DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Trim52 | mmu-miR-692 | beg:1468 | end:1481 | pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||.||||||| &5' ----------CTTAAAGAGA- 3' |
Trim52 | mmu-miR-692 | beg:758 | end:774 | pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |. |.||||||| &5' -------GTCATTAAAGAGA- 3' |
Trim52 | mmu-miR-20astar | beg:1492 | end:1507 | pic:3' GAAATTCACGAGCATTACGTCA 5'& ||. ||||||| &5' ---------CTTTAAATGCAG- 3' |
Trim52 | mmu-miR-1904 | beg:292 | end:312 | pic:3' GGAGGGAGGTC-TCCTCGTCTTG 5'& || ||| || |||||||. &5' -----CT-CAGTAGTAGCAGAAT 3' |
Trim52 | mmu-miR-127star | beg:438 | end:457 | pic:3' TAGTCTCGGGA-GACTCGAAGTC 5'& ||..| || ||||||| &5' ------GCTTTGCTTAGCTTCA- 3' |
Trim52 | mmu-miR-499 | beg:1437 | end:1455 | pic:3' TTTGTAGTGAC--GTTCAGAATT 5'& |||| .|||||||| &5' -------ACTGGATAAGTCTTA- 3' |
Trim52 | mmu-miR-345-3p | beg:687 | end:703 | pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& |. |.|||||||| &5' --------ATGCTTAGTTCAG- 3' |
Trim52 | mmu-miR-21 | beg:664 | end:681 | pic:3' AGTTGTAGTCAGAC-TATTCGAT 5'& ||| |||||||| &5' ---------GTCACTATAAGCTA 3' |
Trim52 | mmu-miR-296-3p | beg:1233 | end:1251 | pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& |.|.| . ||||||| &5' ------CTTTCTTGCAACCCT- 3' |
Trim52 | mmu-miR-128 | beg:616 | end:630 | pic:3' TTTCTCTGGCCAAGTGACACT 5'& |||. ||||||| &5' ----AGATA----CACTGTG- 3' |
Trim52 | mmu-miR-203 | beg:182 | end:201 | pic:3' GATCACCAGGATT---TGTAAAGTG 5'& |.|| |||||||| &5' --------CTTATAGTACATTTCA- 3' |
Trim52 | mmu-miR-674 | beg:191 | end:211 | pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||.|.| .||||||||| &5' -----CATTTCAGTCTCAGTGC 3' |
Trim52 | mmu-miR-666-3p | beg:254 | end:267 | pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& .| |||||||. &5' -----------GC-CTGCAGCT 3' |
Trim52 | mmu-miR-130bstar | beg:271 | end:283 | pic:3' TCATCACGTTGTCCCTTTCTCA 5'& ||||||||| &5' -------------GGAAAGAGT 3' |
Trim52 | mmu-miR-484 | beg:484 | end:495 | pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||||||||. &5' -------------TGAGCCTGG 3' |
Trim52 | mmu-miR-362-3p | beg:1333 | end:1352 | pic:3' ACTTAGGAA-CTTGTCCACACAA 5'& |.|| |. |||||||| &5' -----CTTTAGGT--GGTGTGTT 3' |
Trim52 | mmu-miR-329 | beg:1335 | end:1352 | pic:3' TTTTTCCAATCGACCCACACAA 5'& |||| | |||||||| &5' -------TTAGGT-GGTGTGTT 3' |
Trim52 | mmu-miR-362-3p | beg:65 | end:84 | pic:3' ACTTAGGAACTTGTCCACACAA 5'& || | .|||||||| &5' -----CCAGGTGTAGGTGTGT- 3' |
Trim52 | mmu-miR-329 | beg:67 | end:84 | pic:3' TTTTTCCAATCGACCCACACAA 5'& |||| ||||||| &5' ----AGGTGTA---GGTGTGT- 3' |
