DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Gnb3 | mmu-miR-1928 | beg:413 | end:424 | pic:3' CTCGACCGTTACATCGA 5'& |||||||| &5' --------AATGTAGC- 3' |
Gnb3 | mmu-miR-370 | beg:29 | end:47 | pic:3' TGGTCCAAGGTGGGGTCGTCCG 5'& ||||||. |||||||| &5' ---AGGTTCT----CAGCAGGC 3' |
Gnb3 | mmu-miR-707 | beg:315 | end:333 | pic:3' GCATCCGT-TCGCCGTACTGAC 5'& || ||| ||||||| &5' -----GCTCAGCC-CATGACT- 3' |
Gnb3 | mmu-miR-331-3p | beg:84 | end:96 | pic:3' AAGATCCTATCCGGGTCCCCG 5'& .|||||||| &5' ------------TCCAGGGGC 3' |
Gnb3 | mmu-miR-483 | beg:46 | end:65 | pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& .||| || | ||||||| &5' --TCCTCCTATGC-CCCGTCT- 3' |
Gnb3 | mmu-miR-665 | beg:259 | end:277 | pic:3' TCCCTGGAG-TC-GGAGGACCA 5'& ||| || |||||||| &5' -----CCTAGAGTCCTCCTGG- 3' |
Gnb3 | mmu-miR-186star | beg:55 | end:74 | pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& |||. || ||||||||. &5' CCCG------TCTCCTTAGGGT 3' |
Gnb3 | mmu-miR-345-5p | beg:63 | end:78 | pic:3' TTCGTGACCTGATCCCCAGTCG 5'& || |||||||. &5' ----------CTTAGGGTCAGT 3' |
Gnb3 | mcmv-miR-m01-1 | beg:364 | end:383 | pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& || || |||||||.| &5' -----CGCCGCT-TTCTCCTTT 3' |
Gnb3 | mcmv-miR-m108-2-3p | beg:57 | end:76 | pic:3' TGGCCAGTGAGCAGAG----CTCAGTG 5'& |||||| |.|||| &5' ----------CGTCTCCTTAGGGTCA- 3' |
Gnb3 | mcmv-miR-m22-1 | beg:287 | end:308 | pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& ||||. || | ||.|||||| &5' --GCCTTTGTCCAGATGGGGAA 3' |
Gnb3 | mcmv-miR-M23-2 | beg:245 | end:260 | pic:3' GGCGAACTGGCTCCGGGGGTA 5'& |||| .||||| &5' ------GACCCCT-TCCCCA- 3' |
Gnb3 | mmu-let-7b | beg:210 | end:235 | pic:3' TTGGT-GTGTTGGATGATGGAGT 5'& |.|| ||||.||| || |||.| &5' AGCCCTCACAGCCT-CTCCCTTA 3' |
Gnb3 | mmu-miR-1188 | beg:349 | end:371 | pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||||||.. |.|| |.|| &5' TCCTGGCTTC-CTTCCCGCC- 3' |
Gnb3 | mmu-miR-122 | beg:73 | end:91 | pic:3' GTTTGTGGTAACAG----TGTGAGGT 5'& ||| |.|||||| &5' -----------GTCTCCTATACTCCA 3' |
Gnb3 | mmu-miR-1224 | beg:199 | end:222 | pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| .|||| ||| |||||| &5' CTCC-TCTCCACAGCCCTCAC 3' |
Gnb3 | mmu-miR-125a-3p | beg:30 | end:54 | pic:3' CCGAGGGTTCTTGGAGT-GGACA 5'& ||.||.||. |. ||| ||| &5' GGTTCTCAGCAGGCTCCTCCT-- 3' |
Gnb3 | mmu-miR-125a-5p | beg:148 | end:164 | pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||| ||||||| &5' ---------GAAGCA--TCAGGGA 3' |
Gnb3 | mmu-miR-125b-5p | beg:145 | end:164 | pic:3' AGTGTTCAATCCCAG-AGTCCCT 5'& ||.| ||||||| &5' -------TTGGAAGCATCAGGGA 3' |
Gnb3 | mmu-miR-127star | beg:261 | end:286 | pic:3' TAGTCTCGGGA-GACTCGAA-GTC 5'& .||||.||| |||.|.| ||| &5' --TAGAGTCCTCCTGGGTTACCAG 3' |
