DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 66053 Ppil2 auUUGGUGGUAUACUUUGGUcg ||| | | || |||||| acAACAAGGAAAU-AAACCAca 3 21 553 573 [mm9:16:17086661-17086681:-] 0.5361 134 0 -9.45 -0.1870 MIMAT0004523 mmu-miR-29b* 66053 Ppil2 auUUGGUGGUAUACUUUGGUcg ||| | | || |||||| acAACAAGGAAAU-AAACCAca 3 21 651 671 [mm9:16:17086661-17086681:-] 0.5361 134 0 -9.45 -0.2893 MIMAT0004525 mmu-miR-99b* 66053 Ppil2 gcCUGGGUGUCUGUGCUCGAAc | :|::: :| ||||||| gcGCUCUGUUUGCUCGAGCUUg 2 21 180 201 [mm9:16:17087033-17087054:-] 0.5160 148 7 -21.35 -0.1207 MIMAT0004525 mmu-miR-99b* 66053 Ppil2 gcCUGGGUGUCUGUGCUCGAAc | :|::: :| ||||||| gcGCUCUGUUUGCUCGAGCUUg 2 21 278 299 [mm9:16:17087033-17087054:-] 0.5160 148 7 -21.35 -0.1132 MIMAT0000143 mmu-miR-9* 66053 Ppil2 ugaaagccaauagaUCGAAAUa ||||||| ugugugacgacaggAGCUUUAu 2 9 93 114 [mm9:16:17087120-17087141:-] 0.5160 140 7 -9.91 -0.3971 MIMAT0000143 mmu-miR-9* 66053 Ppil2 ugaaagccaauagaUCGAAAUa ||||||| ugugugacgacaggAGCUUUAu 2 9 191 212 [mm9:16:17087120-17087141:-] 0.5160 140 7 -9.91 -0.3775 MIMAT0004547 mmu-miR-203* 66053 Ppil2 acaacuugacaguucUUGGUGa |||||| gacaacaaggaaauaAACCACa 2 8 552 573 [mm9:16:17086661-17086682:-] 0.5361 120 6 -10.58 -0.2331 MIMAT0004547 mmu-miR-203* 66053 Ppil2 acaacuugacaguucUUGGUGa |||||| gacaacaaggaaauaAACCACa 2 8 650 671 [mm9:16:17086661-17086682:-] 0.5361 120 6 -10.58 -0.3529 MIMAT0004574 mmu-miR-294* 66053 Ppil2 ucuaucccggagguAAAACUCa ||||||| agaaaauaaaggacUUUUGAGg 2 9 435 456 [mm9:16:17086778-17086799:-] 0.5769 140 7 -9.02 -0.5142 MIMAT0004574 mmu-miR-294* 66053 Ppil2 ucuaucccggagguAAAACUCa ||||||| agaaaauaaaggacUUUUGAGg 2 9 533 554 [mm9:16:17086778-17086799:-] 0.5769 140 7 -9.02 -0.4942 MIMAT0000377 mmu-miR-299* 66053 Ppil2 uacauacacccugccAUUUGGu |||||| aagacaacaaggaaaUAAACCa 2 8 550 571 [mm9:16:17086663-17086684:-] 0.5361 120 6 -11.61 -0.1787 MIMAT0004578 mmu-miR-300* 66053 Ppil2 uguuuccuauuggAGAGAAGUu |||||||| aucucauuucugaUCUCUUCAa 2 10 466 487 [mm9:16:17086747-17086768:-] 0.5769 145 7 -13.23 -1.2272 MIMAT0004578 mmu-miR-300* 66053 Ppil2 uguuuccuauuggAGAGAAGUu |||||||| aucucauuucugaUCUCUUCAa 2 10 564 585 [mm9:16:17086747-17086768:-] 0.5769 145 7 -13.23 -1.2190 MIMAT0000378 mmu-miR-300 66053 Ppil2 cuUCUCUCGAACGGGAACGUAu ||| | | ||||||| acAGACCACCAGGGCUUGCAUu 2 21 326 347 [mm9:16:17086887-17086908:-] 0.4830 144 7 -13.28 -0.1430 MIMAT0000378 mmu-miR-300 66053 Ppil2 cuUCUCUCGAACGGGAACGUAu ||| | | ||||||| acAGACCACCAGGGCUUGCAUu 2 21 424 445 [mm9:16:17086887-17086908:-] 0.4830 144 7 -13.28 -0.1352 MIMAT0000378 mmu-miR-300 66053 Ppil2 cuucuCUCGA---ACGGGAAC-GUAu ||||| |||||||| ||| ucccuGAGCUUUCUGCCCUUGCCAUc 2 18 59 84 [mm9:16:17088779-17088804:-] 0.4769 132 0 -21.80 -0.2166 MIMAT0004620 mmu-let-7a* 66053 Ppil2 ccuuucugucaucuaACAUAUc |||||| gguauaaaaauacuaUGUAUAc 2 8 522 543 [mm9:16:17086691-17086712:-] 0.5361 120 6 -4.65 -0.1073 MIMAT0004620 mmu-let-7a* 66053 Ppil2 ccuuucugucaucuaACAUAUc |||||| gguauaaaaauacuaUGUAUAc 2 8 620 641 [mm9:16:17086691-17086712:-] 0.5361 120 6 -4.65 -0.1003 MIMAT0004621 mmu-let-7b* 66053 Ppil2 cccuuccgucauccaACAUAUc |||||| gguauaaaaauacuaUGUAUAc 2 8 522 543 [mm9:16:17086691-17086712:-] 0.5361 120 6 -4.65 -0.1094 MIMAT0004621 mmu-let-7b* 66053 Ppil2 cccuuccgucauccaACAUAUc |||||| gguauaaaaauacuaUGUAUAc 2 8 620 641 [mm9:16:17086691-17086712:-] 0.5361 120 6 -4.65 -0.1024 MIMAT0005439 mmu-let-7c-2* 66053 Ppil2 ccuuucugucaucuaACAUAUc |||||| gguauaaaaauacuaUGUAUAc 2 8 522 543 [mm9:16:17086691-17086712:-] 0.5361 120 6 -4.65 -0.1073 MIMAT0005439 mmu-let-7c-2* 66053 Ppil2 ccuuucugucaucuaACAUAUc |||||| gguauaaaaauacuaUGUAUAc 2 8 620 641 [mm9:16:17086691-17086712:-] 0.5361 120 6 -4.65 -0.1003 MIMAT0004623 mmu-let-7f* 66053 Ppil2 cccuuccgUUAUCUAACAUAUc |||| |||||| gguauaaaAAUACUAUGUAUAc 2 15 522 543 [mm9:16:17086691-17086712:-] 0.5361 122 6 -5.39 -0.1073 MIMAT0004623 mmu-let-7f* 66053 Ppil2 cccuuccgUUAUCUAACAUAUc |||| |||||| gguauaaaAAUACUAUGUAUAc 2 15 620 641 [mm9:16:17086691-17086712:-] 0.5361 122 6 -5.39 -0.1003 MIMAT0004635 mmu-miR-92a* 66053 Ppil2 caUUACGGUGGUUAGGGGUGGa | | |:: | ||||||||| ggACUCCUGGC-AUCCCCACCc 2 21 145 165 [mm9:16:17088698-17088718:-] 0.4913 154 7 -21.69 -0.2041 MIMAT0004638 mmu-miR-323-5p 66053 Ppil2 cgcuugcgcggUGCCUGGUGGa || ||||||| cagcacagaggACAGACCACCa 2 12 315 336 [mm9:16:17086898-17086919:-] 0.4830 147 7 -17.21 -0.2273 MIMAT0004638 mmu-miR-323-5p 66053 Ppil2 cgcuugcgcggUGCCUGGUGGa || ||||||| cagcacagaggACAGACCACCa 2 12 413 434 [mm9:16:17086898-17086919:-] 0.4830 147 7 -17.21 -0.2156 MIMAT0004649 mmu-miR-339-3p 66053 Ppil2 gccgagacagCGGCUCCGCGAGu ||| |||||||| agacagggagGCCAAGGCGCUCu 2 14 164 186 [mm9:16:17087048-17087070:-] 0.5160 157 7 -22.62 -0.1077 MIMAT0004649 mmu-miR-339-3p 66053 Ppil2 gccgagacagCGGCUCCGCGAGu ||| |||||||| agacagggagGCCAAGGCGCUCu 2 14 262 284 [mm9:16:17087048-17087070:-] 0.5160 157 7 -22.62 -0.1009 MIMAT0000706 mmu-miR-362-5p 66053 Ppil2 uaagUGUGGAUCCAAGGUUCCUaa ::| | || |||||| uacaGUAACAAGACAACAAGGAaa 3 21 541 564 [mm9:16:17086670-17086693:-] 0.5361 124 0 -10.45 -0.2098 MIMAT0000706 mmu-miR-362-5p 66053 Ppil2 uaagUGUGGAUCCAAGGUUCCUaa ::| | || |||||| uacaGUAACAAGACAACAAGGAaa 3 21 639 662 [mm9:16:17086670-17086693:-] 0.5361 124 0 -10.45 -0.1796 MIMAT0004217 mmu-miR-465a-3p 66053 Ppil2 agaugaaucuUUCCGGGACUAg :|| ||||||| agcgggcucuGAGACCCUGAUc 2 13 90 111 [mm9:16:17087221-17087242:-] 0.5041 148 7 -19.56 -0.1474 MIMAT0002107 mmu-miR-466a-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 520 542 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1447 MIMAT0002107 mmu-miR-466a-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 618 640 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1316 MIMAT0002108 mmu-miR-467a-1* 66053 Ppil2 cacauccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 522 543 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0261 MIMAT0002108 mmu-miR-467a-1* 66053 Ppil2 cacauccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 620 641 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0073 MIMAT0004790 mmu-miR-503* 66053 Ppil2 ggUCCGUCA--CC-U-UUGUUAUGAg | ||| | || | || |||||| auAAGCAUUAAGGUAUAAAAAUACUa 2 21 511 536 [mm9:16:17086698-17086723:-] 0.5361 121 6 -8.66 -0.2298 MIMAT0004790 mmu-miR-503* 66053 Ppil2 ggUCCGUCA--CC-U-UUGUUAUGAg | ||| | || | || |||||| auAAGCAUUAAGGUAUAAAAAUACUa 2 21 609 634 [mm9:16:17086698-17086723:-] 0.5361 121 6 -8.66 -0.2202 MIMAT0003731 mmu-miR-671-5p 66053 Ppil2 gaggucggGGAGGUCCCGA-AGGa |:||::||||| ||| gcugugggCUUCUGGGGCUGUCCc 2 16 39 62 [mm9:16:17088801-17088824:-] 0.4833 127 0 -24.90 -0.1537 MIMAT0004822 mmu-miR-770-5p 66053 Ppil2 gcACCGG-GUCU---GUGCACC-ACGa ||||| |||: | :|||| ||| gcUGGCCUCAGGGAUCCUGUGGAUGCu 2 21 7 33 [mm9:16:17087201-17087208,17088838-17088856:-] 0.5409 122 0 -27.88 -0.1340 MIMAT0015219 mmu-miR-3475 66053 Ppil2 aaguuuGGUACACGGAGGUCu :| ||| ||||||| guccucUCCUGU-CCUCCAGc 2 16 299 318 [mm9:16:17086916-17086935:-] 0.4830 149 7 -19.26 -0.3201 MIMAT0015219 mmu-miR-3475 66053 Ppil2 aaguuuGGUACACGGAGGUCu :| ||| ||||||| guccucUCCUGU-CCUCCAGc 2 16 397 416 [mm9:16:17086916-17086935:-] 0.4830 149 7 -19.26 -0.3050 MIMAT0003736 mmu-miR-670 66053 Ppil2 aaGUGGUGU-AUGUGAGUCCCUa || || : |: |||||||| --CAGCAGGCUGGCCUCAGGGAu 2 21 1 21 [mm9:16:17088842-17088862:-] 0.5593 151 7 -20.30 -0.5735 MIMAT0003736 mmu-miR-670 66053 Ppil2 aaGUGGUGU-AUGUGAGUCCCUa || || : |: |||||||| --CAGCAGGCUGGCCUCAGGGAu 2 21 1 21 [mm9:16:17088842-17088862:-] 0.5593 151 7 -20.30 -0.1025 MIMAT0004824 mmu-miR-673-3p 66053 Ppil2 ccaCGU-GUCUUGAG----UCGGG-GCCu ||| |||:|| | ||||| ||| gaaGCAUCAGGACCCCAGAAGCCCUCGGu 2 21 57 85 [mm9:16:17087247-17087275:-] 0.5041 122 0 -27.26 -0.1263 MIMAT0003457 mmu-miR-680 66053 Ppil2 gggggUACAGUC-GUCUACGGg || | | |||||||| uucaaAUACCUGACAGAUGCCa 2 17 483 504 [mm9:16:17086730-17086751:-] 0.5769 147 7 -17.53 -0.9777 MIMAT0003457 mmu-miR-680 66053 Ppil2 gggggUACAGUC-GUCUACGGg || | | |||||||| uucaaAUACCUGACAGAUGCCa 2 17 581 602 [mm9:16:17086730-17086751:-] 0.5769 147 7 -17.53 -0.9605 MIMAT0003478 mmu-miR-467b* 66053 Ppil2 cacaaccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 522 543 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0261 MIMAT0003478 