Trim52 | mmu-miR-224 | beg:1603 | end:1615 | pic:3' TTGCCTTGGTGATCACTGAAT 5'& ||||||||| &5' ------------AGTGACTTA 3' |
Trim52 | mmu-miR-183 | beg:106 | end:124 | pic:3' TCACTTAAGATGGTCACGGTAT 5'& ||||| .|||||||| &5' --TGAATG----TAGTGCCAT- 3' |
Trim52 | mmu-miR-466i | beg:1482 | end:1493 | pic:3' ATCACACATACACACACACATA 5'& |||||||| &5' -------------TGTGTGTA- 3' |
Trim52 | mcmv-miR-m01-3 | beg:1385 | end:1408 | pic:3' AGCTCC-GTTGTCAGCGAAGTGGC 5'& |||| .|| .|.|||||| &5' --GAGGATAAATG-TGTTTCACC- 3' |
Trim52 | mcmv-miR-m107-1-5p | beg:1594 | end:1613 | pic:3' CCACTGAGCTCTGCTCACTGGC 5'& | ||.| | ||||||. &5' ---GCCTTGTTAAAAGTGACT- 3' |
Trim52 | mcmv-miR-M23-2 | beg:314 | end:337 | pic:3' GGCGAACTGGCTC---CGGGGGTA 5'& |.||| || || |||||||| &5' --GTTTG-CCTAGCATGCCCCCAT 3' |
Trim52 | mmu-miR-105 | beg:771 | end:792 | pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& || ||||. ||||.|||| &5' ---ACT-GCATTC-AGCATTTGG 3' |
Trim52 | mmu-miR-1 | beg:181 | end:201 | pic:3' TATGTATGAAGAA-ATGTAAGGT 5'& |||| ||||||.|| &5' ------ACTTATAGTACATTTCA 3' |
Trim52 | mmu-miR-1190 | beg:517 | end:538 | pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& |||| . |.|||||| &5' ----GAGGTTGTTATTAGCTGA 3' |
Trim52 | mmu-miR-127star | beg:361 | end:382 | pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |||| |..| ||.||.|| &5' ATCAAGGTTC----AGTTTTAG 3' |
Trim52 | mmu-miR-132 | beg:1574 | end:1593 | pic:3' GCTGGTACCGACATCTGACAAT 5'& ||| | ||||||| &5' ------TGGAAGGAAACTGTTA 3' |
Trim52 | mmu-miR-138star | beg:914 | end:929 | pic:3' GGGACCACAACACTTCATCGGC 5'& |||||||||||| &5' ------TGTTGTGAAGTA---- 3' |
Trim52 | mmu-miR-139-3p | beg:1139 | end:1156 | pic:3' GAGGTTGTCCCGGCGCAGAGGT 5'& ||||| |||||.| &5' --CCAACTA------GTCTCTA 3' |
Trim52 | mmu-miR-139-5p | beg:620 | end:642 | pic:3' GACCTCTGTG-CACGT--GACATCT 5'& |||| |||| ||||.|| &5' ------ACACTGTGCTATCTGTGGA 3' |
Trim52 | mmu-miR-142-3p | beg:368 | end:392 | pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |.|| |||||||.|.||| &5' TTCAGTTT-TAGGAAATATTAC- 3' |
Trim52 | mmu-miR-143 | beg:616 | end:637 | pic:3' CTCGATGT--CACGAAGTAGAGT 5'& || |||| ||||| |||| &5' -AGATACACTGTGCT--ATCT-- 3' |
Trim52 | mmu-miR-145star | beg:363 | end:385 | pic:3' GTTCTT-GTCATAAAGGTCCTTA 5'& ||||. |||| |..||||| &5' CAAGGTTCAGT---TTTAGGAA- 3' |
Trim52 | mmu-miR-145star | beg:408 | end:430 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||||. ||||| ..|||| &5' -GAGAATT-TATTTGTGGGAA- 3' |
