Trim52
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Trim52ATTTA715-14161550-1554;1705-1709;1759-1763;1831-1835;2344-2348;2434-2438;2457-2461;2934-2938;3069-3073
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004523mmu-miR-29b*212085Trim52auUUGGUGGUAUAC---UUUGGUCg || || | || ||||||| uaAAGCAAAACUUGCCAAAACCAGg221931955[mm9:14:106507759-106507783:+]0.50671437-13.33-0.5030
MIMAT0004530mmu-miR-127*212085Trim52uagucuCGGGA-GACUCGAAGUc ||::| || ||||||| aaaacuGCUUUGCUUAGCUUCAa217435457[mm9:14:106507263-106507285:+]0.50531557-14.76-0.8080
MIMAT0000143mmu-miR-9*212085Trim52ugAAAGCCA--AUAGA--UCGAAAUa |||| | |: || ||||||| aaUUUCAUUAGUGCCUGCAGCUUUAa221245270[mm9:14:106507073-106507098:+]0.50321467-7.50-0.3901
MIMAT0000154mmu-miR-142-5p212085Trim52ucaucacgaaagAUGAAAUAc |||||||| gauuugggaacaUACUUUAUa210536556[mm9:14:106507364-106507384:+]0.50321457-6.81-0.8322
MIMAT0000161mmu-miR-151-3p212085Trim52ggaguuccUCGGAGUCA-GAUc ||:|||||| ||| uacauuucAGUCUCAGUGCUAu214192213[mm9:14:106507020-106507041:+]0.50261250-16.15-0.2483
MIMAT0004539mmu-miR-183*212085Trim52aaUACCGGGAAGCCAUUA-AGUg || |:::| : ||||| ||| caAUAGUUUUAUAGUAAUGUCAg221568590[mm9:14:106507396-106507418:+]0.50421240-6.39-0.9373
MIMAT0004541mmu-miR-188-3p212085Trim52acgUUUGGGACGUACACCCUc |:| ::| : ||||||| cagAGAAUUUAUUUGUGGGAa219409429[mm9:14:106507237-106507257:+]0.50531507-12.61-0.9346
MIMAT0000218mmu-miR-24-1*212085Trim52ugACUAUAGUCGAGUCAUCCGUg ||| | ::| ||||||||| ccUGAAAAUGG--CAGUAGGCAa222883903[mm9:14:106507711-106507731:+]0.50671587-20.22-0.6725
MIMAT0000218mmu-miR-24-1*212085Trim52ugACUAU-AGUCGAGUCAUC--CGUg | :|| |:|||||||||| ||| agUUGUAUUUAGCUCAGUAGUAGCAg222283308[mm9:14:106507111-106507136:+]0.50101280-23.75-0.4738
MIMAT0000234mmu-miR-201212085Trim52uucUUGUUACGGAAUGACUCau ||||| |||||| caaAACAA-AAAAAACUGAGaa320163183[mm9:14:106506991-106507011:+]0.51651210-10.38-0.1074
MIMAT0000240mmu-miR-207212085Trim52cucccuCCUCUCGGU--CCU-CUUCg | || |||| ||| |||| augaauGUAGUGCCAUUGGAUGAAGu218108133[mm9:14:106506936-106506961:+]0.53041200-15.40-0.7365
MIMAT0000367mmu-miR-291a-5p212085Trim52ucucucccggaggUGAAACUac ||||||| uggaaaauaugaaACUUUGAaa310832853[mm9:14:106507660-106507681:+]0.50671250-9.05-0.1021
MIMAT0004574mmu-miR-294*212085Trim52ucuaucccggagguAAAACUCa ||||||| aauacuuagaagauUUUUGAGg29502523[mm9:14:106507330-106507351:+]0.50231407-8.04-0.4974
MIMAT0004578mmu-miR-300*212085Trim52uguUUCCUAUUGGA----GAGAAGUu :|||| | ||| ||||||| uauGAGGAAACCCUGGAGCUCUUCAg2202550[mm9:14:106506853-106506878:+]0.53041547-19.96-0.2286
MIMAT0004579mmu-miR-302a*212085Trim52cguucauguuggugcAAAUUCa |||||| uauuauaucuuuaaaUUUAAGu2810271048[mm9:14:106507855-106507876:+]0.50281206-6.34-0.1545
MIMAT0004583mmu-miR-130b*212085Trim52ucaUC-ACGUUGUCCCUUUCUCa || | :|| |||||||| ugcAGCUUUAAAUUGGAAAGAGu220260282[mm9:14:106507088-106507110:+]0.50211507-18.01-0.6353
MIMAT0004627mmu-miR-20a*212085Trim52gaAAUUCAC----GAGCAUUACGUCa ||: ||| ||: ||||||| acUUGUGUGUAAACUUUAAAUGCAGa22114821507[mm9:14:106508310-106508335:+]0.50231477-14.09-1.1589
MIMAT0005440mmu-miR-24-2*212085Trim52ugacaaagucgaGUCAUCCGUg ||||||||| cccugaaaauggCAGUAGGCAa211882903[mm9:14:106507710-106507731:+]0.50671507-19.04-0.6762
MIMAT0005440mmu-miR-24-2*212085Trim52ugACA-AAGUCGAGUCAUC--CGUg ||| ||:|||||||||| ||| guUGUAUUUAGCUCAGUAGUAGCAg221284308[mm9:14:106507112-106507136:+]0.50101350-25.43-0.4738
MIMAT0004631mmu-miR-29a*212085Trim52gacUUGUGGUUUUCUUU-AGUCa ||| :: | ||||| |||| ugaAACUUUCACAGAAAUUCAGu220857879[mm9:14:106507685-106507707:+]0.50671270-13.27-0.1687
MIMAT0004633mmu-miR-27a*212085Trim52acgagUGUUCGUCGAUUCGGGa | || :| |||||||: uacaaAAAAUUA-CUAAGCCUa21811771197[mm9:14:106508005-106508025:+]0.50141350-12.69-0.1211
MIMAT0000551mmu-miR-323-3p212085Trim52ucuccagcuggcaCAUUACAc ||||||| caauaguuuuauaGUAAUGUc29568588[mm9:14:106507396-106507416:+]0.50421407-7.09-0.7853
MIMAT0000569mmu-miR-330*212085Trim52agagacguccGGGACACGAAACg |||| ||||||| ucuuauuuuuCCCU-UGCUUUGu21415501571[mm9:14:106508378-106508399:+]0.50151517-17.21-0.7199
MIMAT0000569mmu-miR-330*212085Trim52agAGACGUCCGGGAC---ACGAAACg | ||| |: || ||||||| acUGUGCUAUCUGUGGAUUGCUUUGg222625650[mm9:14:106507453-106507478:+]0.50391447-19.95-0.2485
MIMAT0000569mmu-miR-330*212085Trim52agagacguccgggacACGAAACg ||||||| gggaacgaagaaaacUGCUUUGc29425447[mm9:14:106507253-106507275:+]0.50531407-11.65-0.2533
MIMAT0004647mmu-miR-338-5p212085Trim52gugaGUCGUGGUCCUA-UAACAa :||:| ||| || ||||| ucagUAGUAGCAGAAUGAUUGUu219296318[mm9:14:106507124-106507146:+]0.50101300-15.78-0.2532
MIMAT0004647mmu-miR-338-5p212085Trim52gugagucgugguccuAUAACAa |||||| aagugacuuaaguuuUAUUGUa2816051626[mm9:14:106508433-106508454:+]0.50501206-6.04-0.1611
MIMAT0004656mmu-miR-345-3p212085Trim52cagaggUCUGGGGAUCAAGUCc | |: |:|||||||| ggaagaAUAUGCUUAGUUCAGa217682703[mm9:14:106507510-106507531:+]0.50671567-17.15-0.8832
MIMAT0004660mmu-miR-19a*212085Trim52caucaCGUUGA-UACGUUUUGAu |:| :| | |||||||| gugaaGUAUUUAAAGCAAAACUu218921943[mm9:14:106507749-106507771:+]0.50671527-11.57-0.3709
MIMAT0004660mmu-miR-19a*212085Trim52caucaCGUUGAUACGUUUUGau | ||| | |||||| aacaaGGAACAAAACAAAACaa318144165[mm9:14:106506972-106506993:+]0.53041330-6.65-0.1746
MIMAT0000706mmu-miR-362-5p212085Trim52uaaguguggauccaagGUUCCUaa |||||| aaguauuuaaagaaaaCAAGGAac39130153[mm9:14:106506958-106506981:+]0.53041200-9.91-0.1100
MIMAT0004704mmu-miR-335-3p212085Trim52ccAGUCCUCGUUAUUACUUUUu |:||| | | |||||||| uaUUAGG-GAACCAAUGAAAAg221805825[mm9:14:106507633-106507653:+]0.50671587-13.74-0.3736