mmu-miR-467b* 66053 Ppil2 cacaaccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 620 641 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0073 MIMAT0003479 mmu-miR-669c 66053 Ppil2 uguGUGUAGGUGUGUGUU-GAUa | :: |||| ||||| ||| gauCCUGGCCACUCACAAGCUAc 2 20 19 41 [mm9:16:17087291-17087306,17088838-17088844:-] 0.4957 127 0 -15.33 -0.2002 MIMAT0004827 mmu-miR-297b-3p 66053 Ppil2 auacccauacacacAUACAUAu ||||||| agguauaaaaauacUAUGUAUa 2 9 521 542 [mm9:16:17086692-17086713:-] 0.5361 140 7 -11.16 -1.1406 MIMAT0004827 mmu-miR-297b-3p 66053 Ppil2 auacccauacacacAUACAUAu ||||||| agguauaaaaauacUAUGUAUa 2 9 619 640 [mm9:16:17086692-17086713:-] 0.5361 140 7 -11.16 -1.1274 MIMAT0003495 mmu-miR-705 66053 Ppil2 acgggugggGUGGAGGGUGg :||||||||| uuuauuuuaUACCUCCCACa 2 12 110 129 [mm9:16:17087105-17087124:-] 0.5160 151 7 -22.49 -0.8327 MIMAT0003495 mmu-miR-705 66053 Ppil2 acgggugggGUGGAGGGUGg :||||||||| uuuauuuuaUACCUCCCACa 2 12 208 227 [mm9:16:17087105-17087124:-] 0.5160 151 7 -22.49 -0.8095 MIMAT0003499 mmu-miR-709 66053 Ppil2 aggaggacggaGACGGAgg |||||| gauuuugaaaaCUGCCUga 3 9 406 424 [mm9:16:17086810-17086828:-] 0.5769 120 0 -12.59 -0.1234 MIMAT0003499 mmu-miR-709 66053 Ppil2 aggaggacggaGACGGAgg |||||| gauuuugaaaaCUGCCUga 3 9 504 522 [mm9:16:17086810-17086828:-] 0.5769 120 0 -12.59 -0.1165 MIMAT0004837 mmu-miR-615-5p 66053 Ppil2 cuAGGC-UCGUGGCCCCUGGGGg || | ||||:| ||||||| ugUCAGAAGCAUC-AGGACCCCa 2 21 52 73 [mm9:16:17087259-17087280:-] 0.5041 157 7 -26.64 -0.5164 MIMAT0004864 mmu-miR-297a* 66053 Ppil2 auacccauacacacAUACAUAu ||||||| agguauaaaaauacUAUGUAUa 2 9 521 542 [mm9:16:17086692-17086713:-] 0.5361 140 7 -11.16 -1.1406 MIMAT0004864 mmu-miR-297a* 66053 Ppil2 auacccauacacacAUACAUAu ||||||| agguauaaaaauacUAUGUAUa 2 9 619 640 [mm9:16:17086692-17086713:-] 0.5361 140 7 -11.16 -1.1274 MIMAT0004866 mmu-miR-297c* 66053 Ppil2 auacccauacacacAUACAUAu ||||||| agguauaaaaauacUAUGUAUa 2 9 521 542 [mm9:16:17086692-17086713:-] 0.5361 140 7 -11.16 -1.1406 MIMAT0004866 mmu-miR-297c* 66053 Ppil2 auacccauacacacAUACAUAu ||||||| agguauaaaaauacUAUGUAUa 2 9 619 640 [mm9:16:17086692-17086713:-] 0.5361 140 7 -11.16 -1.1274 MIMAT0004868 mmu-miR-343 66053 Ppil2 agACCCGUGUACU-UCCCUCu ||| :| : || |||||| uuUGGCUAGGAGACAGGGAGg 2 19 154 174 [mm9:16:17087060-17087080:-] 0.5160 122 6 -18.65 -0.1299 MIMAT0004868 mmu-miR-343 66053 Ppil2 agACCCGUGUACU-UCCCUCu ||| :| : || |||||| uuUGGCUAGGAGACAGGGAGg 2 19 252 272 [mm9:16:17087060-17087080:-] 0.5160 122 6 -18.65 -0.1219 MIMAT0004872 mmu-miR-465b-3p 66053 Ppil2 agaugaaucuUUCCGGGACUAg :|| ||||||| agcgggcucuGAGACCCUGAUc 2 13 90 111 [mm9:16:17087221-17087242:-] 0.5041 148 7 -19.56 -0.1474 MIMAT0004874 mmu-miR-465c-3p 66053 Ppil2 agaugaaucuUUCCGGGACUAg :|| ||||||| agcgggcucuGAGACCCUGAUc 2 13 90 111 [mm9:16:17087221-17087242:-] 0.5041 148 7 -19.56 -0.1474 MIMAT0004876 mmu-miR-466b-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 520 542 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1447 MIMAT0004876 mmu-miR-466b-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 618 640 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1316 MIMAT0005453 mmu-miR-466b-3-3p 66053 Ppil2 agaauacacacgcacAUACAUAa ||||||| aagguauaaaaauacUAUGUAUa 2 9 520 542 [mm9:16:17086692-17086714:-] 0.5361 140 7 -5.33 -1.1447 MIMAT0005453 mmu-miR-466b-3-3p 66053 Ppil2 agaauacacacgcacAUACAUAa ||||||| aagguauaaaaauacUAUGUAUa 2 9 618 640 [mm9:16:17086692-17086714:-] 0.5361 140 7 -5.33 -1.1316 MIMAT0004878 mmu-miR-466c-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 520 542 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1447 MIMAT0004878 mmu-miR-466c-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 618 640 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1316 MIMAT0004880 mmu-miR-466e-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 520 542 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1447 MIMAT0004880 mmu-miR-466e-3p 66053 Ppil2 agaauacacacgcacAUACAUAu ||||||| aagguauaaaaauacUAUGUAUa 2 9 618 640 [mm9:16:17086692-17086714:-] 0.5361 140 7 -7.59 -1.1316 MIMAT0004887 mmu-miR-467d* 66053 Ppil2 cacauccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 522 543 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0261 MIMAT0004887 mmu-miR-467d* 66053 Ppil2 cacauccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 620 641 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0073 MIMAT0004892 mmu-miR-568 66053 Ppil2 cacacaUAUG-UAAAUAUGUa |||| || |||||| auaaaaAUACUAUGUAUACAg 2 15 525 545 [mm9:16:17086689-17086709:-] 0.5361 129 6 -7.78 -0.1632 MIMAT0004892 mmu-miR-568 66053 Ppil2 cacacaUAUG-UAAAUAUGUa |||| || |||||| auaaaaAUACUAUGUAUACAg 2 15 623 643 [mm9:16:17086689-17086709:-] 0.5361 129 6 -7.78 -0.1507 MIMAT0004931 mmu-miR-466d-3p 66053 Ppil2 gauacacacgcacAUACAUAu ||||||| gguauaaaaauacUAUGUAUa 2 9 522 542 [mm9:16:17086692-17086712:-] 0.5361 140 7 -7.59 -1.1447 MIMAT0004931 mmu-miR-466d-3p 66053 Ppil2 gauacacacgcacAUACAUAu ||||||| gguauaaaaauacUAUGUAUa 2 9 620 640 [mm9:16:17086692-17086712:-] 0.5361 140 7 -7.59 -1.1316 MIMAT0004862 mmu-miR-877* 66053 Ppil2 acccuccucccucuUCUCCUGu ||||||| cuguccuccagcacAGAGGACa 2 9 307 328 [mm9:16:17086906-17086927:-] 0.4830 140 7 -14.07 -0.2066 MIMAT0004862 mmu-miR-877* 66053 Ppil2 acccuccucccucuUCUCCUGu ||||||| cuguccuccagcacAGAGGACa 2 9 405 426 [mm9:16:17086906-17086927:-] 0.4830 140 7 -14.07 -0.1959 MIMAT0005294 mmu-miR-467e* 66053 Ppil2 uauauccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 522 543 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0261 MIMAT0005294 mmu-miR-467e* 66053 Ppil2 uauauccacacacAUACAUAUa |||||||| gguauaaaaauacUAUGUAUAc 2 10 620 641 [mm9:16:17086691-17086712:-] 0.5361 145 7 -6.65 -1.0073 MIMAT0005839 mmu-miR-669f 66053 Ppil2 uaugcacacacacAUACAUAUac |||||||| gguauaaaaauacUAUGUAUAca 3 11 522 544 [mm9:16:17086690-17086712:-] 0.5361 130 0 -6.45 -0.1591 MIMAT0005839 mmu-miR-669f 66053 Ppil2 uaugcacacacacAUACAUAUac |||||||| gguauaaaaauacUAUGUAUAca 3 11 620 642 [mm9:16:17086690-17086712:-] 0.5361 130 0 -6.45 -0.1488 MIMAT0005846 mmu-miR-467f 66053 Ppil2 acauccacacacacACAUAUa |||||| guauaaaaauacuaUGUAUAc 2 8 523 543 [mm9:16:17086691-17086711:-] 0.5361 120 6 -3.45 -0.1105 MIMAT0005846 mmu-miR-467f 66053 Ppil2 acauccacacacacACAUAUa |||||| guauaaaaauacuaUGUAUAc 2 8 621 641 [mm9:16:17086691-17086711:-] 0.5361 120 6 -3.45 -0.1034 MIMAT0005853 mmu-miR-669e 66053 Ppil2 uacUUGUACGUGUG----UGUUCUGu | :|||:|:|| ||||||| aauACUAUGUAUACAGUAACAAGACa 2 20 530 555 [mm9:16:17086679-17086704:-] 0.5361 154 7 -19.71 -1.2599 MIMAT0005853 mmu-miR-669e 66053 Ppil2 uacUUGUACGUGUG----UGUUCUGu | :|||:|:|| ||||||| aauACUAUGUAUACAGUAACAAGACa 2 20 628 653 [mm9:16:17086679-17086704:-] 0.5361 154 7 -19.71 -1.2524 MIMAT0005854 mmu-miR-467g 66053 Ppil2 uauauacacacacAUACAUAu ||||||| gguauaaaaauacUAUGUAUa 2 9 522 542 [mm9:16:17086692-17086712:-] 0.5361 140 7 -7.59 -1.1427 MIMAT0005854 mmu-miR-467g 66053 Ppil2 uauauacacacacAUACAUAu ||||||| gguauaaaaauacUAUGUAUa 2 9 620 640 [mm9:16:17086692-17086712:-] 0.5361 140 7 -7.59 -1.1295 MIMAT0005858 mmu-miR-1197 66053 Ppil2 ucUUCAUCUGGU-ACACAGGAu ::| ||:| : |||||||| caGGGCAGGCAGCUGUGUCCUc 2 20 283 304 [mm9:16:17086930-17086951:-] 0.4830 154 7 -18.97 -0.1035 MIMAT0007878 mmu-miR-1894-3p 66053 Ppil2 gaGGGAAGUGGGAGA-GGGAACg |||| :|::||| |||||| guCCCUGAGCUUUCUGCCCUUGc 2 21 58 80 [mm9:16:17088783-17088805:-] 0.4769 136 6 -32.96 -0.1459 MIMAT0009397 mmu-miR-1933-3p 66053 Ppil2 uaucAGUGUG-ACUACCAGGACc ||: :| || |||||||| uugcUCGAGCUUGCUGGUCCUGc 2 19 189 211 [mm9:16:17087023-17087045:-] 0.4995 157 7 -19.21 -0.1722 MIMAT0009397 mmu-miR-1933-3p 66053 Ppil2 uaucAGUGUG-ACUACCAGGACc ||: :| || |||||||| uugcUCGAGCUUGCUGGUCCUGc 2 19 287 309 [mm9:16:17087023-17087045:-] 0.4995 157 7 -19.21 -0.1618 MIMAT0009415 mmu-miR-1948 66053 Ppil2 gacaugcucacGA-GACGGAUUu || :||||||| agccaauaaacCUGUUGCCUAAg 2 12 98 120 [mm9:16:17088743-17088765:-] 0.4914 142 7 -12.11 -0.2216 MIMAT0009416 mmu-miR-1949 66053 Ppil2 uugauacgacUGUAGGACCAUAUc :|||: |||||| ucaagaauaaGCAUUAAGGUAUAa 2 15 505 528 [mm9:16:17086706-17086729:-] 0.5565 122 6 -9.53 -0.1923 MIMAT0009416 mmu-miR-1949 66053 Ppil2 uugauacgacUGUAGGACCAUAUc :|||: |||||| ucaagaauaaGCAUUAAGGUAUAa 2 15 603 626 [mm9:16:17086706-17086729:-] 0.5565 122 6 -9.53 -0.1796 MIMAT0009419 mmu-miR-669m 66053 Ppil2 uauacaaacacaccUACAUAUa ||||||| gguauaaaaauacuAUGUAUAc 2 9 522 543 [mm9:16:17086691-17086712:-] 0.5361 140 7 -5.76 -1.0261 MIMAT0009419 mmu-miR-669m 66053 Ppil2 uauacaaacacaccUACAUAUa ||||||| gguauaaaaauacuAUGUAUAc 2 9 620 641 [mm9:16:17086691-17086712:-] 0.5361 140 7 -5.76 -1.0073 MIMAT0009445 mmu-miR-1274a 66053 Ppil2 acCG-CGGACU--UGUCCCU-GGACu || | |||: |||||| |||| caGCAGGCUGGCCUCAGGGAUCCUGu 2 21 1 26 [mm9:16:17087208-17087208,17088838-17088862:-] 0.5409 122 0 -27.68 -0.1348 MIMAT0009445 mmu-miR-1274a 66053 Ppil2 acCG-CGGACU--UGUCCCU-GGACu || | |||: |||||| |||| caGCAGGCUGGCCUCAGGGAUCCUGg 2 21 1 26 [mm9:16:17087306-17087306,17088838-17088862:-] 0.5401 122 0 -28.85 -0.1275 MIMAT0009459 mmu-miR-1982* 66053 Ppil2 ggagggguccugGGAGGGUu ||||||| cuuuauuuuauaCCUCCCAc 2 9 109 128 [mm9:16:17087106-17087125:-] 0.5160 140 7 -16.05 -0.7895 MIMAT0009459 mmu-miR-1982* 66053 Ppil2 ggagggguccugGGAGGGUu ||||||| cuuuauuuuauaCCUCCCAc 2 9 207 226 [mm9:16:17087106-17087125:-] 0.5160 140 7 -16.05 -0.7659 MIMAT0000135 mmu-miR-125a-5p 66053 Ppil2 agUGUCCAAUUUCCCAGAGUCCCu :|||| | || ||||||| caGCAGGCU----GGCCUCAGGGa 2 23 1 20 [mm9:16:17088843-17088862:-] 0.5593 149 7 -24.26 -0.9946 MIMAT0000135 mmu-miR-125a-5p 66053 Ppil2 agUGUCCAAUUUCCCAGAGUCCCu :|||| | || ||||||| caGCAGGCU----GGCCUCAGGGa 2 23 1 20 [mm9:16:17088843-17088862:-] 0.5593 149 7 -24.26 -0.3230 MIMAT0000135 mmu-miR-125a-5p 66053 Ppil2 agUGUCCAAUUUCCCAGAGUCCCu :|||| | || ||||||| caGCAGGCU----GGCCUCAGGGa 2 23 1 20 [mm9:16:17088843-17088862:-] 0.5593 149 7 -24.26 -0.1538 MIMAT0000136 mmu-miR-125b-5p 66053 Ppil2 agUGUUCAAUCCCAGAGUCCCu :||:| | || ||||||| caGCAGGCU--GGCCUCAGGGa 2 21 1 20 [mm9:16:17088843-17088862:-] 0.5593 153 7 -22.57 -0.9887 MIMAT0000136 mmu-miR-125b-5p 66053 Ppil2 agUGUUCAAUCCCAGAGUCCCu :||:| | || ||||||| caGCAGGCU--GGCCUCAGGGa 2 21 1 20 [mm9:16:17088843-17088862:-] 0.5593 153 7 -22.57 -0.3176 MIMAT0000136 mmu-miR-125b-5p 66053 Ppil2 agUGUUCAAUCCCAGAGUCCCu :||:| | || ||||||| caGCAGGCU--GGCCUCAGGGa 2 21 1 20 [mm9:16:17088843-17088862:-] 0.5593 153 7 -22.57 -0.1509 MIMAT0000151 mmu-miR-140 66053 Ppil2 gaUGGUAUCCCAU--UUUGGUGac || | | || | ||||||| agACAACAAGGAAAUAAACCACau 3 21 551 574 [mm9:16:17086660-17086683:-] 0.5361 135 0 -12.87 -0.1638 MIMAT0000165 mmu-miR-155 66053 Ppil2 ugggGAUAG-UGUUAAUCGUAAUu | ||| | ||| ||||||| gaugCCAUCAAGAAUAAGCAUUAa 2 20 498 521 [mm9:16:17086713-17086736:-] 0.5565 162 7 -17.14 -1.2374 MIMAT0000165 mmu-miR-155 66053 Ppil2 ugggGAUAG-UGUUAAUCGUAAUu | ||| | ||| ||||||| gaugCCAUCAAGAAUAAGCAUUAa 2 20 596 619 [mm9:16:17086713-17086736:-] 0.5565 162 7 -17.14 -1.2273 MIMAT0000212 mmu-miR-183 66053 Ppil2 ucacUUA-AGAUGGUC-ACGGUAu ||| ||: ||| |||||| uucaAAUACCUGACAGAUGCCAUc 2 19 483 506 [mm9:16:17086728-17086751:-] 0.5769 125 6 -14.25 -0.8854 MIMAT0000212 mmu-miR-183 66053 Ppil2 ucacUUA-AGAUGGUC-ACGGUAu ||| ||: ||| |||||| uucaAAUACCUGACAGAUGCCAUc 2 19 581 604 [mm9:16:17086728-17086751:-] 0.5769 125 6 -14.25 -0.8647 MIMAT0000235 mmu-miR-202-3p 66053 Ppil2 agaagGGUACGCGAUAUGGAGa |: | : :|||||||| aggagCUUUAUUUUAUACCUCc 2 18 104 125 [mm9:16:17087109-17087130:-] 0.5160 149 7 -13.56 -0.4891 MIMAT0000235 mmu-miR-202-3p 66053 Ppil2 agaagGGUACGCGAUAUGGAGa |: | : :|||||||| aggagCUUUAUUUUAUACCUCc 2 18 202 223 [mm9:16:17087109-17087130:-] 0.5160 149 7 -13.56 -0.4671 MIMAT0000236 mmu-miR-203 66053 Ppil2 gaucaccaggauuUGUAAAGug ||||||| aaggaaauaaaccACAUUUCua 3 10 558 579 [mm9:16:17086655-17086676:-] 0.5361 125 0 -7.96 -0.1035 MIMAT0000366 mmu-miR-290-5p 66053 Ppil2 uuucACGGGGGUAUCAAACUCa || :|| |||||||| gaccUGGGUCC--AGUUUGAGc 2 19 120 139 [mm9:16:17088724-17088743:-] 0.5059 147 7 -14.96 -0.1091 MIMAT0000373 mmu-miR-295 66053 Ppil2 ucuGAGUUU-UCAUCAUC-GUGAAa :|:|:| |||| || ||||| uguUUUAGACAGUA-AAGACACUUg 2 21 382 405 [mm9:16:17086829-17086852:-] 0.5555 121 0 -9.95 -0.9306 MIMAT0000373 mmu-miR-295 66053 Ppil2 ucuGAGUUU-UCAUCAUC-GUGAAa :|:|:| |||| || ||||| uguUUUAGACAGUA-AAGACACUUg 2 21 480 503 [mm9:16:17086829-17086852:-] 0.5555 121 0 -9.95 -0.9117 MIMAT0004577 mmu-miR-299 66053 Ppil2 uucgccaaauggcagGGUGUAu |||||| caacaaggaaauaaaCCACAUu 2 8 554 575 [mm9:16:17086659-17086680:-] 0.5361 120 6 -14.71 -0.1166 MIMAT0000380 mmu-miR-302a 66053 Ppil2 agugguUUUGUACCUUC-GUGAAu |:||| ||| ||||| uguuuuAGACAGUAAAGACACUUg 2 18 382 405 [mm9:16:17086829-17086852:-] 0.5555 121 0 -12.46 -0.9306 MIMAT0000380 mmu-miR-302a 66053 Ppil2 agugguUUUGUACCUUC-GUGAAu |:||| ||| ||||| uguuuuAGACAGUAAAGACACUUg 2 18 480 503 [mm9:16:17086829-17086852:-] 0.5555 121 0 -12.46 -0.9117 MIMAT0000531 mmu-miR-22 66053 Ppil2 ugucaagaagUUGACCGUCGAa ::| ||||||| cuguccccagGGCAGGCAGCUg 2 13 276 297 [mm9:16:17086937-17086958:-] 0.4830 144 7 -17.10 -0.1030 MIMAT0000546 mmu-miR-103 66053 Ppil2 aguaucGGGACAUGUUACGACGa :|||||: :||||||| cagggaUCCUGUG-GAUGCUGCa 2 18 15 36 [mm9:16:17087198-17087208,17088838-17088848:-] 0.4969 159 7 -22.06 -0.4844 MIMAT0000546 mmu-miR-103 66053 Ppil2 aguAUCGGGA-CAUGUUACGACGa |: :||| ||: :||||||| cuuUGCUCCUAGUG-GAUGCUGCa 2 21 112 134 [mm9:16:17087198-17087220:-] 0.5041 153 7 -18.53 -0.1481 MIMAT0000584 mmu-miR-339-5p 66053 Ppil2 gcacUCGAG---GACCUCCUGUCCCu ||||: || |: ||||||| ugacAGCUUUGGCUAGGAGACAGGGa 2 20 147 172 [mm9:16:17087062-17087087:-] 0.5160 154 7 -25.15 -0.1642 MIMAT0000584 mmu-miR-339-5p 66053 Ppil2 gcacUCGAG---GACCUCCUGUCCCu ||||: || |: ||||||| ugacAGCUUUGGCUAGGAGACAGGGa 2 20 245 270 [mm9:16:17087062-17087087:-] 0.5160 154 7 -25.15 -0.1543 MIMAT0000609 mmu-miR-351 66053 Ppil2 guccgaGUUUCCCGA--GGAGUCCCu ||: |||| |||||||| ------CAGCAGGCUGGCCUCAGGGa 2 19 1 20 [mm9:16:17088843-17088862:-] 0.5593 157 7 -29.86 -0.9857 MIMAT0000609 mmu-miR-351 66053 Ppil2 guccgaGUUUCCCGA--GGAGUCCCu ||: |||| |||||||| ------CAGCAGGCUGGCCUCAGGGa 2 19 1 20 [mm9:16:17088843-17088862:-] 0.5593 157 7 -29.86 -0.3150 MIMAT0000609 mmu-miR-351 66053 Ppil2 guccgaGUUUCCCGA--GGAGUCCCu ||: |||| |||||||| ------CAGCAGGCUGGCCUCAGGGa 2 19 1 20 [mm9:16:17088843-17088862:-] 0.5593 157 7 -29.86 -0.1494 MIMAT0000647 mmu-miR-107 66053 Ppil2 acuaucGGGACAUGUUACGACGa :|||||: :||||||| cagggaUCCUGUG-GAUGCUGCa 2 18 15 36 [mm9:16:17087198-17087208,17088838-17088848:-] 0.4969 159 7 -23.36 -0.4844 MIMAT0000647 mmu-miR-107 66053 Ppil2 acuAUCGGGA-CAUGUUACGACGa |: :||| ||: :||||||| cuuUGCUCCUAGUG-GAUGCUGCa 2 21 112 134 [mm9:16:17087198-17087220:-] 0.5041 153 7 -18.53 -0.1481 MIMAT0000661 mmu-miR-214 66053 Ppil2 ugaCGGACAGACACGGACGACa ||:|| ||| ||||||| cgaGCUUG-CUGGUCCUGCUGu 2 20 194 214 [mm9:16:17087020-17087040:-] 0.4995 161 7 -25.99 -0.3873 MIMAT0000661 mmu-miR-214 66053 Ppil2 ugaCGGACAGACACGGACGACa ||:|| ||| ||||||| cgaGCUUG-CUGGUCCUGCUGu 2 20 292 312 [mm9:16:17087020-17087040:-] 0.4995 161 7 -25.99 -0.3680 MIMAT0000748 mmu-miR-383 66053 Ppil2 ucggUGUCAGUG-GAAGACUAGa | | || | :|||||||| aaaaAAAAUCUCAUUUCUGAUCu 2 19 459 481 [mm9:16:17086753-17086775:-] 0.5769 153 7 -15.10 -0.8502 MIMAT0000748 mmu-miR-383 66053 Ppil2 ucggUGUCAGUG-GAAGACUAGa | | || | :|||||||| aaaaAAAAUCUCAUUUCUGAUCu 2 19 557 579 [mm9:16:17086753-17086775:-] 0.5769 153 7 -15.10 -0.8299 MIMAT0001095 mmu-miR-370 66053 Ppil2 ugguccaaggugggGUCGUCCg ||||||| --------------CAGCAGGc 2 9 1 8 [mm9:16:17088855-17088862:-] 0.6289 140 7 -16.03 -0.2776 MIMAT0001095 mmu-miR-370 66053 Ppil2 ugguccaaggugggGUCGUCCg ||||||| --------------CAGCAGGc 2 9 1 8 [mm9:16:17088855-17088862:-] 0.6289 140 7 -16.03 -0.1243 MIMAT0001418 mmu-miR-431 66053 Ppil2 acguacugccggacGUUCUGu |||||| uauguauacaguaaCAAGACa 2 8 535 555 [mm9:16:17086679-17086699:-] 0.5361 120 6 -14.72 -0.2328 MIMAT0001418 mmu-miR-431 66053 Ppil2 acguacugccggacGUUCUGu |||||| uauguauacaguaaCAAGACa 2 8 633 653 [mm9:16:17086679-17086699:-] 0.5361 120 6 -14.72 -0.2161 MIMAT0003183 mmu-miR-376c 66053 Ppil2 ugcacuuuaaaggaGAUACAa |||||| aagguauaaaaauaCUAUGUa 2 8 520 540 [mm9:16:17086694-17086714:-] 0.5361 120 6 -6.25 -0.2074 MIMAT0003183 mmu-miR-376c 66053 Ppil2 ugcacuuuaaaggaGAUACAa |||||| aagguauaaaaauaCUAUGUa 2 8 618 638 [mm9:16:17086694-17086714:-] 0.5361 120 6 -6.25 -0.1963 MIMAT0003374 mmu-miR-302b 66053 Ppil2 