DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004526 mmu-miR-101a* 268807 Klhl38 cgUAGUCGUGACACUAUUGACu | | ||||| | ||||||| gaAACUGCACUAUUAUAACUGg 2 21 176 197 [mm9:15:58146185-58146206:-] 0.5093 168 7 -17.59 -0.7642 MIMAT0004541 mmu-miR-188-3p 268807 Klhl38 acgUUUGGGACGUA-CACCCUc ||| |||::| |||||| ccaAAAGGCUGUGUGGUGGGAg 2 19 24 45 [mm9:15:58146337-58146358:-] 0.4911 130 6 -22.07 -0.2054 MIMAT0000578 mmu-miR-337-3p 268807 Klhl38 uccguaguaUAUCCUCGACUu || |||||||| uccaaaggcAU-GGAGCUGAg 2 13 61 80 [mm9:15:58146302-58146321:-] 0.4929 146 7 -22.74 -0.1344 MIMAT0004660 mmu-miR-19a* 268807 Klhl38 caUC-ACGUUGAUACGUUUUGAu || || :| | ||||||| ggAGCUGAGAGAAGUCAAAACUa 2 21 72 94 [mm9:15:58146288-58146310:-] 0.4615 147 7 -10.15 -0.7623 MIMAT0004660 mmu-miR-19a* 268807 Klhl38 caucACGUUGAUAC-GU-UUUGAu || | | ||| || ||||| cccuUGAAUCAAUGUCAGAAACUg 2 19 159 182 [mm9:15:58146200-58146223:-] 0.5140 121 0 -8.30 -0.6980 MIMAT0004691 mmu-miR-382* 268807 Klhl38 uuuuucacaACAGGCACUUACu || | ||||||| uucuuaaaaUGCCAGUGAAUGc 2 14 115 136 [mm9:15:58146246-58146267:-] 0.4997 149 7 -12.65 -0.7826 MIMAT0004781 mmu-miR-532-3p 268807 Klhl38 acgUUCGGAACCCACACCCUCc |:||: || | ||||||| aaaAGGCUGUGUG-GUGGGAGa 2 20 26 46 [mm9:15:58146336-58146356:-] 0.4911 157 7 -19.71 -0.4295 MIMAT0003459 mmu-miR-682 268807 Klhl38 gucugaagugaCACUGACGUc | ||||||| guguggugggaGAGACUGCAa 2 11 34 54 [mm9:15:58146328-58146348:-] 0.5475 142 7 -13.59 -0.3939 MIMAT0003474 mmu-miR-694 268807 Klhl38 gaaguccguuguAAAAGUc |||||| gccagugaaugcUUUUCAa 2 8 125 143 [mm9:15:58146239-58146257:-] 0.4997 120 6 -7.26 -0.1136 MIMAT0003508 mmu-miR-501-5p 268807 Klhl38 aaagUGGGUCCCUGUUUCC-UAa |||||| |||||| || ugcaACCCAGCUCCAAAGGCAUg 2 19 50 72 [mm9:15:58146310-58146332:-] 0.4929 130 0 -18.84 -0.1042 MIMAT0004863 mmu-miR-220 268807 Klhl38 uucacagaCUGUGACACCACc |:| ||||||| guccaaaaGGCUGUGUGGUGg 2 14 22 42 [mm9:15:58146340-58146360:-] 0.4911 145 7 -19.82 -0.1791 MIMAT0007868 mmu-miR-1903 268807 Klhl38 acagaGUCCUUCUUCU-UCUUCc || |:|| || ||||| aaaggCAUGGAGCUGAGAGAAGu 2 18 64 86 [mm9:15:58146296-58146318:-] 0.4902 121 0 -12.67 -0.1253 MIMAT0007878 mmu-miR-1894-3p 268807 Klhl38 gaggGAAGUGGGAG-AGGGAACg :| ||:|||: |||||| aaaaUUCCAUCCUUACCCCUUGa 2 19 143 165 [mm9:15:58146217-58146239:-] 0.5140 129 6 -21.64 -0.2153 MIMAT0009413 mmu-miR-1947 268807 Klhl38 guCGUGAGUCGAUCGAG-CAGGa ||| | :|| ||| |||| ccGCAGGAACUUAUCUCUGUCCa 2 21 4 26 [mm9:15:58146356-58146378:-] 0.4346 120 0 -16.28 -0.3074 MIMAT0009430 mmu-miR-1957 268807 Klhl38 caguauacgaGAUGGUGAc |||||||| gaagucaaaaCUACCACUc 2 10 82 100 [mm9:15:58146282-58146300:-] 0.4615 145 7 -15.05 -0.2402 MIMAT0011212 mmu-miR-2136 268807 Klhl38 guguaGAGUCAGUUGU-GGGUc ||:: |::||| |||| aacuaCUUGAUUGACAGCCCAa 2 17 208 229 [mm9:15:58146153-58146174:-] 0.5073 120 0 -12.42 -0.9269 MIMAT0011216 mmu-miR-2140 268807 Klhl38 ugGUGGUUCUAGACGUGGa :::||: | ||||||: aaUGUCAGAAACUGCACUa 2 18 169 187 [mm9:15:58146195-58146213:-] 0.5140 137 0 -13.31 -0.1697 MIMAT0015645 mmu-miR-3473 268807 Klhl38 ccgacucGGU-AGAGAGGu ||| ||||||| aaaacuaCCACUCUCUCCa 2 12 88 106 [mm9:15:58146276-58146294:-] 0.4847 146 7 -18.90 -0.5599 MIMAT0000141 mmu-miR-130a 268807 Klhl38 uacgggaaaauuguaACGUGAc |||||| aucaaugucagaaacUGCACUa 2 8 166 187 [mm9:15:58146195-58146216:-] 0.5140 120 6 -11.75 -0.1931 MIMAT0000157 mmu-miR-145 268807 Klhl38 ucccuaagGACCCUUUUGACCUg || | ||||||| aaacugcaCUAUUAUAACUGGAu 2 16 177 199 [mm9:15:58146183-58146205:-] 0.5093 143 7 -12.03 -0.9379 MIMAT0000214 mmu-miR-185 268807 Klhl38 aguccUUGACGGAAAGAGAGGu |||| || ||||||| gucaaAACUACCACUCUCUCCa 2 18 85 106 [mm9:15:58146276-58146297:-] 0.4847 161 7 -22.16 -0.5455 MIMAT0000379 mmu-miR-301a 268807 Klhl38 cgaaacuguuaugauaACGUGAc |||||| aaucaaugucagaaacUGCACUa 2 8 165 187 [mm9:15:58146195-58146217:-] 0.5140 120 6 -9.36 -0.1931 MIMAT0000387 mmu-miR-130b 268807 Klhl38 uacgggaaaguaguaACGUGAc |||||| aucaaugucagaaacUGCACUa 2 8 166 187 [mm9:15:58146195-58146216:-] 0.5140 120 6 -10.06 -0.1895 MIMAT0000533 mmu-miR-26a 268807 Klhl38 ucggauaggaccUAAUGAACUu | ||||||| gauagggaguuaACUACUUGAu 2 11 197 218 [mm9:15:58146164-58146185:-] 0.5073 142 7 -9.66 -0.5184 MIMAT0000534 mmu-miR-26b 268807 Klhl38 uggauaggACUUAAUGAACUu | || ||||||| auagggagUUAACUACUUGAu 2 14 198 218 [mm9:15:58146164-58146184:-] 0.5073 149 7 -8.85 -0.5184 MIMAT0000665 mmu-miR-223 268807 Klhl38 accccaUAAACUGUUUGAC-UGu || | | |||||| || gaaucaAUGUCAGAAACUGCACu 2 17 164 186 [mm9:15:58146196-58146218:-] 0.5140 120 0 -6.43 -1.0388 MIMAT0004684 mmu-miR-362-3p 268807 Klhl38 acuUAGGAAC---UUGUCC-ACACAa |||: || || ||| ||||| cuuAUCUCUGUCCAAAAGGCUGUGUg 2 20 13 38 [mm9:15:58146344-58146369:-] 0.4911 122 0 -13.63 -0.1427 MIMAT0004186 mmu-miR-301b 268807 Klhl38 cgaAACU--GUUAUGG----UAACGUGAc |||| ||||::| | |||||| cccUUGAAUCAAUGUCAGAAACUGCACUa 2 21 159 187 [mm9:15:58146195-58146223:-] 0.5140 126 6 -16.94 -0.1931 MIMAT0003727 mmu-miR-374 268807 Klhl38 gugaaucguccaacAUAAUAUa ||||||| gucagaaacugcacUAUUAUAa 2 9 172 193 [mm9:15:58146189-58146210:-] 0.5093 140 7 -4.32 -0.5778 MIMAT0003515 mmu-miR-721 268807 Klhl38 aagggggaaaauuaACGUGAc |||||| ucaaugucagaaacUGCACUa 2 8 167 187 [mm9:15:58146195-58146215:-] 0.5140 120 6 -6.39 -0.1986 MIMAT0004847 mmu-miR-882 268807 Klhl38 ugauuacgcGAU--UGAGAGAGGa ||| ||||||||| aagucaaaaCUACCACUCUCUCCa 2 14 83 106 [mm9:15:58146276-58146299:-] 0.4847 152 7 -17.74 -0.5635 MIMAT0004941 mmu-miR-544 268807 Klhl38 cucGAACGAUUUUUAC-GUCUUa |||| | |||| ||||| cccCUUG-AAUCAAUGUCAGAAa 2 20 158 179 [mm9:15:58146203-58146224:-] 0.5140 121 0 -11.41 -1.0146