MIMAT0002105mmu-miR-464212085Trim52auaGAGUGUCUUAUUUGAAC-CAu ||:| |||: ||||||| || aaaCUUAAAGAG-AAACUUGUGUg22114681490[mm9:14:106508296-106508318:+]0.50231340-17.43-0.9004
MIMAT0002106mmu-miR-465a-5p212085Trim52aguguaguCACGGUAAGAUUUAu |||| ||||||| caaagcuuGUGC---UCUAAAUa216726[mm9:14:106506835-106506854:+]0.52691437-11.24-0.2195
MIMAT0003127mmu-miR-484212085Trim52uagcccuccccugACUCGGACu |||||||| cugaauguuuucaUGAGCCUGg210474495[mm9:14:106507302-106507323:+]0.50231457-16.16-0.7122
MIMAT0003189mmu-miR-291b-5p212085Trim52ccucucccggaggUGAAACUag ||||||| uggaaaauaugaaACUUUGAaa310832853[mm9:14:106507660-106507681:+]0.50671250-11.04-0.1021
MIMAT0003373mmu-miR-302b*212085Trim52ucuuucguaaggguacAAUUUCa |||||| ccauuggaugaaguauUUAAAGa28120142[mm9:14:106506948-106506970:+]0.53041206-6.57-0.1165
MIMAT0003375mmu-miR-302c*212085Trim52cguccauugggguacAAUUUCg |||||| cauuggaugaaguauUUAAAGa28121142[mm9:14:106506949-106506970:+]0.53041206-6.27-0.1177
MIMAT0003728mmu-miR-374*212085Trim52gagccugUUACUAUUAUGUUgg |:| | |||||| aaauuuaAGUUAAUAUACAAaa31610391060[mm9:14:106507867-106507888:+]0.50281270-3.90-0.1775
MIMAT0004188mmu-miR-802212085Trim52uuccUACUUAGAAAC-AAUGACu || ::| | || |||||| guauAUAGGUAUAUGUUUACUGa219955977[mm9:14:106507783-106507805:+]0.50671226-10.89-0.8007
MIMAT0004823mmu-miR-666-3p212085Trim52ucguccgcUAGU-GC-GACGUCGg ||:| :| ||||||| aaaauuucAUUAGUGCCUGCAGCu215243266[mm9:14:106507071-106507094:+]0.50321447-14.49-0.4936
MIMAT0003740mmu-miR-674212085Trim52augugGUGAGGGUAGAGUCACg ||:|:| :|||||||| uaguaCAUUUCAGUCUCAGUGc218189210[mm9:14:106507017-106507038:+]0.50261657-25.27-0.3566
MIMAT0004825mmu-miR-423-5p212085Trim52uuucaGAGCGAG---AGACGG-GGAGu :|:|||| |:|||| |||| uguacUUUGCUCAUAUUUGCCGCCUCu21911011127[mm9:14:106507929-106507955:+]0.50141250-22.95-0.6786
MIMAT0003455mmu-miR-679212085Trim52ugGUUCUCAGU--GGAGUGUCAgg ||| | |:| ::||||||| gaCAA-AUUUAAGUUUCACAGUg-32116481669[mm9:14:106508476-106508497:+]0.50501330-12.73-0.1504
MIMAT0003462mmu-miR-684212085Trim52aacugaacuuccCUUUUGa |||||| gaaguauuuaaaGAAAACa28129147[mm9:14:106506957-106506975:+]0.53041206-4.06-0.1028
MIMAT0003471mmu-miR-692212085Trim52cucacUCCGCGAGUUUCUCUa || ||:||||||| ugacuAGAAACUUAAAGAGAa21714611481[mm9:14:106508289-106508309:+]0.50231527-13.14-1.0501
MIMAT0003471mmu-miR-692212085Trim52cucACUCCGCGAGUUUCUCUa | || | |:||||||| uccUUAGUC-AUUAAAGAGAa219755774[mm9:14:106507583-106507602:+]0.50671487-9.25-0.8265
MIMAT0003476mmu-miR-669b212085Trim52uguacgUGUACGUGUGUUUUGa ||| | | ||||||| aagaaaACAAGGA-ACAAAACa217139159[mm9:14:106506967-106506987:+]0.53041507-8.31-1.1341
MIMAT0003476mmu-miR-669b212085Trim52uguacguguacGUGUGUUUUGa :|:||||||: auuuaaguuaaUAUACAAAAUa21210411062[mm9:14:106507869-106507890:+]0.50281310-7.40-0.1195
MIMAT0003504mmu-miR-713212085Trim52cgACACACGGAAGUCACGu | | |:| ||||||| caUUUCAGUC-UCAGUGCu218194211[mm9:14:106507022-106507039:+]0.50261437-14.40-0.3067
MIMAT0003508mmu-miR-501-5p212085Trim52aaagugggucccuGUUUCCUAa :||||||| uaagccuaaauucUAAAGGAUu21011901211[mm9:14:106508018-106508039:+]0.50141417-13.93-0.7697
MIMAT0004846mmu-miR-881212085Trim52agauaagucuuuucuGUGUCAa |||||| gacaaauuuaaguuuCACAGUg2816481669[mm9:14:106508476-106508497:+]0.50501206-9.70-0.1822
MIMAT0004850mmu-miR-883b-5p212085Trim52acUGACGAUGGGUAAGAGUCAu | | | ::|| ||||||| auAGUACAUUUCAGUCUCAGUg221188209[mm9:14:106507016-106507037:+]0.50261527-14.72-0.1964
MIMAT0004871mmu-miR-465b-5p212085Trim52gucuagUCGUG-GUAAGAUUUAu ||| : :: ||||||| uugcaaAGCUUGUGCUCUAAAUa217426[mm9:14:106506832-106506854:+]0.52691437-10.65-0.2313
MIMAT0004873mmu-miR-465c-5p212085Trim52gucuagUCGCG-GUAAGAUUUAu ||| : :: ||||||| uugcaaAGCUUGUGCUCUAAAUa217426[mm9:14:106506832-106506854:+]0.52691437-11.34-0.2313
MIMAT0004892mmu-miR-568212085Trim52cacacAUAUGUAAAUAUGUa |:||: |||||||| uuuauUGUAU-UUUAUACAg21616181636[mm9:14:106508446-106508464:+]0.50501537-8.81-0.8308
MIMAT0004892mmu-miR-568212085Trim52cacacauauguaaAUAUGUa |||||| aaauuuaaguuaaUAUACAa2810391058[mm9:14:106507867-106507886:+]0.50281206-5.21-0.2076
MIMAT0004938mmu-miR-875-3p212085Trim52guAUCGGAGUCAUAAAAGUCc | || |: | ||||||| caUUGCAUUUAU-UUUUCAGu22015121531[mm9:14:106508340-106508359:+]0.50231457-8.99-1.0377
MIMAT0005830mmu-miR-466l212085Trim52uuAUACACACGUACAU-AAAUAu || || | |||| ||||| cuUAAGUUUUAUUGUAUUUUAUa22116111633[mm9:14:106508439-106508461:+]0.50501240-5.89-0.7279
MIMAT0005834mmu-miR-466i212085Trim52aucacacauacacACACACAUa |||||||| uuaaagagaaacuUGUGUGUAa21014721493[mm9:14:106508300-106508321:+]0.50231457-9.52-1.1172
MIMAT0007874mmu-miR-1904212085Trim52ggaggGAGGUCUCCUCGUCUUg ||| : || ||||||| uuuagCUCAGUAGUAGCAGAAu218290311[mm9:14:106507118-106507139:+]0.50101577-17.62-0.3236
MIMAT0007878mmu-miR-1894-3p212085Trim52gaGGGAAGUG-GGAGAGGGAACg |: ||| : ::|:||||||| uuCUGUUCUUAUUUUUCCCUUGc22115441566[mm9:14:106508372-106508394:+]0.50151557-26.09-0.9622
MIMAT0009415mmu-miR-1948212085Trim52gacaugcucacgaGACGGAUUu :||||||| auucuuauaaaaaUUGCCUAAu210977998[mm9:14:106507805-106507826:+]0.50671417-10.14-0.9926
MIMAT0009415mmu-miR-1948212085Trim52gacaugcucacgagaCGGAUUu |||||| acaaaaaauuacuaaGCCUAAa2811781199[mm9:14:106508006-106508027:+]0.50141206-11.25-0.1109
MIMAT0009416mmu-miR-1949212085Trim52uugAUAC-GA-CUGUAGGACCAU-AUc |:|| || ||: |||||||| || aggUGUGUCUAGAU-UCCUGGUACUAc22276101[mm9:14:106506904-106506929:+]0.53041290-19.59-0.4718
MIMAT0009417mmu-miR-1950212085Trim52acugguaUAGGAAUCUACGUCu | |:||| |||||| guguguaAACUUUAAAUGCAGa21614861507[mm9:14:106508314-106508335:+]0.50231316-14.78-0.1328
MIMAT0009417mmu-miR-1950212085Trim52acuGGUAUAG-GAAUCUAC-GUCu :|||||| | | |||| ||| uauUCAUAUCACAU-GAUGUCAGa22011541176[mm9:14:106507982-106508004:+]0.50141240-18.19-0.7532