Trim52 | mmu-miR-146a | beg:1532 | end:1555 | pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |..||| ||| |||||.| &5' --CTTATGTTTTTCTGTTCTTA 3' |
Trim52 | mmu-miR-146a | beg:1515 | end:1536 | pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |...|| |||||||.|| &5' -ATTTATTT--TTCAGTTTTC- 3' |
Trim52 | mmu-miR-146b | beg:1532 | end:1555 | pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |.|||| ||| |||||.| &5' --CTTATGTTTTTCTGTTCTTA 3' |
Trim52 | mmu-miR-146b | beg:1513 | end:1536 | pic:3' TCGGATACCTTAAGTCAAGAGT 5'& || |||||||.|| &5' -GCATTTATTTTTCAGTTTTC- 3' |
Trim52 | mmu-miR-17 | beg:1084 | end:1110 | pic:3' GATGGACGTGACATT-CGTGAAAC 5'& |||.|| |.|||||| &5' -TACTTGAATATCATTGTACTTTG 3' |
Trim52 | mmu-miR-181a | beg:462 | end:483 | pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& .|. ||| |||||||| &5' ----GCTTTCAGAACTGAATGTT 3' |
Trim52 | mmu-miR-181c | beg:462 | end:483 | pic:3' TGAGTGGCTGTCCA-ACTTACAA 5'& .|. ||| |||||||| &5' ----GCTTTCAGAACTGAATGTT 3' |
Trim52 | mmu-miR-181d | beg:97 | end:116 | pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& |.|| ||. |||||||| &5' --CTACAAA-AAT-ATGAATGT- 3' |
Trim52 | mmu-miR-181d | beg:462 | end:483 | pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .|. ||. |||||||| &5' ----GCTTTCAGAACTGAATGTT 3' |
Trim52 | mmu-miR-183 | beg:612 | end:634 | pic:3' TCACTTAAGATGGT-CACGGTAT 5'& || || ||| ||||.|| &5' -GTCAAGA-TACACTGTGCTAT- 3' |
Trim52 | mmu-miR-1894-5p | beg:213 | end:229 | pic:3' TCTCCGTCCACCATCCCCTCTC 5'& ||| ||||||. &5' -----CAGTTTT--GGGGAGG- 3' |
Trim52 | mmu-miR-190b | beg:1143 | end:1165 | pic:3' TTGGGTTATAGTTT-GTATAGT 5'& |.|.| || ||||||| &5' ---CTAGTCTCTATTCATATCA 3' |
Trim52 | mmu-miR-1944 | beg:853 | end:872 | pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& |||| |||||| &5' ---------TTGAAACTTT-CACAGA- 3' |
Trim52 | mmu-miR-1948 | beg:307 | end:326 | pic:3' GACATGCTCACGAGACGGATTT 5'& | |.|| || |.||||||. &5' --GAATGATTG-TTTGCCTAG- 3' |
Trim52 | mmu-miR-1948 | beg:437 | end:451 | pic:3' GACATGCTCACGAGACGGATTT 5'& ||||.|||.||. &5' ---------TGCTTTGCTTAG- 3' |
Trim52 | mmu-miR-1950 | beg:1492 | end:1508 | pic:3' ACTGGTATAGGAATCTACGTCT 5'& |.||| ||||||| &5' ---------CTTTAAATGCAGA 3' |
Trim52 | mmu-miR-195 | beg:391 | end:405 | pic:3' CGGTTATAAAGACACGACGAT 5'& || ||.||||| &5' ----------CTTTGTTGCTA 3' |
Trim52 | mmu-miR-1953 | beg:1119 | end:1141 | pic:3' GTCTTCGGACTCT---TGAAAGGGT 5'& |||| |||||||. &5' -----GCCTCTATCATACTTTCCT- 3' |
Trim52 | mmu-miR-1957 | beg:1081 | end:1103 | pic:3' CAGTAT--ACGAGATGGTGAC 5'& ||||| || ||.||.|| &5' -TCATACTTGAA-TATCATTG 3' |
