DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Mark2 ATTTA 446-2677 3845-3849;3997-4001 Coordinated posttranscriptional mRNA population dynamics during#Mol Syst Biol 2009; 5: 288.!Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Mark2 WWATTTAWW 446-2677 3843-3851 Coordinated posttranscriptional mRNA population dynamics during#Mol Syst Biol 2009; 5: 288.!Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Mark2 WWWATTTAWWW 446-2677 3842-3852 Coordinated posttranscriptional mRNA population dynamics during#Mol Syst Biol 2009; 5: 288.!Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.!

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT011586 mmu-miR-15a-5p Mus musculus Mark2 13728 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT576999 mmu-miR-1186b Mus musculus Mark2 13728 Mus musculus HITS-CLIP Functional MTI (Weak) 26203562

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0003473 mmu-miR-133a* 13728 Mark2 uaaaccaAGGUAAAAUGGUcg |:: | |||||| aagaaaaUUUUUAUUACCAaa 3 15 314 334 [mm9:19:7351246-7351266:-] 0.6700 126 0 -5.35 -0.4415 MIMAT0004534 mmu-miR-145* 13728 Mark2 guucuugucauaAAGGUCCUUa ||||||||| uugagucuugggUUCCAGGAAc 2 11 1413 1434 [mm9:19:7350146-7350167:-] 0.5547 150 7 -15.43 -0.1906 MIMAT0004538 mmu-miR-10b* 13728 Mark2 auaaggggaucuuagCUUAGAc |||||| uaaagagaauguuugGAAUCUg 2 8 1672 1693 [mm9:19:7349887-7349908:-] 0.6187 120 6 -11.87 -0.2192 MIMAT0004572 mmu-miR-290-3p 13728 Mark2 cccgaauuuuGAUCCGCCGUGAAa || | :||||||| ugugucucccCU-GCUGGCACUUg 2 15 95 117 [mm9:19:7351463-7351485:-] 0.5626 144 7 -12.68 -0.1527 MIMAT0000370 mmu-miR-292-3p 13728 Mark2 ugugaguuuuGGACCGCCGUGAAa |||| :||||||| gugugucuccCCUGCUGGCACUUg 2 15 94 117 [mm9:19:7351463-7351486:-] 0.5626 158 7 -22.10 -0.1512 MIMAT0004583 mmu-miR-130b* 13728 Mark2 ucaucacguugucccUUUCUCa |||||| gaucaaauacguaauAAAGAGa 2 8 1658 1679 [mm9:19:7349901-7349922:-] 0.6379 120 6 -7.24 -0.1649 MIMAT0004622 mmu-let-7c-1* 13728 Mark2 ccuuucgaucuucCAACAUGUc |||||||| ugcccucaccugaGUUGUACAu 2 10 1228 1249 [mm9:19:7350331-7350352:-] 0.6160 145 7 -9.49 -0.4066 MIMAT0004628 mmu-miR-21* 13728 Mark2 cuGUCGGGU-AGCUGACGACAAc :| :::| |: |||||||| cuUAAUUUAUUUCUCUGCUGUUu 2 21 1164 1186 [mm9:19:7350394-7350416:-] 0.6496 147 7 -14.45 -0.5047 MIMAT0004635 mmu-miR-92a* 13728 Mark2 cauuacGGUGGUUAGGGGUGGa || |: ||||||| ccuagcCCCCUUCCCCCCACCc 2 17 1616 1637 [mm9:19:7349943-7349964:-] 0.6379 144 7 -23.38 -0.1882 MIMAT0004647 mmu-miR-338-5p 13728 Mark2 gugagucgugguccuAUAACAa |||||| uuuuauuuuuauuauUAUUGUu 2 8 1270 1291 [mm9:19:7350289-7350310:-] 0.5443 120 6 -7.50 -0.1258 MIMAT0000605 mmu-miR-350 13728 Mark2 cuUUCACA--UACCCGAAACACUu |: ||| || :||||||| ugAGUUGUACAUUUUUUUUGUGAu 2 21 1238 1261 [mm9:19:7350319-7350342:-] 0.6160 147 7 -11.11 -0.7890 MIMAT0000650 mmu-miR-17* 13728 Mark2 gauguucacgggagUGACGUCa ||||||| ucccccugggagaaACUGCAGg 2 9 64 85 [mm9:19:7351495-7351516:-] 0.4533 140 7 -16.40 -0.1127 MIMAT0004665 mmu-miR-218-1* 13728 Mark2 ccacgaacugccuuGGUACAAa ||||||| ucaguuuuuuucuuCCAUGUUu 2 9 136 157 [mm9:19:7351423-7351444:-] 0.5809 140 7 -11.99 -0.5192 MIMAT0004670 mmu-miR-7a* 13728 Mark2 auaccgucuGACACUAAACAAc :| | :|||||| uugguuuuuUUUUUGUUUGUUu 2 14 1295 1316 [mm9:19:7350264-7350285:-] 0.5443 129 6 -6.74 -0.1194 MIMAT0000744 mmu-miR-380-5p 13728 Mark2 gcguacaaGAUACC-AGU-UGGUa |||||| ||| |||| uccacuggCUAUGGCUCAGACCAa 2 15 1464 1487 [mm9:19:7350093-7350116:-] 0.5761 125 0 -16.82 -0.1042 MIMAT0003409 mmu-miR-467a 13728 Mark2 gcguauauGUACGUCCGUGAAu | ||| ||||||| gugucuccCCUGCUGGCACUUg 2 15 96 117 [mm9:19:7351463-7351484:-] 0.5626 154 7 -16.96 -0.1527 MIMAT0002111 mmu-miR-470 13728 Mark2 ugaguggucacggucaGGUUCUu |||||| gaguauuucgccuaaaCCAAGAa 2 8 296 318 [mm9:19:7351262-7351284:-] 0.6700 120 6 -15.31 -0.3091 MIMAT0004760 mmu-miR-470* 13728 Mark2 agaagagucuuucCAUGACCAa |||||||| caggcuaaacccaGUACUGGUa 2 10 763 784 [mm9:19:7350796-7350817:-] 0.5997 145 7 -13.43 -0.1750 MIMAT0003173 mmu-miR-547 13728 Mark2 gagugaguuucuacAUGGUUc |||||| aagaaaauuuuuauUACCAAa 2 8 314 334 [mm9:19:7351246-7351266:-] 0.6700 120 6 -4.71 -0.5077 MIMAT0003186 mmu-miR-369-3p 13728 Mark2 uuucuaguugguacAUAAUAa |||||| uuauuuuuuauuuuUAUUAUu 2 8 1265 1285 [mm9:19:7350295-7350315:-] 0.5802 120 6 -3.58 -0.1785 MIMAT0004788 mmu-miR-20b* 13728 Mark2 gaucuucacgagUGUGACGUCa | ||||||| ucccccugggagAAACUGCAGg 2 11 64 85 [mm9:19:7351495-7351516:-] 0.4533 142 7 -18.55 -0.1127 MIMAT0003190 mmu-miR-291b-3p 13728 Mark2 uguuuguuuuaccuACGUGAAa ||||||| ccuuccccccacccUGCACUUa 2 9 1624 1645 [mm9:19:7349935-7349956:-] 0.6379 140 7 -7.18 -0.3320 MIMAT0003892 mmu-miR-762 13728 Mark2 cgagacagggccGGGGUCGGGg |:||||||| ccaaccucaaccCUCCAGCCCg 2 11 1439 1460 [mm9:19:7350120-7350141:-] 0.5652 146 7 -23.30 -0.1305 MIMAT0003735 mmu-miR-672 13728 Mark2 aguGUGUGUCAUGUGGUUGGAGu || : | ::|||||||| uucCAGGAACCUUGCCAACCUCa 2 21 1425 1447 [mm9:19:7350133-7350155:-] 0.5652 148 7 -19.48 -0.1718 MIMAT0003895 mmu-miR-764-3p 13728 Mark2 ugucaACGGUGAUACCGGAGGa ||:| | | ||||||| gagacUGUC-C-AGGGCCUCCa 2 18 992 1011 [mm9:19:7350569-7350588:-] 0.6198 145 7 -18.87 -0.1096 MIMAT0004825 mmu-miR-423-5p 13728 Mark2 uuucagagcgaGAGACGGGGAGu | | ||||||| uugucugaaagCACAGCCCCUCa 2 13 869 891 [mm9:19:7350689-7350711:-] 0.5782 144 7 -20.80 -0.4760 MIMAT0003471 mmu-miR-692 13728 Mark2 cucacuccgcgaGUUUCUCUa :||||||| ucaaauacguaaUAAAGAGAa 2 10 1660 1680 [mm9:19:7349900-7349920:-] 0.6379 141 7 -11.46 -1.2223 MIMAT0005448 mmu-miR-467b 13728 Mark2 guauauguacgucCGUGAAUg ||||||| uuccccccacccuGCACUUAg 2 9 1626 1646 [mm9:19:7349934-7349954:-] 0.6379 140 7 -9.16 -0.4119 MIMAT0003488 mmu-miR-698 13728 Mark2 ucccuuccuuugCUCUUAc |||||| auacguaauaaaGAGAAUg 2 8 1664 1682 [mm9:19:7349898-7349916:-] 0.6379 120 6 -9.47 -0.1015 MIMAT0003495 mmu-miR-705 13728 Mark2 acGGGUGGGGUGGAGGGUGg ::| :|:| |||||||| ggUUCUUCUC-CCUCCCACa 2 19 174 192 [mm9:19:7351388-7351406:-] 0.5722 152 7 -28.00 -0.3242 MIMAT0003495 mmu-miR-705 13728 Mark2 acGGGUGGGGUGGA-GGGUGg |:: :||| :|| ||||| ggCUUCUCCCCUCUCCCCACu 2 19 502 522 [mm9:19:7351058-7351078:-] 0.6197 122 0 -25.76 -0.2187 MIMAT0003496 mmu-miR-706 13728 Mark2 aaaaaacucUGUCCCAAAGAGa || ||||||| ccacccugcACUUAGUUUCUCc 2 14 1632 1653 [mm9:19:7349927-7349948:-] 0.6379 141 7 -8.38 -0.6568 MIMAT0003499 mmu-miR-709 13728 Mark2 aggagGACGGAGAC-GGAGg ||||| ||| |||| agaggCUGCCCCUGCCCUCa 2 15 1216 1235 [mm9:19:7350345-7350364:-] 0.6160 126 0 -22.87 -0.1158 MIMAT0003510 mmu-miR-717 13728 Mark2 ucucuUCCAUAGAGACAGACUc :|| :|||:||||||| guucuGGGAGUCUUUGUCUGAa 2 18 856 877 [mm9:19:7350703-7350724:-] 