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G041029 Klhl38 Mus musculus 268807

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Klhl38 mmu-miR-103 1 37 AGUAUCGG--------------GACAUGUUA--CGACGA :||| |||| ||| ||||: ---GGGCCGCAGGAACUUAUCUCUGUCCAAAAGGCUGUG Klhl38 mmu-miR-127 54 81 CGGUUCGAG---UCUG--CCUAGGCU- || ||||| ||:| ||| |:|| ACCCAGCUCCAAAGGCAUGGAGCUGAG Klhl38 mmu-miR-130b 158 188 UACGGGAA---AGU---AGUA----ACGUGAC ||||| ||| ||| |||||| --CCCCUUGAAUCAAUGUCAGAAACUGCACUA Klhl38 mmu-miR-138 50 63 CUAAGUGUUGUGGUCGA- :|||| |||||| ----UGCAAC-CCAGCUC Klhl38 mmu-miR-140 192 216 GAUGG--UAUCCCAUU-UUGGUGAC ||: |||||| |||:||| -AACUGGAUAGGGAGUUAACUACUU Klhl38 mmu-miR-142-3p 31 55 -GGUAUUUCAUCCUUUGUGAUGU- |::|: :||:|||:| |||:|| GCUGUGUGGUGGGAGAGACUGCAA Klhl38 mmu-miR-143 1 22 ACUCGAUGUCACGAAGUAGAGU |:|| :||| |:||||| -GGGCCGCAGGAACUUAUCUCU Klhl38 mmu-miR-149 41 83 -CCUC----AC-------------UUCUGUGCCUCGG-UCU |||| || |||:||:|||||: ||| GGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGCUGAGAG Klhl38 mmu-miR-150 30 48 GUGAC-CAUGUUCCCAACCCUCU- :||| || || ||||||| GGCUGUGU-----GG-UGGGAGAG Klhl38 mmu-miR-152 158 188 -GGGUUCAAG---ACAGU-----ACGUGACU ||| ||||| |||||| CCCCUUGAAUCAAUGUCAGAAACUGCACUA- Klhl38 mmu-miR-17-3p 220 237 AUGUUCACGGGAGUGACGUCA ||| |||| |||||| GACA---GCCCAAACUGCAU- Klhl38 mmu-miR-184 3 28 UGGGAAUAGUCA------AGAGGCAGGU- || ||| ||||:||||| -GCCG---CAGGAACUUAUCUCUGUCCAA Klhl38 mmu-miR-185 89 108 CUUGACGGAAAGAGAGGU- |||| || |||||||| AAACUACCACUCUCUCCAG Klhl38 mmu-miR-187 46 75 GGCCGACGUUGUGU-------UCUGUGCU- | ||||||| || ||:||:|: -AGACUGCAACCCAGCUCCAAAGGCAUGGA Klhl38 mmu-miR-196b 190 218 GGUUG--UUGUCCUU----UGAUGGAU- :||| :|:|||:| |||||:|: AUAACUGGAUAGGGAGUUAACUACUUGA Klhl38 mmu-miR-207 37 78 CUCCCUCCUCUC-GG---------------UCCU--CUUCG || :|||||| |: ||| |:||| -UGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGCU Klhl38 mmu-miR-212 29 53 -CCGGCACUGA---C-CUCUGACAAU |||:||| | ||||||| AGGCUGUGUGGUGGGAGAGACUGC-- Klhl38 mmu-miR-221 52 79 UUUGGGUCG-----UCUGUUACAUCGA- |||||||| ||:| ||| |||| CAACCCAGCUCCAAAGGC-AUGGAGCUG Klhl38 mmu-miR-222 28 54 CUCUGGGUCAUCGGUCUACAU--CGA ||:|: ||:|: :|| || AAGGCUGUGUGGUGGGAGAGACUGCA Klhl38 mmu-miR-24 60 82 