MIMAT0009431mmu-miR-1958212085Trim52ugaauGACGAAG-GUGAAAGGAu || : || :|||||||| gccgcCUCUAUCAUACUUUCCUc21811191141[mm9:14:106507947-106507969:+]0.50141527-13.27-0.4661
MIMAT0009459mmu-miR-1982*212085Trim52ggagggguccuGGGAGGGUu :||||||| cuaucauacuuUCCUCCCAa21011261145[mm9:14:106507954-106507973:+]0.50141417-18.45-1.0439
MIMAT0012774mmu-miR-664212085Trim52auccgaccccucauuUACUUAu |||||| ccaagaaccagauuuAUGAAUa2810071028[mm9:14:106507835-106507856:+]0.50471206-6.02-0.1299
MIMAT0000128mmu-miR-30a212085Trim52gaaggucagcuccUACAAAUGu |||||||| gguauauagguauAUGUUUACu210954975[mm9:14:106507782-106507803:+]0.50671457-10.36-0.8461
MIMAT0000130mmu-miR-30b212085Trim52ucgacucACAUCC---UACAAAUGu | |||| |||||||| ccagguaUAUAGGUAUAUGUUUACu216951975[mm9:14:106507779-106507803:+]0.50671507-11.43-0.8390
MIMAT0000140mmu-miR-128212085Trim52uuucucuggCCAAGUGACACu | | ||||||| aguugucaaGAUACACUGUGc213611631[mm9:14:106507439-106507459:+]0.50121447-12.90-0.5376
MIMAT0000157mmu-miR-145212085Trim52ucccuAAGGACCCUUUUGACCUg | |:| | ||||||| ucccuUGCUUUGUUUAACUGGAa21915591581[mm9:14:106508387-106508409:+]0.50151467-12.20-0.8721
MIMAT0000209mmu-miR-129-5p212085Trim52cguucggGUCUGGCGUUUUUc :||: :||||||| uacugaaUAGG-UGCAAAAAg21514201439[mm9:14:106508248-106508267:+]0.50231447-14.80-0.1962
MIMAT0000209mmu-miR-129-5p212085Trim52cguucgggucuggcGUUUUUc |||||| aaaacaaaacaaaaCAAAAAa28154174[mm9:14:106506982-106507002:+]0.53041206-5.32-0.1569
MIMAT0000210mmu-miR-181a212085Trim52ugagUGGCUGUCGCAACUUACAa :|: ||| ||||||| uuagGCUUUCAGAACUGAAUGUu220460482[mm9:14:106507288-106507310:+]0.50381477-14.32-0.3973
MIMAT0000210mmu-miR-181a212085Trim52ugaguggcugucgcaACUUACAa ||||||| gguacuacaaaaauaUGAAUGUa2994116[mm9:14:106506922-106506944:+]0.53041407-10.01-0.9899
MIMAT0000211mmu-miR-182212085Trim52gccACAC-UCA-AGAU---GGU---AACGGUUu |||| ||| |:|| | | ||||||| uguUGUGAAGUAUUUAAAGCAAAACUUGCCAAa223917949[mm9:14:106507745-106507777:+]0.50671467-17.56-0.7374
MIMAT0000212mmu-miR-183212085Trim52ucacUUA-AGAUG-GUCACGGUAu ||| | |: :|||||||| caaaAAUAUGAAUGUAGUGCCAUu219101124[mm9:14:106506929-106506952:+]0.53041487-17.57-0.4118
MIMAT0000220mmu-miR-190212085Trim52uggAUUAUAUAGUUUGU-AUAGu | :||| |:| ||| |||| uuaUUGUAUUUUAUACAGUAUCc22016191641[mm9:14:106508447-106508469:+]0.50501270-8.86-1.1492
MIMAT0000233mmu-miR-200b212085Trim52agUAGUA-AUGGUCCGUCAUAau ||::| | ::| |||||| uuAUUGUAUUUUAUACAGUAUcc32116191641[mm9:14:106508447-106508469:+]0.50501310-7.19-0.1250
MIMAT0000236mmu-miR-203212085Trim52gaucaccAGGAUU-UGUAAAGUg |: ||: |||||||| gagaaacUUAUAGUACAUUUCAg216179201[mm9:14:106507007-106507029:+]0.51651507-10.97-0.5058
MIMAT0000247mmu-miR-143212085Trim52cucGAUGUCACG--AAGU-AGAGu :||:||| | |||| |||| aacUUAUAGUACAUUUCAGUCUCa219183206[mm9:14:106507011-106507034:+]0.50261250-16.27-0.2727
MIMAT0000248mmu-miR-30e212085Trim52gaaGGUCAGU---UCC---UACAAAUGu |||| :| ||| |||||||| aaaCCAGGUAUAUAGGUAUAUGUUUACu220948975[mm9:14:106507776-106507803:+]0.50671497-17.82-0.8461
MIMAT0004576mmu-miR-296-3p212085Trim52ccucucGGAGGUGGGUUGGGAg |:|:| : ||||||| auuaccCUUUCUUGCAACCCUa21712301251[mm9:14:106508058-106508079:+]0.50141527-17.48-0.6156
MIMAT0000514mmu-miR-30c212085Trim52cgacUCUCACAUCCUACAAAUGu | || ||| |||||||| guauAUAG-GUA-UAUGUUUACu220955975[mm9:14:106507783-106507803:+]0.50671517-11.43-0.8390
MIMAT0000514mmu-miR-30c212085Trim52cgACUCUCACA-UCCUACAAA-UGu |||||| | | :||||| || uuUGAGAGGAUAAAUGUGUUUCACc22213831407[mm9:14:106508211-106508235:+]0.50231240-15.11-0.5177
MIMAT0000515mmu-miR-30d212085Trim52gaaggucagccccUACAAAUGu |||||||| gguauauagguauAUGUUUACu210954975[mm9:14:106507782-106507803:+]0.50671457-9.52-0.8461
MIMAT0000530mmu-miR-21212085Trim52aguuGUAGUCAGACUAUUCGAu ::||| || ||||||| uuuuUGUCA--CU-AUAAGCUa219662680[mm9:14:106507490-106507508:+]0.50671457-11.06-0.6024
MIMAT0000533mmu-miR-26a212085Trim52ucgGAUAGGACCUA---AUGAACUu :||| || | ||||||| ucaUUAUGAGGGUUUCAUACUUGAa22010701094[mm9:14:106507898-106507922:+]0.50211427-12.85-0.8467
MIMAT0000534mmu-miR-26b212085Trim52uggauaggacuuaAUGAACUu ||||||| uaugaggguuucaUACUUGAa2910741094[mm9:14:106507902-106507922:+]0.50211407-9.84-0.8467
MIMAT0000567mmu-miR-329212085Trim52uuUUUCCAAUCGAC--CCACACAa |||| || || ||||||| aaAAAGCCCAGGUGUAGGUGUGUc2216184[mm9:14:106506889-106506912:+]0.53041557-16.62-0.4226
MIMAT0000567mmu-miR-329212085Trim52uuUUUCCAAUCGACCCACACAa | | |||| | ||||||| aaAUACUUUAGGU-GGUGUGUu22113311351[mm9:14:106508159-106508179:+]0.50231547-15.25-0.6604
MIMAT0004651mmu-miR-340-5p212085Trim52uuAGUCAGAGUAACGAAAUAUu |::| || | ||||||| auUUGGGAACA-UACUUUAUAg221537557[mm9:14:106507365-106507385:+]0.50321467-8.28-0.4892
MIMAT0000657mmu-miR-200c212085Trim52agGUAGUA-AUGGGCCGUCAUAau :||::| | :: |||||| uuUAUUGUAUUUUAUACAGUAUcc32216181641[mm9:14:106508446-106508469:+]0.50501240-8.70-0.1250
MIMAT0000665mmu-miR-223212085Trim52accccauaaacUGUUUGACUgu | ||||||| aacaaaacaaaAAAAACUGAga312161182[mm9:14:106506989-106507010:+]0.51651270-7.74-0.1367
MIMAT0000666mmu-miR-320212085Trim52agcgggagaguuggGUCGAAAa ||||||| uucauuagugccugCAGCUUUa29248269[mm9:14:106507076-106507097:+]0.50321407-12.87-0.6715
MIMAT0000671mmu-miR-224212085Trim52uugccuUGGUGAUCACUGAAu :::| |||||||| ugccuuGUUAAAAGUGACUUa21615941614[mm9:14:106508422-106508442:+]0.50331477-13.47-1.1884
MIMAT0000673mmu-miR-181b212085Trim52ugggUGGCUGUCGUUACUUACAa :|: ||| | ||||||| uuagGCUUUCAGAACUGAAUGUu220460482[mm9:14:106507288-106507310:+]0.50381557-14.26-0.3973
MIMAT0000673mmu-miR-181b212085Trim52uggGUGGCUGUCGU--UACUUACAa :||: ||| | |||||||| uggUACU-ACAAAAAUAUGAAUGUa22193116[mm9:14:106506921-106506944:+]0.53041497-12.49-0.9899