0.5782 165 7 -20.93 -0.3472 MIMAT0004850 mmu-miR-883b-5p 13728 Mark2 acuGACGAUGGGUAAGAGUCAu :| | : || |||||||| cccUUCCAGGCCCUUCUCAGUu 2 20 120 141 [mm9:19:7351439-7351460:-] 0.5717 155 7 -18.56 -0.4790 MIMAT0004890 mmu-miR-509-5p 13728 Mark2 uaCUAACGGUGUAAGA-CCUCAu | || |: |:|||| ||||| caGCUU-CUCCGUUCUGGGAGUc 2 21 846 867 [mm9:19:7350713-7350734:-] 0.5782 126 0 -16.32 -0.1127 MIMAT0004892 mmu-miR-568 13728 Mark2 cacACAUAUG-UAAAUA-UGUa ||| | : |||||| ||| guuUGUUUUUGAUUUAUGACAa 2 18 1309 1330 [mm9:19:7350250-7350271:-] 0.5443 120 0 -6.37 -0.8353 MIMAT0005830 mmu-miR-466l 13728 Mark2 uuAUACACACGUACA-UAAAUAu | ||| ||: | | |||||| uuUUUGUUUGUUUUUGAUUUAUg 2 21 1304 1326 [mm9:19:7350254-7350276:-] 0.5443 128 6 -7.64 -0.7337 MIMAT0007868 mmu-miR-1903 13728 Mark2 acagaguccUUCUUCUUCUUCc || ||||| ||| uuauuaccaAAAAAGAAAAAGa 2 14 324 345 [mm9:19:7351235-7351256:-] 0.6330 125 0 -6.38 -0.1238 MIMAT0007870 mmu-miR-1900 13728 Mark2 acUUCCUGGUCUCUCCCGCCGg |||| |::|| ||||||| ggAAGG-CUGGAUUGGGCGGCa 2 21 1024 1044 [mm9:19:7350536-7350556:-] 0.5698 162 7 -32.26 -0.1432 MIMAT0009399 mmu-miR-1935 13728 Mark2 ucucuAGGCGGUCGGAG-ACGGa ||| |: |||| |||| gcuccUCCUCUCCCCUCUUGCCc 2 18 1490 1512 [mm9:19:7350068-7350090:-] 0.5870 121 0 -17.61 -0.1241 MIMAT0009403 mmu-miR-1939 13728 Mark2 cacguaaccgucCCUUAGcu |||||| aagagaauguuuGGAAUCug 3 9 1674 1693 [mm9:19:7349887-7349906:-] 0.6187 120 0 -9.70 -0.1752 MIMAT0009408 mmu-miR-1943 13728 Mark2 agGUCCACGG-GUCUAGGAGGGAa ||| ||| | |||||||| ccCAGCGGCCACCUUUCCUCCCUg 2 22 359 382 [mm9:19:7351198-7351221:-] 0.6079 156 7 -28.33 -0.1983 MIMAT0009408 mmu-miR-1943 13728 Mark2 aggUCC-ACGGGUCUAGGAG-GGAa ||| ||||| : |||| ||| cagAGGCUGCCCCUGCCCUCACCUg 2 21 1215 1239 [mm9:19:7350341-7350365:-] 0.6160 127 0 -24.41 -0.2422 MIMAT0009409 mmu-miR-1944 13728 Mark2 uuAGUCUUGAACUGUAAGUCGUGUCUc ||:| ||| :|: |: ||||||| ccUCGGUACU--GCGGUU-GCACAGAg 2 26 275 298 [mm9:19:7351282-7351305:-] 0.6290 156 7 -23.01 -0.7111 MIMAT0009423 mmu-miR-1952 13728 Mark2 gucUUCCUCCCACCUCu ||| : ||||||| ggcAAGAGUGGUGGAGu 2 15 453 469 [mm9:19:7351111-7351127:-] 0.6197 150 7 -18.67 -0.2359 MIMAT0009459 mmu-miR-1982* 13728 Mark2 ggagggguccuGGGAGGGUu |||||||| gugguucuucuCCCUCCCAc 2 10 172 191 [mm9:19:7351389-7351408:-] 0.5722 145 7 -23.04 -0.1872 MIMAT0011210 mmu-miR-2134 13728 Mark2 cgugGGGCAAAGGGUUCUg |::| |||||||| auggCUUGGCUCCCAAGAu 2 16 1552 1570 [mm9:19:7350010-7350028:-] 0.5961 151 7 -20.32 -0.1308 MIMAT0011210 mmu-miR-2134 13728 Mark2 cguggggcaaagGGUUCUg |||||| auuucgccuaaaCCAAGAa 2 8 300 318 [mm9:19:7351262-7351280:-] 0.6700 120 6 -16.02 -0.3014 MIMAT0011221 mmu-miR-2145 13728 Mark2 uugguccGGGCUGGGACGa ||| ||||||| cccuuccCCCCACCCUGCa 2 13 1623 1641 [mm9:19:7349939-7349957:-] 0.6379 152 7 -20.50 -0.3355 MIMAT0013803 mmu-miR-2861 13728 Mark2 ggCGGGCGGCGGUCCGGGg |:|| |: |||||||| uuGUCCCCUUCCAGGCCCu 2 18 115 133 [mm9:19:7351447-7351465:-] 0.5626 161 7 -29.79 -0.2436 MIMAT0014853 mmu-miR-3072 13728 Mark2 ucUUCCGAAGGACCUCCC-CCGu ::|||| |: |||||| ||| guGGGGCUCCUGGGAGGGUGGCu 2 21 411 433 [mm9:19:7351147-7351169:-] 0.6197 136 0 -31.40 -0.1729 MIMAT0004528 mmu-miR-125a-3p 13728 Mark2 ccGAGGGUUCUUGGAGUGGACa || || : ||||||||| ggCUGCCCCUGCCCUCACCUGa 2 21 1219 1240 [mm9:19:7350340-7350361:-] 0.6160 156 7 -30.50 -0.2553 MIMAT0000142 mmu-miR-9 13728 Mark2 aguaUGUCGAUCUAUUGGUUUcu | | :| || |||||| aagaAAAUUUUUAUUACCAAAaa 3 20 314 336 [mm9:19:7351244-7351266:-] 0.6330 131 0 -4.65 -0.2583 MIMAT0000158 mmu-miR-146a 13728 Mark2 uugGGUACCUUAAGUC-AAGAGu || || | || || ||||| ccaCCCUGCACUU-AGUUUCUCc 2 20 1632 1653 [mm9:19:7349927-7349948:-] 0.6379 121 0 -14.17 -0.6059 MIMAT0000158 mmu-miR-146a 13728 Mark2 uuggGUACCUUAAGUC-AAGAGu || ||:| ||| ||||| ggaaCA-GGGACACAGCUUCUCc 2 19 834 855 [mm9:19:7350725-7350746:-] 0.5782 120 0 -14.82 -0.1442 MIMAT0000209 mmu-miR-129-5p 13728 Mark2 cguucgggucuggcGUUUUUc |||||| aaaauuuuuauuacCAAAAAa 2 8 317 337 [mm9:19:7351243-7351263:-] 0.6330 120 6 -3.75 -0.2776 MIMAT0000212 mmu-miR-183 13728 Mark2 ucaCUUAAGAUGGUCACGGUAu ||| ||| ||||||| ucaGAAGUCU----GUGCCAUc 2 20 739 756 [mm9:19:7350824-7350841:-] 0.6212 146 7 -13.05 -0.2003 MIMAT0000223 mmu-miR-193 13728 Mark2 ugacccuGAAACAUCCGGUCAa || || |||||||| ugcuaacCUCUG-AGGCCAGUg 2 16 1095 1115 [mm9:19:7350465-7350485:-] 0.5698 153 7 -17.01 -0.1743 MIMAT0000247 mmu-miR-143 13728 Mark2 cuCGAUGUCACGAAGUAGAGu || || || | ||||||| ggGC-ACCGUUC-UCAUCUCa 2 20 930 948 [mm9:19:7350632-7350650:-] 0.6697 151 7 -18.07 -0.4079 MIMAT0004576 mmu-miR-296-3p 13728 Mark2 ccUCUCGGA--GGU--GGGUUGGGAg :|| ||| ||| |:||||||| caGGAACCUUGCCAACCUCAACCCUc 2 21 1428 1453 [mm9:19:7350127-7350152:-] 0.5652 158 7 -28.17 -0.1407 MIMAT0004577 mmu-miR-299 13728 Mark2 uuCGCCA--AA-UGGCAGGGUGUAu |:||| || || |||||||| aaGUGGUUCUUCUCCCUCCCACAUu 2 21 170 194 [mm9:19:7351386-7351410:-] 0.5722 158 7 -26.17 -0.1480 MIMAT0000663 mmu-miR-218 13728 Mark2 uguACCAAUCUAGUUCGUGUu | || || ||||||| ucuUUGUCUGA--AAGCACAg 2 19 866 884 [mm9:19:7350696-7350714:-] 0.5782 143 7 -10.59 -0.1113 MIMAT0000677 mmu-miR-7a 13728 Mark2 uguUGUUUUAGUGAUCA-GAAGGu || | ||| : || ||||| cacACCAUAUCCUCUGUCCUUCCc 2 21 663 686 [mm9:19:7350894-7350917:-] 0.6212 120 0 -12.99 -0.1180 MIMAT0000678 mmu-miR-7b 13728 Mark2 uguUGUUUUAGUGUUCA-GAAGGu || | ||| : || ||||| cacACCAUAUCCUCUGUCCUUCCc 2 21 663 686 [mm9:19:7350894-7350917:-] 0.6212 120 0 -11.54 -0.1180 MIMAT0000741 mmu-miR-377 13728 Mark2 uguuuucaaCGGAAACACACUa ||| ||||||| accucugagGCCAGUGUGUGAa 2 14 1100 1121 [mm9:19:7350459-7350480:-] 0.5698 149 7 -15.54 -0.1987 MIMAT0001095 mmu-miR-370 13728 Mark2 uggucCAAGGU-GGGGU-CGUCCg || ||| |::|| ||||| agucuGUGCCAUCUUCAGGCAGGc 2 18 744 767 [mm9:19:7350813-7350836:-] 0.5997 124 0 -23.04 -0.2055 MIMAT0003168 mmu-miR-543 13728 Mark2 uucuucacguggCGCUUACAAa | ||||||| auacguaauaaaGAGAAUGUUu 2 11 1664 1685 [mm9:19:7349895-7349916:-] 0.6379 142 7 -8.82 -0.5278 MIMAT0003169 mmu-miR-539 13728 Mark2 ugugugguuccuAUUAAAGAGg | ||||||| gcaucccuuaauUUAUUUCUCu 2 11 1158 1179 [mm9:19:7350401-7350422:-] 0.6832 142 7 -12.93 -0.9743 MIMAT0003727 mmu-miR-374 13728 Mark2 gugaaucguccAACAUAAUAua || |||||| uuauuuuuuauUUUUAUUAUua 3 12 1265 1286 [mm9:19:7350294-7350315:-] 0.5802 127 0 -2.19 -0.2459 MIMAT0003456 mmu-miR-495 13728 Mark2 uucuucacgugguACAAACAAa |||||||| uugguuuuuuuuuUGUUUGUUu 2 10 1295 1316 [mm9:19:7350264-7350285:-] 0.5443 145 7 -8.23 -1.1636 MIMAT0003486 mmu-miR-491 13728 Mark2 ggaguaccuucccaAGGGGUGa ||||||| gggcuucuccccucUCCCCACu 2 9 501 522 [mm9:19:7351058-7351079:-] 0.6197 140 7 -20.45 -0.2747 MIMAT0004859 mmu-miR-193b 13728 Mark2 ucgcccuGAAACACCCGGUCAa || || ||||||| ugcuaacCUCUG-AGGCCAGUg 2 16 1095 1115 [mm9:19:7350465-7350485:-] 0.5698 145 7 -14.09 -0.1743 MIMAT0004896 mmu-miR-590-3p 13728 Mark2 ugAUCGAAUAUG--UAUUUUAAu | || || || | |||||| uuUCGCCUAAACCAAGAAAAUUu 2 20 301 323 [mm9:19:7351257-7351279:-] 0.6700 126 6 -2.09 -0.1436 MIMAT0005850 mmu-miR-1192 13728 Mark2 uuAAACC---AGACAAACAAACAAa ||||| |:| |||||||||| guUUUGGUUUUUUUUUUGUUUGUUu 2 21 1292 1316 [mm9:19:7350264-7350288:-] 0.5443 171 7 -17.88 -1.1598