Trim52 | mmu-miR-1958 | beg:1119 | end:1141 | pic:3' TGAATGACGAAGG-----TGAAAGGAT 5'& || ||. |||||||| &5' -------GCCTCTATCATACTTTCCT- 3' |
Trim52 | mmu-miR-196a | beg:425 | end:445 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |||.| |||||.|.| &5' ---AACGAAGA-AAACTGCTT- 3' |
Trim52 | mmu-miR-196a | beg:977 | end:997 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |. |.|| |||.|.|||| &5' -CTTATAA----AAATTGCCTA 3' |
Trim52 | mmu-miR-1981 | beg:1400 | end:1423 | pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& .||| || |.||||..||||| &5' -TCAC--CTT-GTCCAGTTTTTAC 3' |
Trim52 | mmu-miR-19astar | beg:0 | end:14 | pic:3' CATCACGTTGATACGTTTTGAT 5'& |.|| ||||||.|| &5' -------AGCT-TGCAAAGCT- 3' |
Trim52 | mmu-miR-19astar | beg:923 | end:943 | pic:3' CATCACGTTGATA-CGTTTTGAT 5'& |.| .|| |||||||| &5' -----GTATTTAAAGCAAAACT- 3' |
Trim52 | mmu-miR-201 | beg:1264 | end:1287 | pic:3' TTCTTGTTACGGAATGACTCAT 5'& |||.| |..|| |||.||| &5' -AGAGCCTCGTTTTCCTGGGTA 3' |
Trim52 | mmu-miR-20b | beg:1086 | end:1110 | pic:3' GATGGACGTGATACT--CGTGAAAC 5'& |||.|| ||| |.|||||| &5' -TACTTGAA-TATCATTGTACTTTG 3' |
Trim52 | mmu-miR-212 | beg:1573 | end:1593 | pic:3' ACCGGCACTGACCTCTGACAAT 5'& |.| || ||| ||||||| &5' ---CTG-GAA-GGAAACTGTTA 3' |
Trim52 | mmu-miR-22star | beg:656 | end:690 | pic:3' ATTTCG--AACGGTGA----------CTTCTTGA 5'& |.|. |||.|||| ||||||. &5' --AGGTTTTTGTCACTATAAGCTAAGGAAGAAT- 3' |
Trim52 | mmu-miR-24-2star | beg:881 | end:903 | pic:3' TGACAAAGTCGAGTCATCCGTG 5'& ||| ||||||||| &5' -CTGAAAATGG-CAGTAGGCA- 3' |
Trim52 | mmu-miR-26a | beg:1076 | end:1095 | pic:3' TCGGATAGGACCTA----ATGAACTT 5'& ||.| |||||||| &5' ----------GGGTTTCATACTTGAA 3' |
Trim52 | mmu-miR-29bstar | beg:1001 | end:1018 | pic:3' ATTTGGTGGTATACTTTGGTCG 5'& . .||| .|||||| &5' ----TGGCCAA---GAACCAG- 3' |
Trim52 | mmu-miR-29bstar | beg:935 | end:955 | pic:3' ATTTG-GTGGTATACTTTGGTCG 5'& |||| ..||| ||||||| &5' -AAACTTGCCA----AAACCAG- 3' |
Trim52 | mmu-miR-301a | beg:1087 | end:1107 | pic:3' CGAAACTGTTATGATAACGTGAC 5'& |||| |||. ||||.||| &5' ---TTGA--ATATCATTGTACT- 3' |
Trim52 | mmu-miR-301b | beg:1503 | end:1521 | pic:3' CGAAACTGTTATGGTAACGTGAC 5'& ||.| |||||||.| &5' -----GATATA--CATTGCATT- 3' |
Trim52 | mmu-miR-302b | beg:771 | end:790 | pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||| .||| ||||.||. &5' --ACT---GCATTC-AGCATTTG 3' |
Trim52 | mmu-miR-302d | beg:1501 | end:1523 | pic:3' TGTGAGTTTGTACCTT-CGTGAAT 5'& ||.|.|| |||.||| &5' -----CAGATATACATTGCATTTA 3' |
