DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004530 mmu-miR-127* 28199 Dcaf11 uagucUCGGGAGACUCGAAGUc :||| | ||||||| cugguGGCCAGC--AGCUUCAa 2 18 597 616 [mm9:14:56188805-56188824:+] 0.5767 142 7 -14.70 -0.3982 MIMAT0004541 mmu-miR-188-3p 28199 Dcaf11 acGUU-UGGGACGUACACCCUc ||| | |||: ||||||| ccCAAUAAACUGUCUGUGGGAa 2 20 668 689 [mm9:14:56188876-56188897:+] 0.5767 158 7 -18.56 -0.5782 MIMAT0004616 mmu-miR-30c-1* 28199 Dcaf11 ccucauuuguuggGAGAGGGUc |||||||| ucacuggcuguggCUCUCCCAa 2 10 651 672 [mm9:14:56188859-56188880:+] 0.5767 145 7 -17.37 -0.5351 MIMAT0005438 mmu-miR-30c-2* 28199 Dcaf11 ucucauuugucggaAGAGGGUc ||||||| ucacuggcuguggcUCUCCCAa 2 9 651 672 [mm9:14:56188859-56188880:+] 0.5767 140 7 -14.10 -0.5315 MIMAT0000549 mmu-miR-322* 28199 Dcaf11 cacAACGU-CGCGA---AGUACAAa ||| : |:|:| ||||||| gucUUGAGUGUGUUUAAUCAUGUUc 2 19 272 296 [mm9:14:56188480-56188504:+] 0.5738 144 7 -13.24 -0.8967 MIMAT0004638 mmu-miR-323-5p 28199 Dcaf11 cgCUUGCGCGGUGCCUGGUGGa ||:| :| || ||||||| cuGAGCCUG-GACUGACCACCc 2 21 135 155 [mm9:14:56188343-56188363:+] 0.5901 154 7 -20.60 -0.1419 MIMAT0000672 mmu-miR-199b* 28199 Dcaf11 cuugUCCAUCA-GAUUUGUGACCc ||| | | || ||||||| guggAGGAACUGCU-CACACUGGg 2 20 80 102 [mm9:14:56188288-56188310:+] 0.5901 148 7 -19.78 -0.1151 MIMAT0003167 mmu-miR-540-3p 28199 Dcaf11 gguccuagcuggAGACUGGa ||||||| -----------aUCUGACCu 2 9 1 9 [mm9:14:56188209-56188217:+] 0.6282 140 7 -14.16 -0.1141 MIMAT0003733 mmu-miR-665 28199 Dcaf11 ucccUGGAGUC---GGAGGACCa :|||||| |||||||| guuuGCCUCAGCAACCUCCUGGg 2 17 469 491 [mm9:14:56188677-56188699:+] 0.5738 159 7 -28.00 -0.2027 MIMAT0015219 mmu-miR-3475 28199 Dcaf11 aaguuuggUACAC-GGAGGUCu || || ||||||| --------AUCUGACCUCCAGu 2 14 1 14 [mm9:14:56188209-56188222:+] 0.6282 148 7 -15.61 -0.1146 MIMAT0003895 mmu-miR-764-3p 28199 Dcaf11 ugucaacggUGAUACCG-GAGGa :||:|||| |||| uucucacugGCUGUGGCUCUCCc 2 14 648 670 [mm9:14:56188856-56188878:+] 0.5767 121 0 -19.53 -0.6911 MIMAT0003449 mmu-miR-488* 28199 Dcaf11 aacUCUC-ACGAUAAUAGACCc ||:| | ||||||||| ggcAGGGCAUCCAUUAUCUGGg 2 19 229 250 [mm9:14:56188437-56188458:+] 0.5901 153 7 -20.08 -0.1124 MIMAT0003452 mmu-miR-678 28199 Dcaf11 ggAGGUCAGG--AACGUGGCUCUg || :| || | :||||||| caUCAGGGCCAAGUAUACCGAGAc 2 21 399 422 [mm9:14:56188607-56188630:+] 0.5738 147 7 -24.15 -0.3162 MIMAT0004825 mmu-miR-423-5p 28199 Dcaf11 uuUCAGAGCGAGAGACGG-GGAGu || | : :|||||||| |||| ucAG-CAUAUUCUCUGCCUCCUCc 2 22 33 55 [mm9:14:56188241-56188263:+] 0.6282 131 0 -23.51 -0.3668 MIMAT0003472 mmu-miR-693-5p 28199 Dcaf11 cuuuugaaaGCCUACACCGAc :|| ||||||| ccuucucacUGGCUGUGGCUc 2 13 646 666 [mm9:14:56188854-56188874:+] 0.5767 148 