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G037819 Mark2 Mus musculus 13728 19536157 0 0 R48719; MOUSE$MARK2_01; Binding factors: mmu-let-7a-5p , mmu-let-7b-5p , mmu-let-7c-5p , mmu-let-7e-5p , mmu-let-7f-5p , mmu-let-7g-5p , mmu-let-7i-5p , mmu-miR-672-5p , mmu-miR-98-5p // 0 0 R48729; MOUSE$MARK2_02; Binding factors: mmu-miR-138-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Mark2 mmu-miR-692 beg:1664 end:1680 pic:3' CTCACTCCGCGA-GTTTCTCTA 5'& ||. .||||||| &5' --------CGTAATAAAGAGA- 3' Mark2 mmu-miR-218 beg:868 end:885 pic:3' TGTACCAATCTAGTTCGTGTT 5'& || || |||||||. &5' -----GTCTGA--AAGCACAG 3' Mark2 mmu-miR-129-3p beg:1474 end:1493 pic:3' TACGAAAAACCCCATTCCCGAA 5'& ||| ||||||| &5' --GCTCAGACC---AAGGGCT- 3' Mark2 mmu-miR-2136 beg:1582 end:1596 pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& ||| .|||||||| &5' -------CAG--GACACCCAG 3' Mark2 mmu-miR-10a beg:1062 end:1076 pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& || |||||||. &5' ------------TCCACAGGGTG 3' Mark2 mmu-miR-10b beg:1062 end:1076 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& || |||||||. &5' ------------TCCACAGGGTG 3' Mark2 mmu-miR-2145 beg:45 end:63 pic:3' TTGGTCCGGGCTGGGACGA 5'& . |||| ||||||| &5' --TTGGGCCA-ACCCTGC- 3' Mark2 mmu-miR-3072 beg:1524 end:1543 pic:3' TCTTCCGA-AGGACCTCCCCCGT 5'& .||. ||| ||||||| &5' ---GGGTGCTCCA--AGGGGGC- 3' Mark2 mmu-miR-3072 beg:237 end:255 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& .||||| ||||||||| &5' GGAAGG------GGAGGGGGC- 3' Mark2 mmu-miR-3072 beg:812 end:829 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& || || |||||||| &5' -----GCCCCC---AGGGGGCA 3' Mark2 mmu-miR-539 beg:1160 end:1180 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& || |||||||. &5' -----CCTTAATTTATTTCTCT 3' Mark2 mmu-miR-296-3p beg:1435 end:1454 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& ||| | |.|||||||| &5' -----GCCAAC-CTCAACCCTC 3' Mark2 mmu-miR-296-3p beg:44 end:61 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& ||. . |||||||| &5' -------CTTGGGCCAACCCT- 3' Mark2 mmu-miR-1927 beg:539 end:554 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||| |||||||| &5' -----CCCA-----CCAGAGGT- 3' Mark2 mmu-miR-2861 beg:477 end:497 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |||| |||||||||||. &5' --GCCCTCCGCCAGGCCCT 3' Mark2 mghv-miR-M1-7-5p beg:356 end:375 pic:3' TCCAATGGCGTGGA-GGTGGAAA 5'& || || | |||||||| &5' ------CC-CAGCGGCCACCTTT 3' Mark2 mmu-miR-2134 beg:1553 end:1571 pic:3' CGTGGGGCAAAGGGTTCTG 5'& |..| ||||||||. &5' ----CTTGGCTCCCAAGAT 3' Mark2 mmu-miR-326 beg:682 end:692 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& ||||||| &5' -------------CCCAGAG- 3' Mark2 mmu-miR-3475 beg:1438 end:1457 pic:3' AAGTTTGGTACACGGAGGTCT 5'& | |||| ||||||| &5' --CCAACCTCAACCCTCCAG- 3' Mark2 mmu-miR-125a-5p beg:420 end:439 pic:3' AGTGTCCAATTTCCCA--GAGTCCCT 5'& ..||||| ||||||| &5' ---------GGAGGGTGGCTCAGGG- 3' Mark2 mmu-miR-432 beg:1519 end:1539 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |||| |.| .|||||||. &5' --GCCCG--GGT--GCTCCAAGG 3' Mark2 mmu-miR-705 beg:184 end:205 pic:3' ACGGGTG-GGGTGGAGGGTGG 5'& ||||| ..|||| || || &5' --CCCACATTCACC-CCTGCC 3' Mark2 mmu-miR-1958 beg:360 end:378 pic:3' TGAATGACGAAGGT-GAAAGGAT 5'& || ||| ||||||| &5' -------GCGGCCACCTTTCCT- 3' Mark2 mmu-miR-105 beg:105 end:118 pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& ||| ||||||| &5' -----------CTG-GCACTTG- 3' Mark2 mcmv-miR-M23-2 beg:553 end:571 pic:3' GGCGAACTGGCTC----CGGGGGTA 5'& |.|| ||||||| &5' ------GGCCTTCCCCTGCCCCCA- 3' Mark2 mmu-miR-423-5p beg:975 end:985 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||||||| &5' ---------------GCCCCTC- 3' Mark2 mmu-miR-467a beg:103 end:118 pic:3' GCGTATATGTACGTCCGTGAAT 5'& ||| |||||||. &5' ----------TGCTGGCACTTG 3' Mark2 mmu-miR-290-3p beg:104 end:117 pic:3' CCCGAATTTTGATCCG-CCGTGAAA 5'& || ||||||| &5' --------------GCTGGCACTT- 3' Mark2 mmu-miR-292-3p beg:684 end:702 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& ||.|.|. ||||||| &5' -----CAGAGCTG---GGCACTT- 3' Mark2 mmu-miR-764-3p beg:994 end:1011 pic:3' TGTCAACGGTGATACCGGAGGA 5'& ||.| | ||||||| &5' -----TGTC-CAG-GGCCTCC- 3' Mark2 mcmv-miR-M87-1 beg:1002 end:1021 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||| || |.|||||||| &5' ---GCCT---CC-ATGGCTGCCT 3' Mark2 mmu-miR-1900 beg:1025 end:1044 pic:3' ACTTCCTGGTCTCTCCCGCCGG 5'& |||| | || ||||||| &5' --AAGG-CTGGATTGGGCGGC- 3' Mark2 mmu-miR-1952 beg:455 end:469 pic:3' GTCTTCCTC-CCACCTCT 5'& ||| ||||||| &5' ------GAGTGGTGGAG- 3' Mark2 mmu-miR-362-3p beg:84 end:100 pic:3' ACTTAGGAACTTGTCCACACAA 5'& ||||. ||||||| &5' --------TGAATTGGTGTGT- 3' Mark2 mmu-miR-378star beg:0 end:15 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& |||| |. |||||||| &5' ---CAGG-CT----GTCAGGAG 3' Mark2 mcmv-miR-m01-1 beg:361 end:379 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& ||.| |.||||| &5' -----CGGCCACC-TTTCCTC- 3' Mark2 mcmv-miR-m01-1 beg:166 end:184 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& || || .||||.||| &5' ------GAAGTGGTTCTTCTC- 3' Mark2 mcmv-miR-m21-1 beg:1365 end:1376 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||||||.| &5' -------------TCCCCTGT 3' Mark2 mcmv-miR-m21-1 beg:548 end:566 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||. .| ||||||. &5' -GGTG---GCCT-TCCCCTG- 3' Mark2 mcmv-miR-m21-1 beg:894 end:903 pic:3' GCCGAACTTGCACAGGGGATA 5'& |||||| &5' --------------CCCCTA- 3' Mark2 mcmv-miR-m22-1 beg:1188 end:1208 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& | ||.| | .|||||| &5' -GTTCTTGAGAAAT-TGGGGAA 3' Mark2 mcmv-miR-M23-1-3p beg:67 end:87 pic:3' CCGGAGCCCGGCT---GCGTCCTC 5'& ||| ||| || .|||||| &5' --CCT-GGGA-GAAACTGCAGGA- 3' Mark2 mcmv-miR-M23-2 beg:1435 end:1455 pic:3' GGCGAACTGGCTCC-GGGGGTA 5'& .|| ||| ||.||| &5' -TGCCA-ACCTCAACCCTCCA- 3' Mark2 mcmv-miR-M23-2 beg:1217 end:1236 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& ||| .|| ||||.