GACAAGGA---CGA--CUUGACUCGGU ||| || ||:||||| ---CUCCAAAGGCAUGGAGCUGAGA-- Klhl38 mmu-miR-26a 181 219 -CG-GAUAG----GACCUA-----------AUGAACUU || ||||: |||||| ||||||| UGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU Klhl38 mmu-miR-26b 181 219 UUG-GAUAG----GACUUA-----------AUGAACUU :| ||||: |||:|| ||||||| UGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU Klhl38 mmu-miR-27a 5 41 -CG-CCUUGAA-------------UCGGUGACACUU || ||||||| || | ||||: CGCAGGAACUUAUCUCUGUCCAAAAGGCUGUGUGGU Klhl38 mmu-miR-27b 5 41 -CGU-CUUGAA-------------UCGGUGACACUU ||| |||||| || | ||||: CGCAGGAACUUAUCUCUGUCCAAAAGGCUGUGUGGU Klhl38 mmu-miR-28 45 65 GAGUUAUCUGACAC----UCGAGGAA |||||| |||||| -----GAGACUGCAACCCAGCUCCA- Klhl38 mmu-miR-29a 29 54 -UUGGCUAAAGUCUACC-------ACGAU ::|:| | |:||| ||| AGGCUG---UGUGGUGGGAGAGACUGCA- Klhl38 mmu-miR-30a-3p 48 84 CGACGUU-------------UGUAGGCUGACUUUC- |||||| :||| :||||:|| ACUGCAACCCAGCUCCAAAGGCAUGGAGCUGAGAGA Klhl38 mmu-miR-320 46 63 AAGCGGGAGAGUUGGGUCGAAAA | |: |||||||||| --AGACUG--CAACCCAGCUC-- Klhl38 mmu-miR-324-3p 55 75 -GGUCGUCGUGGACCCCGUCACC- ||||| || |||| ||| CCCAGCU---CCAAAGGCA-UGGA Klhl38 mmu-miR-326 30 70 -UGAC-CUCCUUCCC-----------GGGUC------UCC :||| | || ||| ||||| ||| GGCUGUGUGGU-GGGAGAGACUGCAACCCAGCUCCAAAGGC Klhl38 mmu-miR-337 63 82 -UUUCCGUAGUAUAUCCUCGACUU- |||||||| ||||||||: CAAAGGCAU------GGAGCUGAGA Klhl38 mmu-miR-339 57 76 ACUCGAGGACCUCCUGUCCCU- |||||| ||| || ||| -CAGCUCCAA-AGG-CAUGGAG Klhl38 mmu-miR-340 29 51 -CCGAUAUUUCAUUGACUCUGCCU ||||:|: :||:: ||||| AGGCUGUGUGGUGGGAGAGACU-- Klhl38 mmu-miR-342 29 48 CUGCCCACGCUAAAGACACACUCU- || ||:| ||| |||| --AGGCUGUGUG----GUGGGAGAG Klhl38 mmu-miR-377 24 42 UGUUUUCAACGGAAACACACUA- |||||| ||: |||||:| CCAAAAG--GCU---GUGUGGUG Klhl38 mmu-miR-450b 40 56 AUAAGUCCUUGUAUGACGUUUU :|||: ||||||| ----UGGGAGAG-ACUGCAAC- Klhl38 mmu-miR-455-3p 32 55 UCACAUAUACGGGCAC--CUGACGUA |:|:|| : | ||||||| ---CUGUGUGGUGGGAGAGACUGCAA Klhl38 mmu-miR-483 27 49 UGUUCUGC----CCUCCC-CUCCUCACU |||:| || ||| ||| -AAAGGCUGUGUGGUGGGAGAGA----- Klhl38 mmu-miR-484 39 63 UAGCCCUCCCCUGAC------UCGGACU :||||| ||||| |||: -GUGGGAGA-GACUGCAACCCAGCUC-- Klhl38 mmu-miR-488* 124 145 CUGGUU-CUUUGUCGGAAAGUU- :|||: ||| ||:|||||| UGCCAGUGAAU--GCUUUUCAAA Klhl38 mmu-miR-501 53 73 AAAGUGGGUCCCUGUUUCC-UAA |||||| |||||| || ---AACCCAGCUCCAAAGGCAUG Klhl38 mmu-miR-532 39 74 UGCCAG----GAUG------UGAG--UUCCGUAC- :|| ||:| :||| |||||||| GUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGG Klhl38 mmu-miR-540 6 27 GGUCCUAGC-UGGAGACUGGA ||||| |:||||| || GCAGGAACUUAUCUCUGUCCA Klhl38 mmu-miR-542-3p 6 28 