Gnb3 | mmu-miR-130bstar | beg:0 | end:18 | pic:3' TCATCACGTTGTCCCTTTCTCA 5'& || || .|| |.||||| &5' ---AG-GC--TAGAGGAAGAG- 3' |
Gnb3 | mmu-miR-136 | beg:286 | end:306 | pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& || | || ||.||||.| &5' CCTTTGTC----CAGATGGGG- 3' |
Gnb3 | mmu-miR-138star | beg:270 | end:291 | pic:3' GGGACCACAACACTTCATCGGC 5'& ||||| ||| ||||||| &5' -CCTGG-GTTACC-AGTAGCC- 3' |
Gnb3 | mmu-miR-145star | beg:84 | end:95 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||.. &5' -------------TCCAGGGG- 3' |
Gnb3 | mmu-miR-146a | beg:21 | end:41 | pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |.|| ||| .||||||| &5' AGCCAC--GAA---GGTTCTCA 3' |
Gnb3 | mmu-miR-146b | beg:21 | end:41 | pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||| ||| .||||||| &5' AGCCAC--GAA---GGTTCTCA 3' |
Gnb3 | mmu-miR-146bstar | beg:58 | end:74 | pic:3' TGGTCTTGACTCAGGGATCCCG 5'& | |||.|||||. &5' ---------GTCTCCTTAGGGT 3' |
Gnb3 | mmu-miR-181b | beg:320 | end:341 | pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .|||| .||| |||.|||| &5' GCCCA-TGACT---ATGGATGT- 3' |
Gnb3 | mmu-miR-181d | beg:320 | end:341 | pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .|||| .||| |||.|||| &5' GCCCA-TGACT---ATGGATGT- 3' |
Gnb3 | mmu-miR-188-3p | beg:119 | end:132 | pic:3' ACGTTTGGGACGTACACCCTC 5'& ||| |||||| &5' ----------GCAGGTGGGA- 3' |
Gnb3 | mmu-miR-1892 | beg:247 | end:268 | pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& || ||.|||| |||.|.| &5' --CC-CCTTCCCCACCCTAGA- 3' |
Gnb3 | mmu-miR-1896 | beg:143 | end:164 | pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& |||. | ||||||.|| &5' --CCTTTGGAAGCATCAGGGA- 3' |
Gnb3 | mmu-miR-1902 | beg:67 | end:90 | pic:3' TTCAGTACGGATGACGTGGAGA 5'& ..|||| |.|| || .|| | &5' GGGTCA-GTCTCCTATACTCC- 3' |
Gnb3 | mmu-miR-1902 | beg:418 | end:436 | pic:3' TTCAGTACGGATGACGTGGAGA 5'& || ||| |||. |.|||||| &5' -AG-CAT-CCTG--GTACCTCT 3' |
Gnb3 | mmu-miR-1933-5p | beg:311 | end:333 | pic:3' TTTGATTC-TGGCTTGTGGTACTGA 5'& .|| .|. |.| |||||||| &5' -----GAGTGCTCAGC-CCATGACT 3' |
Gnb3 | mmu-miR-1934 | beg:5 | end:32 | pic:3' TCTCCTGCTTCGTCCCCTGGT-CT 5'& |||||| ||.| || .||| || &5' AGAGGAAGAGGTGGGAAGCCACGA 3' |
Gnb3 | mmu-miR-1935 | beg:279 | end:297 | pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& || .|||||.||.| &5' ------CCAGTAGCCTTTGTC- 3' |
Gnb3 | mmu-miR-193b | beg:67 | end:78 | pic:3' TCGCCCTGAAACACCCGGTCAA 5'& |||.|||| &5' -------------GGGTCAGT- 3' |
Gnb3 | mmu-miR-1953 | beg:365 | end:379 | pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| .|||||.| &5' -----GCC-----GCTTTCTC- 3' |
