14:102067003-102067024:+] 0.5165 120 6 -13.24 -0.1475 MIMAT0000367 mmu-miR-291a-5p 50933 Uchl3 ucucucccGGAGGUGAAACUAc ::|::| |||||| gguuuuuuUUUUUAAUUUGAUc 2 15 427 448 [mm9:14:102066808-102066829:+] 0.5489 122 6 -6.51 -0.1275 MIMAT0004573 mmu-miR-293* 50933 Uchl3 guuUUACAGUGUGUCAAACUca |:| |::| |||||| ucuAGUAAAAUGCUGUUUGAaa 3 20 572 593 [mm9:14:102066953-102066974:+] 0.5641 131 0 -8.47 -0.1255 MIMAT0004574 mmu-miR-294* 50933 Uchl3 ucuaucccggagguAAAACUca |||||| uaaacauucaugauUUUUGAaa 3 9 134 155 [mm9:14:102066515-102066536:+] 0.5181 120 0 -5.41 -0.1835 MIMAT0004575 mmu-miR-295* 50933 Uchl3 cuUCACACGGGGUGUAAACUca ||| | : :|:|||||| ccAGUAAG-UAUAUAUUUGAca 3 21 505 525 [mm9:14:102066886-102066906:+] 0.5641 130 0 -9.54 -0.3241 MIMAT0000378 mmu-miR-300 50933 Uchl3 cuucucucgaacGGGAACGUAu |::|||||| auacaucauccuCUUUUGCAUa 2 11 307 328 [mm9:14:102066688-102066709:+] 0.5489 130 6 -11.85 -0.1592 MIMAT0004579 mmu-miR-302a* 50933 Uchl3 cguUCAUGUUGGUGCAAAUUca ||| ::| |||||| uuuAGUUGCUUUAAGUUUAAaa 3 20 271 292 [mm9:14:102066652-102066673:+] 0.4960 127 0 -7.37 -0.2275 MIMAT0004620 mmu-let-7a* 50933 Uchl3 ccUUUCUGUCAUCUAACAUAUc || :| | |||||||| ugAAUAGCUUUCCAUUGUAUAg 2 21 542 563 [mm9:14:102066923-102066944:+] 0.5641 148 7 -11.60 -0.8920 MIMAT0004621 mmu-let-7b* 50933 Uchl3 ccCUU-CCGUCAUCCAACAUAUc ||| || | ||||||| cuGAAUAGCUUUCCAUUGUAUAg 2 21 541 563 [mm9:14:102066922-102066944:+] 0.5641 143 7 -10.05 -0.8852 MIMAT0005439 mmu-let-7c-2* 50933 Uchl3 ccUUUCUGUCAUCUAACAUAUc || :| | |||||||| ugAAUAGCUUUCCAUUGUAUAg 2 21 542 563 [mm9:14:102066923-102066944:+] 0.5641 148 7 -11.60 -0.8920 MIMAT0004623 mmu-let-7f* 50933 Uchl3 ccCUU-CCGUUAUCUAACAUAUc ||| || | |||||||| cuGAAUAGCUUUCCAUUGUAUAg 2 21 541 563 [mm9:14:102066922-102066944:+] 0.5641 151 7 -11.95 -0.8852 MIMAT0004625 mmu-miR-16* 50933 Uchl3 agucGUC-GUGUCAGUUAUGACc ||| ||| ||||||| uugaCAGAAACACCAAAUACUGu 2 19 5 27 [mm9:14:102095207-102095229:+] 0.6131 149 7 -14.78 -1.0915 MIMAT0004625 mmu-miR-16* 50933 Uchl3 agucgUCGUGUCA-GUUAUGACc | |||| | :||||||| auuugAUCACACUGUAAUACUGu 2 18 441 463 [mm9:14:102066822-102066844:+] 0.5489 156 7 -13.72 -1.1220 MIMAT0004625 mmu-miR-16* 50933 Uchl3 agucguCGUGU-CAGUUAUGACc |:||| |::|||||| uaugauGUACAUUUUGAUACUGu 2 17 227 249 [mm9:14:102066608-102066630:+] 0.5303 139 6 -10.07 -0.1073 MIMAT0004625 mmu-miR-16* 50933 Uchl3 agUCGUCGUGUCAG-UUAU-GACc ||| |:|| || |||| ||| ggAGCUGUAC-CUCAAAUAUCUGu 2 21 54 76 [mm9:14:102066435-102066457:+] 0.5319 121 0 -12.39 -0.7310 MIMAT0004628 mmu-miR-21* 50933 Uchl3 cuGUCGGGUAGCUGACGACAAc :| |: :| | ||||||| uuUAUCUAGUAAAAUGCUGUUu 2 21 568 589 [mm9:14:102066949-102066970:+] 0.5641 148 7 -11.58 -1.1425 MIMAT0000544 mmu-miR-129-3p 50933 Uchl3 uacgaaaaacccCAUUCCCGAa | ||||||| ucuuauccguaaGAAAGGGCUu 2 11 19 40 [mm9:14:102066400-102066421:+] 0.5319 142 7 -13.34 -0.4976 MIMAT0000551 mmu-miR-323-3p 50933 Uchl3 ucuccagcUGGCACAUUACAc |:| |||||||| ccucaaauAUC-UGUAAUGUu 2 14 63 82 [mm9:14:102066444-102066463:+] 0.4958 147 7 -9.59 -0.9023 MIMAT0000569 mmu-miR-330* 50933 Uchl3 agagacguccgggacACGAAAcg |||||| ccaaacuauuuuaguUGCUUUaa 3 9 262 284 [mm9:14:102066643-102066665:+] 0.4960 120 0 -5.54 -0.1576 MIMAT0004659 mmu-miR-10a* 50933 Uchl3 auaaggggaucuaugCUUAAAc |||||| guuuaaaaauauuugGAAUUUu 2 8 285 306 [mm9:14:102066666-102066687:+] 0.5224 120 6 -2.81 -0.1742 MIMAT0004660 mmu-miR-19a* 50933 Uchl3 caucacGUUGA-UACGUUUUGAu :|||| | |||||:| augccaUAACUAACUCAAAAUUu 2 17 56 78 [mm9:14:102095258-102095280:+] 0.6260 135 0 -9.76 -0.1757 MIMAT0004661 mmu-miR-28* 50933 Uchl3 aggucGUCGAGU-GUUAGAUCAc :||: :| : ||||||| uuguaUAGUAUAUUUAUCUAGUa 2 18 556 578 [mm9:14:102066937-102066959:+] 0.5641 144 7 -11.22 -1.2858 MIMAT0005444 mmu-miR-218-2* 50933 Uchl3 gcgccacgaacugUCUUGGUAc |||||||| uaaaaguaaacuaAGAACCAUg 2 10 327 348 [mm9:14:102066708-102066729:+] 0.5489 145 7 -15.48 -0.7683 MIMAT0004666 mmu-miR-33* 50933 Uchl3 caCUACG-UGAC-ACCUUUGUAAc || |: |:|| | ||||||| uuGAAGUAAUUGUUUUAAACAUUc 2 21 119 142 [mm9:14:102066500-102066523:+] 0.5181 150 7 -9.93 -1.0486 MIMAT0004666 mmu-miR-33* 50933 Uchl3 cacUACGUGACACCUUU-GUAAc ||| :| || ||| |||| uucAUGAUUUUUGAAAAUCAUUu 2 20 140 162 [mm9:14:102066521-102066543:+] 0.5181 123 0 -7.08 -1.0257 MIMAT0000672 mmu-miR-199b* 50933 Uchl3 cuuguccAUCAGAUU--UGUGACcc || |:|:| |||||| uuuuuuuUAAUUUGAUCACACUGua 3 17 432 456 [mm9:14:102066813-102066837:+] 0.5489 131 0 -7.69 -0.1877 MIMAT0004667 mmu-miR-199b 50933 Uchl3 auugguuaCACGUCUGAUGAca || : |||||| auuuucucGUUUUCACUACUua 3 15 601 622 [mm9:14:102066982-102067003:+] 