7 -15.58 -0.1777 MIMAT0003742 mmu-miR-455 28199 Dcaf11 cacauauACGGGCACCUGACg || | ||||||| cccaggcUGAGCCUGGACUGa 2 15 129 149 [mm9:14:56188337-56188357:+] 0.5901 146 7 -16.26 -0.1129 MIMAT0003494 mmu-miR-704 28199 Dcaf11 gauCCUCGUCUCGUG-UACAGa ||:|: ||| || ||||| ccuGGGGU-GAGAACUAUGUCu 2 19 486 506 [mm9:14:56188694-56188714:+] 0.5738 124 0 -21.08 -0.5820 MIMAT0003499 mmu-miR-709 28199 Dcaf11 aggaggacGGAGACGGAGg :||||||||| cagcauauUCUCUGCCUCc 2 12 34 52 [mm9:14:56188242-56188260:+] 0.6282 151 7 -22.78 -0.5215 MIMAT0004841 mmu-miR-871 28199 Dcaf11 guacugaCCGUGA---UUAGACUUAu | |||| ::||||||| uaguguaGACACUUGAGGUCUGAAUg 2 17 317 342 [mm9:14:56188525-56188550:+] 0.5738 147 7 -15.92 -0.1095 MIMAT0004848 mmu-miR-883a-5p 28199 Dcaf11 cauugacgaugaaGAGAGUCGu :||||||| uguguagggugaaUUCUCAGCa 2 10 17 38 [mm9:14:56188225-56188246:+] 0.6282 141 7 -18.02 -1.0331 MIMAT0004848 mmu-miR-883a-5p 28199 Dcaf11 cauuGACGA---UGAAG--AGAG-UCGu ||||| |:||| |||| ||| caguCUGCUUGGAUUUCGAUCUCUAGCc 2 19 194 221 [mm9:14:56188402-56188429:+] 0.5901 120 0 -16.11 -0.3138 MIMAT0004862 mmu-miR-877* 28199 Dcaf11 acccuccucccUCUUCUCCUGu | |||||||: gcagcuucaacAAAAGAGGAUa 2 12 607 628 [mm9:14:56188815-56188836:+] 0.5767 131 0 -12.55 -0.1082 MIMAT0007863 mmu-miR-1902 28199 Dcaf11 uuCAGUACGGAUGACG-UGGAGa ||: ||||| | || ||||| guGUU-UGCCU-CAGCAACCUCc 2 21 467 487 [mm9:14:56188675-56188695:+] 0.5738 124 0 -17.84 -0.1039 MIMAT0007866 mmu-miR-1905 28199 Dcaf11 gauggcgCACCACCCUGACCAc ||| ||||||| cuuugaaGUGAAAAGACUGGUc 2 16 522 543 [mm9:14:56188730-56188751:+] 0.5538 143 7 -14.12 -0.6791 MIMAT0009399 mmu-miR-1935 28199 Dcaf11 ucucuAGGCG-GUCGGAGACGGa || || :| :||||||| aauucUCAGCAUAUUCUCUGCCu 2 18 28 50 [mm9:14:56188236-56188258:+] 0.6282 152 7 -21.99 -0.6878 MIMAT0009408 mmu-miR-1943 28199 Dcaf11 agguccACGGGUCUAGGAGGGAa ||||: |||||||| auucucUGCCU-CCUCCUCCCUu 2 18 40 61 [mm9:14:56188248-56188269:+] 0.6282 151 7 -23.96 -0.5717 MIMAT0009441 mmu-miR-1968 28199 Dcaf11 ucAGGUGGUAGGAAU-UGUC-GACGu || |||:| || ||| |||| ccUCGUGCAUUCAUACCCAGUCUGCu 2 23 177 202 [mm9:14:56188385-56188410:+] 0.5901 121 0 -15.21 -0.2489 MIMAT0009460 mmu-miR-1982.1 28199 Dcaf11 gacacccucuUGUAUCCCACUCu ||| ||||||| ggaacugcucACACUGGGUGAGa 2 14 85 107 [mm9:14:56188293-56188315:+] 0.5901 149 7 -20.00 -0.6904 MIMAT0009460 mmu-miR-1982.1 28199 Dcaf11 gacacccucuuGUAUCCCACUCu | |:||||||| cucagcaaccuCCUGGGGUGAGa 2 13 475 497 [mm9:14:56188683-56188705:+] 0.5738 148 7 -18.01 -0.3970 MIMAT0009461 mmu-miR-1982.2 28199 Dcaf11 gacacccucuUGUAUCCCACu :::||||||| cuccaguucuGUGUAGGGUGa 2 12 8 28 [mm9:14:56188216-56188236:+] 0.6282 143 7 -18.97 -0.3998 MIMAT0011287 