AAAGUC----AAUAGUUAGACAGUGU- ||| ||||| |||||| || --GCAGGAACUUAUC--UCUGUC-CAA Klhl38 mmu-miR-615 37 76 UUCUCCCUCU--------GGGU--------CCGAGCCU- :| |||||| |||| ||| :||| UGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAG Klhl38 mmu-miR-668 35 85 CCAUCACCC------------GG---------------CUCGGCUCACUGU ||:||||| || ||||:||| || UGUGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGCUGAGAGAA- Klhl38 mmu-miR-673 59 84 -GAGGUUCCUG-GUCUCGACACUC- |||||| |:| ::|||||| ||| GCUCCAAAGGCAUGGAGCUGAGAGA Klhl38 mmu-miR-677 172 200 -AGUCUUCGAU----UAGUAGUGACUU- |||||| ||: ||:|| ||||:| GUCAGAAACUGCACUAUUAUAACUGGAU Klhl38 mmu-miR-678 55 83 GGAGGUC-AGGAA--CG-----UGGCUCUG |||| ||| || :|:|||| --CCCAGCUCCAAAGGCAUGGAGCUGAGAG Klhl38 mmu-miR-682 28 55 GUCUGAA--GUGACA----CUGACGUC ||:|| :: || ||||||| AAGGCUGUGUGGUGGGAGAGACUGCAA Klhl38 mmu-miR-693-3p 1 37 AAUGUCGGUGU----------AGAC-----UUUCGACG- :|||:|| |||| ||:||||: ---GGGCCGCAGGAACUUAUCUCUGUCCAAAAGGCUGUG Klhl38 mmu-miR-702 29 45 CUCGCCCCAUUUCCCACCCGU :|| ||: |||||| AGGCU--GUGU--GGUGGGA- Klhl38 mmu-miR-710 12 41 -GAGUUGAGAGGGGU--UCUGA---ACC- ||:| |||| :||| ||:|| ||| ACUUAUCUCUGUCCAAAAGGCUGUGUGGU Klhl38 mmu-miR-715 34 77 GUGCGCC-CCCA--------------CA-------CGUGCCUC :|:|| ||| | |||:|||| -GUGUGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGGAGC Klhl38 mmu-miR-718 21 47 GCUGUGGG---CCGGC---CCGCCUUC- | || |||:| ||:||:|| UGU--CCAAAAGGCUGUGUGGUGGGAGA Klhl38 mmu-miR-762 17 65 CGAGACAGG-----------GCCG--------------GGGUCGGGG |||||||| :||: ||||||:|| UCUCUGUCCAAAAGGCUGUGUGGUGGGAGAGACUGCAACCCAGCUCCA Klhl38 mmu-miR-185 99 106 ---------CUUGAC----------------GGAAAGAGAGGU ||:||| || |||||||| AAAGGCAUGGAGCUGAGAGAAGUCAAAACUACCACUCUCUCCAG Klhl38 mmu-miR-26a 211 218 ------CG-GAUAG----GACCUA-----------AUGAACUU || ||||: |||||| ||||||| GAAACUGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU Klhl38 mmu-miR-26b 211 218 U-----UG-GAUAG----GACUUA-----------AUGAACUU :| ||||: |||:|| ||||||| GAAACUGCACUAUUAUAACUGGAUAGGGAGUUAACUACUUGAU Klhl38 mmu-miR-337 73 80 --------------------------UUUCCGUAGUAUAUCCUCGACUU |||||||| ||||||||: GGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAU------GGAGCUGAGA Klhl38 mmu-miR-455-3p 47 54 -----------------UCACAUAUACGGGCA-C-CUGACGUA || |:|:|| : | | ||||||| ACUUAUCUCUGUCCAAAAGGCUGUGUGGUGGGAGAGACUGCAA Klhl38 mmu-miR-532 65 72 U---------GCCAG----GAUG------UGAG--UUCCGUAC :|| ||:| :||| |||||||| GGCUGUGUGGUGGGAGAGACUGCAACCCAGCUCCAAAGGCAUGG Klhl38 mmu-miR-682 47 54 G----------------UCUGAA--GUGACA----CUGACGUC ||:|| :: || ||||||| ACUUAUCUCUGUCCAAAAGGCUGUGUGGUGGGAGAGACUGCAA Klhl38 mmu-miR-103 12 36 