0.5403 122 0 -5.24 -0.1933 MIMAT0003387 mmu-miR-376a* 50933 Uchl3 ugaguaucuucCUCUUAGAUgg || |||||| aaaugcuguuuGA-AAUCUAag 3 12 579 599 [mm9:14:102066960-102066980:+] 0.5641 121 0 -4.58 -0.1099 MIMAT0004691 mmu-miR-382* 50933 Uchl3 uuUUUCACAACAGGCACUUAcu ||| | || | |||||| uuAAACU-UUAU--GUGAAUaa 3 21 104 122 [mm9:14:102095306-102095324:+] 0.6388 127 0 -6.57 -0.3277 MIMAT0001090 mmu-miR-409-3p 50933 Uchl3 uccccaaguggcucgUUGUAAg |||||| gaaguaauuguuuuaAACAUUc 2 8 121 142 [mm9:14:102066502-102066523:+] 0.5181 120 6 -9.97 -0.1338 MIMAT0002108 mmu-miR-467a-1* 50933 Uchl3 cacauccacacacauACAUAUa |||||| ugaauagcuuuccauUGUAUAg 2 8 542 563 [mm9:14:102066923-102066944:+] 0.5641 120 6 -4.31 -0.1033 MIMAT0003127 mmu-miR-484 50933 Uchl3 uagcccuccccugacUCGGACu |||||| cuuaaaauuacuacaAGCCUGa 2 8 619 640 [mm9:14:102067000-102067021:+] 0.5403 120 6 -12.39 -0.1221 MIMAT0003186 mmu-miR-369-3p 50933 Uchl3 uuUCUAGUUGGU-ACAUAAUAa | | ||| :| |||||||| aaACACCAAAUACUGUAUUAUu 2 20 12 33 [mm9:14:102095214-102095235:+] 0.6131 158 7 -10.85 -1.2128 MIMAT0003186 mmu-miR-369-3p 50933 Uchl3 uuucuaguugguacAUAAUAa |||||| uauauauuugacauUAUUAUu 2 8 513 533 [mm9:14:102066894-102066914:+] 0.5641 120 6 -5.21 -0.1078 MIMAT0004790 mmu-miR-503* 50933 Uchl3 gguccgucaccuuugUUAUGAg |||||| uugacagaaacaccaAAUACUg 2 8 5 26 [mm9:14:102095207-102095228:+] 0.6131 120 6 -7.68 -0.1145 MIMAT0004790 mmu-miR-503* 50933 Uchl3 gguccgucaccuuUGUUAUGAg ::|||||| auuugaucacacuGUAAUACUg 2 10 441 462 [mm9:14:102066822-102066843:+] 0.5489 125 6 -6.77 -0.1242 MIMAT0003189 mmu-miR-291b-5p 50933 Uchl3 ccucucccGGAGGUGAAACUAg ::|::| |||||| gguuuuuuUUUUUAAUUUGAUc 2 15 427 448 [mm9:14:102066808-102066829:+] 0.5489 122 6 -12.43 -0.1275 MIMAT0003373 mmu-miR-302b* 50933 Uchl3 ucuuuCGUAAGGGUACAAUUUca ||| | | |||||| uauuuGCA-ACAAAAGUUAAAuu 3 19 30 51 [mm9:14:102095232-102095253:+] 0.6131 124 0 -4.30 -0.1022 MIMAT0004820 mmu-miR-744* 50933 Uchl3 uccaacuccAAUCACCGUUGUc ||| | |||||| aauacuguaUUAUUUGCAACAa 2 14 20 41 [mm9:14:102095222-102095243:+] 0.6131 125 6 -5.60 -0.4597 MIMAT0003741 mmu-miR-674* 50933 Uchl3 aaCAAGACUCUACCCUCGACAc |||:| : ||||||||| cgGUUUUACUGAGGGAGCUGUa 2 21 41 62 [mm9:14:102066422-102066443:+] 0.5319 160 7 -22.33 -0.4653 MIMAT0003455 mmu-miR-679 50933 Uchl3 ugguucucaguggaGUGUCAgg |||||| cauauaugaauauaCACAGUag 3 9 406 427 [mm9:14:102066787-102066808:+] 0.5489 120 0 -8.77 -0.1990 MIMAT0003457 mmu-miR-680 50933 Uchl3 ggggguacagucguCUACGGg |||||| aaaguuaaauuucuGAUGCCa 2 8 41 61 [mm9:14:102095243-102095263:+] 0.6131 120 6 -11.13 -0.4563 MIMAT0003462 mmu-miR-684 50933 Uchl3 aacugaacuuccCUUUUGa |||||| gauguuuuuauaGAAAACa 2 8 389 407 [mm9:14:102066770-102066788:+] 0.5489 120 6 -4.04 -0.1885 MIMAT0003474 mmu-miR-694 50933 Uchl3 gaaguccGUUGUAAAAGUc :||:||||||| aaauuuuUAAUAUUUUCAu 2 13 73 91 [mm9:14:102095275-102095293:+] 0.6388 152 7 -8.22 -1.3275 MIMAT0003474 mmu-miR-694 50933 Uchl3 gaAGUCCGUUGUAAAAGUc | | ||| |||||:| acUAACUCAAAAUUUUUAa 2 18 64 82 [mm9:14:102095266-102095284:+] 0.6388 137 0 -4.16 -0.3475 MIMAT0003474 mmu-miR-694 50933 Uchl3 gaaguccguuguAAAAGUc |||||| uauaacuugcuuUUUUCAc 2 8 466 484 [mm9:14:102066847-102066865:+] 0.5565 120 6 -5.25 -0.1200 MIMAT0003476 mmu-miR-669b 50933 Uchl3 ugUACGUGUACGUGUGUUUUga || :|: |||| |||||| guAU-UAUUUGCA-ACAAAAgu 3 21 26 45 [mm9:14:102095228-102095247:+] 0.6131 136 0 -9.08 -0.1389 MIMAT0003478 mmu-miR-467b* 50933 Uchl3 cacaaccacacacauACAUAUa |||||| ugaauagcuuuccauUGUAUAg 2 8 542 563 [mm9:14:102066923-102066944:+] 0.5641 120 6 -2.97 -0.1033 MIMAT0003493 mmu-miR-703 50933 Uchl3 aaGAAAGGAAGACUUCC--AAAa :|||:|||:|||||| ||| caUUUUUCUUUUGAAGGCCUUUu 2 20 158 180 [mm9:14:102066539-102066561:+] 0.5181 131 0 -19.65 -0.5526 MIMAT0003493 mmu-miR-703 50933 Uchl3 aagaaaggaagacuUCCAAAa |||||| ugaauauacacaguAGGUUUu 2 8 412 432 [mm9:14:102066793-102066813:+] 0.5489 120 6 -6.81 -0.1599 MIMAT0003496 mmu-miR-706 50933 Uchl3 aaaaaacucugucccAAAGAGa |||||| uugaaaucuaagaauUUUCUCg 2 8 588 609 [mm9:14:102066969-102066990:+] 0.5641 120 6 -5.90 -0.1559 MIMAT0003498 mmu-miR-708* 50933 Uchl3 gaucuucgagugucAGAUCAac |||||| guauaguauauuuaUCUAGUaa 3 9 558 579 [mm9:14:102066939-102066960:+] 0.5641 120 0 -7.79 -0.2428 MIMAT0003502 mmu-miR-712 50933 Uchl3 ccaUGGCGGGCCCACUUCCuc |:: ::| |||||| aucAUUUUUCUUUUGAAGGcc 3 19 156 176 [mm9:14:102066537-102066557:+] 0.5181 122 0 -8.45 -0.1249 MIMAT0004210 mmu-miR-804 50933 Uchl3 agguccacuccUUG-UUGAGUgu ||| |||||| ucugaugccauAACUAACUCAaa 3 12 52 74 [mm9:14:102095254-102095276:+] 0.6260 