mmu-miR-2183 28199 Dcaf11 ucCUCCAGUCCCCA-AGUu ||||| | |||| ||| gaGAGGU-AUGGGUCUCAg 2 17 545 562 [mm9:14:56188753-56188770:+] 0.5337 122 0 -18.10 -0.1454 MIMAT0015641 mmu-miR-3470b 28199 Dcaf11 ggucggaccAGAU--GUCUCACu |||| ||||||| auuucgaucUCUAGCCAGAGUGu 2 13 206 228 [mm9:14:56188414-56188436:+] 0.5901 147 7 -16.27 -0.1452 MIMAT0004528 mmu-miR-125a-3p 28199 Dcaf11 ccGAGGGUUCUUGGAGUG-GACa :| || ||: |:|||| ||| cuUUGCCCAGGUCUUCACACUGa 2 21 360 382 [mm9:14:56188568-56188590:+] 0.5738 128 0 -24.37 -0.7220 MIMAT0000136 mmu-miR-125b-5p 28199 Dcaf11 aguGUUCAAUC-CCAG-AGUCCCu :|: ||:| || | |||||| aguUAGAUUGGUGGCCAUCAGGGc 2 20 384 407 [mm9:14:56188592-56188615:+] 0.5738 122 6 -18.03 -0.2630 MIMAT0000212 mmu-miR-183 28199 Dcaf11 ucaCUUAAGAUGGUCA-CGGUAu ||:|| |:::|| ||||| ugaGAGUUAGAUUGGUGGCCAUc 2 20 380 402 [mm9:14:56188588-56188610:+] 0.5738 127 0 -16.15 -0.2135 MIMAT0000229 mmu-miR-199a-5p 28199 Dcaf11 cuugUCCAUCA-GACUUGUGACCc ||| | | || ||||||| guggAGGAACUGCU-CACACUGGg 2 20 80 102 [mm9:14:56188288-56188310:+] 0.5901 148 7 -21.36 -0.1151 MIMAT0000366 mmu-miR-290-5p 28199 Dcaf11 uuucaCGGGGGUAUCA-AACUCa ||: | | ||| ||||| uucugGCUACAAGAGUCUUGAGu 2 18 258 280 [mm9:14:56188466-56188488:+] 0.5820 121 0 -12.87 -0.4255 MIMAT0000373 mmu-miR-295 28199 Dcaf11 ucUGAGUUUUCAUCAUC-GUGAAa :||| | ||| |||| ||||| ugGCUC-AUAGU-GUAGACACUUg 2 22 310 331 [mm9:14:56188518-56188539:+] 0.5738 129 0 -20.50 -0.5737 MIMAT0000565 mmu-miR-328 28199 Dcaf11 ugcCUUCCCGUCUCUCCCGGUc |: || || ||||||| auuGGUGGCCA-UCAGGGCCAa 2 20 390 410 [mm9:14:56188598-56188618:+] 0.5738 145 7 -19.96 -0.4138 MIMAT0004853 mmu-miR-874 28199 Dcaf11 agccagggaGCCCGGUCCCGUc :| | ||||||| uagccagagUGUGGCAGGGCAu 2 14 217 238 [mm9:14:56188425-56188446:+] 0.5901 145 7 -20.20 -0.1035 MIMAT0004937 mmu-miR-875-5p 28199 Dcaf11 gugGACUAUUUUGACUCCAUAu |||:| :| ||||||| agaCUGGUCUGA--GAGGUAUg 2 20 535 554 [mm9:14:56188743-56188762:+] 0.5538 148 7 -16.36 -0.2306 MIMAT0004943 mmu-miR-653 28199 Dcaf11 gucaucucuaaCAAAGUUGUg | ||||||| gguggccagcaGCUUCAACAa 2 11 599 619 [mm9:14:56188807-56188827:+] 0.5767 142 7 -10.00 -0.4566

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G045303 Dcaf11 Mus musculus 28199

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Wdr23 mmu-miR-127star beg:599 end:616 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& .||| | ||||||| &5' -----GGCCAGC--AGCTTCA- 3' Wdr23 mmu-miR-3475 beg:1 end:14 pic:3' AAGTTTGGTACAC-GGAGGTCT 5'& || ||||||| &5' -----------TGACCTCCAG- 3' Wdr23 mmu-miR-709 beg:38 end:59 pic:3' AGGAGGACGGAGACGGAGG 5'& |.