|| &5' --GCT--GCCCCTGCCCTCA- 3' Mark2 mghv-miR-M1-3 beg:927 end:948 pic:3' TTCGCGTTGAGGAC-GAGTGGAG 5'& | ||| || ||||.||| &5' --GGGCA---CCGTTCTCATCTC 3' Mark2 mghv-miR-M1-6 beg:124 end:144 pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& |..|| |.|| ||||||. &5' -AGGCC-CTTCT--CAGTTTT- 3' Mark2 mghv-miR-M1-8 beg:1439 end:1465 pic:3' CTGGT-TTGGG-GGTCACTCACGA 5'& ||| ||||| |||| ||||| &5' -ACCTCAACCCTCCAGCCCGTGCT 3' Mark2 mmu-let-7a beg:896 end:910 pic:3' TTGATATGTTGGATGATGGAGT 5'& ||||||.|.|| &5' ----------CCTACTGCTTC- 3' Mark2 mmu-let-7b beg:888 end:910 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& |||| | ||||||.|.|| &5' -ACCATCCC-CCTACTGCTTC- 3' Mark2 mmu-let-7c-1star beg:1238 end:1249 pic:3' CCTTTCGATCTTCCAACATGTC 5'& |||||||| &5' -------------GTTGTACA- 3' Mark2 mmu-let-7e beg:687 end:708 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||. .| ||.|||| || &5' AGCTGGGC-ACTTCCTTCC--- 3' Mark2 mmu-miR-105 beg:1124 end:1142 pic:3' TGGTGTTCGTAGAC--TCGTGAACC 5'& |. ||| .||.||||| &5' -------GTGGCTGTAGGCGCTTGG 3' Mark2 mmu-miR-1186 beg:759 end:781 pic:3' GTACGGAA-ATTAAGGTCGTGAG 5'& || ||| ||||.||| &5' ---GCAGGCTAAACCCAGTACT- 3' Mark2 mmu-miR-1188 beg:648 end:670 pic:3' AGGACCGGGTTGGA-GTGTGGT 5'& ||||||.| ||| ||||||| &5' -CCTGGCTC--CCTCCACACCA 3' Mark2 mmu-miR-1192 beg:1291 end:1317 pic:3' TTAAACCAGAC---AAACAAACAAA 5'& ||||||.| ||||||||||| &5' --TTTGGTTTTTTTTTTGTTTGTTT 3' Mark2 mmu-miR-1193 beg:546 end:559 pic:3' CTATCATTTTGC-CCACTGGAT 5'& | ||||.||| &5' -----------GAGGTGGCCT- 3' Mark2 mmu-miR-1196 beg:778 end:797 pic:3' TCCGTCT-CCGTCCATCTAAA 5'& ||.||| || ||| .|| &5' -GGTAGAGGGGAGG-GGA--- 3' Mark2 mmu-miR-1198 beg:1571 end:1593 pic:3' GGTTCGG---TCGGTCCTTGTGTAT 5'& ..|.| .|||||| |||| &5' --GGGTCCGGGGCCAGG-ACAC--- 3' Mark2 mmu-miR-1199 beg:1462 end:1484 pic:3' GGCGCGCTGGCCCTGAGTCT 5'& || | .|.|. |.|||||| &5' CCAC-TGGCTATGGCTCAGA 3' Mark2 mmu-miR-122 beg:437 end:451 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& || ||||||. &5' ----------TGGAACACTCT- 3' Mark2 mmu-miR-1224 beg:1488 end:1507 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| ||||.|| |||| &5' CTCCTCCTCTCC---CCTC-- 3' Mark2 mmu-miR-1224 beg:504 end:529 pic:3' GAGGTG-GAGGGGTCAGGAGTG 5'& |||| | ||||||| |.|| | &5' CTCCCCTCTCCCCACTTCTTCC 3' Mark2 mmu-miR-125a-3p beg:1216 end:1240 pic:3' CCGA-GGGTTCTTGGAGTGGACA 5'& |||| ||| | ||||||||| &5' GGCTGCCCCTGC-CCTCACCTG- 3' Mark2 mmu-miR-125b-3p beg:1383 end:1404 pic:3' TCGAGGGTTCTCGGATTGGGCA 5'& .|||||| ||| || .|.| &5' GGCTCCC-AGA-CCAGGCTC-- 3' Mark2 mmu-miR-125b-5p beg:419 end:439 pic:3' AGTGTTCAATCCCA--GAGTCCCT 5'& | ||||| ||||||| &5' ------GGGAGGGTGGCTCAGGG- 3' Mark2 mmu-miR-1274a beg:22 end:44 pic:3' ACCGCGGACTTGTC-CCTGGACT 5'& ||| || ||| ||||.||. &5' -GGC-CCAC--CAGTGGACTTGG 3' Mark2 mmu-miR-133b beg:1524 end:1545 pic:3' ATCGACCAAC---TTCCCCTGGTTT 5'& ||| ||||||.|||. &5' -----GGTGCTCCAAGGGGGCCAG- 3' Mark2 mmu-miR-139-5p beg:704 end:720 pic:3' GACCTCTGTGCACG-TGACATCT 5'& ||.| || .||||.| &5' -------CATGAGCTGCTGTGG- 3' Mark2 mmu-miR-139-5p beg:1116 end:1136 pic:3' GAC-CTCTGTGCACGTGACATCT 5'& | || |.. ||| .||||||. &5' --GTGA-ATGGGTG-GCTGTAGG 3' Mark2 mmu-miR-141star beg:146 end:168 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& |||| .||. ||..|||| &5' TCCATGTTTGT---GGGGGATG 3' Mark2 mmu-miR-143 beg:927 end:949 pic:3' CTCGATGTCACGAAGTAGAGT 5'& |.|| || || | |||||||| &5' GGGC-ACCGTTC-TCATCTCA 3' Mark2 mmu-miR-145 beg:423 end:444 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& |||| |. || .||||| &5' AGGGTGGCTCAGG---GCTGGA- 3' Mark2 mmu-miR-145 beg:676 end:698 pic:3' TCCCTAAGGACCC--TTTTGACCTG 5'& |||| |.|.||||.| &5' ------TCCTTCCCCAGAGCTGGGC 3' Mark2 mmu-miR-145star beg:1412 end:1434 pic:3' GTTCTT-GTCATAAAGGTCCTTA 5'& .|| ..| ||||||||| &5' -GAGTCTTGGG--TTCCAGGAA- 3' Mark2 mmu-miR-145star beg:1038 end:1056 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ..||| ||||||.| &5' ----GGCAGGG---CCAGGAGT 3' Mark2 mmu-miR-146a beg:1173 end:1195 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |.| |||||||||. &5' --CTCTGCTGTTTCAGTTCTT- 3' Mark2 mmu-miR-146a beg:924 end:944 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& .| |||. | ||||||| &5' ---TC-TGGGCA-CCGTTCTCA 3' Mark2 mmu-miR-146b beg:1177 end:1195 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& ||. |||||||||. &5' -GCTGT-----TTCAGTTCTT- 3' Mark2 mmu-miR-146b beg:125 end:145 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& .||| ||||||.|. &5' GGCCCTTC----TCAGTTTTT- 3' Mark2 mmu-miR-146b beg:926 end:944 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||. | ||||||| &5' ------TGGGCA-CCGTTCTCA 3' Mark2 mmu-miR-150 beg:774 end:797 pic:3' GTGACCATGTTCCCAACCCTCT 5'& .||||||| |.||| |||| &5' TACTGGTAGAGGGGAGGGGA-- 3' Mark2 mmu-miR-150star beg:113 end:140 pic:3' GATAGGG---GGTCCGGACATGGTC 5'& |.|||| ||||||| .||| &5' -TGTCCCCTTCCAGGCCCTTCTCAG 3' Mark2 mmu-miR-155 beg:906 end:927 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& ||||| || | ||.||||||| &5' -CCCCT-TC-C--TTGGCATTAA 3' Mark2 mmu-miR-184 beg:664 end:682 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& || |||| |||.|||| &5' --CCATATC----CTCTGTCC- 3' Mark2 mmu-miR-188-3p beg:146 end:165 pic:3' ACGTTTGGG-ACGTACACCCTC 5'& .|| ||. ||||||.| &5' ------TCCATGTTTGTGGGGG 3' Mark2 mmu-miR-188-3p beg:710 end:723 pic:3' ACGTTTGGGACGTACACCCTC 5'& |||| ||||||. &5' --------CTGC-TGTGGGG- 3' Mark2 mmu-miR-188-3p beg:393 end:416 pic:3' ACGTTTGGGACGT--ACACCCTC 5'& |. || ||| | ||||||. &5' -GTCAAGACTGGATCTGTGGGG- 3' Mark2 mmu-miR-1892 beg:1356 end:1382 pic:3' TAG-GAGGGAGGG--CAGG-GGTTTA 5'& .|| ||||||||| |||| .|| &5' GTCACTCCCTCCCCTGTCCATCA--- 3' Mark2 mmu-miR-1893 beg:1449 end:1465 pic:3' GCTCCGCAGGTCGCGGGCGCGG 5'& |||| |||||.||. &5' -------TCCA--GCCCGTGCT 3' Mark2 mmu-miR-1894-3p beg:895 end:920 pic:3' GAGGGAAGT----GGGAGAGGGAACG 5'& |||| | ||| ||.||||| &5' --CCCTACTGCTTCCC-CTTCCTTG- 3' Mark2 mmu-miR-1894-5p beg:240 end:265 pic:3' TCTCCGTCCACC-ATCCCCTCTC 5'& ||.|| .|| || |.||||.|.| &5' AGGGGAGGG-GGCTGGGGGGGGG 3' Mark2 mmu-miR-1894-5p beg:228 end:252 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& .|||||| || |||||||.| &5' GGAGGCAAA-GGAAGGGGAGGG 3' Mark2 mmu-miR-1902 beg:688 end:703 pic:3' TTCAGTACGGATGACGTGGAGA 5'& ||. ||||.|| &5' -------GCTGG--GCACTTC- 3' Mark2 mmu-miR-1906 beg:698 end:720 pic:3' TCGGGACGGAGTCCGACGACGT 5'& .||| || . |||||||. &5' --TCCTTCCATGAGCTGCTGT- 3' Mark2 mmu-miR-1907 beg:1171 end:1187 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& |.||||||||.