126 0 -9.25 -0.5748 MIMAT0004838 mmu-miR-742* 50933 Uchl3 acUAAUCGUUGGUACACUCAu |||| ::|||||| | uaAUUAAACUUUAUGUGAAUa 2 20 101 121 [mm9:14:102095303-102095323:+] 0.6388 123 0 -9.29 -0.1854 MIMAT0004842 mmu-miR-879 50933 Uchl3 ccGAAUCU---CGAUAUUCGGAga |||| | ||| |||||| uaCUUAAAAUUACUACAAGCCUga 3 20 617 640 [mm9:14:102066998-102067021:+] 0.5403 134 0 -11.42 -0.1147 MIMAT0004843 mmu-miR-879* 50933 Uchl3 ggcUUUCGA-ACUUCGGUAUUcg ||| :| ||| ||||||| guuAAAUUUCUGAUGCCAUAAcu 3 20 44 66 [mm9:14:102095246-102095268:+] 0.6260 146 0 -10.81 -0.2295 MIMAT0004846 mmu-miR-881 50933 Uchl3 agaUAAGU-CUUUUCUGUGUCAa || :| ||| | ||||||| aacAUAUAUGAAUAUACACAGUa 2 20 404 426 [mm9:14:102066785-102066807:+] 0.5489 158 7 -10.91 -1.2985 MIMAT0004887 mmu-miR-467d* 50933 Uchl3 cacauccacacacauACAUAUa |||||| ugaauagcuuuccauUGUAUAg 2 8 542 563 [mm9:14:102066923-102066944:+] 0.5641 120 6 -4.31 -0.1033 MIMAT0004892 mmu-miR-568 50933 Uchl3 cacACAUAUGUAAAUAUGUa | |: | |||||||| auaUUUGGAAUUUUAUACAu 2 18 293 312 [mm9:14:102066674-102066693:+] 0.5224 149 7 -6.98 -1.0764 MIMAT0004893 mmu-miR-574-5p 50933 Uchl3 uguguGAGUGUGUGUGUGUGAgu :| |: :: |||||| uuuuuUUAAUUUGAUCACACUgu 3 19 433 455 [mm9:14:102066814-102066836:+] 0.5489 122 0 -7.61 -0.1764 MIMAT0004938 mmu-miR-875-3p 50933 Uchl3 guaUCGGAGUCAUAAAAGUcc | ::|:| |||||||| aaaAUUUUUAAUAUUUUCAuu 3 19 72 92 [mm9:14:102095274-102095294:+] 0.6388 142 0 -6.91 -0.3847 MIMAT0004938 mmu-miR-875-3p 50933 Uchl3 guaucgGAGUCAUAAAAGUcc ||:: | |||||| uuauaaCUUGCUUUUUUCAcu 3 16 465 485 [mm9:14:102066846-102066866:+] 0.5565 131 0 -4.33 -0.1209 MIMAT0005291 mmu-miR-582-5p 50933 Uchl3 ucauugaccAACUUGU-UGACAu |||| || ||||| uuuuuuaauUUGAUCACACUGUa 2 14 434 456 [mm9:14:102066815-102066837:+] 0.5489 121 0 -10.22 -1.2210 MIMAT0005293 mmu-miR-467e 50933 Uchl3 uguAUAUGUACGAGUGUGA-AUa || |: || ||||||| || uuuUA-AUUUGAUCACACUGUAa 2 20 436 457 [mm9:14:102066817-102066838:+] 0.5489 125 0 -9.63 -1.2480 MIMAT0005293 mmu-miR-467e 50933 Uchl3 uguauauGUACGAGUG-UGAAUa |:| :|||| ||||| auuuucuCGUUUUCACUACUUAa 2 16 601 623 [mm9:14:102066982-102067004:+] 0.5403 123 0 -12.26 -1.2387 MIMAT0005294 mmu-miR-467e* 50933 Uchl3 uaUAUCCACA---CACAUA-CAUAUa |||| | | ||||| ||||| gaAUAGCUUUCCAUUGUAUAGUAUAu 2 21 543 568 [mm9:14:102066924-102066949:+] 0.5641 123 0 -9.73 -1.0894 MIMAT0005830 mmu-miR-466l 50933 Uchl3 uuaUACACACGU-ACAUAAAUAu || ||| :| | ||||||| uccAU-UGUAUAGUAUAUUUAUc 2 20 552 573 [mm9:14:102066933-102066954:+] 0.5641 152 7 -4.59 -1.0348 MIMAT0005838 mmu-miR-669j 50933 Uchl3 acAAACGUA-CACU--CAUAUACgu ||| :|| | | |||||| ugUUUUUAUAGAAAACAUAUAUGaa 3 21 391 415 [mm9:14:102066772-102066796:+] 0.5489 122 0 -6.31 -0.1968 MIMAT0005839 mmu-miR-669f 50933 Uchl3 uaugcacacacACAUA-CAUAUAc ||||| |||||| uagcuuuccauUGUAUAGUAUAUu 2 13 546 569 [mm9:14:102066927-102066950:+] 0.5641 124 6 -7.68 -1.0966 MIMAT0005839 mmu-miR-669f 50933 Uchl3 uaugcacacacaCAUACAUAUAc ||| |||||| guauuaacaccaGUAAGUAUAUa 2 12 496 518 [mm9:14:102066877-102066899:+] 0.5641 123 6 -5.89 -0.2219 MIMAT0005840 mmu-miR-669i 50933 Uchl3 cauacguacacacAUAUACgu |||||| uuuauagaaaacaUAUAUGaa 3 9 395 415 [mm9:14:102066776-102066796:+] 0.5489 120 0 -4.30 -0.1968 MIMAT0005843 mmu-miR-1188 50933 Uchl3 aggaccggguuggAGUGUGGu ||||||: uuuuuuaauuugaUCACACUg 2 9 434 454 [mm9:14:102066815-102066835:+] 0.5489 124 0 -9.62 -0.1748 MIMAT0005846 mmu-miR-467f 50933 Uchl3 acauccacacacacACAUAUa |||||| gaauagcuuuccauUGUAUAg 2 8 543 563 [mm9:14:102066924-102066944:+] 0.5641 120 6 -3.63 -0.1033 MIMAT0007864 mmu-miR-1897-5p 50933 Uchl3 gggGGAGAAAGAG-GUAG-GUUUc |:|:|||| | :||| |||| uugCUUUUUUCACUUAUCACAAAc 2 20 472 495 [mm9:14:102066853-102066876:+] 0.5565 130 0 -13.39 -1.1316 MIMAT0007875 mmu-miR-1898 50933 Uchl3 cuAGGGGACACUUGGAACUGGa |:::| | || ||||||: uaUUUUC-AUUAA-CUUGACUa 2 21 83 102 [mm9:14:102095285-102095304:+] 0.6388 128 0 -10.02 -0.7360 MIMAT0007875 mmu-miR-1898 50933 Uchl3 cuaggggacacuUGGAACUGga |:|||||| -----------cAUCUUGACag 3 11 1 11 [mm9:14:102095203-102095213:+] 0.7238 126 0 -10.31 -0.1095 MIMAT0009406 mmu-miR-1941-3p 50933 Uchl3 uacccucuaugacGAUUCUac |||||| ugcuguuugaaauCUAAGAau 3 9 582 602 [mm9:14:102066963-102066983:+] 0.5641 120 0 -7.05 -0.1338 MIMAT0009419 mmu-miR-669m 50933 Uchl3 uauacaaacacaccuACAUAUa |||||| ugaauagcuuuccauUGUAUAg 2 8 542 563 [mm9:14:102066923-102066944:+] 0.5641 120 6 -2.97 -0.1033 MIMAT0009427 mmu-miR-669n 50933 Uchl3 uguGUGUAGGUGUGUGUUUa ||:| |:| || |||| ugcCAUAACUA-ACUCAAAa 2 18 57 75 [mm9:14:102095259-102095277:+] 0.6260 123 0 -7.56 -0.2789 