DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Klhl38 | mmu-miR-103 | 1 | 37 | AGUAUCGG--------------GACAUGUUA--CGACGA | :||| |||| ||| ||||: | ---GGGCCGCAGGAACUUAUCUCUGUCCAAAAGGCUGUG |
Klhl38 | mmu-miR-127 | 54 | 81 | CGGUUCGAG---UCUG--CCUAGGCU- | || ||||| ||:| ||| |:|| | ACCCAGCUCCAAAGGCAUGGAGCUGAG |
Klhl38 | mmu-miR-130b | 158 | 188 | UACGGGAA---AGU---AGUA----ACGUGAC | ||||| ||| ||| |||||| | --CCCCUUGAAUCAAUGUCAGAAACUGCACUA |
Klhl38 | mmu-miR-138 | 50 | 63 | CUAAGUGUUGUGGUCGA- | :|||| |||||| | ----UGCAAC-CCAGCUC |
Klhl38 | mmu-miR-140 | 192 | 216 | GAUGG--UAUCCCAUU-UUGGUGAC | ||: |||||| |||:||| | -AACUGGAUAGGGAGUUAACUACUU |
Klhl38 | mmu-miR-142-3p | 31 | 55 | -GGUAUUUCAUCCUUUGUGAUGU- | |::|: :||:|||:| |||:|| | GCUGUGUGGUGGGAGAGACUGCAA |
Klhl38 | mmu-miR-143 | 1 | 22 | ACUCGAUGUCACGAAGUAGAGU | |:|| :||| |:||||| | -GGGCCGCAGGAACUUAUCUCU |
Klhl38 | mmu-miR-149 | 41 | 83 | -CCUC----AC-------------UUCUGUGCCUCGG-UCU | |||| || |||:||:|||||: ||| | GGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGCUGAGAG |
Klhl38 | mmu-miR-150 | 30 | 48 | GUGAC-CAUGUUCCCAACCCUCU- | :||| || || ||||||| | GGCUGUGU-----GG-UGGGAGAG |
Klhl38 | mmu-miR-152 | 158 | 188 | -GGGUUCAAG---ACAGU-----ACGUGACU | ||| ||||| |||||| | CCCCUUGAAUCAAUGUCAGAAACUGCACUA- |
Klhl38 | mmu-miR-17-3p | 220 | 237 | AUGUUCACGGGAGUGACGUCA | ||| |||| |||||| | GACA---GCCCAAACUGCAU- |
Klhl38 | mmu-miR-184 | 3 | 28 | UGGGAAUAGUCA------AGAGGCAGGU- | || ||| ||||:||||| | -GCCG---CAGGAACUUAUCUCUGUCCAA |
Klhl38 | mmu-miR-185 | 89 | 108 | CUUGACGGAAAGAGAGGU- | |||| || |||||||| | AAACUACCACUCUCUCCAG |
Klhl38 | mmu-miR-187 | 46 | 75 | GGCCGACGUUGUGU-------UCUGUGCU- | | ||||||| || ||:||:|: | -AGACUGCAACCCAGCUCCAAAGGCAUGGA |
Klhl38 | mmu-miR-196b | 190 | 218 | GGUUG--UUGUCCUU----UGAUGGAU- | :||| :|:|||:| |||||:|: | AUAACUGGAUAGGGAGUUAACUACUUGA |
Klhl38 | mmu-miR-207 | 37 | 78 | CUCCCUCCUCUC-GG---------------UCCU--CUUCG | || :|||||| |: ||| |:||| | -UGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGCU |
Klhl38 | mmu-miR-212 | 29 | 53 | -CCGGCACUGA---C-CUCUGACAAU | |||:||| | ||||||| | AGGCUGUGUGGUGGGAGAGACUGC-- |
Klhl38 | mmu-miR-221 | 52 | 79 | UUUGGGUCG-----UCUGUUACAUCGA- | |||||||| ||:| ||| |||| | CAACCCAGCUCCAAAGGC-AUGGAGCUG |