Gnb3 | mmu-miR-1962 | beg:205 | end:229 | pic:3' TACACAGG-GTCACG---GTCGGAGA 5'& ||| ||| |||||||| &5' -----TCCACAGCCCTCACAGCCTCT 3' |
Gnb3 | mmu-miR-196a | beg:405 | end:430 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& ||.||.|| ||| |.| |||. &5' CCTAATAAAATGTAGCATCCTG 3' |
Gnb3 | mmu-miR-1982.1 | beg:6 | end:24 | pic:3' GACACCCTCTTGTATC-CCACTCT 5'& |||.| || ||||.|| &5' ------GAGGA---AGAGGTGGGA 3' |
Gnb3 | mmu-miR-1983 | beg:120 | end:131 | pic:3' TCTTTTGTACGAGGTCCACTC 5'& ||||||.| &5' -------------CAGGTGGG 3' |
Gnb3 | mmu-miR-206 | beg:363 | end:386 | pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& ||.| |.|||.|| |||. &5' CCGC-CGCTTTCTCCTTTTCT- 3' |
Gnb3 | mmu-miR-2140 | beg:22 | end:43 | pic:3' TGGTGGTTCTAGACGTGGA 5'& .|||| |||.|. || | &5' GCCACGAAGGTTCTCAGC- 3' |
Gnb3 | mmu-miR-216a | beg:120 | end:135 | pic:3' AGTGTCAACGGTCGACTCTAAT 5'& ||| ||.||||| &5' ----------CAGGTGGGATTA 3' |
Gnb3 | mmu-miR-221 | beg:404 | end:424 | pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& |||.| .| |||||||| &5' ---ACCTAATAA--AATGTAGC- 3' |
Gnb3 | mmu-miR-222 | beg:332 | end:345 | pic:3' TGGGTCATCGGTCTACATCGA 5'& .|||||.||| &5' -----------GGATGTGGCT 3' |
Gnb3 | mmu-miR-222 | beg:404 | end:424 | pic:3' TGGGTCATCGGTCTACATCGA 5'& |||.| || ||||||| &5' ACCTAATAAA---ATGTAGC- 3' |
Gnb3 | mmu-miR-291b-3p | beg:232 | end:256 | pic:3' TGTTTG-TTTTACCTACGTGAAA 5'& |.|||| |.|||||| | ||| &5' ATAAACAAGAATGGACCC-CTT- 3' |
Gnb3 | mmu-miR-296-3p | beg:201 | end:220 | pic:3' CCTCTCGGAGGTGG-GTTGGGAG 5'& ||||. || ||.||||| &5' ------CCTCT-CCACAGCCCTC 3' |
Gnb3 | mmu-miR-339-3p | beg:301 | end:323 | pic:3' GCCGAGACAGCGGCTC-CGCGAGT 5'& || || ||| || |.||||| &5' -GGAA-TG--GCC-AGAGTGCTCA 3' |
Gnb3 | mmu-miR-3473 | beg:383 | end:403 | pic:3' CCGACTCGGT------AGAGAGGT 5'& ||| ||||||. &5' ------GCCCTTTTGTTCTCTCT- 3' |
Gnb3 | mmu-miR-3473 | beg:189 | end:212 | pic:3' CCGAC-TCGGTA--GAGAGGT 5'& || .||| ||||||| &5' -GCCATGGCCTCTCCTCTCCA 3' |
Gnb3 | mmu-miR-351 | beg:144 | end:164 | pic:3' GTCCGAGTTTCC--CGAGGAGTCCCT 5'& ||. || || ||||||| &5' ----CTTT--GGAAGCA--TCAGGGA 3' |
Gnb3 | mmu-miR-351 | beg:58 | end:73 | pic:3' GTCCGAGTTTCCC-GAGGAGTCCCT 5'& | |||||.|||| &5' ------------GTCTCCTTAGGG- 3' |
Gnb3 | mmu-miR-412 | beg:117 | end:131 | pic:3' GCCGATCACCTGGTCCACTT 5'& || ||||||.. &5' ---------GAGCAGGTGGG 3' |
Gnb3 | mmu-miR-423-5p | beg:211 | end:230 | pic:3' TTTCAGAGCGAGAGA--CGGGGAGT 5'& || ||| |||.||| &5' --------GCCCTCACAGCCTCTC- 3' |
Gnb3 | mmu-miR-432 | beg:73 | end:94 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |.| || |||||||.|. &5' --GTCTCCTA---TACTCCAGGG 3' |
Gnb3 | mmu-miR-469 | beg:0 | end:20 | pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& ||| .|. ||| |.||||||. &5' GGAGGCT-AGA-----GGAAGAGGT- 3' |