MIMAT0009427 mmu-miR-669n 50933 Uchl3 uguguguagguguGUGUUUa |||||| uuuuuucacuuauCACAAAc 2 8 476 495 [mm9:14:102066857-102066876:+] 0.5565 120 6 -10.03 -0.1359 MIMAT0009428 mmu-miR-1956 50933 Uchl3 aggcgacUGAGUCGGGACCUGa |:| | :||||||| uuuacaaAUUAAAUCCUGGACc 2 16 85 106 [mm9:14:102066466-102066487:+] 0.4693 151 7 -16.91 -0.9062 MIMAT0009434 mmu-miR-1961 50933 Uchl3 aaGAUUGAUGAUGGAgu :|:||| |||||| cuUUGACU-CUACCUgu 3 16 124 139 [mm9:14:102095326-102095341:+] 0.6270 133 0 -13.96 -0.3785 MIMAT0009440 mmu-miR-1967 50933 Uchl3 cguagAAGAGGGGUCCUAGGAGu ||:| : || |||||| uggaaUUUUAUACAUCAUCCUCu 2 19 298 320 [mm9:14:102066679-102066701:+] 0.5489 126 6 -11.65 -0.1957 MIMAT0009456 mmu-miR-1839-5p 50933 Uchl3 guucUGGACAAGAUAGAUGGAa | || || ||||||| aauaAACU-UUGACUCUACCUg 2 19 118 138 [mm9:14:102095320-102095340:+] 0.6270 144 7 -10.71 -0.7616 MIMAT0009457 mmu-miR-1839-3p 50933 Uchl3 cgacaaccAUCUAU-UCAUCCAGa || | | |||||||: uauaugaaUAUACACAGUAGGUUu 2 16 408 431 [mm9:14:102066789-102066812:+] 0.5489 134 0 -11.59 -0.2159 MIMAT0012772 mmu-miR-599 50933 Uchl3 caAACUAUUUGACU-GUGUu || ||| :||| |||| uuUUUUUAAUUUGAUCACAc 2 18 433 452 [mm9:14:102066814-102066833:+] 0.5489 121 0 -6.87 -1.1840 MIMAT0012774 mmu-miR-664 50933 Uchl3 auccgaccccucauuUACUUAu |||||| uuauagaaaacauauAUGAAUa 2 8 396 417 [mm9:14:102066777-102066798:+] 0.5489 120 6 -5.39 -0.1824 MIMAT0000121 mmu-let-7g 50933 Uchl3 uugACAUGUUUGA---U--GAUGGAgu || |:||||| | |||||| augUGAAUAAACUUUGACUCUACCUgu 3 20 113 139 [mm9:14:102095315-102095341:+] 0.6270 133 0 -14.32 -0.4051 MIMAT0000121 mmu-let-7g 50933 Uchl3 uuGAC-AUGUUUGAUGAUGGAGu ||| |:| |: |||| ||| uuCUGAUGC-CAUAACUAACUCa 2 21 51 72 [mm9:14:102095253-102095274:+] 0.6260 121 0 -13.75 -0.2781 MIMAT0000122 mmu-let-7i 50933 Uchl3 uugUCGUGUUUGAUGAUGGAgu | | : :||| |||||| auaAACUUUGACU-CUACCUgu 3 20 119 139 [mm9:14:102095321-102095341:+] 0.6270 129 0 -11.96 -0.3814 MIMAT0000125 mmu-miR-23b 50933 Uchl3 ccauuagggaccguUACACUa |||||| acuaauuaaacuuuAUGUGAa 2 8 99 119 [mm9:14:102095301-102095321:+] 0.6388 120 6 -7.66 -0.5311 MIMAT0000128 mmu-miR-30a 50933 Uchl3 gaaggucagcuccuaCAAAUGu |||||| auaucuguaauguuaGUUUACa 2 8 69 90 [mm9:14:102066450-102066471:+] 0.4958 120 6 -9.34 -0.1198 MIMAT0000130 mmu-miR-30b 50933 Uchl3 ucgacucacauccuaCAAAUGu |||||| auaucuguaauguuaGUUUACa 2 8 69 90 [mm9:14:102066450-102066471:+] 0.4958 120 6 -11.42 -0.1163 MIMAT0000133 mmu-miR-101a 50933 Uchl3 aagucaauagugucAUGACAu |||||| acagaaacaccaaaUACUGUa 2 8 8 28 [mm9:14:102095210-102095230:+] 0.6131 120 6 -13.54 -0.2794 MIMAT0000133 mmu-miR-101a 50933 Uchl3 aagUCA-AUAGUGUCAUGACAu ||| | :|:| |||||| cugAGUAAAAUAUAUUACUGUc 2 19 637 658 [mm9:14:102067018-102067039:+] 0.5165 125 6 -9.33 -0.1925 MIMAT0000133 mmu-miR-101a 50933 Uchl3 aagucaauagugucAUGACAu |||||| ugaucacacuguaaUACUGUu 2 8 444 464 [mm9:14:102066825-102066845:+] 0.5489 120 6 -11.60 -0.1622 MIMAT0000140 mmu-miR-128 50933 Uchl3 uuucucuggccaaGUGACAcu |||||| uuuaauuugaucaCACUGUaa 3 9 437 457 [mm9:14:102066818-102066838:+] 0.5489 120 0 -9.39 -0.2229 MIMAT0000142 mmu-miR-9 50933 Uchl3 agUAUGUCGAUCUAU-UGGUUUcu || : | ||| | |||||| -cAUCUUGACAGAAACACCAAAua 3 22 1 23 [mm9:14:102095203-102095225:+] 0.6131 132 0 -9.45 -0.1634 MIMAT0000144 mmu-miR-132 50933 Uchl3 gcUGGUACCGACA-UCUGACAAu |:|| |||| | |||||| ugAUCA-CACUGUAAUACUGUUu 2 21 444 465 [mm9:14:102066825-102066846:+] 0.5489 125 6 -18.14 -0.1851 MIMAT0000150 mmu-miR-138 50933 Uchl3 gccggacuaaguGUUGUGGUCGa :||||||||: ucacaaacguauUAACACCAGUa 2 12 488 510 [mm9:14:102066869-102066891:+] 0.5641 135 0 -14.07 -0.2435 MIMAT0000155 mmu-miR-142-3p 50933 Uchl3 agguauuucauccuuuGUGAUGu |||||| agaauuuucucguuuuCACUACu 2 8 598 620 [mm9:14:102066979-102067001:+] 0.5641 120 6 -9.10 -0.1702 MIMAT0000156 mmu-miR-144 50933 Uchl3 ucaUGUAGUAGAUAUGACAu ||| || ||||||| gaaACACCA--AAUACUGUa 2 18 11 28 [mm9:14:102095213-102095230:+] 0.6131 146 7 -11.61 -1.2652 MIMAT0000156 mmu-miR-144 50933 Uchl3 ucAUGUAGUAGAUAUGACAu |||||: |: ||||||| ugUACAUU-UUGAUACUGUu 2 19 232 250 [mm9:14:102066613-102066631:+] 0.5303 160 7 -16.20 -0.9183 MIMAT0000156 mmu-miR-144 50933 Uchl3 ucaUGUAGUAGAUAUGACAu ||| ::| ||||||| aucACACUGU-AAUACUGUu 2 18 446 464 [mm9:14:102066827-102066845:+] 0.5489 147 7 -10.96 -1.1778 MIMAT0000156 mmu-miR-144 50933 Uchl3 ucauguaguagauAUGACAu |||||| gaguaaaauauauUACUGUc 2 8 639 658 [mm9:14:102067020-102067039:+] 0.5165 120 6 -10.81 -0.1943 MIMAT0000212 mmu-miR-183 50933 Uchl3 ucACUUAAGAUGGUCACGGUAu | || |:| |:: |||||| agUUAAAUUU-CUGAUGCCAUa 2 21 43 63 [mm9:14:102095245-102095265:+] 0.6131 126 6 -13.63 -0.3357 MIMAT0000220 mmu-miR-190 50933 Uchl3 ugGAUUAUAUAGUUUGUA-UAGu :|:: || |:| |||| ||| auUUGGAAUUUUAUACAUCAUCc 2 21 295 317 [mm9:14:102066676-102066698:+] 0.5224 124 0 -6.76 -1.1906 MIMAT0000229 mmu-miR-199a-5p 50933 Uchl3 cuuguccAUCAGACU--UGUGACcc || |:||| |||||| uuuuuuuUAAUUUGAUCACACUGua 3 17 432 456 [mm9:14:102066813-102066837:+] 0.5489 135 0 -10.16 -0.1877 MIMAT0000237 mmu-miR-204 50933 Uchl3 uccguauccuacugUUUCCCUu ||||||| uaauuccaccagugAAAGGGAc 2 9 360 381 [mm9:14:102066741-102066762:+] 0.5489 140 7 -9.32 -0.3148 MIMAT0000248 mmu-miR-30e 50933 Uchl3 gaaggucaguuccuaCAAAUGu |||||| auaucuguaauguuaGUUUACa 2 8 69 90 [mm9:14:102066450-102066471:+] 0.4958 120 6 -9.34 -0.1174 MIMAT0000366 mmu-miR-290-5p 50933 Uchl3 uuucacggggguauCAAACUca |||||| ucuaguaaaaugcuGUUUGAaa 3 9 572 593 [mm9:14:102066953-102066974:+] 0.5641 120 0 -5.41 -0.1267 MIMAT0000369 mmu-miR-292-5p 50933 Uchl3 guuuucucggggGUCAAACUca | |||||| ucuaguaaaaugCUGUUUGAaa 3 11 572 593 [mm9:14:102066953-102066974:+] 0.5641 122 0 -6.62 -0.1243 MIMAT0000383 mmu-let-7d 50933 Uchl3 uuGA-UACGUUGGAUGAUGGAGa || |||| | : |||| ||| uuCUGAUGCCA-UAACUAACUCa 2 21 51 72 [mm9:14:102095253-102095274:+] 0.6260 125 0 -10.69 -0.2733 MIMAT0000383 mmu-let-7d 50933 Uchl3 uugauACGUUGGAUGAUGGAga | ::||: |||||| uaaacUUUGACU--CUACCUgu 3 18 120 139 [mm9:14:102095322-102095341:+] 0.6270 122 0 -15.14 -0.3814 MIMAT0000513 mmu-miR-19b 50933 Uchl3 agUCAAAACGUACCUAAACGUgu | | ||:|| ||||||| caAAUACUGUAU-UAUUUGCAac 3 22 18 39 [mm9:14:102095220-102095241:+] 0.6131 135 0 -9.51 -0.2670 MIMAT0000513 mmu-miR-19b 50933 Uchl3 agucaaaacguaccuAAACGUGu ||||||: uauacaucauccucuUUUGCAUa 2 9 306 328 [mm9:14:102066687-102066709:+] 0.5489 124 0 -8.90 -0.1397 MIMAT0000514 mmu-miR-30c 50933 Uchl3 cgacucucacauccuaCAAAUGu |||||| aauaucuguaauguuaGUUUACa 2 8 68 90 [mm9:14:102066449-102066471:+] 0.4958 120 6 -11.02 -0.1163 MIMAT0000515 mmu-miR-30d 50933 Uchl3 gaaggucagccccuaCAAAUGu |||||| auaucuguaauguuaGUUUACa 2 8 69 90 [mm9:14:102066450-102066471:+] 0.4958 120 6 -9.08 -0.1198 MIMAT0000518 mmu-miR-196a 50933 Uchl3 gggUUGUU--GUACUUUGAUGGAu ||:|| : ||| |||||| gugAAUAAACUUUGACUCUACCUg 2 20 115 138 [mm9:14:102095317-102095340:+] 0.6270 126 6 -15.80 -0.1241 MIMAT0000521 mmu-let-7a 50933 Uchl3 uugaUAUGUUGGA--U--GAUGGAgu ||| |||:| | |||||| gugaAUA-AACUUUGACUCUACCUgu 3 19 115 139 [mm9:14:102095317-102095341:+] 0.6270 126 0 -12.47 -0.4051 MIMAT0000521 mmu-let-7a 50933 Uchl3 uuGA-UAUGUUGGAUGAUGGAGu || ||:| | : |||| ||| uuCUGAUGCCA-UAACUAACUCa 2 21 51 72 [mm9:14:102095253-102095274:+] 0.6260 121 0 -11.61 -0.2781 MIMAT0000522 mmu-let-7b 50933 Uchl3 uuggUGUGUUGGAUGAUGGAgu || : : || |||||| auaaACUUUGACU-CUACCUgu 3 19 119 139 [mm9:14:102095321-102095341:+] 0.6270 124 0 -10.48 -0.3814 MIMAT0000523 mmu-let-7c 50933 Uchl3 uuggUAUGUUGGA--U--GAUGGAgu ||| |||:| | |||||| gugaAUA-AACUUUGACUCUACCUgu 3 19 115 139 [mm9:14:102095317-102095341:+] 0.6270 126 0 -11.30 -0.4051 MIMAT0000523 mmu-let-7c 50933 Uchl3 uuggUAUGUUGGAUGAUGGAGu ||:| | : |||| ||| ucugAUGCCA-UAACUAACUCa 2 19 52 72 [mm9:14:102095254-102095274:+] 0.6260 120 0 -13.97 -0.2781 MIMAT0000524 mmu-let-7e 50933 Uchl3 uugaUAUGUUGGA----GGAUGGAgu ||| |||:| :|||||| gugaAUA-AACUUUGACUCUACCUgu 3 19 115 139 [mm9:14:102095317-102095341:+] 0.6270 127 0 -12.47 -0.4051 MIMAT0000525 mmu-let-7f 50933 Uchl3 uugaUAUGUUAGAU---GAUGGAgu ||| | |:|: |||||| gugaAUAAACUUUGACUCUACCUgu 3 19 115 139 [mm9:14:102095317-102095341:+] 0.6270 129 0 -11.40 -0.4020 MIMAT0000525 mmu-let-7f 50933 Uchl3 uuGA-UAUGUUAGAUGAUGGAGu || ||:| || |||| ||| uuCUGAUGCCAU-AACUAACUCa 2 21 51 72 [mm9:14:102095253-102095274:+] 0.6260 125 0 -11.65 -0.2757 MIMAT0000532 mmu-miR-23a 50933 Uchl3 ccuuuagggaccguUACACUa |||||| acuaauuaaacuuuAUGUGAa 2 8 99 119 [mm9:14:102095301-102095321:+] 0.6388 120 6 -6.86 -0.5311 MIMAT0000533 mmu-miR-26a 50933 Uchl3 ucggAUAGGACCUAAUGAACUu |||::| | |||||| uuaaUAUUUUCAUUAACUUGAc 2 19 79 100 [mm9:14:102095281-102095302:+] 0.6388 126 6 -7.22 -0.6119 MIMAT0000534 mmu-miR-26b 50933 Uchl3 uggAUAGGACUUAAUGAACUu |||::| | | |||||| uaaUAUUUUCAUUAACUUGAc 2 19 80 100 [mm9:14:102095282-102095302:+] 0.6388 134 6 -7.41 -0.6119 MIMAT0000545 mmu-miR-98 50933 Uchl3 uugUUAUGUUGAA--U--GAUGGAgu |||| ||||| | |||||| gugAAUA-AACUUUGACUCUACCUgu 3 20 115 139 [mm9:14:102095317-102095341:+] 0.6270 135 0 -11.92 -0.4051 MIMAT0000545 mmu-miR-98 50933 Uchl3 uuGUUAUGUUGAAUGAUGGAGu ::||:| | | |||| ||| ucUGAUGCCA-UAACUAACUCa 2 21 52 72 [mm9:14:102095254-102095274:+] 