Klhl38 | mmu-miR-222 | 28 | 54 | CUCUGGGUCAUCGGUCUACAU--CGA | ||:|: ||:|: :|| || | AAGGCUGUGUGGUGGGAGAGACUGCA |
Klhl38 | mmu-miR-24 | 60 | 82 | GACAAGGA---CGA--CUUGACUCGGU | ||| || ||:||||| | ---CUCCAAAGGCAUGGAGCUGAGA-- |
Klhl38 | mmu-miR-26a | 181 | 219 | -CG-GAUAG----GACCUA-----------AUGAACUU | || ||||: |||||| ||||||| | UGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU |
Klhl38 | mmu-miR-26b | 181 | 219 | UUG-GAUAG----GACUUA-----------AUGAACUU | :| ||||: |||:|| ||||||| | UGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU |
Klhl38 | mmu-miR-27a | 5 | 41 | -CG-CCUUGAA-------------UCGGUGACACUU | || ||||||| || | ||||: | CGCAGGAACUUAUCUCUGUCCAAAAGGCUGUGUGGU |
Klhl38 | mmu-miR-27b | 5 | 41 | -CGU-CUUGAA-------------UCGGUGACACUU | ||| |||||| || | ||||: | CGCAGGAACUUAUCUCUGUCCAAAAGGCUGUGUGGU |
Klhl38 | mmu-miR-28 | 45 | 65 | GAGUUAUCUGACAC----UCGAGGAA | |||||| |||||| | -----GAGACUGCAACCCAGCUCCA- |
Klhl38 | mmu-miR-29a | 29 | 54 | -UUGGCUAAAGUCUACC-------ACGAU | ::|:| | |:||| ||| | AGGCUG---UGUGGUGGGAGAGACUGCA- |
Klhl38 | mmu-miR-30a-3p | 48 | 84 | CGACGUU-------------UGUAGGCUGACUUUC- | |||||| :||| :||||:|| | ACUGCAACCCAGCUCCAAAGGCAUGGAGCUGAGAGA |
Klhl38 | mmu-miR-320 | 46 | 63 | AAGCGGGAGAGUUGGGUCGAAAA | | |: |||||||||| | --AGACUG--CAACCCAGCUC-- |
Klhl38 | mmu-miR-324-3p | 55 | 75 | -GGUCGUCGUGGACCCCGUCACC- | ||||| || |||| ||| | CCCAGCU---CCAAAGGCA-UGGA |
Klhl38 | mmu-miR-326 | 30 | 70 | -UGAC-CUCCUUCCC-----------GGGUC------UCC | :||| | || ||| ||||| ||| | GGCUGUGUGGU-GGGAGAGACUGCAACCCAGCUCCAAAGGC |
Klhl38 | mmu-miR-337 | 63 | 82 | -UUUCCGUAGUAUAUCCUCGACUU- | |||||||| ||||||||: | CAAAGGCAU------GGAGCUGAGA |
Klhl38 | mmu-miR-339 | 57 | 76 | ACUCGAGGACCUCCUGUCCCU- | |||||| ||| || ||| | -CAGCUCCAA-AGG-CAUGGAG |
Klhl38 | mmu-miR-340 | 29 | 51 | -CCGAUAUUUCAUUGACUCUGCCU | ||||:|: :||:: ||||| | AGGCUGUGUGGUGGGAGAGACU-- |
Klhl38 | mmu-miR-342 | 29 | 48 | CUGCCCACGCUAAAGACACACUCU- | || ||:| ||| |||| | --AGGCUGUGUG----GUGGGAGAG |
Klhl38 | mmu-miR-377 | 24 | 42 | UGUUUUCAACGGAAACACACUA- | |||||| ||: |||||:| | CCAAAAG--GCU---GUGUGGUG |
Klhl38 | mmu-miR-450b | 40 | 56 | AUAAGUCCUUGUAUGACGUUUU | :|||: ||||||| | ----UGGGAGAG-ACUGCAAC- |
