Dcaf13
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000367mmu-miR-291a-5p223499Dcaf13ucucucccggaggugAAACUAc |||||| ugucuuccuaccaagUUUGAUa28627[mm9:15:38978312-38978333:+]0.55081206-12.36-0.2994
MIMAT0004573mmu-miR-293*223499Dcaf13guuuuacaGUGUGUCAAACUca :|| ||||||| ugucuuccUACCAAGUUUGAua315627[mm9:15:38978312-38978333:+]0.55081300-9.47-0.2607
MIMAT0003173mmu-miR-547223499Dcaf13gagugaguuucuacAUGGUUc |||||| -uguuuugucuuccUACCAAg28120[mm9:15:38978307-38978326:+]0.55081206-9.27-0.1975
MIMAT0003189mmu-miR-291b-5p223499Dcaf13ccucucccggaggugAAACUAg |||||| ugucuuccuaccaagUUUGAUa28627[mm9:15:38978312-38978333:+]0.55081206-13.36-0.2994
MIMAT0004840mmu-miR-743b-3p223499Dcaf13agauaagucGUACUACAGAAag ::| |||||| ---------UGUUUUGUCUUcc314113[mm9:15:38978307-38978319:+]0.55081210-7.01-0.1056
MIMAT0009402mmu-miR-1938223499Dcaf13cuggcuugauguucAGGGUGGc |||:||| ----uguuuugucuUCCUACCa29118[mm9:15:38978307-38978324:+]0.55081240-11.92-0.1404
MIMAT0000160mmu-miR-150223499Dcaf13guGACCAUG--UUCCCAACCCUcu :|| ||| | |||||| auUUGCUACUUUUGAUUUGGGAac3213558[mm9:15:38978341-38978364:+]0.55081230-9.86-0.1084
MIMAT0000366mmu-miR-290-5p223499Dcaf13uuucACGGGGGUAUCAAACUca | |: ||| ||||||| gucuUCCUACCA-AGUUUGAua319727[mm9:15:38978313-38978333:+]0.55081360-13.86-0.2607
MIMAT0000369mmu-miR-292-5p223499Dcaf13guuuucucggGGGUCAAACUca || ||||||| ugucuuccuaCCAAGUUUGAua313627[mm9:15:38978312-38978333:+]0.55081320-12.83-0.2630
MIMAT0000379mmu-miR-301a223499Dcaf13cgAAACUGU-UA-UGAU-AACG-UGAc |||||:| || |:|| |||| ||| agUUUGAUAUAUAAUUAUUUGCUACUu2221945[mm9:15:38978325-38978351:+]0.55081340-11.93-1.1370
MIMAT0000651mmu-miR-19a223499Dcaf13agUCAAA--ACGUAU--CUAAACG-UGu ||||| | :||| |||||| || caAGUUUGAUAUAUAAUUAUUUGCUACu2221744[mm9:15:38978323-38978350:+]0.55081230-10.36-1.1936
MIMAT0000677mmu-miR-7a223499Dcaf13uguuguuuuaguGAUCAGAAGGu :| ||||||| ---------uguUUUGUCUUCCu212114[mm9:15:38978307-38978320:+]0.55081437-10.13-0.7104
MIMAT0000678mmu-miR-7b223499Dcaf13uguuguuuuaguguuCAGAAGGu ||||||| ---------uguuuuGUCUUCCu29114[mm9:15:38978307-38978320:+]0.55081407-10.13-0.7104
MIMAT0001091mmu-miR-410223499Dcaf13uguccGGUAGACACAAUAUAa ||| | || ||||| uccuaCCAAGUUUGAUAUAUa2171131[mm9:15:38978317-38978337:+]0.55081240-5.63-0.4320
MIMAT0004186mmu-miR-301b223499Dcaf13cgAAACUGU-UA-UGGU-AACG-UGAc |||||:| || |::| |||| ||| agUUUGAUAUAUAAUUAUUUGCUACUu2221945[mm9:15:38978325-38978351:+]0.55081300-11.45-1.1370
MIMAT0003456mmu-miR-495223499Dcaf13uucuucacGUGGUACAAACAAa :|||| ||||| | ugucuuccUACCAAGUUUGAUa215627[mm9:15:38978312-38978333:+]0.55081260-10.39-0.1100
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G058632Dcaf13Mus musculus223499
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Wdsof1mmu-miR-7abeg:4end:14pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||||||| &5' ---------------GTCTTCC- 3'
Wdsof1mmu-miR-7bbeg:4end:14pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||||||| &5' ---------------GTCTTCC- 3'
Wdsof1mmu-miR-106abeg:31end:54pic:3' GATGGACG-TGACAATCGTGAAAC 5'& ||..||| ||| ||. |||| &5' -TATTTGCTACTTTTGA---TTTG 3'
Wdsof1mmu-miR-450b-5pbeg:46end:67pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| ||||| |||.||| &5' -ATTTGGGAACT--CTGTAAA- 3'
Wdsof1mmu-miR-452beg:47end:69pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& .| | |||||.|||.| &5' --TTTGGGAA-CTCTGTAAATA 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Dcaf13; Gm83; Wdsof1mmu-miR-3784886-UGUGUCCU--GGAC--------------CUCAGUCCUC |: :||| :||| ||||| ||GAUUUGGGAACUCUGUAAAUAAAAGUCCUGAGUCUGGU-
Dcaf13; Gm83; Wdsof1mmu-miR-434-3p7091CCUCAG--CUCACUACCAAGUUU |||| |||| |||||:||-AAGUCCUGAGUC-UGGUUUAAU
Dcaf13; Gm83; Wdsof1mmu-miR-450b4868AUAAGUCCUUGUAUGACGUUUU |||::||||| |||:|||GAUUUGGGAACU--CUGUAAAU
Dcaf13; Gm83; Wdsof1mmu-miR-4845086UAGCCCUCC-------------CCUGACUCGGACU- |:|||| | |||||:|||:UUUGGGAACUCUGUAAAUAAAAGUCCUGAGUCUGGU
Dcaf13; Gm83; Wdsof1mmu-miR-3786686UGUGUCCUGGACCUCAGUCCuc|:| | | ||| ||||| ||ATAAAAGTCCT-GAGTCTGGtt
Dcaf13; Gm83; Wdsof1mmu-miR-434-3p6990ccUCAG--CUCACUACCAAGUUu |||| |||| |||||:||aaAGTCCTGAGT-CTGGTTTAAt
Dcaf13; Gm83; Wdsof1mmu-miR-4846384uagcccuccccuGACUCGGACu |||||:|||taaataaaagtcCTGAGTCTGg
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Dcaf13RAID00238876mmu-miR-301a-3pmiRNAMIMAT0000379Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID00491385mmu-miR-292a-5pmiRNAMIMAT0000369Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID00628131mmu-miR-7a-5pmiRNAMIMAT0000677Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID01787156mmu-miR-495-3pmiRNAMIMAT0003456Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID01788546mmu-miR-301b-3pmiRNAMIMAT0004186Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID01892738mmu-miR-150-5pmiRNAMIMAT0000160Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID02701764mmu-miR-290a-5pmiRNAMIMAT0000366Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID03335509mmu-miR-410-3pmiRNAMIMAT0001091Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID03700634mmu-miR-7b-5pmiRNAMIMAT0000678Dcaf13mRNA223499Prediction0.1828
Dcaf13RAID04062187mmu-miR-19a-3pmiRNAMIMAT0000651Dcaf13mRNA223499Prediction0.1828