|| ||||||| ||||| &5' TTCT-CTGCCTCCTCCTCC 3' Wdr23 mmu-miR-1905 beg:526 end:542 pic:3' GATGGCGCACCACCCTGACCAC 5'& ||| ||||||| &5' -------GTGAAAAGACTGGT- 3' Wdr23 mmu-miR-875-5p beg:535 end:554 pic:3' GTGGACTATTTTGACTCCATAT 5'& |||.| .| |||||||. &5' ---CTGGTCTGA--GAGGTATG 3' Wdr23 mmu-miR-1982.1 beg:92 end:108 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||| |||||||| &5' ----------ACACTGGGTGAGA 3' Wdr23 mmu-miR-1982.1 beg:485 end:498 pic:3' GACACCCTCTTGTATCCCACTCT 5'& |.|||||||| &5' -------------TGGGGTGAGA 3' Wdr23 mcmv-miR-m88-1 beg:621 end:642 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& .||. ||| ||||||| &5' GGATAAA-ACAG-GACTTCT- 3' Wdr23 mghv-miR-M1-8 beg:0 end:22 pic:3' CTGGTTTGGGGGTCACT-CACGA 5'& |.| .|||.||||| |||. &5' -ATCTGACCTCCAGTTCTGTGT- 3' Wdr23 mmu-let-7b beg:33 end:52 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .||.| || ||.|||| &5' ----GCATATTCT-CTGCCTC- 3' Wdr23 mmu-let-7d beg:33 end:52 pic:3' TTGATACGTT--GGATGATGGAGA 5'& ||| .|| ||.|||| &5' ------GCATATTCT-CTGCCTC- 3' Wdr23 mmu-let-7g beg:33 end:52 pic:3' TTGACATGTTTGATGATGGAGT 5'& | |.| || ||.|||| &5' ----GCATATTCT-CTGCCTC- 3' Wdr23 mmu-let-7gstar beg:8 end:24 pic:3' CGTTCCGTCACCGGACATGTCA 5'& |||| .||||..|| &5' ------CAGT--TCTGTGTAG- 3' Wdr23 mmu-let-7i beg:31 end:52 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |||||.| || ||.|||| &5' --CAGCATATTCT-CTGCCTC- 3' Wdr23 mmu-miR-1188 beg:82 end:100 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& || | |||||||. &5' ----GGAACTG-CTCACACT- 3' Wdr23 mmu-miR-1188 beg:361 end:381 pic:3' AGGACCGGGTT--GGAGTGTGGT 5'& |||||. |.||||||. &5' -----GCCCAGGTCTTCACACT- 3' Wdr23 mmu-miR-1195 beg:123 end:148 pic:3' ACTCG--TCCGAC-CGGAGCTTGAGT 5'& |.|| |||||| |||| |.||| &5' -GGGCCCAGGCTGAGCCT-GGACT-- 3' Wdr23 mmu-miR-1306 beg:391 end:413 pic:3' GTAGTGGTGGTCTCGGTTGCA 5'& .| .|||.|||.||||| || &5' -GTGGCCATCAGGGCCAA-GT 3' Wdr23 mmu-miR-151-3p beg:183 end:201 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& .||| || ||||||. &5' -TTCATA---CC-CAGTCTG- 3' Wdr23 mmu-miR-1839-5p beg:33 end:51 pic:3' GTTCTGGACAAGATAGATGGAA 5'& .| ||| |||.||| &5' ----GCATATTC--TCTGCCT- 3' Wdr23 mmu-miR-185 beg:415 end:433 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||. |||||||.||. &5' ----GAGA--CCTTTCTTTCT- 3' Wdr23 mmu-miR-188-3p beg:667 end:689 pic:3' ACGTTTGG-GACGTACACCCTC 5'& ||| |||. ||||||| &5' --CAATAAACTGTCTGTGGGA- 3' Wdr23 mmu-miR-1897-5p beg:51 end:75 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& ||.|| ||||| || || ..| &5' CCTCC-CTTTCCCCTTCTGGGG 3' Wdr23 mmu-miR-1906 beg:118 end:141 pic:3' TCGGGA-CGGAGTCCGACGACGT 5'& .|.|. ||| ||||||| || &5' GGTCTGGGCC-CAGGCTGA-GC- 3' Wdr23 mmu-miR-1928 beg:215 end:232 pic:3' CTCGACCGTTACATCGA 5'& ||| | |.