gauGAUUUUGUACCUUC-GUGAAu :| |:||| ||| ||||| uguUUUAGACAGUAAAGACACUUg 2 21 382 405 [mm9:16:17086829-17086852:-] 0.5555 124 0 -12.54 -0.9306 MIMAT0003374 mmu-miR-302b 66053 Ppil2 gauGAUUUUGUACCUUC-GUGAAu :| |:||| ||| ||||| uguUUUAGACAGUAAAGACACUUg 2 21 480 503 [mm9:16:17086829-17086852:-] 0.5555 124 0 -12.54 -0.9117 MIMAT0003377 mmu-miR-302d 66053 Ppil2 uguGAGUUUGUACCUUC-GUGAAu :|:|:||| ||| ||||| uguUUUAGACAGUAAAGACACUUg 2 21 382 405 [mm9:16:17086829-17086852:-] 0.5555 128 0 -15.71 -0.9306 MIMAT0003377 mmu-miR-302d 66053 Ppil2 uguGAGUUUGUACCUUC-GUGAAu :|:|:||| ||| ||||| uguUUUAGACAGUAAAGACACUUg 2 21 480 503 [mm9:16:17086829-17086852:-] 0.5555 128 0 -15.71 -0.9117 MIMAT0003890 mmu-miR-551b 66053 Ppil2 gacuuugguucaUACCCAGCg |||||||| gcuugcauuuccAUGGGUCGg 2 10 339 359 [mm9:16:17086875-17086895:-] 0.4830 145 7 -16.01 -0.4080 MIMAT0003890 mmu-miR-551b 66053 Ppil2 gacuuugguucaUACCCAGCg |||||||| gcuugcauuuccAUGGGUCGg 2 10 437 457 [mm9:16:17086875-17086895:-] 0.4830 145 7 -16.01 -0.3902 MIMAT0003893 mmu-miR-761 66053 Ppil2 acacagucaaAGUGGGACGACg | ::||||||| ucgagcuugcUGGUCCUGCUGu 2 13 193 214 [mm9:16:17087020-17087041:-] 0.4995 144 7 -16.42 -0.3933 MIMAT0003893 mmu-miR-761 66053 Ppil2 acacagucaaAGUGGGACGACg | ::||||||| ucgagcuugcUGGUCCUGCUGu 2 13 291 312 [mm9:16:17087020-17087041:-] 0.4995 144 7 -16.42 -0.3739 MIMAT0004855 mmu-miR-876-3p 66053 Ppil2 acuuaaugaaacAUUUGGUGau |||||||| acaacaaggaaaUAAACCACau 3 11 553 574 [mm9:16:17086660-17086681:-] 0.5361 130 0 -9.11 -0.1670 MIMAT0004937 mmu-miR-875-5p 66053 Ppil2 guggacUAUUU-UGACUCCAUAu ||||: |:| |||||| ucaagaAUAAGCAUUAAGGUAUa 2 17 505 527 [mm9:16:17086707-17086729:-] 0.5565 131 6 -11.84 -0.1753 MIMAT0004937 mmu-miR-875-5p 66053 Ppil2 guggacUAUUU-UGACUCCAUAu ||||: |:| |||||| ucaagaAUAAGCAUUAAGGUAUa 2 17 603 625 [mm9:16:17086707-17086729:-] 0.5565 131 6 -11.84 -0.1631

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G066455 Ppil2 Mus musculus 66053

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ppil2 mmu-miR-187 beg:123 end:136 pic:3' GGCCGACGTTGTGTTCTGTGCT 5'& ||| ||||||| &5' ----------CAC-AGACACG- 3' Ppil2 mmu-miR-18astar beg:275 end:291 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& | | ||||||| &5' --------GTCCCCAGGGCAG- 3' Ppil2 mmu-miR-202-3p beg:106 end:125 pic:3' AGAAGGGTACGCGATATGGAGA 5'& |||. .|||||||| &5' -CTTTATT----TTATACCTC- 3' Ppil2 mmu-miR-2141 beg:61 end:71 pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||||| &5' -----------CACCTCC- 3' Ppil2 mghv-miR-M1-1 beg:451 end:478 pic:3' TTTCCTTCATGCC--GGTAAAGAT 5'& |..|||| .|||||||. &5' AGGGGAAAAAAAATCTCATTTCTG 3' Ppil2 mghv-miR-M1-1 beg:555 end:580 pic:3' TTTCCTTCATGCCG-GTAAAGAT 5'& |||||| || |||||||| &5' -AAGGAAATAAACCACATTTCTA 3' Ppil2 mmu-miR-92astar beg:50 end:69 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& |||.||. |||||||| &5' -----GCCGCCGC-CCCCACCT 3' Ppil2 mmu-miR-351 beg:1 end:21 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& |||||| ||| |||||||| &5' CAGGCT-----GGC--CTCAGGGA 3' Ppil2 mmu-miR-339-5p beg:154 end:173 pic:3' GCACTCGAGGACCTCCTGTCCCT 5'& .||| ||| |||||||| &5' ----GGCTA--GGA-GACAGGGA 3' Ppil2 mmu-miR-1933-3p beg:194 end:211 pic:3' TATCAGTGTGACTACCAGGACC 5'& .| .|| |||||||| &5' ------GC-TTGCTGGTCCTG- 3' Ppil2 mcmv-miR-m108-1 beg:421 end:440 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& |.||||. | ||||||| &5' ----ATGAGCT--CATCAGAAA 3' Ppil2 mcmv-miR-M23-1-3p beg:19 end:40 pic:3' CCGGA-GCCCGGCTGCGTCCTC 5'& ||| .|| .| .|||||| &5' --CCTGTGGA-TGCTGCAGGA- 3' Ppil2 mcmv-miR-M23-2 beg:46 end:66 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& ||| .||| ||||||| &5' --GCTC-GCCGCCGCCCCCA- 3' Ppil2 mcmv-miR-M23-2 beg:62 end:78 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& ||| |||||| &5' -------ACCTCCACCCCCA- 3' Ppil2 mmu-miR-103 beg:15 end:36 pic:3' AGTATC-GGGACATGTTACGACGA 5'& .| .|||||. .||||||| &5' ----GGATCCTGTG-GATGCTGC- 3' Ppil2 mmu-miR-107 beg:15 end:36 pic:3' ACTATC-GGGACATGTTACGACGA 5'& .| .|||||. .||||||| &5' ----GGATCCTGTG-GATGCTGC- 3' Ppil2 mmu-miR-1197 beg:282 end:304 pic:3' TCTTCATCTGGT-ACACAGGAT 5'& ..| ||.| |||||||| &5' --GGGCAGGCAGCTGTGTCCT- 3' Ppil2 mmu-miR-125a-5p beg:0 end:21 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .|||| || |||||||| &5' --GCAGGCT----GGCCTCAGGGA 3' Ppil2 mmu-miR-125b-5p beg:0 end:21 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& .||.| || |||||||| &5' --GCAGGCT--GGCCTCAGGGA 3' Ppil2 mmu-miR-129-3p beg:138 end:148 pic:3' TACGAAAAACCCCATTCCCGAA 5'& .|||||| &5' --------------GAGGGCT- 3' Ppil2 mmu-miR-129-5p beg:541 end:563 pic:3' CGTTCGGG--TCTGGCGTTTTTC 5'& ||. |||| |||..| &5' ---AGTAACAAGACAACAAGGA- 3' Ppil2 mmu-miR-130a beg:328 end:348 pic:3' TAC-GGGAAAATTGTAACGTGAC 5'& | || ..| |||||.| &5' --GACCACCAGGGC-TTGCATT- 3' Ppil2 mmu-miR-142-3p beg:513 end:538 pic:3' AGGT-ATTTCATCC-TTTGTGATGT 5'& || |||.||| |||.||||. &5' --CATTAAGGTATAAAAATACTAT- 3' Ppil2 mmu-miR-155 beg:499 end:522 pic:3' TGGGGATAGTG-TTAATCGTAATT 5'& || |||| ||| |||||||| &5' ---CC-ATCAAGAATAAGCATTAA 3' Ppil2 mmu-miR-17star beg:230 end:253 pic:3' GATGTTCACGGGA--GTGACGTCA 5'& . .|| || ||||||||| &5' --GTGGGTTCCACAGCACTGCAGT 3' Ppil2 mmu-miR-17star beg:288 end:311 pic:3' GATGTT--CACGGGAGT-GACGTCA 5'& .||. |||.|||| |||. &5' --GCAGCTGTGTCCTCTCCTGT--- 3' Ppil2 mmu-miR-1907 beg:195 end:217 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& .|.| | |.||| |||||.|| &5' GCTTGCTGGTCC--TGCTGTTC 3' Ppil2 mmu-miR-1937c beg:77 end:86 pic:3' ACCCCCGAGAAGGCCCTA 5'& |.|||| &5' -----------CTGGGA- 3' Ppil2 mmu-miR-1940 beg:50 end:72 pic:3' TTGACGA-GGTGGAAGAGTCAGGAGGTA 5'& || ||.|| | || |||||| &5' ----GCCGCCGCCC-C-CA--CCTCCA- 3' Ppil2 mmu-miR-1948 beg:414 end:423 pic:3' GACATGCTCACGAGACGGATTT 5'& ||||||.| &5' -------------CTGCCTGA- 3' Ppil2 mmu-miR-1968 beg:275 end:299 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |||| ||| ..||||||. &5' -GTCC-CCAGGGCAGGCAGCTGT- 3' Ppil2 mmu-miR-20bstar beg:232 end:253 pic:3' GATCTTCACGAG----TGTGACGTCA 5'& |.|| .||||||||| &5' --------GTTCCACAGCACTGCAGT 3' Ppil2 mmu-miR-2134 beg:269 end:289 pic:3' CGTG-GGGCAAAGGGTTCTG 5'& || ||.|| ||||.|.| &5' --ACACCTGTC-CCCAGGGC 3' Ppil2 mmu-miR-2140 beg:327 end:349 pic:3' TGGTGGTTCTAGACGTGGA 5'& |||||||.| .||||..| &5' ACCACCAGGGCTTGCATTT 3' Ppil2 mmu-miR-214 beg:194 end:215 pic:3' TGACGGACAGACACGGACGACA 5'& ||.|| ||| |||||||| &5' ---GCTTG-CTGGTCCTGCTGT 3' Ppil2 mmu-miR-2141 beg:104 end:126 pic:3' TTGAAA-AGACTGTGGAGGA 5'& |.|||| |.| |.|||||| &5' AGCTTTATTTTATACCTCC- 3' Ppil2 mmu-miR-214 beg:76 end:96 pic:3' TGACGGACAGACACGGACGACA 5'& |||| |.|||||| &5' ----CCTGGGAAC-CTTGCTGT 3' Ppil2 mmu-miR-21star beg:198 end:216 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& ||. .|| |||||||| &5' ----GCTGGTC--CTGCTGTT- 3' Ppil2 mmu-miR-23a beg:79 end:100 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||.|| ||.| || .||||| &5' GGGAA-CCTT-GCTGTGTGA- 3' Ppil2 mmu-miR-23b beg:79 end:100 pic:3' CCATTAGGGACCGTTACACTA 5'& || ||| || .||||| &5' GGGAA--CCTTGCTGTGTGA- 3' Ppil2 mmu-miR-2861 beg:46 end:64 pic:3' GGCGGGCGGCGGTCCGGGG 5'& ||.||||||| ||||| &5' --GCTCGCCGCC--GCCCC 3' Ppil2 mmu-miR-299star beg:557 end:572 pic:3' TACATACACCCTGCCATTTGGT 5'& ||| ||||||| &5' ---------GGAAA-TAAACCA 3' Ppil2 mmu-miR-30c-2star beg:119 end:128 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||||| &5' ---------------CTCCCA- 3' Ppil2 mmu-miR-327 beg:0 end:19 pic:3' TAGGAGTACGG--GGAGTTCA 5'& | || ||. |||||.| &5' --CAGCAGGCTGGCCTCAGG- 3' Ppil2 mmu-miR-330 beg:268 end:288 pic:3' CGGATTCTGTGT-CC-GGGTCTCT 5'& ||||| | |||||.| &5' ------GACACCTGTCCCCAGGG- 3' Ppil2 mmu-miR-3471 beg:390 end:412 pic:3' TTACGGAA-TGTCAACCTAGAGT 5'& |. ||| ||||||.|. &5' ---GTAAAGACACTTGGATTTT- 3' Ppil2 mmu-miR-380-3p beg:519 end:541 pic:3' TTCTACACC-TGG---TATGATGTAT 5'& || |. ||||||..|| &5' -------GGTATAAAAATACTATGTA 3' Ppil2 mmu-miR-383 beg:466 end:481 pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& ||| .||||||||| &5' --------TCA-TTTCTGATCT 3' Ppil2 mmu-miR-384-5p beg:171 end:193 pic:3' TGTAACGGATCCTTA--ACAAATGT 5'& ||| ||| |||||.| &5' -----GCCAAGGCGCTCTGTTTGC- 3' Ppil2 mmu-miR-431 beg:535 end:556 pic:3' ACGTACTGCCGGACGTTCTGT 5'& ||.