MIMAT0000674mmu-miR-181c212085Trim52ugagUGGCUGUC-CAACUUACAa :|: ||| ||||||| uuagGCUUUCAGAACUGAAUGUu219460482[mm9:14:106507288-106507310:+]0.50381417-12.87-0.3973
MIMAT0000674mmu-miR-181c212085Trim52ugaguggcuguccaACUUACAa ||||||| guacuacaaaaauaUGAAUGUa2995116[mm9:14:106506923-106506944:+]0.53041407-9.63-0.9958
MIMAT0004684mmu-miR-362-3p212085Trim52acUUAGGAACUUGUCCACACAa ||| ||| |: ||||||| gaAAUACUUUAGGUGGUGUGUu22113301351[mm9:14:106508158-106508179:+]0.50231647-16.38-0.6892
MIMAT0004684mmu-miR-362-3p212085Trim52acUUAGGAACUUGUCCACACAa |: || | ::|||||||| aaAGCCCAGGUGUAGGUGUGUc2216384[mm9:14:106506891-106506912:+]0.53041567-18.35-0.4226
MIMAT0004684mmu-miR-362-3p212085Trim52acuuaggaacuugucCACACAa |||||| cuuaaagagaaacuuGUGUGUa2814711492[mm9:14:106508299-106508320:+]0.50231206-10.40-0.1009
MIMAT0000739mmu-miR-375212085Trim52agugcgcucggcuugCUUGUUu |||||| uuuaaagaaaacaagGAACAAa28135156[mm9:14:106506963-106506984:+]0.53041206-8.26-0.1995
MIMAT0004745mmu-miR-384-5p212085Trim52uguaacggAUCCUUA-ACAAAUGu |||| || ||||||| cagguauaUAGGUAUAUGUUUACu216952975[mm9:14:106507780-106507803:+]0.50671587-12.62-0.8390
MIMAT0001091mmu-miR-410212085Trim52uguccgguagacacAAUAUAa |||||| cagauuuaugaauaUUAUAUc2810151035[mm9:14:106507843-106507863:+]0.50471206-4.59-0.1163
MIMAT0001537mmu-miR-429212085Trim52ugcCGUAAUGGUCUGUCAUAau |:||| ::| ||||||| auuGUAUU-UUAUACAGUAUcc32016211641[mm9:14:106508449-106508469:+]0.50501410-10.49-0.1250
MIMAT0003168mmu-miR-543212085Trim52uucuucacguggcGCUUACAAa :||||||| aggcuuucagaacUGAAUGUUu210462483[mm9:14:106507290-106507311:+]0.50381417-10.41-0.5113
MIMAT0003183mmu-miR-376c212085Trim52ugcacuuuaaaggAGAUACAa ||||||| uacuuuauaggaaUCUAUGUc29548568[mm9:14:106507376-106507396:+]0.50321407-7.60-0.6251
MIMAT0003727mmu-miR-374212085Trim52gugaaucguccaacAUAAUAUa ||||||| accagauuuaugaaUAUUAUAu2910131034[mm9:14:106507841-106507862:+]0.50471407-5.04-0.9378
MIMAT0003730mmu-miR-592212085Trim52uguaGUAG--CGUAUAACUG-UGUUa |||: |||| | ||| |||| acugCAUUCAGCAUUUGGACAACAAu220774799[mm9:14:106507602-106507627:+]0.50671260-15.47-0.2895
MIMAT0003482mmu-miR-499212085Trim52uuUGUAGUGAC--GUUCAGAAUu | | |||| :|||||||| caAAAAGACUGGAUAAGUCUUAc22014331455[mm9:14:106508261-106508283:+]0.50231547-13.24-0.3665
MIMAT0004324mmu-miR-181d212085Trim52uggGUGGCUGUUGU--UACUUACAa :||: |||| | |||||||| uggUACU-ACAAAAAUAUGAAUGUa22193116[mm9:14:106506921-106506944:+]0.53041577-14.80-0.9869
MIMAT0004324mmu-miR-181d212085Trim52ugggUGGCUGUUGUUACUUACAa :|: ||: | ||||||| uuagGCUUUCAGAACUGAAUGUu220460482[mm9:14:106507288-106507310:+]0.50381517-12.44-0.3973
MIMAT0004895mmu-miR-590-5p212085Trim52gacgUGAAAAUACU--UAUUCGAg ::||||:| | ||||||| ucagGUUUUUGUCACUAUAAGCUa219657680[mm9:14:106507485-106507508:+]0.50671577-10.84-0.6199
MIMAT0004941mmu-miR-544212085Trim52cucgaacGAUUUUUACGUCUua || ||||||||| guguaaaCUUUAAAUGCAGAua31614881509[mm9:14:106508316-106508337:+]0.50231390-14.46-0.1079
MIMAT0004941mmu-miR-544212085Trim52cucGAACGA-UUUUUA-CGUCUUa :| ||| |: |:| |||||| uauUUAGCUCAGUAGUAGCAGAAu220288311[mm9:14:106507116-106507139:+]0.50101226-12.83-0.2614
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G040427Trim52Mus musculus212085
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Trim52mmu-miR-692beg:1468end:1481pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||.||||||| &5' ----------CTTAAAGAGA- 3'
Trim52mmu-miR-692beg:758end:774pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |. |.||||||| &5' -------GTCATTAAAGAGA- 3'
Trim52mmu-miR-20astarbeg:1492end:1507pic:3' GAAATTCACGAGCATTACGTCA 5'& ||. ||||||| &5' ---------CTTTAAATGCAG- 3'
Trim52mmu-miR-1904beg:292end:312pic:3' GGAGGGAGGTC-TCCTCGTCTTG 5'& || ||| || |||||||. &5' -----CT-CAGTAGTAGCAGAAT 3'
Trim52mmu-miR-127starbeg:438end:457pic:3' TAGTCTCGGGA-GACTCGAAGTC 5'& ||..| || ||||||| &5' ------GCTTTGCTTAGCTTCA- 3'
Trim52mmu-miR-499beg:1437end:1455pic:3' TTTGTAGTGAC--GTTCAGAATT 5'& |||| .|||||||| &5' -------ACTGGATAAGTCTTA- 3'
Trim52mmu-miR-345-3pbeg:687end:703pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& |. |.|||||||| &5' --------ATGCTTAGTTCAG- 3'
Trim52mmu-miR-21beg:664end:681pic:3' AGTTGTAGTCAGAC-TATTCGAT 5'& ||| |||||||| &5' ---------GTCACTATAAGCTA 3'
Trim52mmu-miR-296-3pbeg:1233end:1251pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& |.|.| . ||||||| &5' ------CTTTCTTGCAACCCT- 3'
Trim52mmu-miR-128beg:616end:630pic:3' TTTCTCTGGCCAAGTGACACT 5'& |||. ||||||| &5' ----AGATA----CACTGTG- 3'
Trim52mmu-miR-203beg:182end:201pic:3' GATCACCAGGATT---TGTAAAGTG 5'& |.|| |||||||| &5' --------CTTATAGTACATTTCA- 3'
Trim52mmu-miR-674beg:191end:211pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||.|.| .||||||||| &5' -----CATTTCAGTCTCAGTGC 3'
Trim52mmu-miR-666-3pbeg:254end:267pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& .| |||||||. &5' -----------GC-CTGCAGCT 3'
Trim52mmu-miR-130bstarbeg:271end:283pic:3' TCATCACGTTGTCCCTTTCTCA 5'& ||||||||| &5' -------------GGAAAGAGT 3'
Trim52mmu-miR-484beg:484end:495pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||||||||. &5' -------------TGAGCCTGG 3'
Trim52mmu-miR-362-3pbeg:1333end:1352pic:3' ACTTAGGAA-CTTGTCCACACAA 5'& |.|| |. |||||||| &5' -----CTTTAGGT--GGTGTGTT 3'
Trim52mmu-miR-329beg:1335end:1352pic:3' TTTTTCCAATCGACCCACACAA 5'& |||| | |||||||| &5' -------TTAGGT-GGTGTGTT 3'
Trim52mmu-miR-362-3pbeg:65end:84pic:3' ACTTAGGAACTTGTCCACACAA 5'& || | .|||||||| &5' -----CCAGGTGTAGGTGTGT- 3'
Trim52mmu-miR-329beg:67end:84pic:3' TTTTTCCAATCGACCCACACAA 5'& |||| ||||||| &5' ----AGGTGTA---GGTGTGT- 3'