|||.|| &5' -AGCCAG-AGTGTGGC- 3' Wdr23 mmu-miR-1930 beg:66 end:87 pic:3' TGCGACGTC-CATGATACCTCCA 5'& ||| .| |||| .|||||| &5' ---CTGGGGAGTAC-GTGGAGG- 3' Wdr23 mmu-miR-1935 beg:30 end:51 pic:3' TCTCTAGGCGGTCG-----GAGACGGA 5'& .|||| |||||||| &5' ---------TCAGCATATTCTCTGCCT 3' Wdr23 mmu-miR-1937c beg:245 end:264 pic:3' ACCCC-CGA-GAAGGCCCTA 5'& |||| || ||||.|| &5' -GGGGTGCCGCTTCTGG--- 3' Wdr23 mmu-miR-1943 beg:38 end:62 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& |.| ||||. ||||||||| &5' TTCTC-TGCCTCC-TCCTCCCTT 3' Wdr23 mmu-miR-1952 beg:445 end:464 pic:3' GTCT-TCCT-CCCACCTCT 5'& .|| |||| |||| |.|| &5' -GGACAGGATGGGTAGGGA 3' Wdr23 mmu-miR-1956 beg:126 end:148 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& || | |.|| || |||||||| &5' -CC-CAGGCTGAG-CCTGGACT 3' Wdr23 mmu-miR-1971 beg:210 end:232 pic:3' AGAG-TCGGG-TCGGAAATG 5'& |||| |||| ||. | .| &5' TCTCTAGCCAGAGTGTG-GC 3' Wdr23 mmu-miR-1982star beg:651 end:673 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& || |.. |.|.||||||| &5' -CTGGCTGTGGCTCTCCCAA 3' Wdr23 mmu-miR-199bstar beg:79 end:103 pic:3' CTTGTCCATCA--GATT--TGTGACCC 5'& || || ||. |||||||| &5' -----GG-AGGAACTGCTCACACTGGG 3' Wdr23 mmu-miR-201 beg:87 end:105 pic:3' TTCTTGTTACGGAA-TGACTCAT 5'& |||. ||||.||. &5' --------TGCTCACACTGGGTG 3' Wdr23 mmu-miR-205 beg:68 end:88 pic:3' GTCTGAGGCCACCT----TACTTCCT 5'& |.|| ||| .||.|||| &5' ------CTGG-GGAGTACGTGGAGGA 3' Wdr23 mmu-miR-2135 beg:621 end:642 pic:3' CAAAGCCGGG---GTTCTGGAGA 5'& || ||.|||.||| &5' -----GGATAAAACAGGACTTCT 3' Wdr23 mmu-miR-2135 beg:408 end:427 pic:3' CAAAGCCGG--GGTTCTGGAGA 5'& |. ||.||||||.| &5' ------GTATACCGAGACCTTT 3' Wdr23 mmu-miR-2136 beg:175 end:197 pic:3' GTGTAGAGTCAGT---TGTGGGTC 5'& |||. || |.|||||| &5' -----CTCGTGCATTCATACCCAG 3' Wdr23 mmu-miR-2146 beg:200 end:219 pic:3' GTGTACCTTGGGA-AGAGGTG 5'& |||| ..| ||||.| &5' ----TGGATTTCGATCTCTA- 3' Wdr23 mmu-miR-218-1star beg:278 end:296 pic:3' CCACGAACTGCCTTGGTACAAA 5'& |||.|| ||.|||||| &5' -GTGTTT-----AATCATGTT- 3' Wdr23 mmu-miR-218-2star beg:486 end:504 pic:3' GCGCCACGAACTGTCTTGGTAC 5'& | |||| |||||.||| &5' -GGGGTG------AGAACTATG 3' Wdr23 mmu-miR-222 beg:209 end:232 pic:3' TGGGTCATCGGTCT-ACATCGA 5'& |.|. |||||||| |||.|| &5' ATCTC-TAGCCAGAGTGTGGC- 3' Wdr23 mmu-miR-24 beg:132 end:169 pic:3' GACAAGGAC--GACT----------TGACTCGGT 5'& ||| |||| |||| ||||.|||| &5' CTGAGCCTGGACTGACCACCCCCAAACTGGGCCA 3' Wdr23 mmu-miR-26a beg:500 end:522 pic:3' TCGGATAGGACCTAATGAACTT 5'& |.||. || ||||||.| &5' -GTCTGCTCTCA--TACTTGGA 3' Wdr23 mmu-miR-26b beg:501 end:522 pic:3' TGGATAGGACTTAATGAACTT 5'& .||. || ||||||.