|. &5' ---------TTCTCTGCTGTTT 3' Mark2 mmu-miR-193 beg:1099 end:1115 pic:3' TGACCCTGAAACATCCGGTCAA 5'& || || |||||||| &5' -------CTCTG-AGGCCAGT- 3' Mark2 mmu-miR-1934 beg:1525 end:1547 pic:3' TCTCCTGCTTCG-TCCCCTGGTCT 5'& || | |||||.||||. &5' ---GGGTGCTCCAAGGGGGCCAGG 3' Mark2 mmu-miR-1937b beg:408 end:426 pic:3' AC-CCCCGAGCAGGCCCTA 5'& | ||||||| |.|||| &5' -GTGGGGCTC--CTGGGA- 3' Mark2 mmu-miR-1937c beg:408 end:426 pic:3' AC-CCCCGAGAAGGCCCTA 5'& | ||||||| |.|||| &5' -GTGGGGCTC--CTGGGA- 3' Mark2 mmu-miR-193b beg:1102 end:1115 pic:3' TCGCCCTGAAACAC-CCGGTCAA 5'& || ||||||| &5' ------------TGAGGCCAGT- 3' Mark2 mmu-miR-1940 beg:1052 end:1069 pic:3' TTGACGAGGTGGAAGAGT-CAGGAGGTA 5'& |||| |||||||| &5' -------------TCTCTTGTCCTCCA- 3' Mark2 mmu-miR-1940 beg:1436 end:1455 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||| |||| |||||| &5' -------CCAAC--CTCAACCCTCCA- 3' Mark2 mmu-miR-1940 beg:509 end:537 pic:3' TTGACGAGGTG-GAAGAGTCA-GGAGGTA 5'& || |||| | |||||. |||.|| &5' --CT-CTCCCCACTTCTTCCCCCCTTCA- 3' Mark2 mmu-miR-1940 beg:120 end:154 pic:3' TTGACGAGGT---GGAAGAGTC------AGGAGGTA 5'& .|||| ||||||||| ||.||||| &5' -----TTCCAGGCCCTTCTCAGTTTTTTTCTTCCAT 3' Mark2 mmu-miR-1943 beg:358 end:382 pic:3' AGGTCCACGGGTCT-AGGAGGGAA 5'& |||| ||| |||||||| &5' -CCAGCGGCCACCTTTCCTCCCT- 3' Mark2 mmu-miR-1943 beg:199 end:221 pic:3' AGGTCCACGGGTCTA---GGAGGGAA 5'& |||||||| |||||||| &5' ------TGCCCAGAAGTCCCTCCCTT 3' Mark2 mmu-miR-1944 beg:276 end:299 pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& ||.| ||| .|. |||||||| &5' --TCGGTACT--GCGGTT-GCACAGAG 3' Mark2 mmu-miR-1948 beg:1610 end:1621 pic:3' GACATGCTCACGAGACGGATTT 5'& |||||||. &5' -------------CTGCCTAG- 3' Mark2 mmu-miR-1948 beg:1014 end:1023 pic:3' GACATGCTCACGAGACGGATTT 5'& ||||||.. &5' -------------CTGCCTGG- 3' Mark2 mmu-miR-195 beg:1168 end:1186 pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||| |||||.| &5' -----TATTTCTCTGCTGTT- 3' Mark2 mmu-miR-1953 beg:358 end:378 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| .||| ||||||. &5' CAGCGGCCAC----CTTTCCT- 3' Mark2 mmu-miR-1956 beg:1174 end:1197 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& ||.|||| .||||..|| || &5' TCTGCTGTTTCAGTTCTTGA-- 3' Mark2 mmu-miR-1959 beg:50 end:69 pic:3' GAGGTGACTCGATGTAGGGG 5'& ||| ||.||||||| &5' --CCAACC--CTGCATCCCC 3' Mark2 mmu-miR-1959 beg:492 end:513 pic:3' GAGGTGACTCGATGTAGGGG 5'& |||. .||.||| | ||||| &5' CTCT-TTGGGCTTC-TCCCC 3' Mark2 mmu-miR-1960 beg:947 end:976 pic:3' TCG----GGAGAAGATTG-TCGTGACC 5'& ||| |||.|||| | .|||.|| &5' AGCCTTGCCTTTTCTTCCTGGCATTG- 3' Mark2 mmu-miR-1960 beg:759 end:783 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .|| || |||.||||| &5' GGCAGGCTAAACCCAGTACTGG 3' Mark2 mmu-miR-1961 beg:892 end:910 pic:3' AAGATTGATGATGGAGT 5'& || |||||.|.|| &5' -TCCCCCTACTGCTTC- 3' Mark2 mmu-miR-1962 beg:934 end:956 pic:3' TACACAGGGTCACG-GTCGGAGA 5'& || ||.|| ||||||. &5' --GT-TCTCATCTCACAGCCTT- 3' Mark2 mmu-miR-196a beg:1604 end:1620 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& ||| | ||.|||| &5' CCCTCC---------CTGCCTA 3' Mark2 mmu-miR-1971 beg:575 end:597 pic:3' AGAGTCGGG----TCGGAAATG 5'& || | |. .|||||||| &5' -CTTGGGCTTACAGGCCTTTAC 3' Mark2 mmu-miR-1982.1 beg:1064 end:1078 pic:3' GACACCCTCTTGTATCCCACTCT 5'& || ||||||.|. &5' -----------CACAGGGTGGGG 3' Mark2 mmu-miR-1982.1 beg:627 end:642 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||| |||||.| &5' -----GGAGA-----GGGTGGG- 3' Mark2 mmu-miR-19a beg:277 end:296 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |.|| |||. ||||||| &5' -CGGTACTGCGG----TTGCACA 3' Mark2 mmu-miR-19b beg:274 end:296 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& ||.|| |||. ||||||| &5' TCGGTACTGCGG----TTGCACA 3' Mark2 mmu-miR-211 beg:230 end:254 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& |||||||||| |. .|.|||. &5' AGGCAAAGGAAGGGGAGGGGG- 3' Mark2 mmu-miR-2134 beg:301 end:318 pic:3' CGTGGGGCAAAGGGTTCTG 5'& |.||. |||||| &5' -CGCCTAAA---CCAAGA- 3' Mark2 mmu-miR-2140 beg:1629 end:1645 pic:3' TGGTGGTTCTAGACGTGGA 5'& ||||| ||||||.| &5' -CCACC-----CTGCACTT 3' Mark2 mmu-miR-2140 beg:49 end:66 pic:3' TGGTGGTTCTAGACGTGGA 5'& .|||| |||||.| &5' ---GCCAACC-CTGCATC- 3' Mark2 mmu-miR-214 beg:91 end:111 pic:3' TGACGGACAGACACGGACGACA 5'& |. ||||| ||||||| &5' ---GTGTGTCTCC-CCTGCTG- 3' Mark2 mmu-miR-2141 beg:687 end:704 pic:3' TTGAAAAGACTGTGGAGGA 5'& |.|| |.|||.|||| &5' AGCTG----GGCACTTCCT 3' Mark2 mmu-miR-2145 beg:1621 end:1641 pic:3' TTGGTCC-GGGCTGGGACGA 5'& || ||| ||||||| &5' --CCTTCCCCCCACCCTGC- 3' Mark2 mmu-miR-2183 beg:627 end:646 pic:3' TC-CTCCAGTCC-CCAAGTT 5'& .| |||| .|| ||| &5' GGAGAGGGTGGGCGGT---- 3' Mark2 mmu-miR-23a beg:1105 end:1121 pic:3' CCTTTAGGGACCGT---TACACTA 5'& ||| .||||| &5' ----------GGCCAGTGTGTGA- 3' Mark2 mmu-miR-27bstar beg:793 end:813 pic:3' CAAGTGGTTAGTCG--ATTCGAGA 5'& ||| .|| |..||||| &5' -------AATGGGCCATGGGCTCT 3' Mark2 mmu-miR-28 beg:1475 end:1496 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||| |||| |.|||||| &5' CTC---AGACCAAGGGCTCCT- 3' Mark2 mmu-miR-2861 beg:1218 end:1239 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|||| |.||| ||. &5' CTGCCC-CTGCCCTCACCT 3' Mark2 mmu-miR-2861 beg:113 end:134 pic:3' GGCGGGCGGC-GGTCCGGGG 5'& .|.|| || ||||||||. &5' -TGTCC-CCTTCCAGGCCCT 3' Mark2 mmu-miR-2861 beg:1610 end:1634 pic:3' GGCGGG-CGGCGGTCC-GGGG 5'& |.|||. ||| || |||| &5' CTGCCTAGCCCCCTTCCCCCC 3' Mark2 mmu-miR-291a-3p beg:103 end:117 pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& || .|||||| &5' ----------TGCTGGCACTT- 3' Mark2 mmu-miR-291b-3p beg:232 end:256 pic:3' TGTTTGTTTTACCTA-CGTGAAA 5'& .|||| .||. ||| | .|| &5' GCAAAGGAAGGGGAGGGGGCT-- 3' Mark2 mmu-miR-292-3p beg:97 end:117 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& ||| |||| .||||||| &5' ---CTCC---CCTGCTGGCACTT- 3' Mark2 mmu-miR-295 beg:95 end:117 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& | ||| |.|||||| &5' -GTCTCCCCTGC--TGGCACTT- 3' Mark2 mmu-miR-298 beg:661 end:681 pic:3' CCCTTCTTGTCGGG--AGGAGACGG 5'& ||| || |||||||.| &5' -------ACA-CCATATCCTCTGTC 3' Mark2 mmu-miR-302a beg:96 end:118 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& || || .| .||||||. &5' TCTCCCCTGCT----GGCACTTG 3' Mark2 mmu-miR-302a beg:1630 end:1646 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& |||| ||||||| &5' -CACCCT---------GCACTTA 3' Mark2 mmu-miR-302b beg:102 end:118 pic:3' GATGATTTTGTACCTTCGTGAAT 5'& ||.|| .||||||. &5' CTGCT----------GGCACTTG 3' Mark2 mmu-miR-302d beg:97 end:118 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& ||| | || .