0.6260 126 0 -9.83 -0.2781 MIMAT0000546 mmu-miR-103 50933 Uchl3 aguAUCGGGACAUGUUACGACGa || :|: ||| |||||||: auuUA-UCUAGUAAAAUGCUGUu 2 21 567 588 [mm9:14:102066948-102066969:+] 0.5641 146 0 -16.35 -0.1005 MIMAT0000582 mmu-miR-338-3p 50933 Uchl3 guuguuuuagugacUACGACcu |||||| auuuaucuaguaaaAUGCUGuu 3 9 567 588 [mm9:14:102066948-102066969:+] 0.5641 120 0 -8.36 -0.1005 MIMAT0004651 mmu-miR-340-5p 50933 Uchl3 uuaguCAGAGUAA--CGAAAUAUu | || ||| ||||||: aacuuGACUAAUUAAACUUUAUGu 2 18 93 116 [mm9:14:102095295-102095318:+] 0.6388 132 0 -6.06 -0.2788 MIMAT0004651 mmu-miR-340-5p 50933 Uchl3 uuagucagaguaacGAAAUAUu :|||||| aaaaauauuuggaaUUUUAUAc 2 9 289 310 [mm9:14:102066670-102066691:+] 0.5224 124 6 -2.07 -0.1002 MIMAT0000616 mmu-miR-101b 50933 Uchl3 aagucgauagugucAUGACAu |||||| acagaaacaccaaaUACUGUa 2 8 8 28 [mm9:14:102095210-102095230:+] 0.6131 120 6 -14.59 -0.2794 MIMAT0000616 mmu-miR-101b 50933 Uchl3 aagucgaUAGUGUCAUGACAu | :|:| |||||| ugaguaaAAUAUAUUACUGUc 2 15 638 658 [mm9:14:102067019-102067039:+] 0.5165 122 6 -8.54 -0.1925 MIMAT0000616 mmu-miR-101b 50933 Uchl3 aagucgauagugucAUGACAu |||||| ugaucacacuguaaUACUGUu 2 8 444 464 [mm9:14:102066825-102066845:+] 0.5489 120 6 -11.60 -0.1591 MIMAT0000647 mmu-miR-107 50933 Uchl3 acuAUCGGGACAUGUUACGACGa || :|: ||| |||||||: auuUA-UCUAGUAAAAUGCUGUu 2 21 567 588 [mm9:14:102066948-102066969:+] 0.5641 146 0 -16.35 -0.1005 MIMAT0000651 mmu-miR-19a 50933 Uchl3 agUCAAAACGUAUCUAAACGUgu | | ||:|| ||||||| caAAUACUGUAU-UAUUUGCAac 3 22 18 39 [mm9:14:102095220-102095241:+] 0.6131 135 0 -10.02 -0.2670 MIMAT0000651 mmu-miR-19a 50933 Uchl3 agucaaaacguaucuAAACGUGu ||||||: uauacaucauccucuUUUGCAUa 2 9 306 328 [mm9:14:102066687-102066709:+] 0.5489 124 0 -8.93 -0.1397 MIMAT0000656 mmu-miR-139-5p 50933 Uchl3 gacCUCUGU-GCACGUGACAUcu || ||| | :|||||| acaGAAACACCAAAUACUGUAuu 3 20 8 30 [mm9:14:102095210-102095232:+] 0.6131 130 0 -11.97 -0.4366 MIMAT0000659 mmu-miR-212 50933 Uchl3 accggcacUGAC-CUCUGACAAu |||| | |||||| uugaucacACUGUAAUACUGUUu 2 15 443 465 [mm9:14:102066824-102066846:+] 0.5489 121 6 -10.82 -0.1833 MIMAT0000665 mmu-miR-223 50933 Uchl3 accccAU-AAACUGUUUG-ACUGu || ||| |: ||| |||| uuuaaUAUUUUCAUUAACUUGACu 2 18 78 101 [mm9:14:102095280-102095303:+] 0.6388 120 0 -6.72 -1.3296 MIMAT0000668 mmu-miR-211 50933 Uchl3 uccguuuccuacugUUUCCCUu ||||||| uaauuccaccagugAAAGGGAc 2 9 360 381 [mm9:14:102066741-102066762:+] 0.5489 140 7 -9.32 -0.3148 MIMAT0000704 mmu-miR-361 50933 Uchl3 cauggggaccucuAAGACUAUu |||||||: acaaaaguuaaauUUCUGAUGc 2 10 38 59 [mm9:14:102095240-102095261:+] 0.6131 129 0 -7.31 -0.2274 MIMAT0000741 mmu-miR-377 50933 Uchl3 uguuUUCAACGGAAACACACUa || | |||| ||||| gacuAAUUAAACUUUAUGUGAa 2 19 98 119 [mm9:14:102095300-102095321:+] 0.6388 126 0 -8.66 -0.1383 MIMAT0000748 mmu-miR-383 50933 Uchl3 ucGGUGUCAG-UGGAAGACUAga | | |||: | :||||||| aaCAAAAGUUAAAUUUCUGAUgc 3 21 37 59 [mm9:14:102095239-102095261:+] 0.6131 139 0 -14.31 -0.2193 MIMAT0000748 mmu-miR-383 50933 Uchl3 ucggugucagUGGAAGACUAGa ||| ||||||| uaaauccuggACCCUCUGAUCc 2 13 94 115 [mm9:14:102066475-102066496:+] 0.4985 152 7 -16.40 -0.2311 MIMAT0004745 mmu-miR-384-5p 50933 Uchl3 uguaacggauccuuaaCAAAUGu |||||| aauaucuguaauguuaGUUUACa 2 8 68 90 [mm9:14:102066449-102066471:+] 0.4958 120 6 -10.23 -0.1198 MIMAT0001081 mmu-miR-196b 50933 Uchl3 ggguuguuguccuuuGAUGGAu |||||| gaauaaacuuugacuCUACCUg 2 8 117 138 [mm9:14:102095319-102095340:+] 0.6270 120 6 -12.69 -0.1253 MIMAT0001420 mmu-miR-433 50933 Uchl3 uguggcuccucggguAGUACUa |||||| aauuguuuuaaacauUCAUGAu 2 8 126 147 [mm9:14:102066507-102066528:+] 0.5181 120 6 -11.57 -0.1600 MIMAT0003169 mmu-miR-539 50933 Uchl3 ugugUGGUUCCUA-UUAAAGAgg || || | | ||||||| ugcaACAAAAGUUAAAUUUCUga 3 19 34 56 [mm9:14:102095236-102095258:+] 0.6131 137 0 -8.24 -0.2651 MIMAT0003169 mmu-miR-539 50933 Uchl3 ugUGUGGUUCCUAUUAAAGAGg | |:| | || | |||||| ugAAAUCUAAGA-AUUUUCUCg 2 21 589 609 [mm9:14:102066970-102066990:+] 0.5641 126 6 -9.63 -0.1559 MIMAT0003172 mmu-miR-542-3p 50933 Uchl3 aaaGUCA-AUAGUUAGACAGUGu |||| | :: ||||||| cacCAGUGAAAGGGACUGUCACg 2 20 366 388 [mm9:14:102066747-102066769:+] 0.5489 146 7 -18.29 -0.5612 MIMAT0003889 mmu-miR-758 50933 Uchl3 aucaccugguccAGUGUUu |||||| uuuuuucacuuaUCACAAa 2 8 476 494 [mm9:14:102066857-102066875:+] 0.5565 120 6 -7.77 -0.1467 MIMAT0003738 mmu-miR-496 50933 Uchl3 cucuAACCGGU---ACAUUAUGAgu ||| :|| ||||||||| uaauUUGAUCACACUGUAAUACUgu 3 19 439 463 [mm9:14:102066820-102066844:+] 0.5489 141 0 -11.74 -0.1167 MIMAT0003456 mmu-miR-495 50933 Uchl3 uucuucACGUGGUACAAACAAa || |: |||||||| acauuuUG-AUACUGUUUGUUu 2 17 235 255 [mm9:14:102066616-102066636:+] 0.5303 146 7 -9.89 -1.0268 MIMAT0004852 mmu-miR-190b 50933 Uchl3 uugggUUAUAGUUUGUA-UAGu ||| |:| |||| ||| uuuggAAUUUUAUACAUCAUCc 2 17 296 317 [mm9:14:102066677-102066698:+] 0.5489 124 0 -4.61 -1.2145 MIMAT0004854 mmu-miR-876-5p 50933 Uchl3 aucacuaagugucuCUUUAGGu ||||||: guaaaaugcuguuuGAAAUCUa 2 9 576 597 [mm9:14:102066957-102066978:+] 0.5641 124 0 -7.98 -0.1679 MIMAT0004869 mmu-miR-421 50933 Uchl3 cgcGGGUUA-AUUACAGAC-AACUa :|:|:| |||| ||| |||| uuaUCUAGUAAAAUG-CUGUUUGAa 2 21 569 592 [mm9:14:102066950-102066973:+] 0.5641 121 0 -12.55 -1.0334 MIMAT0004896 mmu-miR-590-3p 50933 Uchl3 ugaucgaauauguaUUUUAAu |||||| gccauaacuaacucAAAAUUu 2 8 58 78 [mm9:14:102095260-102095280:+] 0.6260 120 6 -3.31 -0.4586 MIMAT0004896 mmu-miR-590-3p 50933 Uchl3 ugAUCGAA--U-AUGUAUUUUAAu | |:|| | ||| ||||||| ucUCGUUUUCACUACUUAAAAUUa 2 20 605 628 [mm9:14:102066986-102067009:+] 0.5403 153 7 -8.93 -1.1032 MIMAT0004943 mmu-miR-653 50933 Uchl3 gucaucucUAACAAA-GUUGUg ||| ||| ||||| aauacuguAUUAUUUGCAACAa 2 14 20 41 [mm9:14:102095222-102095243:+] 0.6131 121 0 -6.87 -1.3066 MIMAT0005850 mmu-miR-1192 50933 Uchl3 uuaaaccAGACAA--ACAAACAAa |:|| | |||||||| uguacauUUUGAUACUGUUUGUUu 2 16 232 255 [mm9:14:102066613-102066636:+] 0.5303 150 7 -13.50 -1.0296

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G045273 Uchl3 Mus musculus 50933

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Uchl3 mmu-miR-144 beg:11 end:29 pic:3' TCATGTAGTAGATATGACAT 5'& ||| || |||||||| &5' ---ACACCAA--ATACTGTA 3' Uchl3 mmu-miR-16star beg:6 end:27 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& ||| ||| ||||||| &5' -CAGAAACACCA--AATACTG- 3' Uchl3 mmu-miR-183 beg:48 end:64 pic:3' TCACTTAAGATGGTCACGGTAT 5'& ||||. ||||||| &5' ------TTCTGA---TGCCATA 3' Uchl3 mmu-miR-1839-5p beg:125 end:138 pic:3' GTTCTGGACAAGATAGATGGAA 5'& ||| ||||||| &5' ---GAC--------TCTACCT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Uchl3 mmu-miR-142-5p 96 117 CAUCAC-GA--AAGAUGAAAUAC- || || || |||||||| ---UUGACUAAUUAAACUUUAUGU Uchl3 mmu-miR-196a 117 140 GGUUGUUGU--ACUUUGAUGGAU- ||:|| ||| ||||||: -GAAUAAACUUUGACUCUACCUGU Uchl3 mmu-miR-694 79 92 GAAGUCCGUUGUAAAAGUC :||:||||||| ------UUAAUAUUUUCAU Uchl3 mmu-miR-142-5p 108 115 CAUCACGAAAGA-----------------------UGAAAUAC |||||||| AAAUUUUUAAUAUUUUCAUUAACUUGACUAAUUAAACUUUAUGU Uchl3 mmu-miR-694 84 91 GAAGUCC------------------------GUUGUAAAAGUC :||:||||||| AUUUCUGAUGCCAUAACUAACUCAAAAUUUUUAAUAUUUUCAU Uchl3 mmu-miR-196a 116 138 ggUUGUU--GUACUUUGAUGGAu ||:|| : ||| |||||| tgAATAAACTTTGACTCTACCTg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Uchl3 RAID00011573 mmu-miR-211-5p miRNA MIMAT0000668 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00025219 mmu-miR-138-5p miRNA MIMAT0000150 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00070978 mmu-miR-190b-5p miRNA MIMAT0004852 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00188927 mmu-miR-19b-3p miRNA MIMAT0000513 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00377991 mmu-miR-377-3p miRNA MIMAT0000741 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00378482 mmu-miR-26b-5p miRNA MIMAT0000534 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00407516 mmu-let-7b-5p miRNA MIMAT0000522 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00493576 mmu-miR-132-3p miRNA MIMAT0000144 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00497270 mmu-miR-384-5p miRNA MIMAT0004745 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00663675 mmu-miR-128-3p miRNA MIMAT0000140 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00668345 mmu-miR-98-5p miRNA MIMAT0000545 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00683609 mmu-miR-338-3p miRNA MIMAT0000582 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00788352 mmu-miR-30a-5p miRNA MIMAT0000128 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00831415 mmu-miR-758-3p miRNA MIMAT0003889 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID00836857 mmu-miR-30d-5p miRNA MIMAT0000515 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01203591 mmu-miR-9-5p miRNA MIMAT0000142 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01270015 mmu-let-7g-5p miRNA MIMAT0000121 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01287037 mmu-miR-101a-3p miRNA MIMAT0000133 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01391471 mmu-miR-142a-5p miRNA MIMAT0000154 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01520107 