| &5' -TCTGCTCTCA--TACTTGGA 3' Wdr23 mmu-miR-298 beg:31 end:50 pic:3' CCCTTCTTGTCGGG-AGGAGACGG 5'& |||| |.||||||| &5' --------CAGCATATTCTCTGCC 3' Wdr23 mmu-miR-30c-1star beg:661 end:672 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||||||| &5' -------------CTCTCCCA- 3' Wdr23 mmu-miR-30c-2star beg:653 end:672 pic:3' TCTCATTTGTCGGA----AGAGGGTC 5'& .||. ||||||| &5' ---------GGCTGTGGCTCTCCCA- 3' Wdr23 mmu-miR-30c-2star beg:493 end:514 pic:3' TCTCATTTGT--CGGAAGAGGGTC 5'& ||| ||| |.|| |||.|| &5' -GAG--AACTATGTCTGCTCTCA- 3' Wdr23 mmu-miR-30estar beg:367 end:386 pic:3' CGACATTTGTAGGC---TGACTTTC 5'& .||. |||||.|| &5' ---------GTCTTCACACTGAGAG 3' Wdr23 mmu-miR-327 beg:37 end:55 pic:3' TAGGAGTACGG-GGAGTTCA 5'& ||.||| |||| |||| &5' ATTCTC-TGCCTCCTC---- 3' Wdr23 mmu-miR-328 beg:390 end:410 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& || ||| ||||||| &5' --GGT--GGCCATCAGGGCCA- 3' Wdr23 mmu-miR-342-5p beg:344 end:363 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||. ||.||||.| &5' ------CATTAGCAGTACCCTT 3' Wdr23 mmu-miR-3471 beg:540 end:562 pic:3' TTACGGAATG-TCA-ACCTAGAGT 5'& |.|| .|| |||.||||| &5' ---GTCTGAGAGGTATGGGTCTCA 3' Wdr23 mmu-miR-3471 beg:193 end:211 pic:3' TTACGGAATGTCAACCTAGAGT 5'& |.| |.| ||||||.|| &5' ---GTC-TGC--TTGGATTTC- 3' Wdr23 mmu-miR-370 beg:363 end:386 pic:3' TGGTCCA-AGGTG-GGGTCGTCCG 5'& |||||| |.||| |. || || &5' -CCAGGTCTTCACACTGAG-AG-- 3' Wdr23 mmu-miR-409-5p beg:591 end:606 pic:3' TACGTTTCAACGAGCCCATTGGA 5'& ||||| |||..|| &5' --------TTGCT--GGTGGCC- 3' Wdr23 mmu-miR-450b-5p beg:308 end:326 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& || |||| ||.|.| &5' ------GGCTCATAGTGTAGA- 3' Wdr23 mmu-miR-467e beg:497 end:520 pic:3' TGTATATGTACG--AGTGTGAATA 5'& |||. ||| |||.||||. &5' ---TATGTCTGCTCTCATACTTG- 3' Wdr23 mmu-miR-483star beg:449 end:471 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& |.||.||| |||||| || &5' AGGATGGGTAGGGAGGTGT-- 3' Wdr23 mmu-miR-484 beg:119 end:145 pic:3' TAGCCCT--CCC----CTGACTCGGACT 5'& ||| ||| |.|||||||||. &5' ---GGGTCTGGGCCCAGGCTGAGCCTGG 3' Wdr23 mmu-miR-488 beg:626 end:646 pic:3' CTGGTTCTTTGTC----GGAAAGTT 5'& |||||| .|||||| &5' -------AAACAGGACTTCTTTCA- 3' Wdr23 mmu-miR-504 beg:101 end:126 pic:3' CTATCTCAC-GTCT---GGTCCCAGA 5'& ||| |||| ||||||||| &5' ----GAGAAACAGAAACCCAGGGTCT 3' Wdr23 mmu-miR-509-5p beg:476 end:494 pic:3' TACTAACGGTGTAAGACCTCAT 5'& || || ||||.||. &5' ------GCAACCTCCTGGGGTG 3' Wdr23 mmu-miR-665 beg:470 end:491 pic:3' TCCCTGGAGTCG---GAGGACCA 5'& .||||||| ||||||| &5' ----GCCTCAGCAACCTCCTGG- 3' Wdr23 mmu-miR-666-5p beg:647 end:667 pic:3' CCGAGAGTG-TCGACA-CGGGCGA 5'& .|||||| .||||| ||.