Klhl38 | mmu-miR-455-3p | 32 | 55 | UCACAUAUACGGGCAC--CUGACGUA | |:|:|| : | ||||||| | ---CUGUGUGGUGGGAGAGACUGCAA |
Klhl38 | mmu-miR-483 | 27 | 49 | UGUUCUGC----CCUCCC-CUCCUCACU | |||:| || ||| ||| | -AAAGGCUGUGUGGUGGGAGAGA----- |
Klhl38 | mmu-miR-484 | 39 | 63 | UAGCCCUCCCCUGAC------UCGGACU | :||||| ||||| |||: | -GUGGGAGA-GACUGCAACCCAGCUC-- |
Klhl38 | mmu-miR-488* | 124 | 145 | CUGGUU-CUUUGUCGGAAAGUU- | :|||: ||| ||:|||||| | UGCCAGUGAAU--GCUUUUCAAA |
Klhl38 | mmu-miR-501 | 53 | 73 | AAAGUGGGUCCCUGUUUCC-UAA | |||||| |||||| || | ---AACCCAGCUCCAAAGGCAUG |
Klhl38 | mmu-miR-532 | 39 | 74 | UGCCAG----GAUG------UGAG--UUCCGUAC- | :|| ||:| :||| |||||||| | GUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGG |
Klhl38 | mmu-miR-540 | 6 | 27 | GGUCCUAGC-UGGAGACUGGA | ||||| |:||||| || | GCAGGAACUUAUCUCUGUCCA |
Klhl38 | mmu-miR-542-3p | 6 | 28 | AAAGUC----AAUAGUUAGACAGUGU- | ||| ||||| |||||| || | --GCAGGAACUUAUC--UCUGUC-CAA |
Klhl38 | mmu-miR-615 | 37 | 76 | UUCUCCCUCU--------GGGU--------CCGAGCCU- | :| |||||| |||| ||| :||| | UGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAG |
Klhl38 | mmu-miR-668 | 35 | 85 | CCAUCACCC------------GG---------------CUCGGCUCACUGU | ||:||||| || ||||:||| || | UGUGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGCUGAGAGAA- |
Klhl38 | mmu-miR-673 | 59 | 84 | -GAGGUUCCUG-GUCUCGACACUC- | |||||| |:| ::|||||| ||| | GCUCCAAAGGCAUGGAGCUGAGAGA |
Klhl38 | mmu-miR-677 | 172 | 200 | -AGUCUUCGAU----UAGUAGUGACUU- | |||||| ||: ||:|| ||||:| | GUCAGAAACUGCACUAUUAUAACUGGAU |
Klhl38 | mmu-miR-678 | 55 | 83 | GGAGGUC-AGGAA--CG-----UGGCUCUG | |||| ||| || :|:|||| | --CCCAGCUCCAAAGGCAUGGAGCUGAGAG |
Klhl38 | mmu-miR-682 | 28 | 55 | GUCUGAA--GUGACA----CUGACGUC | ||:|| :: || ||||||| | AAGGCUGUGUGGUGGGAGAGACUGCAA |
Klhl38 | mmu-miR-693-3p | 1 | 37 | AAUGUCGGUGU----------AGAC-----UUUCGACG- | :|||:|| |||| ||:||||: | ---GGGCCGCAGGAACUUAUCUCUGUCCAAAAGGCUGUG |
Klhl38 | mmu-miR-702 | 29 | 45 | CUCGCCCCAUUUCCCACCCGU | :|| ||: |||||| | AGGCU--GUGU--GGUGGGA- |
Klhl38 | mmu-miR-710 | 12 | 41 | -GAGUUGAGAGGGGU--UCUGA---ACC- | ||:| |||| :||| ||:|| ||| | ACUUAUCUCUGUCCAAAAGGCUGUGUGGU |
Klhl38 | mmu-miR-715 | 34 | 77 | GUGCGCC-CCCA--------------CA-------CGUGCCUC | :|:|| ||| | |||:|||| | -GUGUGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGC |
Klhl38 | mmu-miR-718 | 21 | 47 | GCUGUGGG---CCGGC---CCGCCUUC- | | || |||:| ||:||:|| | UGU--CCAAAAGGCUGUGUGGUGGGAGA |
Klhl38 | mmu-miR-762 | 17 | 65 | CGAGACAGG-----------GCCG--------------GGGUCGGGG | |||||||| :||: ||||||:|| | UCUCUGUCCAAAAGGCUGUGUGGUGGGAGAGACUGCAACCCAGCUCCA |
Klhl38 | mmu-miR-185 | 99 | 106 | ---------CUUGAC----------------GGAAAGAGAGGU | ||:||| || |||||||| | AAAGGCAUGGAGCUGAGAGAAGUCAAAACUACCACUCUCUCCAG |
Klhl38 | mmu-miR-26a | 211 | 218 | ------CG-GAUAG----GACCUA-----------AUGAACUU | || ||||: |||||| ||||||| | GAAACUGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU |
Klhl38 | mmu-miR-26b | 211 | 218 | U-----UG-GAUAG----GACUUA-----------AUGAACUU | :| ||||: |||:|| ||||||| | GAAACUGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU |
Klhl38 | mmu-miR-337 | 73 | 80 | --------------------------UUUCCGUAGUAUAUCCUCGACUU | |||||||| ||||||||: | GGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAU------GGAGCUGAGA |
Klhl38 | mmu-miR-455-3p | 47 | 54 | -----------------UCACAUAUACGGGCA-C-CUGACGUA | || |:|:|| : | | ||||||| | ACUUAUCUCUGUCCAAAAGGCUGUGUGGUGGGAGAGACUGCAA |
Klhl38 | mmu-miR-532 | 65 | 72 | U---------GCCAG----GAUG------UGAG--UUCCGUAC | :|| ||:| :||| |||||||| | GGCUGUGUGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGG |
Klhl38 | mmu-miR-682 | 47 | 54 | G----------------UCUGAA--GUGACA----CUGACGUC | ||:|| :: || ||||||| | ACUUAUCUCUGUCCAAAAGGCUGUGUGGUGGGAGAGACUGCAA |
Klhl38 | mmu-miR-103 | 12 | 36 | aGUAUCGGGACAUG--UUACGACga | | || |:|||| | || |||| | aCTTATCTCTGTCCAAAAGGCTGtg |
Klhl38 | mmu-miR-130b | 156 | 187 | uacGGGAA---AGU---AG----UAACGUGAc | ||||| ||| || | |||||| | tacCCCTTGAATCAATGTCAGAAACTGCACTa |
Klhl38 | mmu-miR-138 | 47 | 61 | CUAAGUGUUGUGGUCGA | || | :|||| |||||| | GACT-GCAAC-CCAGCT |
Klhl38 | mmu-miR-140 | 193 | 215 | gauggUAUCCCAU-UUUGGUGAc | |||||| : |||:||| | actggATAGGGAGTTAACTACTt |
Klhl38 | mmu-miR-142-3p | 32 | 53 | GGUAUUUCAUCCUUUGUGAUGU | |::|: :||:|||:| |||:|| | CTGTGTGGTGGGAGAGACTGCA |
Klhl38 | mmu-miR-149 | 59 | 81 | ccucacUUCUGUGCCUCGG-UCU | |||:||:|||||: ||| | gctccaAAGGCATGGAGCTGAGA |
Klhl38 | mmu-miR-150 | 18 | 46 | GUGACCAUG--UUCC------CAACCCUCU | | || || | |||| | ||||||| | CTCT-GTCCAAAAGGCTGTGTGGTGGGAGA |