Trim52mmu-miR-224beg:1603end:1615pic:3' TTGCCTTGGTGATCACTGAAT 5'& ||||||||| &5' ------------AGTGACTTA 3'
Trim52mmu-miR-183beg:106end:124pic:3' TCACTTAAGATGGTCACGGTAT 5'& ||||| .|||||||| &5' --TGAATG----TAGTGCCAT- 3'
Trim52mmu-miR-466ibeg:1482end:1493pic:3' ATCACACATACACACACACATA 5'& |||||||| &5' -------------TGTGTGTA- 3'
Trim52mcmv-miR-m01-3beg:1385end:1408pic:3' AGCTCC-GTTGTCAGCGAAGTGGC 5'& |||| .|| .|.|||||| &5' --GAGGATAAATG-TGTTTCACC- 3'
Trim52mcmv-miR-m107-1-5pbeg:1594end:1613pic:3' CCACTGAGCTCTGCTCACTGGC 5'& | ||.| | ||||||. &5' ---GCCTTGTTAAAAGTGACT- 3'
Trim52mcmv-miR-M23-2beg:314end:337pic:3' GGCGAACTGGCTC---CGGGGGTA 5'& |.||| || || |||||||| &5' --GTTTG-CCTAGCATGCCCCCAT 3'
Trim52mmu-miR-105beg:771end:792pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& || ||||. ||||.|||| &5' ---ACT-GCATTC-AGCATTTGG 3'
Trim52mmu-miR-1beg:181end:201pic:3' TATGTATGAAGAA-ATGTAAGGT 5'& |||| ||||||.|| &5' ------ACTTATAGTACATTTCA 3'
Trim52mmu-miR-1190beg:517end:538pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& |||| . |.|||||| &5' ----GAGGTTGTTATTAGCTGA 3'
Trim52mmu-miR-127starbeg:361end:382pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |||| |..| ||.||.|| &5' ATCAAGGTTC----AGTTTTAG 3'
Trim52mmu-miR-132beg:1574end:1593pic:3' GCTGGTACCGACATCTGACAAT 5'& ||| | ||||||| &5' ------TGGAAGGAAACTGTTA 3'
Trim52mmu-miR-138starbeg:914end:929pic:3' GGGACCACAACACTTCATCGGC 5'& |||||||||||| &5' ------TGTTGTGAAGTA---- 3'
Trim52mmu-miR-139-3pbeg:1139end:1156pic:3' GAGGTTGTCCCGGCGCAGAGGT 5'& ||||| |||||.| &5' --CCAACTA------GTCTCTA 3'
Trim52mmu-miR-139-5pbeg:620end:642pic:3' GACCTCTGTG-CACGT--GACATCT 5'& |||| |||| ||||.|| &5' ------ACACTGTGCTATCTGTGGA 3'
Trim52mmu-miR-142-3pbeg:368end:392pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |.|| |||||||.|.||| &5' TTCAGTTT-TAGGAAATATTAC- 3'
Trim52mmu-miR-143beg:616end:637pic:3' CTCGATGT--CACGAAGTAGAGT 5'& || |||| ||||| |||| &5' -AGATACACTGTGCT--ATCT-- 3'
Trim52mmu-miR-145starbeg:363end:385pic:3' GTTCTT-GTCATAAAGGTCCTTA 5'& ||||. |||| |..||||| &5' CAAGGTTCAGT---TTTAGGAA- 3'
Trim52mmu-miR-145starbeg:408end:430pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||||. ||||| ..|||| &5' -GAGAATT-TATTTGTGGGAA- 3'
Trim52mmu-miR-146abeg:1532end:1555pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |..||| ||| |||||.| &5' --CTTATGTTTTTCTGTTCTTA 3'
Trim52mmu-miR-146abeg:1515end:1536pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |...|| |||||||.|| &5' -ATTTATTT--TTCAGTTTTC- 3'
Trim52mmu-miR-146bbeg:1532end:1555pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |.|||| ||| |||||.| &5' --CTTATGTTTTTCTGTTCTTA 3'
Trim52mmu-miR-146bbeg:1513end:1536pic:3' TCGGATACCTTAAGTCAAGAGT 5'& || |||||||.|| &5' -GCATTTATTTTTCAGTTTTC- 3'
Trim52mmu-miR-17beg:1084end:1110pic:3' GATGGACGTGACATT-CGTGAAAC 5'& |||.|| |.|||||| &5' -TACTTGAATATCATTGTACTTTG 3'
Trim52mmu-miR-181abeg:462end:483pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& .|. ||| |||||||| &5' ----GCTTTCAGAACTGAATGTT 3'
Trim52mmu-miR-181cbeg:462end:483pic:3' TGAGTGGCTGTCCA-ACTTACAA 5'& .|. ||| |||||||| &5' ----GCTTTCAGAACTGAATGTT 3'
Trim52mmu-miR-181dbeg:97end:116pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& |.|| ||. |||||||| &5' --CTACAAA-AAT-ATGAATGT- 3'
Trim52mmu-miR-181dbeg:462end:483pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .|. ||. |||||||| &5' ----GCTTTCAGAACTGAATGTT 3'
Trim52mmu-miR-183beg:612end:634pic:3' TCACTTAAGATGGT-CACGGTAT 5'& || || ||| ||||.|| &5' -GTCAAGA-TACACTGTGCTAT- 3'
Trim52mmu-miR-1894-5pbeg:213end:229pic:3' TCTCCGTCCACCATCCCCTCTC 5'& ||| ||||||. &5' -----CAGTTTT--GGGGAGG- 3'
Trim52mmu-miR-190bbeg:1143end:1165pic:3' TTGGGTTATAGTTT-GTATAGT 5'& |.|.| || ||||||| &5' ---CTAGTCTCTATTCATATCA 3'
Trim52mmu-miR-1944beg:853end:872pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& |||| |||||| &5' ---------TTGAAACTTT-CACAGA- 3'
Trim52mmu-miR-1948beg:307end:326pic:3' GACATGCTCACGAGACGGATTT 5'& | |.|| || |.||||||. &5' --GAATGATTG-TTTGCCTAG- 3'
Trim52mmu-miR-1948beg:437end:451pic:3' GACATGCTCACGAGACGGATTT 5'& ||||.|||.||. &5' ---------TGCTTTGCTTAG- 3'
Trim52mmu-miR-1950beg:1492end:1508pic:3' ACTGGTATAGGAATCTACGTCT 5'& |.||| ||||||| &5' ---------CTTTAAATGCAGA 3'
Trim52mmu-miR-195beg:391end:405pic:3' CGGTTATAAAGACACGACGAT 5'& || ||.||||| &5' ----------CTTTGTTGCTA 3'
Trim52mmu-miR-1953beg:1119end:1141pic:3' GTCTTCGGACTCT---TGAAAGGGT 5'& |||| |||||||. &5' -----GCCTCTATCATACTTTCCT- 3'
Trim52mmu-miR-1957beg:1081end:1103pic:3' CAGTAT--ACGAGATGGTGAC 5'& ||||| || ||.||.|| &5' -TCATACTTGAA-TATCATTG 3'
Trim52mmu-miR-1958beg:1119end:1141pic:3' TGAATGACGAAGG-----TGAAAGGAT 5'& || ||. |||||||| &5' -------GCCTCTATCATACTTTCCT- 3'
Trim52mmu-miR-196abeg:425end:445pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |||.| |||||.|.| &5' ---AACGAAGA-AAACTGCTT- 3'
Trim52mmu-miR-196abeg:977end:997pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |. |.|| |||.|.|||| &5' -CTTATAA----AAATTGCCTA 3'
Trim52mmu-miR-1981beg:1400end:1423pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& .||| || |.||||..||||| &5' -TCAC--CTT-GTCCAGTTTTTAC 3'
Trim52mmu-miR-19astarbeg:0end:14pic:3' CATCACGTTGATACGTTTTGAT 5'& |.|| ||||||.|| &5' -------AGCT-TGCAAAGCT- 3'
Trim52mmu-miR-19astarbeg:923end:943pic:3' CATCACGTTGATA-CGTTTTGAT 5'& |.| .|| |||||||| &5' -----GTATTTAAAGCAAAACT- 3'
Trim52mmu-miR-201beg:1264end:1287pic:3' TTCTTGTTACGGAATGACTCAT 5'& |||.| |..|| |||.||| &5' -AGAGCCTCGTTTTCCTGGGTA 3'
Trim52mmu-miR-20bbeg:1086end:1110pic:3' GATGGACGTGATACT--CGTGAAAC 5'& |||.|| ||| |.|||||| &5' -TACTTGAA-TATCATTGTACTTTG 3'