| &5' --TTCTCACTGGCTGTGGCTC--- 3' Wdr23 mmu-miR-667 beg:450 end:472 pic:3' GAACCCGACCCA-CCGTCCACAGT 5'& || ||||| || ||||||. &5' ---GGA-TGGGTAGGGAGGTGTT- 3' Wdr23 mmu-miR-673-3p beg:442 end:466 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& |||| ||||.|. .|. ||| &5' GGTGGACAGGATG-GGTAG-GGA 3' Wdr23 mmu-miR-684 beg:673 end:693 pic:3' AACTGAACTTC-CCTTTTGA 5'& ||| | ||.||||| &5' ---ACTGTCTGTGGGAAACT 3' Wdr23 mmu-miR-684 beg:517 end:536 pic:3' AACTG-AACTTCCCTTTTGA 5'& ||| |||||| ||||| &5' --GACTTTGAAGTGAAAA-- 3' Wdr23 mmu-miR-687 beg:441 end:459 pic:3' AGTAACGACGTAAG-GTCCTATC 5'& | .| ||||||.| &5' --------GGGTGGACAGGATGG 3' Wdr23 mmu-miR-693-5p beg:652 end:666 pic:3' CTTTTGAAAGCCTACACCGAC 5'& .|| ||||||| &5' ---------TGGCTGTGGCT- 3' Wdr23 mmu-miR-711 beg:550 end:561 pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& .|||||.| &5' --------------TGGGTCTC 3' Wdr23 mmu-miR-743b-5p beg:321 end:342 pic:3' ACTACCTGTGG---TCAGACTTGT 5'& |||||. .|||||||. &5' -----GACACTTGAGGTCTGAAT- 3' Wdr23 mmu-miR-760 beg:106 end:125 pic:3' AGGGGTGTCT--GGGTCTCGGC 5'& ||||| |||||.|.| &5' -----ACAGAAACCCAGGGTC- 3' Wdr23 mmu-miR-804 beg:80 end:98 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& ||||||| .|||||| &5' -------GAGGAACTGCTCACA 3' Wdr23 mmu-miR-871 beg:323 end:343 pic:3' GTACTGACCGTGA---TTAGACTTAT 5'& | |||| ..|||||||. &5' -------GACACTTGAGGTCTGAATG 3' Wdr23 mmu-miR-883a-5p beg:17 end:39 pic:3' CATTGACGATGAAGAGAGTCGT 5'& ||. | |. .|||||||| &5' GTGTAGGGTGAA-TTCTCAGCA 3' Wdr23 mmu-miR-883a-5p beg:462 end:482 pic:3' CATTGACGATGAAGAGAGTCGT 5'& |. ||.| | ||||||| &5' --AGGTGTTTG--C-CTCAGCA 3' Wdr23 mmu-miR-93star beg:460 end:482 pic:3' GCCCTTCACGATC-GAGTCGTCA 5'& ||||.|||.| | ||||||| &5' -GGGAGGTGTTTGCCTCAGCA-- 3' Wdr23 mmu-miR-98 beg:33 end:52 pic:3' TTGTTATGT-TGAATGATGGAGT 5'& .|| |.| ||.|||| &5' ------GCATATTCTCTGCCTC- 3' Wdr23 mmu-miR-1982.2 beg:13 end:29 pic:3' GACACCCTCTTGTATCCCACT 5'& ||||| |||||||| &5' CTGTG--------TAGGGTGA 3' Wdr23 mmu-miR-322star beg:278 end:296 pic:3' CACAACGTCGCGA---AGTACAAA 5'& |. |.|.| ||||||| &5' -----GT-GTGTTTAATCATGTT- 3' Wdr23 mmu-miR-455 beg:136 end:149 pic:3' CACATATACGGGCACCTGACG 5'& ||| ||||||| &5' --------GCC--TGGACTG- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dcaf11 RAID00042016 mmu-miR-3057-3p miRNA MIMAT0014823 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00066205 mmu-miR-7679-3p miRNA MIMAT0029873 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00146055 mmu-miR-290a-5p miRNA MIMAT0000366 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00607108 mmu-miR-125a-3p miRNA MIMAT0004528 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00654304 