Klhl38 | mmu-miR-152 | 159 | 188 | GGGUUC-AAG--ACAGU-----ACGUGAcu | ||| | || ||||| |||||| | CCCTTGAATCAATGTCAGAAACTGCACTat |
Klhl38 | mmu-miR-17-3p | 220 | 237 | aUGUUCACGGGAGUGACGUca | ||| |||| |||||| | gACA---GCCCAAACTGCAtt |
Klhl38 | mmu-miR-184 | 10 | 26 | uggGAAUAGUCAAGAGGCAGGU | |||| ||||:||||| | gaaCTTA-----TCTCTGTCCA |
Klhl38 | mmu-miR-185 | 89 | 106 | cUUGACGGAAAGAGAGGU | |||| || |||||||| | aAACTACCACTCTCTCCA |
Klhl38 | mmu-miR-187 | 45 | 73 | ggCCGACGUUGUG-------UUCUGUGCu | | ||||||| | |||:||:| | gaGACTGCAACCCAGCTCCAAAGGCATGg |
Klhl38 | mmu-miR-207 | 65 | 86 | cUCCCUCCUCUCGGUCCUCUUCg | ||| | | ||||:: |||||| | aAGGCATG-GAGCTGAGAGAAGt |
Klhl38 | mmu-miR-212 | 30 | 54 | CCGGCAC-UGAC---CUCUGACaau | |||:||| : || ||||||| | GGCTGTGTGGTGGGAGAGACTGcaa |
Klhl38 | mmu-miR-222 | 51 | 77 | cucUGGGUCAUCGGU---C-UACAUCGA | |||||| ||| | ||| |||| | gcaACCCAG-CTCCAAAGGCATGGAGCT |
Klhl38 | mmu-miR-24 | 57 | 83 | GACAAGG---ACG-A-CUUGACUCggu | | | ||| || | ||:||||| | CAGCTCCAAAGGCATGGAGCTGAGaga |
Klhl38 | mmu-miR-26a | 182 | 218 | CG-GAUAG----GACCUA-----------AUGAACUu | || ||||: |||||| ||||||| | GCACTATTATAACTGGATAGGGAGTTAACTACTTGAt |
Klhl38 | mmu-miR-27a | 6 | 38 | CG-CCUUGAAU-----C-GG-----UGACACuu | || |||||||| | || :||||| | GCAGGAACTTATCTCTGTCCAAAAGGCTGTGtg |
Klhl38 | mmu-miR-27b | 6 | 38 | CGU-CUUGAAU-----C-GG-----UGACACuu | ||| ||||||| | || :||||| | GCAGGAACTTATCTCTGTCCAAAAGGCTGTGtg |
Klhl38 | mmu-miR-28 | 40 | 65 | gaguUAUCUGAC----ACUCGAGGaa | | |||||| |||||| | tgggAGAGACTGCAACCCAGCTCCaa |
Klhl38 | mmu-miR-29a | 53 | 78 | UUGGCUAAAG---UC--UACCACGAu | |||| | || || |||| ||| | AACCCAGCTCCAAAGGCATGGAGCTg |
Klhl38 | mmu-miR-30a-3p | 59 | 82 | CGACGUUU--GUAGGCUGACUUUC | ||| |||| ||| :||||:|| | GCTCCAAAGGCATGGAGCTGAGAG |
Klhl38 | mmu-miR-320 | 41 | 64 | aagcgggaGA-GUUGGGUCGAaaa | || |||||||||| | gggagagaCTGCAACCCAGCTcca |
Klhl38 | mmu-miR-326 | 35 | 62 | ugACCUCCUUCCC-------GGGUCucc | ||| ||:|| | ||||| | tgTGGTGGGAGAGACTGCAACCCAGctc |
Klhl38 | mmu-miR-337 | 64 | 80 | UUUCCGUAGUAUAUCCUCGACUu | |||||||| |||||||| | AAAGGCAT------GGAGCTGAg |
Klhl38 | mmu-miR-339 | 56 | 74 | acUCGAGGACCUCCUGUCCCU | |||||| | |:|| ||| | ccAGCTCC--AAAGGCATGGA |
Klhl38 | mmu-miR-340 | 30 | 52 | CCGAUAUUUCAUUGACUCUGCCu | ||||:|: :||:: ||||| | | GGCTGTGTGGTGGGAGAGACTGc |