Trim52mmu-miR-212beg:1573end:1593pic:3' ACCGGCACTGACCTCTGACAAT 5'& |.| || ||| ||||||| &5' ---CTG-GAA-GGAAACTGTTA 3'
Trim52mmu-miR-22starbeg:656end:690pic:3' ATTTCG--AACGGTGA----------CTTCTTGA 5'& |.|. |||.|||| ||||||. &5' --AGGTTTTTGTCACTATAAGCTAAGGAAGAAT- 3'
Trim52mmu-miR-24-2starbeg:881end:903pic:3' TGACAAAGTCGAGTCATCCGTG 5'& ||| ||||||||| &5' -CTGAAAATGG-CAGTAGGCA- 3'
Trim52mmu-miR-26abeg:1076end:1095pic:3' TCGGATAGGACCTA----ATGAACTT 5'& ||.| |||||||| &5' ----------GGGTTTCATACTTGAA 3'
Trim52mmu-miR-29bstarbeg:1001end:1018pic:3' ATTTGGTGGTATACTTTGGTCG 5'& . .||| .|||||| &5' ----TGGCCAA---GAACCAG- 3'
Trim52mmu-miR-29bstarbeg:935end:955pic:3' ATTTG-GTGGTATACTTTGGTCG 5'& |||| ..||| ||||||| &5' -AAACTTGCCA----AAACCAG- 3'
Trim52mmu-miR-301abeg:1087end:1107pic:3' CGAAACTGTTATGATAACGTGAC 5'& |||| |||. ||||.||| &5' ---TTGA--ATATCATTGTACT- 3'
Trim52mmu-miR-301bbeg:1503end:1521pic:3' CGAAACTGTTATGGTAACGTGAC 5'& ||.| |||||||.| &5' -----GATATA--CATTGCATT- 3'
Trim52mmu-miR-302bbeg:771end:790pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||| .||| ||||.||. &5' --ACT---GCATTC-AGCATTTG 3'
Trim52mmu-miR-302dbeg:1501end:1523pic:3' TGTGAGTTTGTACCTT-CGTGAAT 5'& ||.|.|| |||.||| &5' -----CAGATATACATTGCATTTA 3'
Trim52mmu-miR-30abeg:951end:975pic:3' GAAGGTCAGC---TCC---TACAAATGT 5'& ||| ||| |||||||| &5' ----CAGGTATATAGGTATATGTTTAC- 3'
Trim52mmu-miR-30bbeg:957end:975pic:3' TCGACTCACATCC---TACAAATGT 5'& |||| |||||||| &5' ---------TAGGTATATGTTTAC- 3'
Trim52mmu-miR-30cbeg:957end:975pic:3' CGACTCTCACATCC---TACAAATGT 5'& |||| |||||||| &5' ----------TAGGTATATGTTTAC- 3'
Trim52mmu-miR-30c-2starbeg:1131end:1145pic:3' TCTCATTTGTCGGAA-GAGGGTC 5'& |.|| |||||| &5' -----------CTTTCCTCCCA- 3'
Trim52mmu-miR-30dbeg:959end:975pic:3' GAAGGTCAGCCCC-TACAAATGT 5'& || |||||||| &5' ---------GGTATATGTTTAC- 3'
Trim52mmu-miR-320beg:1403end:1421pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& |||. .||||.|||| &5' ----CCTTG---TCCAGTTTTT 3'
Trim52mmu-miR-325beg:291end:303pic:3' AACTATCCTCCACGAGTTATTT 5'& |||||.||. &5' ------------GCTCAGTAG- 3'
Trim52mmu-miR-330starbeg:437end:448pic:3' AGAGACGTCCGGGACACGAAACG 5'& |||||||| &5' ---------------TGCTTTGC 3'
Trim52mmu-miR-330starbeg:631end:650pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||||. || ||||||| &5' --TCTGT-GGAT---TGCTTTG- 3'
Trim52mmu-miR-330starbeg:1540end:1572pic:3' AGAGACGTCC-------GGGACACGAAACG 5'& |.||||. |||| |||||||. &5' TTTCTGTTCTTATTTTTCCCT-TGCTTTGT 3'
Trim52mmu-miR-335-5pbeg:695end:715pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||| |||||.|||| &5' ------TTCAGATTTGCTTTTGA 3'
Trim52mmu-miR-343beg:704end:726pic:3' AGACCCGTGTACT----TCCCTCT 5'& || ||| ||||||| &5' -----GCTTTTGAAGATAGGGAGA 3'
Trim52mmu-miR-345-3pbeg:357end:376pic:3' CAGAGGTCTGGGGA--TCAAGTCC 5'& |||. .|||||| &5' -------GACTATCAAGGTTCAG- 3'
Trim52mmu-miR-3471beg:1061end:1073pic:3' TTACGGAATGTCAACCTAGAGT 5'& |||||.||| &5' -------------TGGATTTCA 3'
Trim52mmu-miR-376astarbeg:548end:566pic:3' TGAGTATCTTCCTCTTAGATGG 5'& .|.|||| |||||||. &5' -TTTATAG-----GAATCTAT- 3'
Trim52mmu-miR-384-3pbeg:367end:385pic:3' TAACACTTGTTAAAGATCCTTA 5'& | ||. ||.|||||| &5' -----GTTCAG-TTTTAGGAA- 3'
Trim52mmu-miR-384-5pbeg:957end:975pic:3' TGTAACGGATCCTTA-ACAAATGT 5'& |||| ||||||| &5' --------TAGGTATATGTTTAC- 3'
Trim52mmu-miR-384-5pbeg:302end:322pic:3' TGTAACGGATCCTTAACAAATGT 5'& || .|||||||.| &5' -----GCAGAATGATTGTTTGC- 3'
Trim52mmu-miR-432beg:1287end:1312pic:3' GACGGGTGACTA--GATGAGGTTCT 5'& ||||.| |||.|.||||. &5' ---CCCATTCAATGCTATTTCAAGG 3'
Trim52mmu-miR-465a-3pbeg:78end:97pic:3' AGATGAATCTTTCCGGGACTAG 5'& |. |||| .||||.| &5' --TGTCTAGAT---TCCTGGT- 3'
Trim52mmu-miR-465a-5pbeg:247end:273pic:3' AGTGTAGTCACGGTA----AGATTTAT 5'& |||.|||||| |.||||| &5' ---CATTAGTGCCTGCAGCTTTAAAT- 3'
Trim52mmu-miR-465a-5pbeg:8end:27pic:3' AGTGTAGTCACGGTAAGATTTAT 5'& .| |||| |||||||| &5' --GCTT--GTGC---TCTAAATA 3'
Trim52mmu-miR-465b-3pbeg:78end:97pic:3' AGATGAATCTTTCCGGGACTAG 5'& |. |||| .||||.| &5' --TGTCTAGAT---TCCTGGT- 3'
Trim52mmu-miR-465c-5pbeg:12end:27pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& |.|| |||||||| &5' -------GTGC---TCTAAATA 3'
Trim52mmu-miR-466gbeg:1339end:1356pic:3' ACACACACGTACACAGACATA 5'& ||| .|||||.|||| &5' -----GTG-GTGTGTTTGTA- 3'
Trim52mmu-miR-466lbeg:1339end:1356pic:3' TTATACACACGTACATAAATAT 5'& ||| .|||.|||.|| &5' -------GTG-GTGTGTTTGTA 3'
Trim52mmu-miR-467abeg:1500end:1523pic:3' GCGT--ATATGTACGTCCGTGAAT 5'& ||| ||||||| |||.||| &5' -GCAGATATACATT---GCATTTA 3'
Trim52mmu-miR-467bbeg:1504end:1524pic:3' GTATATGTACGTCCGTGAATG 5'& |||||||| |||.|||. &5' -ATATACATT---GCATTTAT 3'
Trim52mmu-miR-467cbeg:1501end:1526pic:3' GTGTATATGT-ACGTGCGTGAAT 5'& || ||||||| ||||. .|.|| &5' CAGATATACATTGCATTTATTT- 3'
Trim52mmu-miR-470beg:1292end:1313pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |.||| |||.| |.||||.| &5' ATTCAA---TGCTATTTCAAGGA 3'
Trim52mmu-miR-486beg:539end:560pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& ||| | ||.|||| &5' ---GGGAACATACTTTATAGGA 3'
Trim52mmu-miR-488beg:713end:734pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||. .||.|. ||||||| &5' GATAGGGAGAT---CTTTCAA 3'
Trim52mmu-miR-488beg:842end:868pic:3' CTGGTTCTTTGT--CG--GAAAGTT 5'& ||. |||| | |||||| &5' -ACTTTGAAAAATTGAAACTTTCA- 3'
Trim52mmu-miR-490beg:645end:664pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& |||| .||.|||||| &5' -----TGGAAATCTTCAGGTT- 3'
Trim52mmu-miR-491beg:1267end:1296pic:3' GGAGTACCTT--CCCA--AGGGGTGA 5'& ||||.| |||| ||||||.| &5' CCTCGTTTTCCTGGGTAGTCCCCATT 3'