aGUAUCGGGACAUG--UUACGACga | || |:|||| | || |||| aCTTATCTCTGTCCAAAAGGCTGtg Klhl38 mmu-miR-130b 156 187 uacGGGAA---AGU---AG----UAACGUGAc ||||| ||| || | |||||| tacCCCTTGAATCAATGTCAGAAACTGCACTa Klhl38 mmu-miR-138 47 61 CUAAGUGUUGUGGUCGA || | :|||| |||||| GACT-GCAAC-CCAGCT Klhl38 mmu-miR-140 193 215 gauggUAUCCCAU-UUUGGUGAc |||||| : |||:||| actggATAGGGAGTTAACTACTt Klhl38 mmu-miR-142-3p 32 53 GGUAUUUCAUCCUUUGUGAUGU |::|: :||:|||:| |||:|| CTGTGTGGTGGGAGAGACTGCA Klhl38 mmu-miR-149 59 81 ccucacUUCUGUGCCUCGG-UCU |||:||:|||||: ||| gctccaAAGGCATGGAGCTGAGA Klhl38 mmu-miR-150 18 46 GUGACCAUG--UUCC------CAACCCUCU | || || | |||| | ||||||| CTCT-GTCCAAAAGGCTGTGTGGTGGGAGA Klhl38 mmu-miR-152 159 188 GGGUUC-AAG--ACAGU-----ACGUGAcu ||| | || ||||| |||||| CCCTTGAATCAATGTCAGAAACTGCACTat Klhl38 mmu-miR-17-3p 220 237 aUGUUCACGGGAGUGACGUca ||| |||| |||||| gACA---GCCCAAACTGCAtt Klhl38 mmu-miR-184 10 26 uggGAAUAGUCAAGAGGCAGGU |||| ||||:||||| gaaCTTA-----TCTCTGTCCA Klhl38 mmu-miR-185 89 106 cUUGACGGAAAGAGAGGU |||| || |||||||| aAACTACCACTCTCTCCA Klhl38 mmu-miR-187 45 73 ggCCGACGUUGUG-------UUCUGUGCu | ||||||| | |||:||:| gaGACTGCAACCCAGCTCCAAAGGCATGg Klhl38 mmu-miR-207 65 86 cUCCCUCCUCUCGGUCCUCUUCg ||| | | ||||:: |||||| aAGGCATG-GAGCTGAGAGAAGt Klhl38 mmu-miR-212 30 54 CCGGCAC-UGAC---CUCUGACaau |||:||| : || ||||||| GGCTGTGTGGTGGGAGAGACTGcaa Klhl38 mmu-miR-222 51 77 cucUGGGUCAUCGGU---C-UACAUCGA |||||| ||| | ||| |||| gcaACCCAG-CTCCAAAGGCATGGAGCT Klhl38 mmu-miR-24 57 83 GACAAGG---ACG-A-CUUGACUCggu | | ||| || | ||:||||| CAGCTCCAAAGGCATGGAGCTGAGaga Klhl38 mmu-miR-26a 182 218 CG-GAUAG----GACCUA-----------AUGAACUu || ||||: |||||| ||||||| GCACTATTATAACTGGATAGGGAGTTAACTACTTGAt Klhl38 mmu-miR-27a 6 38 CG-CCUUGAAU-----C-GG-----UGACACuu || |||||||| | || :||||| GCAGGAACTTATCTCTGTCCAAAAGGCTGTGtg Klhl38 mmu-miR-27b 6 38 CGU-CUUGAAU-----C-GG-----UGACACuu ||| ||||||| | || :||||| GCAGGAACTTATCTCTGTCCAAAAGGCTGTGtg Klhl38 mmu-miR-28 40 65 gaguUAUCUGAC----ACUCGAGGaa | |||||| |||||| tgggAGAGACTGCAACCCAGCTCCaa Klhl38 mmu-miR-29a 53 78 UUGGCUAAAG---UC--UACCACGAu |||| | || || |||| ||| AACCCAGCTCCAAAGGCATGGAGCTg Klhl38 mmu-miR-30a-3p 59 82 CGACGUUU--GUAGGCUGACUUUC ||| |||| ||| :||||:|| GCTCCAAAGGCATGGAGCTGAGAG Klhl38 mmu-miR-320 41 64 aagcgggaGA-GUUGGGUCGAaaa || |||||||||| gggagagaCTGCAACCCAGCTcca Klhl38 mmu-miR-326 35 62 ugACCUCCUUCCC-------GGGUCucc ||| ||:|| | ||||| tgTGGTGGGAGAGACTGCAACCCAGctc Klhl38 mmu-miR-337 64 80 UUUCCGUAGUAUAUCCUCGACUu |||||||| |||||||| AAAGGCAT------GGAGCTGAg Klhl38 mmu-miR-339 56 74 acUCGAGGACCUCCUGUCCCU |||||| | |:|| ||| ccAGCTCC--AAAGGCATGGA Klhl38 