|| || |. ||||||| &5' TGTAT-ACAGTAA-CAAGACA 3' Ppil2 mmu-miR-433 beg:416 end:438 pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& .| |.|| ||||.||||| || &5' GC-CTGATGAGCTCATCA-GA- 3' Ppil2 mmu-miR-449b beg:228 end:250 pic:3' CGGTCGAT-TGTTGTGACGGA 5'& |. .|.| |||.|||||| &5' GTGGGTTCCACAGCACTGC-- 3' Ppil2 mmu-miR-470star beg:189 end:207 pic:3' AGAAGAGTCTTTCCATGACCAA 5'& ||| ||. |.||||| &5' ----CTC-GAGCT-TGCTGGT- 3' Ppil2 mmu-miR-485 beg:241 end:260 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& || .| |.||||||. &5' -----CACTGCAGTCAGCCTT- 3' Ppil2 mmu-miR-503 beg:194 end:216 pic:3' GACGTCATGACAAGGGCGACGAT 5'& || |.||| |||.||||.| &5' --GCT-TGCTGGTCCTGCTGTT- 3' Ppil2 mmu-miR-544 beg:21 end:40 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||. |||||.| &5' -----TGTGGATGCTGCAGGA- 3' Ppil2 mmu-miR-546 beg:491 end:508 pic:3' CTGAGGC-ACGGTGGTA 5'& ||| | |||||.|| &5' GACA--GATGCCATCA- 3' Ppil2 mmu-miR-546 beg:326 end:337 pic:3' CTGAGGCAC-GGTGGTA 5'& | |||||| &5' --------GACCACCA- 3' Ppil2 mmu-miR-669e beg:534 end:556 pic:3' TACTTGTACGTGTG----TGTTCTGT 5'& .|||.|.|| |||||||| &5' -----TATGTATACAGTAACAAGACA 3' Ppil2 mmu-miR-670 beg:0 end:21 pic:3' AAGTGGTGTA--TGTGAGTCCCTA 5'& || || . .| ||||||||| &5' --CAGCAGGCTGGC-CTCAGGGAT 3' Ppil2 mmu-miR-680 beg:479 end:504 pic:3' GGGGGTACAGT--C-GTCTACGGG 5'& |..|| | |||||||| &5' -CTTCAAATACCTGACAGATGCC- 3' Ppil2 mmu-miR-684 beg:443 end:463 pic:3' AACTGA--ACTTCCCTTTTGA 5'& |||| |||.||||||| &5' --GACTTTTGAGGGGAAAA-- 3' Ppil2 mmu-miR-691 beg:20 end:41 pic:3' AAAAGACGGAGA-GAAGTCCTTA 5'& |||. || |||||| &5' ----CTGTGGATGCTGCAGGAA- 3' Ppil2 mmu-miR-696 beg:121 end:140 pic:3' GGGTGTC-GTTCGTGTGCG 5'& ||||||| || || ||| &5' CCCACAGACACGC-CAC-- 3' Ppil2 mmu-miR-705 beg:107 end:129 pic:3' ACGGGTGGG---GTGGAGGGTGG 5'& ||.. .||||||||| &5' -GCTTTATTTTATACCTCCCAC- 3' Ppil2 mmu-miR-705 beg:59 end:80 pic:3' ACGGGTGG-GGTGGAGGGTGG 5'& |||||| ||||| |||||| &5' --CCCACCTCCACC-CCCACC 3' Ppil2 mmu-miR-705 beg:46 end:68 pic:3' ACGGGTGG-GGTGGAGGGTGG 5'& ||.|.|| ||.|| |||||| &5' -GCTCGCCGCCGCC-CCCACC 3' Ppil2 mmu-miR-713 beg:88 end:110 pic:3' CGACACACGGAAGTCA-CGT 5'& |||||||| | ||| || &5' GCTGTGTGACGACAGGAGC- 3' Ppil2 mmu-miR-720 beg:3 end:21 pic:3' ACCT-CCGGGGTCGCTCTA 5'& || ||||.||| || &5' -GGCTGGCCTCAGGGA--- 3' Ppil2 mmu-miR-759 beg:177 end:189 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||.|||||. &5' -------------GCGCTCTGT 3' Ppil2 mmu-miR-760 beg:276 end:298 pic:3' AGGGGTGTCTGGGTC-TCGGC 5'& |||||| .|.| .| |||.| &5' TCCCCA-GGGCA-GGCAGCTG 3' Ppil2 mmu-miR-883a-5p beg:252 end:268 pic:3' CATTGACGATGAAGAGAGTCGT 5'& || ||| ||||||| &5' ------GC--CTTG-CTCAGCA 3' Ppil2 mmu-miR-92astar beg:60 end:80 pic:3' CATTACGGTGGTTA--GGGGTGGA 5'& ||||| ||||||| &5' ------CCACCTCCACCCCCACC- 3' Ppil2 mmu-miR-93star beg:252 end:269 pic:3' GCCCTTCACGAT-CGAGTCGTCA 5'& || ||||||||| &5' --------GCCTTGCTCAGCAG- 3' Ppil2 mmu-miR-99bstar beg:181 end:202 pic:3' GCCTGGGTGTCTGTGCTCGAAC 5'& .| . .| |||||||| &5' ----TCTGTTTGCTCGAGCTTG 3' Ppil2 mmu-miR-551b beg:348 end:359 pic:3' GACTTTGGTTCATACCCAGCG 5'& |||||||| &5' ------------ATGGGTCG- 3' Ppil2 mmu-miR-377 beg:84 end:100 pic:3' TGTTTTCAACGGAA--ACACACTA 5'& |||| ||||||| &5' ----------CCTTGCTGTGTGA- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ppil2 mmu-let-7b 24 46 -UUGGUG--UGUUGGAUGAUGGAGU ::|||| |||| ||||||| UGGCCACUCACAAGCUACUACA--- Ppil2 mmu-miR-103 87 135 -AGUA--UCGGGAC--------------AUG--------UUACGACGA ||| :||:||| |:| :||||||| CUCAGCGGGCUCUGAGACCCUGAUCCUUUGCUCCUAGUGGAUGCUGCA Ppil2 mmu-miR-107 90 135 ACUAUCGGGAC--------------AUG--------UUACGACGA | :||:||| |:| :||||||| AGCGGGCUCUGAGACCCUGAUCCUUUGCUCCUAGUGGAUGCUGCA Ppil2 mmu-miR-125a 2 22 GUGUCCAAUUUCCCAGAGUCCCU- :|||| || |||||||| AGCAGGCU----GGCCUCAGGGAU Ppil2 mmu-miR-125b 2 22 AGUGUUCAAUCCCAGAGUCCCU- :||:| || |||||||| -AGCAGGCU--GGCCUCAGGGAU Ppil2 mmu-miR-127 76 103 -CGGU--UCG--AGUCUGCCU-AGGCU- ||| :|: |||| |||: ||:|| AGCCCUCGGUUCUCAG-CGGGCUCUGAG Ppil2 mmu-miR-133a 246 278 -UGUCG--ACCAA--CU---UCCC-CUGGUU- ||||| ||| || |||| |:|||| GACAGCUUUGGCUAGGAGACAGGGAGGCCAAG Ppil2 mmu-miR-133b 253 278 -AUCGACCAACU-UCCC-CUGGUU- |:||| | || |||| |:|||| UUGGCUAGGAGACAGGGAGGCCAAG Ppil2 mmu-miR-134 398 421 -GGGGAGACCAGUUGGUCAGUGU- ||:||| ||| |||| |||| UCCUCUCCUGUCCUCCAG-CACAG Ppil2 mmu-miR-135b 255 277 GUGUAUCCUUA--CUUUUCGGUAU :| |||||: |::|:|||| GGC-UAGGAGACAGGGAGGCCAA- Ppil2 mmu-miR-140* 311 334 -AGGCACCAA--GAUGGGACACCAU |:| |||| || |||||||| GUUCUUGGUGAACU-CCCUGUGGG- Ppil2 mmu-miR-143 382 406 ACUCGA-UGUC-ACGAAGUAGAGU |:|| :||| ||: || |||| AGGGCAGGCAGCUGUGUCCUCUCC Ppil2 mmu-miR-146 66 92 -UUGGGUACCUUA---AGUCAAGAGU- :|||| ||| ||:||||||| GGACCCCA-GAAGCCCUCGGUUCUCAG Ppil2 mmu-miR-146b 75 92 -UCGGAUACCUUAAGUCAAGAGU- |||| ||:||||||| AAGCCC-------UCGGUUCUCAG Ppil2 mmu-miR-148a 326 348 UGUUUCAAGACAUCA-------CGUGACU ||||:| |||||| -------CCUGUGGGUUCCACAGCACUGC Ppil2 mmu-miR-149 259 277 CCUCACUUCUGUGCCUC-GGUCU |:||||| |||| ||| ----AGGAGACAGGGAGGCCAA- Ppil2 mmu-miR-17-3p 330 352 AUGUUCACGGGA--GUGACGUCA- ::|| || ||||||||| --UGGGUUCCACAGCACUGCAGUC Ppil2 mmu-miR-187 241 271 GGCCGAC-GUUG-------UGUUCUGUGCU- ||||| ||:| | :||||| |: -GGGCUGACAGCUUUGGCUAGGAGACAGGGA Ppil2 mmu-miR-192 439 459 -ACAGUUAA-GUAUCCAGUC- || || || |||:||||:| UUG-CAUUUCCAUGGGUCGGU Ppil2 mmu-miR-195 271 304 -CGGUUAUAA-AGACA--------CGA-CGAU- ||||| ||||| ||| |||: GGCCAAGGCGCUCUGUUUGCUCGAGCUUGCUGG Ppil2 mmu-miR-199a 1 28 CUUGUCC-AUCAGA---CUUGUGACCC |:|||| |:| || |:|: |||| CAGCAGGCUGGCCUCAGGGAUCCUGGC Ppil2 mmu-miR-199a* 379 399 UUGGUUACACGUCUGAUGACAU- |||: ||||:| :||||: -CCCAGG--GCAGGCAGCUGUGU Ppil2 mmu-miR-204 254 273 GUCCGUAUCCUACUGUUUCCCUU- ||| ||||| ||| |||||: -UGGC-UAGGA-GAC--AGGGAGG Ppil2 mmu-miR-207 238 275 -CUCCC---------------UCCUCUCGGUCCUCUUCG- ||||| |||||| |||| ||:|| AGAGGGCUGACAGCUUUGGCUAGGAGA--CAGG-GAGGCC Ppil2 mmu-miR-21 512 530 AGUUGUAGUCAGACUAUUCGAU ||| | |||||:|||| -AAACU---GCCUGAUGAGCUC Ppil2 mmu-miR-211 254 273 UCCGUUUCCUACUGUUUCCCUU- ||| |||| ||| |||||: UGGCU-AGGA-GAC--AGGGAGG Ppil2 mmu-miR-214 294 314 GACGGACAGACAC-GGACGACA- ||:|| ||| | |||||||| -AGCUUG-CUG-GUCCUGCUGUU Ppil2 mmu-miR-215 438 458 CAGACAGUUUAG-UAUCCAGUA :|| || || ||:||||: -CUUG-CAUUUCCAUGGGUCGG Ppil2 mmu-miR-217 325 352 UAGGUCAGUCAAGGACU----ACGUCAU || || :||||| |||||| -CCCUGUGGGUUCCACAGCACUGCAGUC Ppil2 mmu-miR-224 180 200 AUUUGCCUUGG--UGAU-CACUGAAU |||||| :||: ||||| ----GGGAACCUUGCUGUGUGACG-- Ppil2 mmu-miR-24 308 337 -GACAAGGACGACUUG------ACUCGGU ||||||:|| ||||| ||:|:: GCUGUUCUUGGUGAACUCCCUGUGGGUUC Ppil2 mmu-miR-291a-5p 237 258 UCUCUCCCGGAGG-UGAAACUAC |||||||: :|||||: -CAGAGGGCUGACAGCUUUGGC- Ppil2 mmu-miR-291b-3p 422 448 -CUGUUUGUUUUACCU--ACGUGAAA ||||:|| ||: ||||:|| GGACAGACCACCAGGGCUUGCAUUUC Ppil2 mmu-miR-291b-5p 237 258 CUCUCCCGGAGG-UGAAACUAG |||||||: :|||||: CAGAGGGCUGACAGCUUUGGC- Ppil2 mmu-miR-296 257 276 UGUCCUAACUCCCCCCCGGGA :|||| |||| |||| CUAGGAGACAGGGA-GGCCA- Ppil2 mmu-miR-298 382 407 -CCUUCUUGUCGGG--AGGAGACGG- ||: ::||||: |||||| || AGGGCAGGCAGCUGUGUCCUCU-CCU Ppil2 mmu-miR-29a 35 56 -UUGGCUAAAGUCUACCACGAU |:|: ||:|||||: AAGCUACUACAAGGUGGUGUC- Ppil2 mmu-miR-29b 101 134 -UUGUGACUA--AAGU-----UUACC-ACGAU- :|| ||||| ||:: |:||| ||||: AGACCCUGAUCCUUUGCUCCUAGUGGAUGCUGC Ppil2 mmu-miR-30c 255 292 -CGACUCUCACAUCCU-------------ACAAAUGU ||| :||| :||| |||||:| GGCUAGGAGACAGGGAGGCCAAGGCGCUCUGUUUGCU Ppil2 mmu-miR-324-3p 359 390 -GGUCGUCG----UGGAC------CCCGUCACC :||||||| ||||| |||||| CUCAGCAGCCGACACCUGUCCCCAGGGCAGG-- Ppil2 mmu-miR-324-5p 110 132 GUGGUUACG-GGAUCCCCUACGC || ||| ||||| |||||| -UCCUUUGCUCCUAGUGGAUGCU Ppil2 mmu-miR-328 253 277 UGCCU-UCC-C-GUCUCUCCCGGUC :|| ||| | |||:|| ||||| UUGGCUAGGAGACAGGGA-GGCCAA Ppil2 mmu-miR-330 85 119 -AGAGACGUCCGGGACAC---------GAAACG- |||| ||:|||:||| |||||| UUCUCAGCGGGCUCUGAGACCCUGAUCCUUUGCU Ppil2 mmu-miR-331 256 283 AAGAUCCUA------UCCGGGUCCCCG- |||||| ||||| ||| || -GCUAGGAGACAGGGAGGCCAAGGCGCU Ppil2 mmu-miR-339 240 272 ACUCGA------GGACC---UC-CUGUCCCU- |:||| ::||| :| |||||||| AGGGCUGACAGCUUUGGCUAGGAGACAGGGAG Ppil2 mmu-miR-340 241 271 -CCGAUAUUUC---AUUGA--CUCUG-CCU- ||||: || |::|| ||||| ||: GGGCUGAC-AGCUUUGGCUAGGAGACAGGGA Ppil2 mmu-miR-342 178 202 CUGCCCACGCUAAAGACACACU-CU- :||| |||||||| || -CUGGGAACCUUG-CUGUGUGACGAC