||||||. &5' ---CTCC--CCTGCTGGCACTTG 3' Mark2 mmu-miR-3072 beg:245 end:267 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& ||..|||| ||.||||||| &5' AGGGGGCTG---GGGGGGGGCA 3' Mark2 mmu-miR-3099star beg:237 end:258 pic:3' GTTCCCGACCTTCCTTCGACC 5'& |||| ||.|||..||||| &5' -AAGGAAGGGGAGGGGGCTGG 3' Mark2 mmu-miR-3099star beg:1214 end:1224 pic:3' GTTCCCGACCTTCCTTCGACC 5'& ||.|||| &5' -------------GAGGCTG- 3' Mark2 mmu-miR-31star beg:1537 end:1557 pic:3' CTACCGTTATACAACCGTATCGT 5'& ||| | |||||.|| &5' ---GGCCAG--GAGGGCATGGC- 3' Mark2 mmu-miR-324-3p beg:823 end:843 pic:3' TCGTCGTGGACCCC-GTCACC 5'& .||||| .|||| ||| || &5' GGCAGC--TTGGGAACAG-GG 3' Mark2 mmu-miR-326 beg:420 end:439 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& |||||. |||.|||.| &5' ---GGAGGGT-GGCTCAGGG- 3' Mark2 mmu-miR-327 beg:668 end:685 pic:3' TAGGAGTACGGGGAGTTCA 5'& |||||| ||.||.|| &5' ATCCTC-TGTCCTTC---- 3' Mark2 mmu-miR-327 beg:371 end:393 pic:3' TAGGAGT-ACGGGG-AGTTCA 5'& ||||| |||||| | .| &5' -TCCTCCCTGCCCCATTGGG- 3' Mark2 mmu-miR-327 beg:520 end:539 pic:3' TAGGAGTACGGGGAGTTCA 5'& ||.|| |||.||||| &5' -TCTTCCC-CCCTTCAAG- 3' Mark2 mmu-miR-328 beg:1029 end:1051 pic:3' TGCCTT-CCCGTCTCTCCCGGTC 5'& ||| ||||.| |||||||| &5' --GGATTGGGCGGC-AGGGCCAG 3' Mark2 mmu-miR-328 beg:39 end:56 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| |||||| &5' -------GGCTGCTTGGGCCA- 3' Mark2 mmu-miR-328 beg:1569 end:1588 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |.|||. .||||||| &5' ----AGGGGTCC--GGGGCCAG 3' Mark2 mmu-miR-328 beg:782 end:805 pic:3' TGCCTTCCCGTCTCT--CCCGGTC 5'& ||.||| .|.|| |||||| &5' ---GAGGGGAGGGGAATGGGCCA- 3' Mark2 mmu-miR-329 beg:80 end:100 pic:3' TTTTTCCAATCGACCCACACAA 5'& ||| |. | ||||||| &5' ----AGGATGAATTGGTGTGT- 3' Mark2 mmu-miR-330 beg:670 end:692 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||| | | | ||||||| &5' -CCTCTGTC-CTTCCCCAGAG- 3' Mark2 mmu-miR-335-5p beg:1300 end:1321 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& |||||.|| |||.|.|||| &5' ---TTTTTTGT--TTGTTTTTGA 3' Mark2 mmu-miR-337-3p beg:237 end:257 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||| .||.||||. &5' AGGAAGGGGA-GGGGGCTGG- 3' Mark2 mmu-miR-339-3p beg:1513 end:1534 pic:3' GCCGAGACAGCGGCTCCGCGAGT 5'& || ||| .||.|||| &5' -GGAACA---GCCCGGGTGCTC- 3' Mark2 mmu-miR-339-5p beg:821 end:844 pic:3' GCACTCGA-GGACCTCCTGTCCCT 5'& |.|| |.||| | ||||||| &5' ---GGGCAGCTTGG-GAACAGGGA 3' Mark2 mmu-miR-343 beg:776 end:794 pic:3' AGACCCGTGTACTTCCCTCT 5'& || ||.| ||.|||||. &5' -CT-GGTA---GAGGGGAGG 3' Mark2 mmu-miR-344 beg:1642 end:1663 pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& .|||. || ||.||||| &5' -TAGTTT--CTCCT-CTGGATCA 3' Mark2 mmu-miR-3470b beg:1055 end:1076 pic:3' GGTCGGACCAGA--TGTCTCACT 5'& |.|| || ||||.|||. &5' ----CTTGTCCTCCACAGGGTGG 3' Mark2 mmu-miR-3474 beg:109 end:130 pic:3' CTTAGGTG--CAGAGGAGGGTCCC 5'& ||| ||| |||.||||| &5' -----CACTTGTCCCCTTCCAGG- 3' Mark2 mmu-miR-3475 beg:105 end:130 pic:3' AAGTTTGGT-ACAC--GGAGGTCT 5'& | .| ||| |.|||||. &5' --CTGGCACTTGTCCCCTTCCAGG 3' Mark2 mmu-miR-351 beg:417 end:439 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& || ..||||. ||||||| &5' ----CTGGGAGGGTGGCTCAGGG- 3' Mark2 mmu-miR-377 beg:1106 end:1121 pic:3' TGTTTTCAACGGAAACACACTA 5'& ||| ||||||| &5' ---------GCCAGTGTGTGA- 3' Mark2 mmu-miR-382star beg:1103 end:1124 pic:3' TTTTTCACAACAGGCACTTACT 5'& .|| || .|||||||. &5' ---GAGGCCAGTGTGTGAATGG 3' Mark2 mmu-miR-423-5p beg:868 end:892 pic:3' TTTCAGAG---CGAGAGACGGGGAGT 5'& |||| || | |||||||| &5' ---GTCTGAAAGCACA--GCCCCTCA 3' Mark2 mmu-miR-423-5p beg:671 end:685 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||||.||.|| &5' -----------CTCTGTCCTTC- 3' Mark2 mmu-miR-432 beg:511 end:539 pic:3' GACGGGTGACT-AGAT--GAGGTTCT 5'& || |||||| || ||.|||| &5' CTCCCCACTTCTTCCCCCCTTCAAG- 3' Mark2 mmu-miR-466i beg:1109 end:1134 pic:3' ATCACACA--TACACACACACATA 5'& ||||||| ||| ||| |||| &5' -AGTGTGTGAATGGGTGGCTGTA- 3' Mark2 mmu-miR-484 beg:418 end:444 pic:3' TAGCCCTCCC-CTGA--CTCGGACT 5'& .||||||| |.|| |.||. || &5' --TGGGAGGGTGGCTCAGGGCTGGA 3' Mark2 mmu-miR-485 beg:938 end:956 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& ||||| | ||||||. &5' ----TCATCTCA--CAGCCTT- 3' Mark2 mmu-miR-486 beg:68 end:87 pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& ||| || | |.||||| &5' ----GGG-AGAA-ACTGCAGGA 3' Mark2 mmu-miR-488 beg:308 end:327 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||||||||| .|||.| &5' -ACCAAGAAAA---TTTTTA- 3' Mark2 mmu-miR-491 beg:508 end:523 pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& |||| |||||||| &5' CCTC----------TCCCCACT 3' Mark2 mmu-miR-491 beg:414 end:436 pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& ||| |||.||||| |.|| &5' -CTCCTGGGAGGGTGGCTCA-- 3' Mark2 mmu-miR-493 beg:541 end:561 pic:3' GGACCGTGTGTCATC-CTGGAAGT 5'& ||| ||| .| |.||||| &5' -----CAC-CAGAGGTGGCCTTC- 3' Mark2 mmu-miR-503 beg:1171 end:1186 pic:3' GACGTCATGACAAG-GGCGACGAT 5'& ||| |.||||.| &5' -----------TTCTCTGCTGTT- 3' Mark2 mmu-miR-539 beg:1636 end:1654 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|||. ||.||||||| &5' --GCACT-----TAGTTTCTCC 3' Mark2 mmu-miR-541 beg:196 end:216 pic:3' TCACACTGGTTGTAGTC-TTAGGGAA 5'& || .| ||| |.||||| &5' -------CCTGCC-CAGAAGTCCCT- 3' Mark2 mmu-miR-542-3p beg:1343 end:1364 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||||.||. ||||||| &5' ---CAGTTGTCGTCCTGTCAC- 3' Mark2 mmu-miR-543 beg:1665 end:1686 pic:3' TTCTTCACGTGG---CGCTTACAAA 5'& |.| | |||||||| &5' -------GTAATAAAGAGAATGTTT 3' Mark2 mmu-miR-544 beg:72 end:88 pic:3' CTCGAACGATTTTTACGTCTTA 5'& .||| |||||.|| &5' ---------GAAACTGCAGGAT 3' Mark2 mmu-miR-615-3p beg:419 end:444 pic:3' TTCTCCCTCTGGGT-CCGAGCCT 5'& ..||||| |.|.|| |||| ||| &5' GGGAGGGTGGCTCAGGGCT-GGA 3' Mark2 mmu-miR-664 beg:1105 end:1127 pic:3' ATCCGACCCCTCATTTACTTAT 5'& |||| | | ||.||||..|. &5' -AGGCCAGTGTGTGAATGGGTG 3' Mark2 mmu-miR-665 beg:953 end:971 pic:3' TCCCTGGAGTCGGAGGACCA 5'& .|||. |.|||||| &5' ----GCCTTTTCTTCCTGG- 3' Mark2 mmu-miR-665 beg:1000 end:1023 pic:3' TCCCTGGAG---TCGGAGGACCA 5'& ||.|||| .||. ||||| &5' --GGGCCTCCATGGCTGCCTGG- 3' Mark2 mmu-miR-667 beg:1135 end:1161 pic:3' GAACCCGAC--CCACCGTCCACAGT 5'& ||| ||||| |||||| || || &5' CTT-GGCTGGTGGTGGCCACTG-CA 3' Mark2 mmu-miR-669a beg:832 end:851 pic:3' TGTACTTGTACGTGTGTGTTGA 5'& ||||| . |||||.|| &5' ----GAACAG--GGACACAGCT 3' Mark2 mmu-miR-671-5p beg:485 end:509 pic:3' GAGGTCGGGGAGGT-CCCGAAGGA 5'& |||| |||||. |||||||. &5' --CCAGGCCCTCTTTGGGCTTCT- 3' Mark2 mmu-miR-673-3p beg:609 end:633 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& || |.