mmu-miR-340 30 52 CCGAUAUUUCAUUGACUCUGCCu ||||:|: :||:: ||||| | GGCTGTGTGGTGGGAGAGACTGc Klhl38 mmu-miR-342 27 46 cUGCCCACGCUAAAGACACACUCU | || ||:| : ||| |||| aAAGGCTGTG----TGGTGGGAGA Klhl38 mmu-miR-450b 35 56 auaaguCCUUGUAUGACGUUuu ||:| | ||||||| tgtggtGGGAGAGACTGCAAcc Klhl38 mmu-miR-455-3p 31 54 ucACAUAUACGGGCAC-CUGACGUa |||:|: |: | | ||||||| gcTGTGTG-GTGGGAGAGACTGCAa Klhl38 mmu-miR-483 26 48 UGUUCUGCCCUCCCCUCCUCACU | |||:| | : || :|||| || AAAAGGCTGTGTGGTGGGAGAGA Klhl38 mmu-miR-484 33 52 uagCCCUCCCCUGACUCGGACu | |: |||| ||| ||| tgtGTGGTGGGA--GAGACTGc Klhl38 mmu-miR-501 50 71 aaagUGGGUCCCUGUUUCCuaa |||||| |||||| tgcaACCCAGCTCCAAAGGcat Klhl38 mmu-miR-532 51 72 ugccaGGAUGUGAGUUCCGUAC || :| | |||||||| gcaacCCAGCTCCAAAGGCATG Klhl38 mmu-miR-542-3p 4 27 aaaGUC----AAUAGUUAGACAGugu ||| ||||| |||||| ccgCAGGAACTTATC--TCTGTCcaa Klhl38 mmu-miR-615 51 74 uucucccUCUGGG--UCCGAGCCU || :|| |||| :||| gcaacccAGCTCCAAAGGCATGGA Klhl38 mmu-miR-668 30 50 CCAUCACCCGGCUCGGCUCACUGu || ||| | :| | ||| ||| GGCTGTGTGGTG-G--GAGAGACt Klhl38 mmu-miR-673 60 82 GAGGUUCCUG-GUCUCGACACUC |||||| |:| ::|||||| ||| CTCCAAAGGCATGGAGCTGAGAG Klhl38 mmu-miR-677 173 198 AGUCUUCGAU----UAGUAGUGACUU |||||| ||: ||:|| ||||:| TCAGAAACTGCACTATTATAACTGGA Klhl38 mmu-miR-678 59 82 gGAGG--UCAGGAACGUGGCUCUg |||| || | | | :|:|||| gCTCCAAAGGCATGGAGCTGAGAg Klhl38 mmu-miR-682 28 54 gUCUGAAGUGACA------CUGACGUc ||:|| ::: || ||||||| aAGGCTGTGTGGTGGGAGAGACTGCAa Klhl38 mmu-miR-693-3p 4 35 aauGUCGGUG--U--AGAC-----UUUCGACg ||| || | |||| ||:|||| ccgCAGGAACTTATCTCTGTCCAAAAGGCTGt Klhl38 mmu-miR-702 29 45 cuCGCCCCAUUUCCCACCCgu || | || |||||| agGCTGTGT----GGTGGGag Klhl38 mmu-miR-710 13 37 GAGUUGAGAGGGG--UUCUGA-ACc ||:| |||| :|| |||:|| || CTTATCTCTGTCCAAAAGGCTGTGt Klhl38 mmu-miR-715 55 75 gugcgcccccacaCGUGCCUC |||:|||| cccagctccaaagGCATGGAG Klhl38 mmu-miR-718 22 45 gcuGUGGGCCGGC---CCGCCUUC || |||:| ||:||:|| gtcCAAAAGGCTGTGTGGTGGGAG Klhl38 mmu-miR-762 40 63 cgagacaggGCCG--GGGUCGGGG | || ||||||:|| tgggagagaCTGCAACCCAGCTCC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl38 RAID00229087 mmu-miR-130b-3p miRNA MIMAT0000387 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID00486901 mmu-miR-5114 miRNA MIMAT0020622 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID00601372 mmu-miR-362-3p miRNA MIMAT0004684 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID00672081 mmu-miR-301a-3p miRNA MIMAT0000379 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID00850565 mmu-miR-223-3p miRNA MIMAT0000665 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID00933857 mmu-miR-6407 