Gnb3 | mmu-miR-488 | beg:97 | end:120 | pic:3' CTGGTTC-TTTGTCGGAAAGTT 5'& || || |||| |||||.|| &5' --CCTAGTAAACTTCCTTTTAA 3' |
Gnb3 | mmu-miR-491 | beg:191 | end:213 | pic:3' GGAGTACCTTCCCA-AGGGGTGA 5'& ||||| ||.|||| &5' ---CATGGCCTCTCCTCTCCAC- 3' |
Gnb3 | mmu-miR-491 | beg:242 | end:262 | pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& ||||| |||||||| &5' ----ATGGACCCCTTCCCCAC- 3' |
Gnb3 | mmu-miR-496 | beg:302 | end:323 | pic:3' CTCTAACCGGTACATTATGAGT 5'& |.|| |||||| |.|.|||| &5' GGGAATGGCCAG--AGTGCTCA 3' |
Gnb3 | mmu-miR-665 | beg:338 | end:358 | pic:3' TCCCTGGAGTCGGAGGACCA 5'& || ||| ||.||||||| &5' -GGCTCCT-AGTCTCCTGG- 3' |
Gnb3 | mmu-miR-670 | beg:142 | end:164 | pic:3' AAGTGGTGTATG-TG-AGTCCCTA 5'& .|| .| ||||||| &5' ---GCCTTTGGAAGCATCAGGGA- 3' |
Gnb3 | mmu-miR-671-5p | beg:343 | end:364 | pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& |.||.|.| |. |||||||| &5' --CTAGTCTC-CT--GGCTTCCT 3' |
Gnb3 | mmu-miR-676 | beg:150 | end:173 | pic:3' TCG-AGTTGTTGGAGTCCTGCC 5'& ||| |||. .||.| |||.| &5' AGCATCAGGGACTTAAGGGC-- 3' |
Gnb3 | mmu-miR-693-5p | beg:326 | end:345 | pic:3' CTTTTGAAAGCCTACACCGAC 5'& .||| .|||||||||| &5' ---GACTA-TGGATGTGGCT- 3' |
Gnb3 | mmu-miR-708 | beg:34 | end:51 | pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.|||| |.|||||| &5' CTCAGC--------AGGCTCCT- 3' |
Gnb3 | mmu-miR-708 | beg:328 | end:348 | pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.| |.|| ||| .|||||| &5' -CTA--TGGA-TGT-GGCTCCT- 3' |
Gnb3 | mmu-miR-744 | beg:42 | end:63 | pic:3' ACGACAATCGGGAT-CGGGGCGT 5'& ||| .|||| ||||||. &5' -GCTCC---TCCTATGCCCCGT- 3' |
Gnb3 | mmu-miR-760 | beg:252 | end:271 | pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||||||| ||.||||.| &5' TCCCCAC---CCTAGAGTC- 3' |
Gnb3 | mmu-miR-764-3p | beg:188 | end:204 | pic:3' TGTCAACGGTGATACCGGAGGA 5'& ||||| |||||||. &5' -----TGCCA---TGGCCTCT- 3' |
Gnb3 | mmu-miR-872 | beg:270 | end:293 | pic:3' GGACTTGATTGTTCATTGGAA 5'& |||| .| || ||||.|||| &5' CCTGGGTT-ACCAGTAGCCTT 3' |
Gnb3 | mmu-miR-882 | beg:382 | end:404 | pic:3' TGATTACGCGATT--GAGAGAGGA 5'& ||| || .||||||.| &5' -----TGCCCTTTTGTTCTCTCTT 3' |
Gnb3 | mmu-miR-883a-5p | beg:22 | end:44 | pic:3' CATTGACGATGAA---GAGAGTCGT 5'& || || .|||||||| &5' ------GCCACGAAGGTTCTCAGCA 3' |
Gnb3 | mmu-miR-92astar | beg:241 | end:263 | pic:3' CATTAC--GGTGGTTAGGGGTGGA 5'& |||| || || |||||||| &5' --AATGGACC-CCT-TCCCCACC- 3' |
Gnb3 | mmu-miR-93star | beg:27 | end:45 | pic:3' GCCCTTCACGATCGAGTCGTCA 5'& |||| |.| |||||||| &5' ---GAAG-GTT--CTCAGCAG- 3' |
Gnb3 | mmu-miR-133astar | beg:269 | end:287 | pic:3' TAAACCAAGGTAA-AATGGTCG 5'& ||| |||||||. &5' -------TCCTGGGTTACCAGT 3' |