Trim52 | mmu-miR-30a | beg:951 | end:975 | pic:3' GAAGGTCAGC---TCC---TACAAATGT 5'& ||| ||| |||||||| &5' ----CAGGTATATAGGTATATGTTTAC- 3' |
Trim52 | mmu-miR-30b | beg:957 | end:975 | pic:3' TCGACTCACATCC---TACAAATGT 5'& |||| |||||||| &5' ---------TAGGTATATGTTTAC- 3' |
Trim52 | mmu-miR-30c | beg:957 | end:975 | pic:3' CGACTCTCACATCC---TACAAATGT 5'& |||| |||||||| &5' ----------TAGGTATATGTTTAC- 3' |
Trim52 | mmu-miR-30c-2star | beg:1131 | end:1145 | pic:3' TCTCATTTGTCGGAA-GAGGGTC 5'& |.|| |||||| &5' -----------CTTTCCTCCCA- 3' |
Trim52 | mmu-miR-30d | beg:959 | end:975 | pic:3' GAAGGTCAGCCCC-TACAAATGT 5'& || |||||||| &5' ---------GGTATATGTTTAC- 3' |
Trim52 | mmu-miR-320 | beg:1403 | end:1421 | pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& |||. .||||.|||| &5' ----CCTTG---TCCAGTTTTT 3' |
Trim52 | mmu-miR-325 | beg:291 | end:303 | pic:3' AACTATCCTCCACGAGTTATTT 5'& |||||.||. &5' ------------GCTCAGTAG- 3' |
Trim52 | mmu-miR-330star | beg:437 | end:448 | pic:3' AGAGACGTCCGGGACACGAAACG 5'& |||||||| &5' ---------------TGCTTTGC 3' |
Trim52 | mmu-miR-330star | beg:631 | end:650 | pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||||. || ||||||| &5' --TCTGT-GGAT---TGCTTTG- 3' |
Trim52 | mmu-miR-330star | beg:1540 | end:1572 | pic:3' AGAGACGTCC-------GGGACACGAAACG 5'& |.||||. |||| |||||||. &5' TTTCTGTTCTTATTTTTCCCT-TGCTTTGT 3' |
Trim52 | mmu-miR-335-5p | beg:695 | end:715 | pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||| |||||.|||| &5' ------TTCAGATTTGCTTTTGA 3' |
Trim52 | mmu-miR-343 | beg:704 | end:726 | pic:3' AGACCCGTGTACT----TCCCTCT 5'& || ||| ||||||| &5' -----GCTTTTGAAGATAGGGAGA 3' |
Trim52 | mmu-miR-345-3p | beg:357 | end:376 | pic:3' CAGAGGTCTGGGGA--TCAAGTCC 5'& |||. .|||||| &5' -------GACTATCAAGGTTCAG- 3' |
Trim52 | mmu-miR-3471 | beg:1061 | end:1073 | pic:3' TTACGGAATGTCAACCTAGAGT 5'& |||||.||| &5' -------------TGGATTTCA 3' |
Trim52 | mmu-miR-376astar | beg:548 | end:566 | pic:3' TGAGTATCTTCCTCTTAGATGG 5'& .|.|||| |||||||. &5' -TTTATAG-----GAATCTAT- 3' |
Trim52 | mmu-miR-384-3p | beg:367 | end:385 | pic:3' TAACACTTGTTAAAGATCCTTA 5'& | ||. ||.|||||| &5' -----GTTCAG-TTTTAGGAA- 3' |
Trim52 | mmu-miR-384-5p | beg:957 | end:975 | pic:3' TGTAACGGATCCTTA-ACAAATGT 5'& |||| ||||||| &5' --------TAGGTATATGTTTAC- 3' |
Trim52 | mmu-miR-384-5p | beg:302 | end:322 | pic:3' TGTAACGGATCCTTAACAAATGT 5'& || .|||||||.| &5' -----GCAGAATGATTGTTTGC- 3' |
Trim52 | mmu-miR-432 | beg:1287 | end:1312 | pic:3' GACGGGTGACTA--GATGAGGTTCT 5'& ||||.| |||.|.||||. &5' ---CCCATTCAATGCTATTTCAAGG 3' |