miRNA MIMAT0025160 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID00994077 mmu-miR-26b-5p miRNA MIMAT0000534 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01059619 mmu-miR-5625-3p miRNA MIMAT0022380 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01073735 mmu-miR-185-5p miRNA MIMAT0000214 Klhl38 mRNA 268807 Prediction 0.2202 Klhl38 RAID01218725 mmu-miR-130a-3p miRNA MIMAT0000141 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01334619 mmu-miR-101a-5p miRNA MIMAT0004526 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01351191 mmu-miR-882 miRNA MIMAT0004847 Klhl38 mRNA 268807 Prediction 0.2202 Klhl38 RAID01491157 mmu-miR-721 miRNA MIMAT0003515 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01565829 mmu-miR-935 miRNA MIMAT0035718 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01567589 mmu-miR-653-3p miRNA MIMAT0017284 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01640699 mmu-miR-3071-5p miRNA MIMAT0014850 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01772748 mmu-miR-7243-5p miRNA MIMAT0029910 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID01883573 mmu-miR-143-3p miRNA MIMAT0000247 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02012926 mmu-miR-26a-5p miRNA MIMAT0000533 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02212387 mmu-miR-301b-3p miRNA MIMAT0004186 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02235812 mmu-miR-129-2-3p miRNA MIMAT0000544 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02474060 mmu-miR-7094b-2-5p miRNA MIMAT0028096 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02733884 mmu-miR-544-3p miRNA MIMAT0004941 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02785993 mmu-miR-7006-3p miRNA MIMAT0027917 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID02858095 mmu-miR-374b-5p miRNA MIMAT0003727 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID03000944 mmu-miR-7240-5p miRNA MIMAT0028448 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID03447521 mmu-miR-7242-5p miRNA MIMAT0028452 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID03494730 mmu-miR-1966-3p miRNA MIMAT0022952 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID03511557 mmu-miR-6374 miRNA MIMAT0025118 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID03605984 mmu-miR-145b miRNA MIMAT0025105 Klhl38 mRNA 268807 Prediction 0.1828 Klhl38 RAID03990999 mmu-miR-145a-5p miRNA MIMAT0000157 Klhl38 mRNA 268807 Prediction 0.2202 Klhl38 RAID04005855 mmu-miR-3473a miRNA MIMAT0015645 Klhl38 mRNA 268807 Prediction 0.1828