Trim52mmu-miR-496beg:490end:510pic:3' CTCTAACCGGT-ACATTATGAGT 5'& |||. || ||||||.| &5' -----TGGTATTTG-AATACTTA 3'
Trim52mmu-miR-501-5pbeg:1190end:1212pic:3' AAAGTGGGTCCCT-GTTTCCTAA 5'& .||.| .|||||||| &5' ----GCCTAAATTCTAAAGGATT 3'
Trim52mmu-miR-503beg:383end:405pic:3' GACGTCATGACAAGGG--CGACGAT 5'& ||.| |||. |.||||| &5' ------TATTACTCCTTTGTTGCTA 3'
Trim52mmu-miR-503starbeg:1306end:1329pic:3' GGTCCGTCACCTTTGTTATGAG 5'& ||| |||.||||.|| &5' --AGGAAACAAAAATAATATTC 3'
Trim52mmu-miR-505beg:54end:81pic:3' TCTTTTGGTCG--TTCACAACTGC 5'& |||||| ||| |.|||| | | &5' AGAAAAAAAGCCCAGGTGTAGGTG 3'
Trim52mmu-miR-542-3pbeg:653end:672pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||| |.|||||| &5' -TTCAGGTT----TTTGTCAC- 3'
Trim52mmu-miR-542-5pbeg:867end:888pic:3' AGCACTGTAC--TACTAGGGGCTC 5'& || .||. |||.|| &5' ----GAAATTCAGTGG-CCCTGA- 3'
Trim52mmu-miR-652beg:111end:125pic:3' GTGTTGGGATCACCGCGGTAA 5'& || |.|||||| &5' ----------GTAGTGCCATT 3'
Trim52mmu-miR-654-3pbeg:1500end:1512pic:3' TTCCACTACCAGTCGTCTGTAT 5'& |||||.||| &5' -------------GCAGATATA 3'
Trim52mmu-miR-654-5pbeg:932end:948pic:3' TGTGTACAAGACGTC--GAATGGT 5'& ||| |||.||| &5' -----------GCAAAACTTGCCA 3'
Trim52mmu-miR-665beg:1264end:1284pic:3' TCCCTGGAGTCGGAGGACCA 5'& | ||||. ..|||||| &5' --GAGCCTCGTTTTCCTGG- 3'
Trim52mmu-miR-665beg:75end:97pic:3' TCCCTGGAG-TCGGAGGACCA 5'& ||| . || || .||||||| &5' AGGTGTGTCTAGATTCCTGGT 3'
Trim52mmu-miR-666-5pbeg:244end:263pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |.|||. |||||.|| &5' ---TTTCATTA--GTGCCTGC- 3'
Trim52mmu-miR-669jbeg:952end:971pic:3' ACAAACGTACACTCATATACGT 5'& |.|| | |||||||. &5' -----GTATATAGGTATATGT- 3'
Trim52mmu-miR-671-3pbeg:1372end:1393pic:3' CCACC-TCGGGACTCTTGGCCT 5'& |||| |||..||||| ||| &5' -GTGGTAGCTTTGAGA---GGA 3'
Trim52mmu-miR-673-3pbeg:24end:42pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& || .||| |||.||| &5' --TGA--GGAAA----CCCTGGA 3'
Trim52mmu-miR-674beg:862end:881pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .||| .|||||| &5' ----TCACAGAAA-TTCAGTG- 3'
Trim52mmu-miR-684beg:823end:840pic:3' AACTGAACTTC-CCTTTTGA 5'& ||||| ||||||. &5' -----TTGAAATGGAAAAT- 3'
Trim52mmu-miR-694beg:465end:487pic:3' GAAGTCCG---TTGTAAAAGTC 5'& ||||| ||..|||||| &5' -TTCAGAACTGAATGTTTTCA- 3'
Trim52mmu-miR-698beg:1575end:1596pic:3' TCCCTTCCTTTG-CTCTTAC 5'& |||||||||| | |||| &5' --GGAAGGAAACTGTTAATG 3'
Trim52mmu-miR-703beg:1065end:1085pic:3' AAGAAAGGAAGACTTCCAAAA 5'& |||| |||.||||| &5' ---TTTCATTATGAGGGTTT- 3'
Trim52mmu-miR-708beg:738end:760pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.|.||| |||.||||| &5' ----GTTGGATCTAAAGTTCCTT 3'
Trim52mmu-miR-713beg:198end:211pic:3' CGACACACGGAAGTCACGT 5'& |.| ||||||| &5' -------GTC-TCAGTGC- 3'
Trim52mmu-miR-713beg:1481end:1506pic:3' CGACACACG---GAAGTC-ACGT 5'& .||||||. |||.| |||| &5' -TTGTGTGTAAACTTTAAATGCA 3'
Trim52mmu-miR-743abeg:1525end:1547pic:3' AGATGAGTCGAACC---ACAGAAAG 5'& .||||.|| |||.|||| &5' ----TTCAGTTTTCTTATGTTTTTC 3'
Trim52mmu-miR-743b-3pbeg:1525end:1547pic:3' AGATAAGTCGTAC---TACAGAAAG 5'& |||||. ||||.|||| &5' ----TTCAGTTTTCTTATGTTTTTC 3'
Trim52mmu-miR-760beg:1256end:1272pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||||. ..|||||| &5' TCCCT------TTAGAGCC- 3'
Trim52mmu-miR-871beg:483end:506pic:3' GTACT--GACCGTGATTAGACTTAT 5'& ||||| ||||. ||.|||||| &5' CATGAGCCTGGT----ATTTGAATA 3'
Trim52mmu-miR-872starbeg:555end:577pic:3' TCCTCCGATGACGTTATCAAGT 5'& |||| |||. ||||||||. &5' AGGAATCTATGTCAATAGTTT- 3'
Trim52mmu-miR-872starbeg:679end:702pic:3' TCCTCCGATGACGTTATCAAGT 5'& |||| | ||| ||||||| &5' AGGAAGAATATGCT-TAGTTCA 3'
Trim52mmu-miR-875-3pbeg:574end:599pic:3' GTATCGG---AGTCATAAAAGTCC 5'& .||||. |||| |||||.|| &5' TATAGTAATGTCAG-ATTTTTAG- 3'
Trim52mmu-miR-875-5pbeg:947end:968pic:3' GTGGACTATTTTGACTCCATAT 5'& ||| |.|| ||||||| &5' -ACCAGGTATAT---AGGTATA 3'
Trim52mmu-miR-876-5pbeg:639end:657pic:3' ATCACTAAGTGTC-TCTTTAGGT 5'& |||| .| .||||||. &5' ----GATT-GCTTTGGAAATCT- 3'
Trim52mmu-miR-883a-5pbeg:282end:302pic:3' CATTGACGATGAAGAGAGTCGT 5'& .|| ||.|| |||||.| &5' ----TTG-TATTTAGCTCAGTA 3'
Trim52mmu-miR-883b-5pbeg:281end:302pic:3' ACTGACGATGGGTAAGAGTCAT 5'& | .|| ||...| ||||||| &5' -G-TTG-TATTTAG-CTCAGTA 3'
Trim52mmu-miR-883b-5pbeg:194end:210pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ..|| |||||||. &5' ---------TTCAGTCTCAGTG 3'
Trim52mmu-miR-883b-5pbeg:34end:53pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||| .|.| .|||||| &5' ---CTGGAGCTC---TTCAGTA 3'
Trim52mmu-miR-93starbeg:288end:304pic:3' GCCCTTCACGATCGAGTCGTCA 5'& .||||||||.||| &5' ---------TTAGCTCAGTAGT 3'
Trim52mmu-miR-96beg:3end:25pic:3' TCGTTTTT-ACACGATCACGGTTT 5'& |||||. |||||| |.||| &5' -GCAAAGCTTGTGCT----CTAAA 3'
Trim52mmu-miR-181bbeg:466end:483pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& ||| |||||||| &5' ---------CAGAACTGAATGTT 3'
Trim52mmu-miR-1948beg:987end:998pic:3' GACATGCTCACGAGACGGATTT 5'& .||||||| &5' -------------TTGCCTAA- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Trim52RAID00013736mmu-miR-6927-3pmiRNAMIMAT0027755Trim52mRNA212085Prediction0.1828
Trim52RAID00063784mmu-miR-30a-5pmiRNAMIMAT0000128Trim52mRNA212085Prediction0.1828
Trim52RAID00078215mmu-miR-410-3pmiRNAMIMAT0001091Trim52mRNA212085Prediction0.1828
Trim52RAID00130117mmu-miR-21cmiRNAMIMAT0025148Trim52mRNA212085Prediction0.1828
Trim52RAID00161523mmu-miR-6481miRNAMIMAT0027339Trim52mRNA212085Prediction0.1828
Trim52RAID00162784mmu-miR-6976-5pmiRNAMIMAT0027854Trim52mRNA212085Prediction0.1828
Trim52RAID00226137mmu-miR-1948-3pmiRNAMIMAT0009415Trim52mRNA212085Prediction0.1828