mmu-miR-496a-3p miRNA MIMAT0003738 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01626799 mmu-miR-30e-5p miRNA MIMAT0000248 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01635716 mmu-miR-142a-3p miRNA MIMAT0000155 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01651245 mmu-miR-1192 miRNA MIMAT0005850 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01664814 mmu-miR-204-5p miRNA MIMAT0000237 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01668060 mmu-let-7f-5p miRNA MIMAT0000525 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01673461 mmu-miR-340-5p miRNA MIMAT0004651 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01723167 mmu-miR-103-3p miRNA MIMAT0000546 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID01888295 mmu-miR-144-3p miRNA MIMAT0000156 Uchl3 mRNA 50933 Prediction 0.2381 Uchl3 RAID02141865 mmu-let-7c-5p miRNA MIMAT0000523 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02230358 mmu-miR-101b-3p miRNA MIMAT0000616 Uchl3 mRNA 50933 Prediction 0.2202 Uchl3 RAID02323906 mmu-miR-421-3p miRNA MIMAT0004869 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02391782 mmu-miR-495-3p miRNA MIMAT0003456 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02395795 mmu-miR-199a-5p miRNA MIMAT0000229 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02395899 mmu-miR-16-1-3p miRNA MIMAT0004625 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02473259 mmu-miR-196a-5p miRNA MIMAT0000518 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02513308 mmu-miR-183-5p miRNA MIMAT0000212 Uchl3 mRNA 50933 Prediction 0.2202 Uchl3 RAID02567463 mmu-miR-23b-3p miRNA MIMAT0000125 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02647533 mmu-miR-26a-5p miRNA MIMAT0000533 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02691453 mmu-miR-19a-3p miRNA MIMAT0000651 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02695951 mmu-let-7a-5p miRNA MIMAT0000521 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02826931 mmu-miR-369-3p miRNA MIMAT0003186 Uchl3 mRNA 50933 Prediction 0.2202 Uchl3 RAID02846085 mmu-miR-383-5p miRNA MIMAT0000748 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02875537 mmu-miR-223-3p miRNA MIMAT0000665 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02887913 mmu-miR-374c-5p miRNA MIMAT0014953 Uchl3 mRNA 50933 Prediction 0.2202 Uchl3 RAID02904484 mmu-miR-653-5p miRNA MIMAT0004943 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID02940524 mmu-miR-361-5p miRNA MIMAT0000704 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03029694 mmu-miR-107-3p miRNA MIMAT0000647 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03074638 mmu-let-7i-5p miRNA MIMAT0000122 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03138713 mmu-miR-30c-5p miRNA MIMAT0000514 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03165760 mmu-let-7d-5p miRNA MIMAT0000383 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03197953 mmu-miR-292a-5p miRNA MIMAT0000369 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03261127 mmu-miR-433-3p miRNA MIMAT0001420 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03308385 mmu-miR-139-5p miRNA MIMAT0000656 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03482606 mmu-miR-539-5p miRNA MIMAT0003169 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03549617 mmu-miR-290a-5p miRNA MIMAT0000366 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03630721 mmu-miR-190a-5p miRNA MIMAT0000220 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03653881 mmu-miR-21b miRNA MIMAT0025121 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03658917 mmu-miR-196b-5p miRNA MIMAT0001081 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03680664 mmu-miR-590-3p miRNA MIMAT0004896 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03686803 mmu-miR-23a-3p miRNA MIMAT0000532 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03715747 mmu-miR-876-5p miRNA MIMAT0004854 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03733521 mmu-miR-212-3p miRNA MIMAT0000659 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03756158 mmu-miR-542-3p miRNA MIMAT0003172 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03762610 mmu-miR-694 miRNA MIMAT0003474 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03938292 mmu-miR-30b-5p miRNA MIMAT0000130 Uchl3 mRNA 50933 Prediction 0.1828 Uchl3 RAID03958481 mmu-let-7e-5p miRNA MIMAT0000524 Uchl3 mRNA 50933 Prediction 0.1828