Trim52 | mmu-miR-465a-3p | beg:78 | end:97 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& |. |||| .||||.| &5' --TGTCTAGAT---TCCTGGT- 3' |
Trim52 | mmu-miR-465a-5p | beg:247 | end:273 | pic:3' AGTGTAGTCACGGTA----AGATTTAT 5'& |||.|||||| |.||||| &5' ---CATTAGTGCCTGCAGCTTTAAAT- 3' |
Trim52 | mmu-miR-465a-5p | beg:8 | end:27 | pic:3' AGTGTAGTCACGGTAAGATTTAT 5'& .| |||| |||||||| &5' --GCTT--GTGC---TCTAAATA 3' |
Trim52 | mmu-miR-465b-3p | beg:78 | end:97 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& |. |||| .||||.| &5' --TGTCTAGAT---TCCTGGT- 3' |
Trim52 | mmu-miR-465c-5p | beg:12 | end:27 | pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& |.|| |||||||| &5' -------GTGC---TCTAAATA 3' |
Trim52 | mmu-miR-466g | beg:1339 | end:1356 | pic:3' ACACACACGTACACAGACATA 5'& ||| .|||||.|||| &5' -----GTG-GTGTGTTTGTA- 3' |
Trim52 | mmu-miR-466l | beg:1339 | end:1356 | pic:3' TTATACACACGTACATAAATAT 5'& ||| .|||.|||.|| &5' -------GTG-GTGTGTTTGTA 3' |
Trim52 | mmu-miR-467a | beg:1500 | end:1523 | pic:3' GCGT--ATATGTACGTCCGTGAAT 5'& ||| ||||||| |||.||| &5' -GCAGATATACATT---GCATTTA 3' |
Trim52 | mmu-miR-467b | beg:1504 | end:1524 | pic:3' GTATATGTACGTCCGTGAATG 5'& |||||||| |||.|||. &5' -ATATACATT---GCATTTAT 3' |
Trim52 | mmu-miR-467c | beg:1501 | end:1526 | pic:3' GTGTATATGT-ACGTGCGTGAAT 5'& || ||||||| ||||. .|.|| &5' CAGATATACATTGCATTTATTT- 3' |
Trim52 | mmu-miR-470 | beg:1292 | end:1313 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |.||| |||.| |.||||.| &5' ATTCAA---TGCTATTTCAAGGA 3' |
Trim52 | mmu-miR-486 | beg:539 | end:560 | pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& ||| | ||.|||| &5' ---GGGAACATACTTTATAGGA 3' |
Trim52 | mmu-miR-488 | beg:713 | end:734 | pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||. .||.|. ||||||| &5' GATAGGGAGAT---CTTTCAA 3' |
Trim52 | mmu-miR-488 | beg:842 | end:868 | pic:3' CTGGTTCTTTGT--CG--GAAAGTT 5'& ||. |||| | |||||| &5' -ACTTTGAAAAATTGAAACTTTCA- 3' |
Trim52 | mmu-miR-490 | beg:645 | end:664 | pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& |||| .||.|||||| &5' -----TGGAAATCTTCAGGTT- 3' |
Trim52 | mmu-miR-491 | beg:1267 | end:1296 | pic:3' GGAGTACCTT--CCCA--AGGGGTGA 5'& ||||.| |||| ||||||.| &5' CCTCGTTTTCCTGGGTAGTCCCCATT 3' |
Trim52 | mmu-miR-496 | beg:490 | end:510 | pic:3' CTCTAACCGGT-ACATTATGAGT 5'& |||. || ||||||.| &5' -----TGGTATTTG-AATACTTA 3' |
Trim52 | mmu-miR-501-5p | beg:1190 | end:1212 | pic:3' AAAGTGGGTCCCT-GTTTCCTAA 5'& .||.| .|||||||| &5' ----GCCTAAATTCTAAAGGATT 3' |
Trim52 | mmu-miR-503 | beg:383 | end:405 | pic:3' GACGTCATGACAAGGG--CGACGAT 5'& ||.| |||. |.||||| &5' ------TATTACTCCTTTGTTGCTA 3' |