|| .| ||||||.||| &5' GGGGTACT--GCACAGCCCTGGA 3' Mark2 mmu-miR-681 beg:1010 end:1033 pic:3' TCGACGGACGGTCGCTCCGAC 5'& .|||||||| |.| |||||| &5' GGCTGCCTGGCGGA-AGGCTG 3' Mark2 mmu-miR-683 beg:9 end:24 pic:3' CTCCTGTGTCGAATGTCGTCC 5'& ||||. .|||||| &5' GAGGG--------GCAGCAG- 3' Mark2 mmu-miR-696 beg:1387 end:1407 pic:3' GGGTGTCGTTCGTGTGCG 5'& |||| | ||.|| || || &5' CCCAGACCAGGCTCA-GC 3' Mark2 mmu-miR-702 beg:621 end:643 pic:3' CTCGCC-CCATTTCCCACCCGT 5'& ||| || |.||||||||| &5' -AGCCCTGG-AGAGGGTGGGC- 3' Mark2 mmu-miR-705 beg:552 end:571 pic:3' ACGGGTGGGG-TGGAGGGTGG 5'& |||. |||| .|| |||| &5' -GCCTTCCCCTGCC-CCCA-- 3' Mark2 mmu-miR-708 beg:1474 end:1496 pic:3' GGGTCGA-TCTAACATTCGAGGAA 5'& .||| ||| ..|||||| &5' ---GGCTCAGACCAAGGGCTCCT- 3' Mark2 mmu-miR-709 beg:1605 end:1626 pic:3' AGGA-GGACGGAGACGGAGG 5'& ||| ||||||| ||| || &5' -CCTCCCTGCCTA-GCCCCC 3' Mark2 mmu-miR-710 beg:25 end:44 pic:3' GAGTTGAGAGG-GGT--TCTGAACC 5'& || ||| .||||||| &5' ---------CCACCAGTGGACTTGG 3' Mark2 mmu-miR-717 beg:858 end:877 pic:3' TCTCTTCCATAGAGACAGACTC 5'& .|| .|||.||||||| &5' -----GGGAGTCTTTGTCTGA- 3' Mark2 mmu-miR-744 beg:1626 end:1642 pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||| |||.||| &5' ---------CCCCCACCCTGCA 3' Mark2 mmu-miR-744 beg:43 end:64 pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||| .||| |||.||| &5' -GCTTG-GGCCAA--CCCTGCA 3' Mark2 mmu-miR-744star beg:9 end:24 pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||| ||||.||| &5' -----GAGG-----GGCAGCAG 3' Mark2 mmu-miR-760 beg:670 end:695 pic:3' AGGGGTGTCT---GGGTCTCGGC 5'& |||.| ||||||||.| &5' TCCTCTGTCCTTCCCCAGAGCTG 3' Mark2 mmu-miR-760 beg:941 end:959 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& .|.||||| ||. ||| &5' -TCTCACAG-CCTT--GCC- 3' Mark2 mmu-miR-761 beg:92 end:111 pic:3' ACACAGTCAAAGTGGGACGACG 5'& |||||| || |||||||| &5' TGTGTC----TC-CCCTGCTG- 3' Mark2 mmu-miR-763 beg:1330 end:1352 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ||||| |||||.|| &5' -CCACTCTTGGC-CCCAGTTG- 3' Mark2 mmu-miR-770-3p beg:13 end:32 pic:3' GGTCGAGGTGCAGTCCGGGTGC 5'& .|| .| |||||||| &5' --GGCA--GCAG-AGGCCCAC- 3' Mark2 mmu-miR-876-5p beg:199 end:214 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& .| ||||.||| &5' ---------GCCCAGAAGTCC- 3' Mark2 mmu-miR-877 beg:659 end:679 pic:3' GGGACGCGGTAGAGGAGATG 5'& || | |||| ||||||. &5' -CCA-CACCATATCCTCTG- 3' Mark2 mmu-miR-877 beg:1633 end:1658 pic:3' GGGACGCGGT----AGAGGAGATG 5'& |||||| |. ||||||||. &5' CCCTGCACTTAGTTTCTCCTCTG- 3' Mark2 mmu-miR-877 beg:883 end:904 pic:3' GGGACGCGGTAGAGGAGATG 5'& |||| | ||||| || |||| &5' CCCT-CACCATCCCC-CTAC 3' Mark2 mmu-miR-877 beg:494 end:514 pic:3' GGGACGCGGTAGAGGAGATG 5'& |..|| ||. ||||| || &5' CTTTGGGCT-TCTCCCCT-- 3' Mark2 mmu-miR-877 beg:743 end:764 pic:3' GGGACGCGGTAGAGGAGATG 5'& .|||.|||||||.| .| &5' -TCTGTGCCATCTTCAG-GC 3' Mark2 mmu-miR-877star beg:1533 end:1553 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||| ||| |.||||.|| &5' ----AGG-GGGCCAGGAGGGCA 3' Mark2 mmu-miR-878-5p beg:389 end:408 pic:3' ACAGAACTGTAGG--TTGATCTAT 5'& |||| .|||.||| &5' ------GACAGTCAAGACTGGAT- 3' Mark2 mmu-miR-879 beg:573 end:595 pic:3' CCGAATCTCGATA-TTCGGAGA 5'& |||.| ||| |.||||.| &5' --CTTGG-GCTTACAGGCCTTT 3' Mark2 mmu-miR-880 beg:447 end:470 pic:3' AGATGAGTC---TCTC-CTACCTCAT 5'& ||||| |||| |.|||||| &5' ----CTCAGGCAAGAGTGGTGGAGT- 3' Mark2 mmu-miR-881star beg:1167 end:1181 pic:3' TCTACACTGACAATAGAGAGAC 5'& ||||.|||||| &5' -----------TTATTTCTCTG 3' Mark2 mmu-miR-882 beg:1635 end:1655 pic:3' TGATTACGCGATTGAGAGAGGA 5'& ||| || | |.|||||| &5' -----TGCACTTAGTTTCTCCT 3' Mark2 mmu-miR-883a-5p beg:798 end:817 pic:3' CATTGACGATGAA-GAGAGTCGT 5'& || |. |||||||| &5' ------GCCATGGGCTCTCAGC- 3' Mark2 mmu-miR-883a-5p beg:1173 end:1191 pic:3' CATTGACGATGAAGAGAGTCGT 5'& || ||.|| |.||||. &5' ----CT-CTGCTG-TTTCAGT- 3' Mark2 mmu-miR-883b-5p beg:126 end:141 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& .||| |||||||| &5' --------GCCC-TTCTCAGT- 3' Mark2 mmu-miR-883b-5p beg:1175 end:1190 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& |||||. |.||||| &5' ---CTGCTG-----TTTCAGT- 3' Mark2 mmu-miR-9 beg:534 end:551 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||| ||||.|| &5' ------AGCGACCC-ACCAGAG- 3' Mark2 mmu-miR-92astar beg:1617 end:1637 pic:3' CATTACGGTGGTTA-GGGGTGGA 5'& ||| || ||||||| &5' -----GCCCCCTTCCCCCCACC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Mark2 RAID00035786 mmu-miR-1231-5p miRNA MIMAT0022357 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00091724 mmu-miR-7002-3p miRNA MIMAT0027907 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00096023 mmu-miR-126b-5p miRNA MIMAT0029894 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00117430 mmu-miR-505-5p miRNA MIMAT0017259 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00133751 mmu-miR-7081-5p miRNA MIMAT0028068 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00133812 mmu-miR-1943-5p miRNA MIMAT0009408 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00141937 mmu-miR-7118-5p miRNA MIMAT0028133 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00154821 mmu-miR-7073-5p miRNA MIMAT0028052 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00163382 mmu-miR-6980-5p miRNA MIMAT0027862 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00214422 mmu-miR-365-3p miRNA MIMAT0000711 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00224229 mmu-miR-5110 miRNA MIMAT0020618 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00226730 mmu-miR-9-5p miRNA MIMAT0000142 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00238430 mmu-miR-6905-5p miRNA MIMAT0027710 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00247424 mmu-miR-6913-5p miRNA MIMAT0027726 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00346858 mmu-miR-146a-5p miRNA MIMAT0000158 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00356842 mmu-miR-218-1-3p miRNA MIMAT0004665 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00361643 mmu-miR-543-3p miRNA MIMAT0003168 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID00390773 mmu-miR-7001-5p miRNA MIMAT0027904 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00400188 mmu-miR-326-3p miRNA MIMAT0000559 Mark2 mRNA 13728 CLIP-seq 0.5483 Mark2 RAID00445384 mmu-miR-299a-3p miRNA MIMAT0004577 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID00486619 mmu-miR-290a-3p miRNA MIMAT0004572 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID00492953 mmu-miR-330-5p miRNA MIMAT0004642 Mark2 mRNA 13728 