Trim52RAID00288882mmu-miR-181c-5pmiRNAMIMAT0000674Trim52mRNA212085Prediction0.1828
Trim52RAID00310440mmu-miR-190a-5pmiRNAMIMAT0000220Trim52mRNA212085Prediction0.1828
Trim52RAID00321317mmu-miR-145a-5pmiRNAMIMAT0000157Trim52mRNA212085Prediction0.2202
Trim52RAID00322029mmu-miR-5617-3pmiRNAMIMAT0022362Trim52mRNA212085Prediction0.1828
Trim52RAID00397371mmu-miR-182-5pmiRNAMIMAT0000211Trim52mRNA212085Prediction0.2202
Trim52RAID00469487mmu-miR-30c-5pmiRNAMIMAT0000514Trim52mRNA212085Prediction0.1828
Trim52RAID00484711mmu-miR-129-5pmiRNAMIMAT0000209Trim52mRNA212085Prediction0.1828
Trim52RAID00534835mmu-miR-499-5pmiRNAMIMAT0003482Trim52mRNA212085Prediction0.1828
Trim52RAID00563193mmu-miR-7227-3pmiRNAMIMAT0028423Trim52mRNA212085Prediction0.1828
Trim52RAID00603066mmu-miR-6946-5pmiRNAMIMAT0027792Trim52mRNA212085Prediction0.1828
Trim52RAID00646000mmu-miR-1894-3pmiRNAMIMAT0007878Trim52mRNA212085Prediction0.1828
Trim52RAID00673284mmu-miR-384-5pmiRNAMIMAT0004745Trim52mRNA212085Prediction0.1828
Trim52RAID00712818mmu-miR-128-3pmiRNAMIMAT0000140Trim52mRNA212085Prediction0.1828
Trim52RAID00889780mmu-miR-216c-5pmiRNAMIMAT0029888Trim52mRNA212085Prediction0.1828
Trim52RAID00896340mmu-miR-669b-5pmiRNAMIMAT0003476Trim52mRNA212085Prediction0.1828
Trim52RAID00914759mmu-miR-181a-5pmiRNAMIMAT0000210Trim52mRNA212085Prediction0.1828
Trim52RAID00928320mmu-miR-875-3pmiRNAMIMAT0004938Trim52mRNA212085Prediction0.1828
Trim52RAID00977143mmu-miR-224-5pmiRNAMIMAT0000671Trim52mRNA212085Prediction0.1828
Trim52RAID01000677mmu-miR-362-3pmiRNAMIMAT0004684Trim52mRNA212085Prediction0.1828
Trim52RAID01239301mmu-miR-21a-5pmiRNAMIMAT0000530Trim52mRNA212085Prediction0.2202
Trim52RAID01240395mmu-miR-223-3pmiRNAMIMAT0000665Trim52mRNA212085Prediction0.1828
Trim52RAID01285108mmu-miR-181b-5pmiRNAMIMAT0000673Trim52mRNA212085Prediction0.1828
Trim52RAID01287880mmu-miR-330-3pmiRNAMIMAT0000569Trim52mRNA212085Prediction0.1828
Trim52RAID01425077mmu-miR-26b-5pmiRNAMIMAT0000534Trim52mRNA212085Prediction0.1828
Trim52RAID01515616mmu-miR-6945-3pmiRNAMIMAT0027791Trim52mRNA212085Prediction0.1828
Trim52RAID01564003mmu-miR-6929-5pmiRNAMIMAT0027758Trim52mRNA212085Prediction0.1828
Trim52RAID01610941mmu-miR-224-3pmiRNAMIMAT0017062Trim52mRNA212085Prediction0.1828
Trim52RAID01657213mmu-miR-7074-5pmiRNAMIMAT0028054Trim52mRNA212085Prediction0.1828
Trim52RAID01657814mmu-miR-590-5pmiRNAMIMAT0004895Trim52mRNA212085Prediction0.2202
Trim52RAID01706263mmu-miR-375-3pmiRNAMIMAT0000739Trim52mRNA212085Prediction0.1828
Trim52RAID01726452mmu-miR-200b-3pmiRNAMIMAT0000233Trim52mRNA212085Prediction0.1828
Trim52RAID01764083mmu-miR-3065-5pmiRNAMIMAT0014836Trim52mRNA212085Prediction0.1828
Trim52RAID01850970mmu-miR-181d-5pmiRNAMIMAT0004324Trim52mRNA212085Prediction0.1828
Trim52RAID01874352mmu-miR-6345miRNAMIMAT0025088Trim52mRNA212085Prediction0.1828
Trim52RAID01971335mmu-miR-7119-3pmiRNAMIMAT0028136Trim52mRNA212085Prediction0.1828
Trim52RAID01990200mmu-miR-592-5pmiRNAMIMAT0003730Trim52mRNA212085Prediction0.1828
Trim52RAID02020104mmu-miR-6902-3pmiRNAMIMAT0027705Trim52mRNA212085Prediction0.1828
Trim52RAID02033312mmu-miR-30e-5pmiRNAMIMAT0000248Trim52mRNA212085Prediction0.1828
Trim52RAID02085768mmu-miR-188-3pmiRNAMIMAT0004541Trim52mRNA212085Prediction0.1828
Trim52RAID02099192mmu-miR-376c-3pmiRNAMIMAT0003183Trim52mRNA212085Prediction0.1828
Trim52RAID02099620mmu-miR-30b-5pmiRNAMIMAT0000130Trim52mRNA212085Prediction0.1828
Trim52RAID02159018mmu-miR-543-3pmiRNAMIMAT0003168Trim52mRNA212085Prediction0.1828
Trim52RAID02198872mmu-miR-6357miRNAMIMAT0025100Trim52mRNA212085Prediction0.1828
Trim52RAID02238648mmu-miR-1982-5pmiRNAMIMAT0009459Trim52mRNA212085Prediction0.1828
Trim52RAID02252702mmu-miR-7069-5pmiRNAMIMAT0028044Trim52mRNA212085Prediction0.1828
Trim52RAID02292898mmu-miR-296-3pmiRNAMIMAT0004576Trim52mRNA212085Prediction0.2202
Trim52RAID02313567mmu-miR-143-3pmiRNAMIMAT0000247Trim52mRNA212085Prediction0.1828
Trim52RAID02337235mmu-miR-7215-5pmiRNAMIMAT0028398Trim52mRNA212085Prediction0.1828
Trim52RAID02364277mmu-miR-6240miRNAMIMAT0024861Trim52mRNA212085Prediction0.1828
Trim52RAID02376572mmu-miR-20a-3pmiRNAMIMAT0004627Trim52mRNA212085Prediction0.1828
Trim52RAID02446279mmu-miR-26a-5pmiRNAMIMAT0000533Trim52mRNA212085Prediction0.1828
Trim52RAID02598968mmu-miR-6933-5pmiRNAMIMAT0027766Trim52mRNA212085Prediction0.1828
Trim52RAID02756563mmu-miR-127-5pmiRNAMIMAT0004530Trim52mRNA212085Prediction0.1828
Trim52RAID02835182mmu-miR-7665-5pmiRNAMIMAT0029836Trim52mRNA212085Prediction0.1828
Trim52RAID02850953mmu-miR-200c-3pmiRNAMIMAT0000657Trim52mRNA212085Prediction0.1828
Trim52RAID02987478mmu-miR-1955-3pmiRNAMIMAT0017348Trim52mRNA212085Prediction0.1828
Trim52RAID03075399mmu-miR-340-5pmiRNAMIMAT0004651Trim52mRNA212085Prediction0.1828
Trim52RAID03159690mmu-miR-329-3pmiRNAMIMAT0000567Trim52mRNA212085Prediction0.1828
Trim52RAID03163746mmu-miR-544-3pmiRNAMIMAT0004941Trim52mRNA212085Prediction0.1828
Trim52RAID03252597mmu-miR-374b-5pmiRNAMIMAT0003727Trim52mRNA212085Prediction0.1828
Trim52RAID03356062mmu-miR-429-3pmiRNAMIMAT0001537Trim52mRNA212085Prediction0.1828
Trim52RAID03405365mmu-miR-320-3pmiRNAMIMAT0000666Trim52mRNA212085Prediction0.1828
Trim52RAID03483699mmu-miR-183-5pmiRNAMIMAT0000212Trim52mRNA212085Prediction0.1828
Trim52RAID03504283mmu-miR-30d-5pmiRNAMIMAT0000515Trim52mRNA212085Prediction0.1828
Trim52RAID03615432mmu-miR-203-3pmiRNAMIMAT0000236Trim52mRNA212085Prediction0.1828
Trim52RAID03732834mmu-miR-692miRNAMIMAT0003471Trim52mRNA212085Prediction0.1828
Trim52RAID04005979mmu-miR-145bmiRNAMIMAT0025105Trim52mRNA212085Prediction0.1828