Trim52 | mmu-miR-503star | beg:1306 | end:1329 | pic:3' GGTCCGTCACCTTTGTTATGAG 5'& ||| |||.||||.|| &5' --AGGAAACAAAAATAATATTC 3' |
Trim52 | mmu-miR-505 | beg:54 | end:81 | pic:3' TCTTTTGGTCG--TTCACAACTGC 5'& |||||| ||| |.|||| | | &5' AGAAAAAAAGCCCAGGTGTAGGTG 3' |
Trim52 | mmu-miR-542-3p | beg:653 | end:672 | pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||| |.|||||| &5' -TTCAGGTT----TTTGTCAC- 3' |
Trim52 | mmu-miR-542-5p | beg:867 | end:888 | pic:3' AGCACTGTAC--TACTAGGGGCTC 5'& || .||. |||.|| &5' ----GAAATTCAGTGG-CCCTGA- 3' |
Trim52 | mmu-miR-652 | beg:111 | end:125 | pic:3' GTGTTGGGATCACCGCGGTAA 5'& || |.|||||| &5' ----------GTAGTGCCATT 3' |
Trim52 | mmu-miR-654-3p | beg:1500 | end:1512 | pic:3' TTCCACTACCAGTCGTCTGTAT 5'& |||||.||| &5' -------------GCAGATATA 3' |
Trim52 | mmu-miR-654-5p | beg:932 | end:948 | pic:3' TGTGTACAAGACGTC--GAATGGT 5'& ||| |||.||| &5' -----------GCAAAACTTGCCA 3' |
Trim52 | mmu-miR-665 | beg:1264 | end:1284 | pic:3' TCCCTGGAGTCGGAGGACCA 5'& | ||||. ..|||||| &5' --GAGCCTCGTTTTCCTGG- 3' |
Trim52 | mmu-miR-665 | beg:75 | end:97 | pic:3' TCCCTGGAG-TCGGAGGACCA 5'& ||| . || || .||||||| &5' AGGTGTGTCTAGATTCCTGGT 3' |
Trim52 | mmu-miR-666-5p | beg:244 | end:263 | pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |.|||. |||||.|| &5' ---TTTCATTA--GTGCCTGC- 3' |
Trim52 | mmu-miR-669j | beg:952 | end:971 | pic:3' ACAAACGTACACTCATATACGT 5'& |.|| | |||||||. &5' -----GTATATAGGTATATGT- 3' |
Trim52 | mmu-miR-671-3p | beg:1372 | end:1393 | pic:3' CCACC-TCGGGACTCTTGGCCT 5'& |||| |||..||||| ||| &5' -GTGGTAGCTTTGAGA---GGA 3' |
Trim52 | mmu-miR-673-3p | beg:24 | end:42 | pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& || .||| |||.||| &5' --TGA--GGAAA----CCCTGGA 3' |
Trim52 | mmu-miR-674 | beg:862 | end:881 | pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .||| .|||||| &5' ----TCACAGAAA-TTCAGTG- 3' |
Trim52 | mmu-miR-684 | beg:823 | end:840 | pic:3' AACTGAACTTC-CCTTTTGA 5'& ||||| ||||||. &5' -----TTGAAATGGAAAAT- 3' |
Trim52 | mmu-miR-694 | beg:465 | end:487 | pic:3' GAAGTCCG---TTGTAAAAGTC 5'& ||||| ||..|||||| &5' -TTCAGAACTGAATGTTTTCA- 3' |
Trim52 | mmu-miR-698 | beg:1575 | end:1596 | pic:3' TCCCTTCCTTTG-CTCTTAC 5'& |||||||||| | |||| &5' --GGAAGGAAACTGTTAATG 3' |
Trim52 | mmu-miR-703 | beg:1065 | end:1085 | pic:3' AAGAAAGGAAGACTTCCAAAA 5'& |||| |||.||||| &5' ---TTTCATTATGAGGGTTT- 3' |
Trim52 | mmu-miR-708 | beg:738 | end:760 | pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.|.||| |||.||||| &5' ----GTTGGATCTAAAGTTCCTT 3' |