mmu-miR-653-5p miRNA MIMAT0004943 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00754468 mmu-miR-5110 miRNA MIMAT0020618 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00828544 mmu-miR-322-3p miRNA MIMAT0000549 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00841333 mmu-miR-328-3p miRNA MIMAT0000565 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID00969769 mmu-miR-7051-3p miRNA MIMAT0028007 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01015762 mmu-miR-8116 miRNA MIMAT0031422 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01122256 mmu-miR-875-5p miRNA MIMAT0004937 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01229693 mmu-miR-325-3p miRNA MIMAT0004640 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01269054 mmu-miR-295-3p miRNA MIMAT0000373 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01437460 mmu-miR-183-5p miRNA MIMAT0000212 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01504113 mmu-miR-1982-3p miRNA MIMAT0009460 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01518188 mmu-miR-7229-3p miRNA MIMAT0028427 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01546954 mmu-miR-488-5p miRNA MIMAT0003449 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01583195 mmu-miR-874-3p miRNA MIMAT0004853 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01627933 mmu-miR-199a-5p miRNA MIMAT0000229 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01787520 mmu-miR-7081-5p miRNA MIMAT0028068 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID01795744 mmu-miR-125b-5p miRNA MIMAT0000136 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID02054244 mmu-miR-6936-5p miRNA MIMAT0027772 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID02225981 mmu-miR-6944-5p miRNA MIMAT0027788 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID02243285 mmu-miR-6918-5p miRNA MIMAT0027736 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID02669312 mmu-miR-6356 miRNA MIMAT0025099 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID02676421 mmu-miR-3097-3p miRNA MIMAT0014916 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID02892462 mmu-miR-709 miRNA MIMAT0003499 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID03122261 mmu-miR-6961-5p miRNA MIMAT0027822 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID03416610 mmu-mir-325 miRNA MI0000597 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID03460675 mmu-miR-6917-3p miRNA MIMAT0027735 Dcaf11 mRNA 28199 Prediction 0.1828 Dcaf11 RAID03795634 mmu-miR-883a-5p miRNA MIMAT0004848 Dcaf11 mRNA 28199 Prediction 0.1828