Ppil2 mmu-miR-344 235 263 -UGUCAGUC------CGAAACCGAUCUAGU |||| :| |||||||||||: CACAGAGGGCUGACAGCUUUGGCUAGGA-- Ppil2 mmu-miR-345 429 460 CGUGA-CCUGAUC---------CCCAGUCGU ||| ||:|| |||||:|: CCACCAGGGCUUGCAUUUCCAUGGGUCGGUU Ppil2 mmu-miR-34c 345 370 -CGUUAGUCGAU-UGAUGUGACGGA |||:||||| :|| :| ||| UGCAGUCAGCCUUGCUCAGCAGCCG Ppil2 mmu-miR-351 3 22 -GUCCGAGUUUCCCGAGGAGUCCCU- |||||| ||| |||||||| GCAGGCU-----GGC--CUCAGGGAU Ppil2 mmu-miR-362 251 272 AAGUGUGGAUCCAAGGUUCCUAA |: : ||||| ||:||| CUUUGG-CUAGGAGACAGGGAG- Ppil2 mmu-miR-370 61 98 UUGGUCCAA-GGU------------GGGGUCGUCCG- |:|||| ||| :|:||||:||| CAUCAGGACCCCAGAAGCCCUCGGUUCUCAGCGGGCU Ppil2 mmu-miR-375 126 146 AGUGCGCUCGG-CUUGCUUGUUU |:|| || ||||||||: -GAUGCU-GCAGGAACGAACGU- Ppil2 mmu-miR-377 174 199 -UGUUUUCAACGGAA--ACACACUA || :| |||| ||||||| CACCCUGGGAACCUUGCUGUGUGAC Ppil2 mmu-miR-378 235 273 -UGUGUCCUGGA-------------CCUCAG-UCCUC- ||| |||:|: |||| :|||| CACAGAGGGCUGACAGCUUUGGCUAGGAGACAGGGAGG Ppil2 mmu-miR-424 117 135 -AGGUUUUGUACUUAACGACGAC ||| :||:| |||||| CUCCUA---GUGGA-UGCUGCA- Ppil2 mmu-miR-429 472 495 -UGCCGUAAU--GGUCUGUCAUAAU |:||:| ::|||||||| AAUGGUAGUGUUUUAGACAGUAA-- Ppil2 mmu-miR-433-3p 516 537 -UGUGGCUCCUCGGGUAGUACUA :| |:|| ||||:||||| || UGC-CUGAUGAGCUCAUCA-GAA Ppil2 mmu-miR-433-5p 139 156 CUUAUUACUGU--CCGAGUGGCAU || |||||:||| ------CGAACGUGGCUCGCCGC- Ppil2 mmu-miR-449 232 277 -UGG------UCGAUUGUU--AUGUGA-------------CGGU :|| :|||:|||: | :|| |||| CGCCACAGAGGGCUGACAGCUUUGGCUAGGAGACAGGGAGGCCAA Ppil2 mmu-miR-455-3p 316 350 -UCACAUAUACGGGCACC----------UGACGUA :||| ||:|||| |||||| UGGUGAACUC-CCUGUGGGUUCCACAGCACUGCAG Ppil2 mmu-miR-465-3p 94 113 AGAUGAAUCUUUCCGGGACUAG- :|| :|| |||||||| --GGCUCU--GAGACCCUGAUCC Ppil2 mmu-miR-469 240 282 -CCUG-----------UGGUUCUAGUUACUUUC---UCCGU ||:| :|:|:|| |:|:| ||||: AGGGCUGACAGCUUUGGCUAGGAGACAGGGAGGCCAAGGCGC Ppil2 mmu-miR-470 429 455 AGUGGUCACGGUC----AGGUUCUU- |||||| ||: |||| |:: CCACCAGGGCUUGCAUUUCCAUGGGU Ppil2 mmu-miR-471 606 640 ACACUU-UUCGUGAU-----------AUGAUGCAU- ||| |||||:|| |||||:||| --AGAAUAAGCAUUAAGGUAUAAAAAUACUAUGUAU Ppil2 mmu-miR-484 80 111 UAGCCC----UC-CCCU-GACUC--GGACU- |||| || ||| ||||| ||||| CUCGGUUCUCAGCGGGCUCUGAGACCCUGAU Ppil2 mmu-miR-485-3p 179 203 CUCUCCUCU---CGGCACAUA-CUGA :||| ||:||||: ||| --UGGGAACCUUGCUGUGUGACGACA Ppil2 mmu-miR-485-5p 1 17 CUUAAGUAGUGCCGGUCGGAGA || || |||::||||| -----CAGCA-GGCUGGCCUCA Ppil2 mmu-miR-487b 121 143 -UCACCUAC--UGGGACAUGCUAA |||||||| :| | |||| UAGUGGAUGCUGCAG-GAACGAA- Ppil2 mmu-miR-489 36 58 CGACGGUAUAUA--CACCACAGUAA ||:| ||||||||| --AGCUACUACAAGGUGGUGUCAG- Ppil2 mmu-miR-490 360 386 -GUCGUAC-CU-----CAGGAGGUCCAAC ||||| || |||| ||||| UCAGCAGCCGACACCUGUCC-CCAGGG-- Ppil2 mmu-miR-495 265 291 -UUCUUCA-----CGUGGUACAAACAAA |:|:|| ||:|: |||||| CAGGGAGGCCAAGGCGCUCUGUUUGC-- Ppil2 mmu-miR-503 294 315 -CGUCAUGACAAGGGCGACGAU || |:||| |||:||||:| AGCU-UGCUGGUCCUGCUGUUC Ppil2 mmu-miR-505 179 201 UCUUUUGGU-CGUUCACAACUGC- |::|||| || |||| |||| UGGGAACCUUGCU-GUGU-GACGA Ppil2 mmu-miR-541 50 74 ACACUGG--UUGUAGUCUUAGGGAA ||| | |:||||||:| ||| GGUGUCAGAAGCAUCAGGACCCCA- Ppil2 mmu-miR-542-5p 309 333 GCACUGU-ACUACU--AGGGGCUC- || ||:||| ||||:| | -CUGUUCUUGGUGAACUCCCUGUGG Ppil2 mmu-miR-546 145 159 -CUGAGGCACGGUGGUA |:||| |||:||: UGGCUC---GCCGCCGC Ppil2 mmu-miR-551b 415 458 -GUGACUU--------UGGUUCA-----------UACCCAGC ||| ||: ||||:| |||||||| GCACAGAGGACAGACCACCAGGGCUUGCAUUUCCAUGGGUCGG Ppil2 mmu-miR-615 260 281 -UUCU--CCCUCUGGGUCCGAGCCU :||| |||||:|| |||| GGAGACAGGGAGGCCAAGGCG---- Ppil2 mmu-miR-665 4 28 AUUCC--CUGGAGUCGG-AGGACCA ||| |:|||||| |||||| -CAGGCUGGCCUCAGGGAUCCUGGC Ppil2 mmu-miR-666 383 405 -CCGAGAGUGUCGACACGGGCGA- ||| :||||||||:|| || GGGCAG--GCAGCUGUGUCCUCUC Ppil2 mmu-miR-668 178 201 CCAUCACCC--GGCUCGGCUCACUGU- |||| || ||:| |||||: ----CUGGGAACCUUGCUGUGUGACGA Ppil2 mmu-miR-671 408 444 -GGAGGUCGG-----------GGAGGUCCCGAAGGA |||||||| || ||||||||| | UCCUCCAGCACAGAGGACAGACCACCAGGGCUUGCA Ppil2 mmu-miR-672 340 364 GUGUG-UGUCAUGUGGUUGGAGU- :||| :|||| :|| |||| AGCACUGCAGUCAGCCUUGCUCAG Ppil2 mmu-miR-673 164 198 -GAGGU----------UCC-UGGUCUCGACACUC- ||||| :|| ||| |||||| | CCUCCACCCCCACCCUGGGAACCUU-GCUGUGUGA Ppil2 mmu-miR-675-5p 326 347 UGACACCCGGGAAAGGCGUGGU |||||||::| ||||: CCUGUGGGUUCCACA-GCACUG Ppil2 mmu-miR-676 357 391 UCGAGUUGUUGGA-----------GUCCUG-CC- |||||:||:|| ||||:| || UGCUCAGCAGCCGACACCUGUCCCCAGGGCAGGC Ppil2 mmu-miR-681 288 313 UCGA---CGGACGGUCGCUCCGAC- ||| ||:|||::|: |||| UGCUCGAGCUUGCUGGUCCUGCUGU Ppil2 mmu-miR-682 100 137 GUCUG--------AAGUGA----CAC---UGACGUC- |||| ||::|| ||| :|||||| GAGACCCUGAUCCUUUGCUCCUAGUGGAUGCUGCAGG Ppil2 mmu-miR-683 238 263 -CUCCUG--UGUCGAAUGUCGUCC- ||||:| ||||||| : :||| AGAGGGCUGACAGCUUUGGCUAGGA Ppil2 mmu-miR-684 543 562 AACUGA--ACUUCCCUUUUGA |||| |||:||||||| -GGACUUUUGAGGGGAAAAA- Ppil2 mmu-miR-687 186 207 AGUAACGACGUAAG---GUCCUAUC ||||||::| ||||| --CUUGCUGUGUGACGACAGGAG-- Ppil2 mmu-miR-689 65 106 -CCUGGGG----CGGC---------UCGCCC------CUGC ||||||| ||| |||||| ||| AGGACCCCAGAAGCCCUCGGUUCUCAGCGGGCUCUGAGACC Ppil2 mmu-miR-693-3p 228 259 AAUGU-CGGUGUA----GACUUUCGA---CG- ||| |||||| |||| |||| || -GACACGCCACAGAGGGCUGACAGCUUUGGCU Ppil2 mmu-miR-700 65 95 CCACCUG-----------AGCCAAGGG-CGCAC |||| |||||||:| ||| --AGGACCCCAGAAGCCCUCGGUUCUCAGCGG- Ppil2 mmu-miR-701 77 99 AGGUAGAUAA-AGUCG-CCGAUU || || :|| ||||| |||| GCCCUCGGUUCUCAGCGGGCUC- Ppil2 mmu-miR-705 146 167 ACGGGUGG-GGUGGAGGGUGG- ||:|:|| ||:|| |||||| GGCUCGCCGCCGCC-CCCACCU Ppil2 mmu-miR-709 397 415 -AGGAGGACGGAGACGGAGG- |||||: ||| | ||||| GUCCUCU--CCUGU-CCUCCA Ppil2 mmu-miR-711 306 339 GAAUGU--AGA-------GAGGGG--CCCAGGG- |:| ||| |||||: ||||:|| -CUGCUGUUCUUGGUGAACUCCCUGUGGGUUCCA Ppil2 mmu-miR-712* 128 154 GUUGUGGGCCCC-----CACUGAGCGU :| | || |||:||||| -UGCUGCAGGAACGAACGUGGCUCGCC Ppil2 mmu-miR-717 267 291 -UCUCU---UCCAUAGAGACAGACUC :|||: ||| ||||||:|| GGGAGGCCAAGGCG-CUCUGUUUGC- Ppil2 mmu-miR-718 367 394 -GCUGUGGGCC--GG-CCCG-CCUUC- |||||||:| || |||| || || CCGACACCUGUCCCCAGGGCAGGCAGC Ppil2 mmu-miR-744 282 311 CGACAA------UCGG--GAUCGGGGCGU ||||| |||: ||:|:||:|| UCUGUUUGCUCGAGCUUGCUGGUCCUGCU Ppil2 mmu-miR-759 264 288 CAGUUUUAACAAA--CGUGAGACG- ||::: | ||:|||||: -ACAGGGAGGCCAAGGCGCUCUGUU Ppil2 mmu-miR-761 327 366 -ACACA--------------GUCAAAGUGGGACGA--CG- |||| |||| :||:|||| || CUGUGGGUUCCACAGCACUGCAGUCA-GCCUUGCUCAGCA Ppil2 mmu-miR-762 279 309 -CGAGACA---GGGC-CGG--GGUCGGGG- ||||||| |:|| ||: |::|:||: CGCUCUGUUUGCUCGAGCUUGCUGGUCCUG Ppil2 mmu-miR-763 325 344 CGGUGACCAAGAAGG-GUCGACC || ||| |||| |||| CCCUGUGGG--UUCCACAGCA-- Ppil2 mmu-miR-770-3p 331 373 GGUCGAGGUG---------CAGUC------------CGGGUGC :|:||||| ||||| ||| || -GGGUUCCACAGCACUGCAGUCAGCCUUGCUCAGCAGCCGACA Ppil2 mmu-miR-801 328 353 -CAGCUAAGGCGUGCGUGUCGUUAG- || |:|||| || |||| |||:|| UGUGGGUUCCACA-GCACUGCAGUCA Ppil2 mmu-miR-9* 453 472 UGAAAGCCAAUAGA--UCGAAAU ||||||:||| ||||| ---GUCGGUUGUCUAUAGCUUA- Ppil2 mmu-miR-93 322 347 -GAUGGACGUGCU---UGUCGUGAAAC || ||||: | |||||||| ACUCCCUGUGGGUUCCACAGCACUG-- Ppil2 mmu-miR-99a 63 97 UGUUCU------------AGCCUAGA--UGCCCA ||:|| |||| ||| :|||| UCAGGACCCCAGAAGCCCUCGGUUCUCAGCGGGC Ppil2 mmu-miR-103 127 134 AGUAU-------------------CG-GGA-CAUGUUACGACGA || ||| ||: :||||||| CGGGCUCUGAGACCCUGAUCCUUUGCUCCUAGUG-GAUGCUGCA Ppil2 mmu-miR-107 127 134 ---------------ACUAU----CG-GGA-CAUGUUACGACGA |||| || ||| ||: :||||||| CGGGCUCUGAGACCCUGAUCCUUUGCUCCUAGUG-GAUGCUGCA Ppil2 mmu-miR-155 612 619 ---------------------GGGGAUAGUG-UUAAUCGUAAUU : || |||| ||| |||||||| UCUCUUCAAAUACCUGACAGAUGCC-AUCAAGAAUAAGCAUUAAG Ppil2 mmu-miR-17-3p 343 350 --------------------AUGUUCACGGGA--GUGACGUCA |: :|| || ||||||||| GCUGUUCUUGGUGAACUCCCUGUGGGUUCCACAGCACUGCAGUC Ppil2 mmu-miR-187 227 234 GGCCGACGUUG-UGU------------------------UCUGUGCU || || ||| ||||||| G----UGUGACGACAGGAGCUUUAUUUUAUACCUCCCACAGACACGC Ppil2 mmu-miR-214 305 312 GA-----------------------CGGACAGACACGGACGACA ||:|| ||| |||||||| AGGCCAAGGCGCUCUGUUUGCUCGAGCUUG-CUGGUCCUGCUGUU Ppil2 mmu-miR-22 388 395 ----------UGUCA---------AGAAGU--UGACCGUCGAA :||| || || :| ||||||| GCCUUGCUCAGCAGCCGACACCUGUCCCCAGGGCAGGCAGCUG Ppil2 mmu-miR-300 438 445 -----------------CUUCUCUCGAACGG----GAACGUAU ||:|| || || ||||||| UCCUGUCCUCCAGCACAGAGGACAGACCACCAGGGCUUGCAUU Ppil2 mmu-miR-320 248 255 AA-----------------GCGGGAGAG-UUGG--GUCGAAAA |||| ::|: ||||||| UUUAUACCUCCCACAGACACGCCACAGAGGGCUGACAGCUUUG Ppil2 mmu-miR-339 263 270 AC-------------------UCGAGGA----CCUCCUGUCCCU ||||:: ||| |||||||| GACACGCCACAGAGGGCUGACAGCUUUGGCUAGGA-GACAGGGAG Ppil2 mmu-miR-377 191 198 -------------------UGUUUUCAACGGAA--ACACACUA || :| |||| ||||||| CGCCCCCACCUCCACCCCCACCCUGGGAACCUUGCUGUGUGAC Ppil2 mmu-miR-383 572 579 UCGGUGUC----------------------AGUGGAAGACUAGA ||| :||||||||| AAUAAAGGACUUUUGAGGGGAAAAAAAAUCUCA-UUUCUGAUCUC Ppil2 mmu-miR-465-3p 104 111 AGA-----------------------UGAAUCUUUCCGGGACUAG :|| ||:| |||||||| CCCCAGAAGCCCUCGGUUCUCAGCGGGCUCUGAGA--CCCUGAUCC Ppil2 mmu-miR-551b 449 456 --GUGACUU--------UGGUUCA-----------UACCCAGC ||| ||: ||||:| |||||||| AGCACAGAGGACAGACCACCAGGGCUUGCAUUUCCAUGGGUCGG Ppil2 mmu-miR-680 595 602 G----GGGGUACAGU-----------------C-GUCUACGGG :|:||| || | |||||||| AAAAAUCUCAUUUCUGAUCUCUUCAAAUACCUGACAGAUGCCA Ppil2 mmu-miR-705 220 227 A--------------------CGGGUGGG---GUGGAGGGUGG ||:: :||||||||| CCUUGCUGUGUGACGACAGGAGCUUUAUUUUAUACCUCCCACA Ppil2 mmu-miR-761 305 312 ACACAGUCAAAGU---------------------GGGACGACG :|||||||: AGGCCAAGGCGCUCUGUUUGCUCGAGCUUGCUGGUCCUGCUGUU Ppil2 mmu-let-7b 25 48 uuGGU--GUGUUGGAUGAUGgagu ||| ||||| ||||||| ggCCACTCACAAGCTACTACaagg Ppil2 mmu-miR-103 111 134 aGUAUCG-GGA-CAUGUUACGACGa | | || ||| ||: :||||||| cCTTTGCTCCTAGTG-GATGCTGCa Ppil2 mmu-miR-107 111 134 acuAUCG-GGA-CAUGUUACGACGa | || ||| ||: :||||||| cctTTGCTCCTAGTG-GATGCTGCa Ppil2 mmu-miR-125a 1 20 GU-GUCCAAUUUCCCAGAGUCCCU || |||| | || |||||||| CAGCAGGCT----GGCCTCAGGGA Ppil2 mmu-miR-125b 1 20 aGU-GUUCAAUCCCAGAGUCCCU || ||:| | || |||||||| -CAGCAGGCT--GGCCTCAGGGA Ppil2 mmu-miR-127 77 101 CGG--UUC--GAGUCUGCCUAGGCU ||| :| ||||| || ||:|| GCCCTCGGTTCTCAGCGGGCTCTGA Ppil2 mmu-miR-133a 247 276 UGUCG--ACC-AACUUC---CCCU--GGUU ||||| ||| | |:|| |||| |||| ACAGCTTTGGCTAGGAGACAGGGAGGCCAA Ppil2 mmu-miR-133b 254 276 AUCGACCAACU-UCCC-CUGGUU |:||| | || |||| |:|||| TGGCTAGGAGACAGGGAGGCCAA Ppil2 mmu-miR-134 399 419 GGGGAGACCAGUUGGUCAGUGU ||:||| ||| |||| |||| CCTCTCCTGTCCTCCAG-CACA Ppil2 mmu-miR-135b 254 277 guguAUCCUU--ACUUUUCGGUau |||||: |::|:|||| tggcTAGGAGACAGGGAGGCCAag Ppil2 mmu-miR-140* 312 334 AGGCACCA--AGAUGGGACACCau |:| |||| || |||||||| TTCTTGGTGAACT-CCCTGTGGgt Ppil2 mmu-miR-146 68 90 UUGGGUACCUU---AAGUCAAGAGU | |||| ||| ||:||||||| ACCCCA--GAAGCCCTCGGTTCTCA Ppil2 mmu-miR-146b 68 90 UCGGAUACCUU---AAGUCAAGAGU | || | ||| ||:||||||| ACCCCA--GAAGCCCTCGGTTCTCA Ppil2 mmu-miR-149 255 277 CCUCACUUCUGUGCCU-CGGUcu || |:||||| ||| |||| GGCTAGGAGACAGGGAGGCCAag Ppil2 mmu-miR-155 598 619 ggGGAUAG-UGUUAAUCGUAAUU || ||| | ||| |||||||| tgCC-ATCAAGAATAAGCATTAA Ppil2 mmu-miR-17-3p 328 350 AUGUUCACGG-G-AGUGACGUCA |::::|| || | ||||||||| TGTGGGTTCCACAGCACTGCAGT Ppil2 mmu-miR-187 216 234 ggccGACGUUGUGUUCUGUGCu || | ||| ||||||| atacCTCC--CAC-AGACACGc Ppil2 mmu-miR-187 240 269 ggCCGAC-GUUG-------UGUUCUGUGCu ||||| ||:| | :||||| | agGGCTGACAGCTTTGGCTAGGAGACAGGg Ppil2 mmu-miR-192 440 457 ACAGUUAA-GUAUCCAGUC || || || |||:||||:| TG-CATTTCCATGGGTCGG Ppil2 mmu-miR-195 289 314 CG-GUUAUAAAGAC----ACGACGAu || |:| || ||| |||||:| GCTCGAGCTTGCTGGTCCTGCTGTTc Ppil2 mmu-miR-199a* 378 397 uuGGUUACACGUCUGAUGACAu ||| | ||||:| :|||| ccCCA--GGGCAGGCAGCTGTg Ppil2 mmu-miR-204 248 271 GUCCGUAUCC--UACUGUUUCCCUu || || | || | || | ||||| CA-GCTTTGGCTAGGAGACAGGGAg Ppil2 mmu-miR-207 239 268 CUCCCUCCUCU------CGGUCCUCU-UCg ||||| || | ||:|||||| || GAGGGCTGACAGCTTTGGCTAGGAGACAGg Ppil2 mmu-miR-21 508 529 AGUUGUAGUCAGACUAUUCGAu |::| | | | |||||:|||| TTGAAAACTGCCTGATGAGCTc Ppil2 mmu-miR-214 293 312 gaCGGACAGACACGGACGACA ||:|| ||| |||||||| gaGCTTG-CTGGTCCTGCTGT Ppil2 mmu-miR-215 436 457 CAGACAGUUUA-GUAUCCAGua | || || | |||:|||| GGCTTGCATTTCCATGGGTCgg Ppil2 mmu-miR-217 324 351 uaGGUCAGUCAAG--GAC--UACGUCAu || || :|||| | | |||||| tcCCTGTGGGTTCCACAGCACTGCAGTc Ppil2 mmu-miR-22 372 395 UGUCAAGAAGU--UGACCGUCGAa || || || :| ||||||| ACCTGTCCCCAGGGCAGGCAGCTg Ppil2 mmu-miR-224 176 201 auuugCCUUGG--UGAU-CACUGaau |||||| :||: ||||| ccctgGGAACCTTGCTGTGTGACgac Ppil2 mmu-miR-24 331 352 gaCAAGGACGACUUGAC-UCGGU ||||| | | |||| ||:|| ggGTTCC-ACAGCACTGCAGTCA Ppil2 mmu-miR-291a-5p 236 258 UCUCUCCCGGAGGU-GAAACuac | |||||||: || ||||| ACAGAGGGCTGACAGCTTTGgct Ppil2 mmu-miR-291b-3p 423 447 CUGUUUGUUUUACCU--ACGUGAAa ||||:|| | ||: ||||:|| GACAGACCACCAGGGCTTGCATTTc Ppil2 mmu-miR-291b-5p 237 258 cUCUCCCGGAGGU-GAAACuag |||||||: || ||||| cAGAGGGCTGACAGCTTTGgct Ppil2 mmu-miR-296 247 276 UGUCCUAAC---UCC-----CCC-CCGGga |||| ||| ||| ||| |||| ACAGCTTTGGCTAGGAGACAGGGAGGCCaa Ppil2 mmu-miR-298 384 406 CCUUCUUGUCG--GGAGGAGACGg || || :|||| : |||||| | GGCAG-GCAGCTGTGTCCTCTCCt Ppil2 mmu-miR-29a 35 56 UUGGCUAAAG-UCUACCACgau || | | | | ||:||||| AAGCTACTACAAGGTGGTGtca Ppil2 mmu-miR-29b 102 132 uUGUGACU---AAA----GUUUACC-ACGAu || |||| ||| | |:||| |||| gACCCTGATCCTTTGCTCCTAGTGGATGCTg Ppil2 mmu-miR-300 420 445 CUUCUCUC----GAACGGGAACGUAu ||:|| || | | ||||||| GAGGACAGACCACCAGGGCTTGCATt Ppil2 mmu-miR-30c 264 291 cGACUCUCAC--AUCC----UACAAAUGu | |:||| | ||| |||||:| aCAGGGAG-GCCAAGGCGCTCTGTTTGCt Ppil2 mmu-miR-320 230 255 aaGCGG-GAGAGUUGG--GUCGAAAa |||| | ::|: ||||||| caCGCCACAGAGGGCTGACAGCTTTg Ppil2 mmu-miR-324-3p 360 391 gGUCGUC----GUGGAC------CCCGUCacc |||||| |||||| |||||| tCAGCAGCCGACACCTGTCCCCAGGGCAGgca Ppil2 mmu-miR-324-5p 109 131 guGGUUACG-GGAUCCCCUACGc || ||| ||||| |||||| atCCTTTGCTCCTAGTGGATGCt Ppil2 mmu-miR-328 258 276 ugCCUUCCCGUCUCUCCCGGUc ||| | |||:|| ||||| taGGA--GACAGGGA-GGCCAa Ppil2 mmu-miR-330 95 117 aGAGACGUCCGGGAC-ACGAAACG ||||| || ||||| | |||||| gCTCTG-AGACCCTGATCCTTTGC Ppil2 mmu-miR-331 255 281 aaGAUCCU------AUCCGGGUCCCCG |||||| ||||| ||| || ggCTAGGAGACAGGGAGGCCAAGGCGC Ppil2 mmu-miR-339 247 270 acUCGAG---GACCUCCUGUCCCU ||||: || |: |||||||| acAGCTTTGGCTAGGAGACAGGGA Ppil2 mmu-miR-340 242 269 CCGAUAUUUC---AUUGA--CUCUG-CCu ||||: | || |::|| ||||| || GGCTG-ACAGCTTTGGCTAGGAGACAGGg Ppil2 mmu-miR-342 177 199 cugCCCACGCUAAAGACACACUcu ||| | || |||||||| cctGGGAAC-CTTGCTGTGTGAcg Ppil2 mmu-miR-344 243 264 uGUCAGUCCGAAACCGAUCuagu | | || ||||||||||| gCTGACA-GCTTTGGCTAGgaga Ppil2 mmu-miR-345 441 459 CGUGACCUGAUCCCCAGUCgu |||:| | | |||||:| GCATT--TCCATGGGTCGGtt Ppil2 mmu-miR-34c 326 349 cGUUAGUCGA-UUGAUGUGACGga | :| :|:| || :|||||| cCTGTGGGTTCCACAGCACTGCag Ppil2 mmu-miR-34c 358 379 CGUUAGUCGAUUGAUGU-GACGGa || ||||| : | ||| |||:| GC--TCAGCAGCCGACACCTGTCc Ppil2 mmu-miR-351 4 20 GUCCGAGUUUCCCGAGGAGUCCCU |||||| || ||||||||| CAGGCT-----GG--CCTCAGGGA Ppil2 mmu-miR-362 261 281 aagUGUGGAUCCAAGGUUCCuaa ||| ||| |||||| gagACAGGGAGG--CCAAGGcgc Ppil2 mmu-miR-370 78 96 uuGGUCCAAGGUGGGGUCGUCCG |: |||| |:||||:||| ccCTCGGTT----CTCAGCGGGC Ppil2 mmu-miR-370 42 68 uUGGUCCA----AGGUGGGGUCGUCCg || |||| || : || |||| tACAAGGTGGTGTCAGAAGCATCAGGa Ppil2 mmu-miR-375 125 146 agUGCGCUCG-GCUUGCUUGuuu |:|| || |||||||| ggATGC-TGCAGGAACGAACgtg Ppil2 mmu-miR-378 245 270 ugUGUC----CUGGACCUCAGUCCuc |||| |:|: |||| |||| tgACAGCTTTGGCTAGGAGACAGGga Ppil2 mmu-miR-383 557 579 ucggUGUCAGUG-GAAGACUAGA | | || | :||||||||| aaaaAAAATCTCATTTCTGATCT Ppil2 mmu-miR-424 118 135 AGGUUUUGUACUUAACGACGac ||| | :||:| |||||| TCCTA---GTGGA-TGCTGCag Ppil2 mmu-miR-429 473 496 UGCCGUAAU--GGUCUGUCAUaau |:||:| |: ::|||||||| ATGGTAGTGTTTTAGACAGTAaag Ppil2 mmu-miR-433-5p 136 156 CUUAUUACUGU-CCGAGUGGCau ||| :| ||: |||||:||| GAACGA--ACGTGGCTCGCCGcc Ppil2 mmu-miR-449 218 236 UGGUCGAUUGUUAUGUGACGGU ||| | |||: |||| |||| ACC-TCCCACAG-ACAC-GCCA Ppil2 mmu-miR-455-3p 326 349 ucACAUAUACGGGCACCUGACGUa |||: :| || | |||||| ccTGTGGGTTCCACAGCACTGCAg Ppil2 mmu-miR-465-3p 95 111 aGAUGAAUCUUUCCGGGACUAG || || ||| |||||||| gCT-CTGAGA----CCCTGATC Ppil2 mmu-miR-469 245 274 cCUGUGG--UUCUAGUUAC--UUUCUCCGu |||| | :| | :: | |::||||| tGACAGCTTTGGCTAGGAGACAGGGAGGCc Ppil2 mmu-miR-471 604 638 acaCUU-UUCGUGA-----------UAUGAUGCAU ||| |||||:| ||||||:||| caaGAATAAGCATTAAGGTATAAAAATACTATGTA Ppil2 mmu-miR-485-3p 175 199 cucucCUCUCGG--C-ACAUACUGa |:|| || | |||:|||| accctGGGAACCTTGCTGTGTGACg Ppil2 mmu-miR-487b 122 143 UCACCUACUG-GGACAUGCUaa |||||||| : | | |||| AGTGGATGCTGCAGGAACGAac Ppil2 mmu-miR-489 37 58 CGACGGUAUAUACACCACAGUaa ||| |:| | | ||||||||| GCTACTACA-AGGTGGTGTCAga Ppil2 mmu-miR-490 361 387 GUCGUAC--CU-----CAGGAGGUCCaac ||||| | || |||| ||||| CAGCA-GCCGACACCTGTCC-CCAGGgca Ppil2 mmu-miR-495 272 292 uucUUCACGUGGUACAAACAAa ||| ||:|: |||||| | gccAAG-GCGCTCTGTTTGCTc Ppil2 mmu-miR-503 295 314 CGUCAUGACAAGGGCGACGAu || |:||| |||:||||:| GC-TTGCTGGTCCTGCTGTTc Ppil2 mmu-miR-541 58 82 acacUGGU--UGUAGUCUUAGGGAa |:|| || ||||| |||| aagcATCAGGACCCCAGAAGCCCTc Ppil2 mmu-miR-546 146 164 CUGA--GGC-ACGGUGGUa |:|| ||| ||| ||| GGCTCGCCGCCGCCCCCAc Ppil2 mmu-miR-551b 430 456 GUGACUUUG---GUUCA--UACCCAGC ||| :::| || | |||||||| CACCAGGGCTTGCATTTCCATGGGTCG Ppil2 mmu-miR-615 237 262 uUCUCCC-UCU---GGGUCCGAGCCU |||||| || |:: |||| ||| cAGAGGGCTGACAGCTTTGGCTAGGA Ppil2 mmu-miR-615 263 286 uUCUCCCUCUGGGU-C-CGAGCCu | ||||||:|| | | |||| | gACAGGGAGGCCAAGGCGCTCTGt Ppil2 mmu-miR-665 3 27 auUCC--CUGGAGU-CGGAGGACCa ||| |:||||| | |||||| gcAGGCTGGCCTCAGGGATCCTGGc Ppil2 mmu-miR-666 384 403 CCGAGAGUGUCGACACGGGCGA || | :||||||||:|| || GG--CAGGCAGCTGTGTCCTCT Ppil2 mmu-miR-668 174 199 ccaucACCC--GGCUCGGCUCACUGu |||| || ||:| ||||| cacccTGGGAACCTTGCTGTGTGACg Ppil2 mmu-miR-671 409 443 GGAGGUCG--------G---GGAGGUCCCGAAGGa |||||||| | || ||||||||| | CCTCCAGCACAGAGGACAGACCACCAGGGCTTGCa Ppil2 mmu-miR-672 337 358 GUGUGUGUCAUGU-GGUUGGAgu |||| :|| |:|| :||:||| CACA-GCACTGCAGTCAGCCTtg Ppil2 mmu-miR-673 175 196 gaGGUUCCUGGUCUCGACACuc || :||| | |||||| acCCTGGGAACCTTGCTGTGtg Ppil2 mmu-miR-675-5p 343 375 UGACACCCG--GGAA--A------GGC-GUGGu |||| | | |||| | ||| |||| ACTGCAGTCAGCCTTGCTCAGCAGCCGACACCt Ppil2 mmu-miR-680 579 602 gGGGG--UACAGUC-GUCUACGGg |::| || | | |||||||| tCTTCAAATACCTGACAGATGCCa Ppil2 mmu-miR-681 281 302 ucGACGGACGGUCGCUC---CGAC |||::|||: |||| |||| ctCTGTTTGCT--CGAGCTTGCTG Ppil2 mmu-miR-682 106 135 GUCU--GAAGUGA----CA-CU--GACGUC | || |||::|| || || |||||| CTGATCCTTTGCTCCTAGTGGATGCTGCAG Ppil2 mmu-miR-683 230 254 cUCCUGUGU----CGAAUGUCGucc | | |||| ||| ||||| cACGCCACAGAGGGCTGACAGCttt Ppil2 mmu-miR-684 542 562 aaCUG--AACUUCCCUUUUga ||| ||||:||||||| agGACTTTTGAGGGGAAAAaa Ppil2 mmu-miR-687 184 208 aGUAACGACGUA-AG--GUCCUauc | ||||||::| | ||||| aCCTTGCTGTGTGACGACAGGAgct Ppil2 mmu-miR-689 66 99 CCUGGGG----CGG----C-----UCGCCCcugc ||||||| ||| | |||||| GGACCCCAGAAGCCCTCGGTTCTCAGCGGGctct Ppil2 mmu-miR-693-3p 227 247 aaUGU-CGGUGUAGACUUUCGACg ||| |||||| ||::|||| agACACGCCACA---GAGGGCTGa Ppil2 mmu-miR-700 74 95 ccaccuGAGCCAAGGG-CGCac ||||||||:| ||| gaagccCTCGGTTCTCAGCGgg Ppil2 mmu-miR-701 77 99 aGGUAGAUAA-AGUCG-CCGAuu || || :|| ||||| |||| gCCCTCGGTTCTCAGCGGGCTct Ppil2 mmu-miR-705 158 177 acGGGUGGGGUGGAGGGUGG ||||||:| | |||||| ccCCCACCTCCACCCCCACC Ppil2 mmu-miR-705 208 227 acggguggggUGGAGGGUGg ||||||||| tttattttatACCTCCCACa Ppil2 mmu-miR-709 395 413 aggAGGACGGAGAC-GGAGG |||| |: ||| ||||| gtgTCCT-CTCCTGTCCTCC Ppil2 mmu-miR-711 314 337 GAAU--GUAGAGAGGGGCCCAGGG |||: | ||| |: :||||:|| CTTGGTGAACTCCCTGTGGGTTCC Ppil2 mmu-miR-711 286 307 gAAUGUAGAGAGGG-GCCCAGGg ||:| || |:: | ||||| tTTGC-TCGAGCTTGCTGGTCCt Ppil2 mmu-miR-712* 132 153 guuguggGCCCCCACUGAGCGu || |||:||||| gcaggaaCGAACGTGGCTCGCc Ppil2 mmu-miR-717 268 291 uCUC---UUCCAUAGAGACAGACuc ||| |||| : ||||||:|| gGAGGCCAAGGCG-CTCTGTTTGct Ppil2 mmu-miR-718 368 392 GCUGUGGGCCGG---CCCG-CCUUC |||||||:| || |||| || || CGACACCTGTCCCCAGGGCAGGCAG Ppil2 mmu-miR-743 37 58 aGAUGA-GUCGAACCACAGaaa ||||| || ||||||| gCTACTACAAGGTGGTGTCaga Ppil2 mmu-miR-759 265 286 caguuuuaacaaaCGUGAGACg ||:||||| cagggaggccaagGCGCTCTGt Ppil2 mmu-miR-761 286 312 ACAC-AG-UC-AAAG--UGGGACGACg | || || || || | ::||||||| TTTGCTCGAGCTTGCTGGTCCTGCTGt Ppil2 mmu-miR-761 343 362 acACAGUCAAAGU-GGGACGAcg || ||| ||| ||:|||| acTG-CAG--TCAGCCTTGCTca Ppil2 mmu-miR-762 280 307 CGAGACA---GGGC-CGG--GGUCGGGg ||||||| |:|| ||: |::|:|| GCTCTGTTTGCTCGAGCTTGCTGGTCCt Ppil2 mmu-miR-763 340 367 cgGUGAC--CA---AGAA-GGGUCGACc ||||| || ||| |:|||| | agCACTGCAGTCAGCCTTGCTCAGCAGc Ppil2 mmu-miR-770-3p 319 340 ggUCGAGGUGCAGUCCGGGUGc | |||| :|| :| :|||| tgAACTCCCTGTGGGTTCCACa Ppil2 mmu-miR-801 329 351 CAGCUAAGGCGUGCGUGUCGUUAG || |:|||| || |||| |||:|| GTGGGTTCCACA-GCACTGCAGTC Ppil2 mmu-miR-9* 450 472 ugaaAGCCAAUAG--AUCGAAau ||||||:|| |||||| tgggTCGGTTGTCTATAGCTTaa Ppil2 mmu-miR-93 323 348 GAUGGACGUGC---UUGUCGUGAaac || ||||:: | |||||||| CTCCCTGTGGGTTCCACAGCACTgca Ppil2 mmu-miR-99a 73 96 UGUUC--UAGCC--UAGAUGCCCa | ||| |||| || :|||| AGAAGCCCTCGGTTCTCAGCGGGc

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ppil2 RAID00163605 mmu-miR-883a-5p miRNA MIMAT0004848 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID00525456 mmu-miR-202-3p miRNA MIMAT0000235 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID00569429 mmu-miR-376c-3p miRNA MIMAT0003183 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID00652821 mmu-miR-761 miRNA MIMAT0003893 Ppil2 mRNA 66053 Prediction 0.2202 Ppil2 RAID00873180 mmu-miR-680 miRNA MIMAT0003457 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01214601 mmu-miR-299a-3p miRNA MIMAT0004577 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01349675 mmu-miR-7006-5p miRNA MIMAT0027916 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01359293 mmu-miR-431-5p miRNA MIMAT0001418 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01375296 mmu-miR-339-5p miRNA MIMAT0000584 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01556655 mmu-miR-103-3p miRNA MIMAT0000546 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01730369 mmu-miR-5107-5p miRNA MIMAT0020615 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01849709 mmu-miR-7021-3p miRNA MIMAT0027947 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01879426 mmu-miR-6354 miRNA MIMAT0025097 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID01908074 mmu-miR-551b-3p miRNA MIMAT0003890 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02079600 mmu-miR-302b-3p miRNA MIMAT0003374 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02082852 mmu-miR-300-5p miRNA MIMAT0004578 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02268373 mmu-miR-125a-5p miRNA MIMAT0000135 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02274855 mmu-miR-7682-3p miRNA MIMAT0029885 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02290373 mmu-miR-203-3p miRNA MIMAT0000236 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02330396 mmu-miR-183-5p miRNA MIMAT0000212 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02470449 mmu-miR-22-3p miRNA MIMAT0000531 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02485354 mmu-miR-140-5p miRNA MIMAT0000151 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02534848 mmu-miR-351-5p miRNA MIMAT0000609 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02653062 mmu-miR-383-5p miRNA MIMAT0000748 Ppil2 mRNA 66053 Prediction 0.2202 Ppil2 RAID02664714 mmu-miR-214-3p miRNA MIMAT0000661 Ppil2 mRNA 66053 Prediction 0.2202 Ppil2 RAID02713157 mmu-miR-295-3p miRNA MIMAT0000373 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02718445 mmu-miR-875-5p miRNA MIMAT0004937 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02837984 mmu-miR-302a-3p miRNA MIMAT0000380 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID02839319 mmu-miR-107-3p miRNA MIMAT0000647 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03184771 mmu-miR-6991-3p miRNA MIMAT0027885 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03186938 mmu-miR-6931-5p miRNA MIMAT0027762 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03211198 mmu-miR-92a-2-5p miRNA MIMAT0004635 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03223363 mmu-miR-3087-5p miRNA MIMAT0014895 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03262894 mmu-miR-302d-3p miRNA MIMAT0003377 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03331155 mmu-miR-290a-5p miRNA MIMAT0000366 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03405788 mmu-miR-155-5p miRNA MIMAT0000165 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03442956 mmu-miR-3090-3p miRNA MIMAT0014902 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03681405 mmu-miR-370-3p miRNA MIMAT0001095 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID03770108 mmu-miR-876-3p miRNA MIMAT0004855 Ppil2 mRNA 66053 Prediction 0.1828 Ppil2 RAID04056881 mmu-miR-125b-5p miRNA MIMAT0000136 Ppil2 mRNA 66053 Prediction 0.1828