Klhl38 | mmu-miR-342 | 27 | 46 | cUGCCCACGCUAAAGACACACUCU | | || ||:| : ||| |||| | aAAGGCTGTG----TGGTGGGAGA |
Klhl38 | mmu-miR-450b | 35 | 56 | auaaguCCUUGUAUGACGUUuu | ||:| | ||||||| | tgtggtGGGAGAGACTGCAAcc |
Klhl38 | mmu-miR-455-3p | 31 | 54 | ucACAUAUACGGGCAC-CUGACGUa | |||:|: |: | | ||||||| | gcTGTGTG-GTGGGAGAGACTGCAa |
Klhl38 | mmu-miR-483 | 26 | 48 | UGUUCUGCCCUCCCCUCCUCACU | | |||:| | : || :|||| || | AAAAGGCTGTGTGGTGGGAGAGA |
Klhl38 | mmu-miR-484 | 33 | 52 | uagCCCUCCCCUGACUCGGACu | | |: |||| ||| ||| | tgtGTGGTGGGA--GAGACTGc |
Klhl38 | mmu-miR-501 | 50 | 71 | aaagUGGGUCCCUGUUUCCuaa | |||||| |||||| | tgcaACCCAGCTCCAAAGGcat |
Klhl38 | mmu-miR-532 | 51 | 72 | ugccaGGAUGUGAGUUCCGUAC | || :| | |||||||| | gcaacCCAGCTCCAAAGGCATG |
Klhl38 | mmu-miR-542-3p | 4 | 27 | aaaGUC----AAUAGUUAGACAGugu | ||| ||||| |||||| | ccgCAGGAACTTATC--TCTGTCcaa |
Klhl38 | mmu-miR-615 | 51 | 74 | uucucccUCUGGG--UCCGAGCCU | || :|| |||| :||| | gcaacccAGCTCCAAAGGCATGGA |
Klhl38 | mmu-miR-668 | 30 | 50 | CCAUCACCCGGCUCGGCUCACUGu | || ||| | :| | ||| ||| | GGCTGTGTGGTG-G--GAGAGACt |
Klhl38 | mmu-miR-673 | 60 | 82 | GAGGUUCCUG-GUCUCGACACUC | |||||| |:| ::|||||| ||| | CTCCAAAGGCATGGAGCTGAGAG |
Klhl38 | mmu-miR-677 | 173 | 198 | AGUCUUCGAU----UAGUAGUGACUU | |||||| ||: ||:|| ||||:| | TCAGAAACTGCACTATTATAACTGGA |
Klhl38 | mmu-miR-678 | 59 | 82 | gGAGG--UCAGGAACGUGGCUCUg | |||| || | | | :|:|||| | gCTCCAAAGGCATGGAGCTGAGAg |
Klhl38 | mmu-miR-682 | 28 | 54 | gUCUGAAGUGACA------CUGACGUc | ||:|| ::: || ||||||| | aAGGCTGTGTGGTGGGAGAGACTGCAa |
Klhl38 | mmu-miR-693-3p | 4 | 35 | aauGUCGGUG--U--AGAC-----UUUCGACg | ||| || | |||| ||:|||| | ccgCAGGAACTTATCTCTGTCCAAAAGGCTGt |
Klhl38 | mmu-miR-702 | 29 | 45 | cuCGCCCCAUUUCCCACCCgu | || | || |||||| | agGCTGTGT----GGTGGGag |
Klhl38 | mmu-miR-710 | 13 | 37 | GAGUUGAGAGGGG--UUCUGA-ACc | ||:| |||| :|| |||:|| || | CTTATCTCTGTCCAAAAGGCTGTGt |
Klhl38 | mmu-miR-715 | 55 | 75 | gugcgcccccacaCGUGCCUC | |||:|||| | cccagctccaaagGCATGGAG |
Klhl38 | mmu-miR-718 | 22 | 45 | gcuGUGGGCCGGC---CCGCCUUC | || |||:| ||:||:|| | gtcCAAAAGGCTGTGTGGTGGGAG |
Klhl38 | mmu-miR-762 | 40 | 63 | cgagacaggGCCG--GGGUCGGGG | | || ||||||:|| | tgggagagaCTGCAACCCAGCTCC |