Trim52 | mmu-miR-713 | beg:198 | end:211 | pic:3' CGACACACGGAAGTCACGT 5'& |.| ||||||| &5' -------GTC-TCAGTGC- 3' |
Trim52 | mmu-miR-713 | beg:1481 | end:1506 | pic:3' CGACACACG---GAAGTC-ACGT 5'& .||||||. |||.| |||| &5' -TTGTGTGTAAACTTTAAATGCA 3' |
Trim52 | mmu-miR-743a | beg:1525 | end:1547 | pic:3' AGATGAGTCGAACC---ACAGAAAG 5'& .||||.|| |||.|||| &5' ----TTCAGTTTTCTTATGTTTTTC 3' |
Trim52 | mmu-miR-743b-3p | beg:1525 | end:1547 | pic:3' AGATAAGTCGTAC---TACAGAAAG 5'& |||||. ||||.|||| &5' ----TTCAGTTTTCTTATGTTTTTC 3' |
Trim52 | mmu-miR-760 | beg:1256 | end:1272 | pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||||. ..|||||| &5' TCCCT------TTAGAGCC- 3' |
Trim52 | mmu-miR-871 | beg:483 | end:506 | pic:3' GTACT--GACCGTGATTAGACTTAT 5'& ||||| ||||. ||.|||||| &5' CATGAGCCTGGT----ATTTGAATA 3' |
Trim52 | mmu-miR-872star | beg:555 | end:577 | pic:3' TCCTCCGATGACGTTATCAAGT 5'& |||| |||. ||||||||. &5' AGGAATCTATGTCAATAGTTT- 3' |
Trim52 | mmu-miR-872star | beg:679 | end:702 | pic:3' TCCTCCGATGACGTTATCAAGT 5'& |||| | ||| ||||||| &5' AGGAAGAATATGCT-TAGTTCA 3' |
Trim52 | mmu-miR-875-3p | beg:574 | end:599 | pic:3' GTATCGG---AGTCATAAAAGTCC 5'& .||||. |||| |||||.|| &5' TATAGTAATGTCAG-ATTTTTAG- 3' |
Trim52 | mmu-miR-875-5p | beg:947 | end:968 | pic:3' GTGGACTATTTTGACTCCATAT 5'& ||| |.|| ||||||| &5' -ACCAGGTATAT---AGGTATA 3' |
Trim52 | mmu-miR-876-5p | beg:639 | end:657 | pic:3' ATCACTAAGTGTC-TCTTTAGGT 5'& |||| .| .||||||. &5' ----GATT-GCTTTGGAAATCT- 3' |
Trim52 | mmu-miR-883a-5p | beg:282 | end:302 | pic:3' CATTGACGATGAAGAGAGTCGT 5'& .|| ||.|| |||||.| &5' ----TTG-TATTTAGCTCAGTA 3' |
Trim52 | mmu-miR-883b-5p | beg:281 | end:302 | pic:3' ACTGACGATGGGTAAGAGTCAT 5'& | .|| ||...| ||||||| &5' -G-TTG-TATTTAG-CTCAGTA 3' |
Trim52 | mmu-miR-883b-5p | beg:194 | end:210 | pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ..|| |||||||. &5' ---------TTCAGTCTCAGTG 3' |
Trim52 | mmu-miR-883b-5p | beg:34 | end:53 | pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||| .|.| .|||||| &5' ---CTGGAGCTC---TTCAGTA 3' |
Trim52 | mmu-miR-93star | beg:288 | end:304 | pic:3' GCCCTTCACGATCGAGTCGTCA 5'& .||||||||.||| &5' ---------TTAGCTCAGTAGT 3' |
Trim52 | mmu-miR-96 | beg:3 | end:25 | pic:3' TCGTTTTT-ACACGATCACGGTTT 5'& |||||. |||||| |.||| &5' -GCAAAGCTTGTGCT----CTAAA 3' |
Trim52 | mmu-miR-181b | beg:466 | end:483 | pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& ||| |||||||| &5' ---------CAGAACTGAATGTT 3' |
Trim52 | mmu-miR-1948 | beg:987 | end:998 | pic:3' GACATGCTCACGAGACGGATTT 5'& .||||||| &5' -------------TTGCCTAA- 3' |