CLIP-seq 0.5483 Mark2 RAID00495243 mmu-miR-6919-5p miRNA MIMAT0027738 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00500793 mmu-miR-504-3p miRNA MIMAT0017277 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00509485 mmu-miR-7058-5p miRNA MIMAT0028020 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00540419 mmu-miR-3113-3p miRNA MIMAT0014960 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00542970 mmu-miR-6965-5p miRNA MIMAT0027830 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00562525 mmu-miR-346-3p miRNA MIMAT0017039 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00605735 mmu-miR-491-5p miRNA MIMAT0003486 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00616456 mmu-miR-296-3p miRNA MIMAT0004576 Mark2 mRNA 13728 CLIP-seq//Prediction 0.6308 Mark2 RAID00638271 mmu-miR-6418-5p miRNA MIMAT0025173 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00697793 mmu-miR-1192 miRNA MIMAT0005850 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID00701356 mmu-miR-7072-5p miRNA MIMAT0028050 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00750300 mmu-miR-8118 miRNA MIMAT0031424 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00809868 mmu-miR-6978-5p miRNA MIMAT0027858 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00880725 mmu-miR-6951-3p miRNA MIMAT0027803 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00914452 mmu-miR-125a-3p miRNA MIMAT0004528 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00914776 mmu-miR-7235-5p miRNA MIMAT0028438 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID00998133 mmu-miR-2861 miRNA MIMAT0013803 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01001202 mmu-miR-7086-5p miRNA MIMAT0028078 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01023569 mmu-miR-7662-3p miRNA MIMAT0029831 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01023984 mmu-miR-6993-5p miRNA MIMAT0027888 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01031531 mmu-miR-7035-3p miRNA MIMAT0027975 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01109470 mmu-miR-7021-3p miRNA MIMAT0027947 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01142000 mmu-miR-299b-3p miRNA MIMAT0022837 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01182348 mmu-miR-129-2-3p miRNA MIMAT0000544 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01198905 mmu-miR-7005-5p miRNA MIMAT0027914 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01275024 mmu-miR-9769-5p miRNA MIMAT0036461 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01300659 mmu-miR-15a-5p miRNA MIMAT0000526 Mark2 mRNA 13728 NGS (Next Generation Sequencing) 0.5483 Mark2 RAID01306489 mmu-miR-7b-5p miRNA MIMAT0000678 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01321241 mmu-miR-5113 miRNA MIMAT0020621 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01390661 mmu-miR-143-3p miRNA MIMAT0000247 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID01409739 mmu-miR-129-5p miRNA MIMAT0000209 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01445648 mmu-miR-193b-3p miRNA MIMAT0004859 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01474730 mmu-miR-496b miRNA MIMAT0025158 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01482037 mmu-miR-486a-3p miRNA MIMAT0017206 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01483047 mmu-miR-495-3p miRNA MIMAT0003456 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID01485596 mmu-miR-350-3p miRNA MIMAT0000605 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01550344 mmu-miR-7116-3p miRNA MIMAT0028130 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01551422 mmu-miR-8100 miRNA MIMAT0031403 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01558959 mmu-miR-7077-5p miRNA MIMAT0028060 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01580988 mmu-miR-183-5p miRNA MIMAT0000212 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID01651226 mmu-miR-3072-3p miRNA MIMAT0014853 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01652095 mmu-miR-423-5p miRNA MIMAT0004825 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01714310 mmu-miR-8108 miRNA MIMAT0031413 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01724078 mmu-miR-1249-5p miRNA MIMAT0014804 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID01936311 mmu-miR-7069-5p miRNA MIMAT0028044 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02004300 mmu-miR-6909-5p miRNA MIMAT0027718 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02008307 mmu-miR-3154 miRNA MIMAT0035714 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02033501 mmu-miR-7056-5p miRNA MIMAT0028016 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02063499 mmu-miR-6955-5p miRNA MIMAT0027810 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02084508 mmu-miR-467a-5p miRNA MIMAT0003409 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02124802 mmu-miR-292a-3p miRNA MIMAT0000370 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID02145003 mmu-miR-3091-3p miRNA MIMAT0014904 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02168950 mmu-miR-193a-3p miRNA MIMAT0000223 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02175667 mmu-miR-374b-5p miRNA MIMAT0003727 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02207111 mmu-miR-7047-5p miRNA MIMAT0027998 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02286670 mmu-miR-706 miRNA MIMAT0003496 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02307310 mmu-miR-467b-5p miRNA MIMAT0005448 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02517554 mmu-miR-6975-5p miRNA MIMAT0027852 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02522148 mmu-miR-539-5p miRNA MIMAT0003169 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02524461 mmu-miR-6983-5p miRNA MIMAT0027868 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02553606 mmu-miR-883b-5p miRNA MIMAT0004850 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02616078 mmu-miR-7232-5p miRNA MIMAT0028432 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02638382 mmu-miR-155-5p miRNA MIMAT0000165 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02715639 mmu-miR-7215-5p miRNA MIMAT0028398 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02727773 mmu-miR-590-3p miRNA MIMAT0004896 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02754666 mmu-miR-3103-5p miRNA MIMAT0014937 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02852598 mmu-miR-692 miRNA MIMAT0003471 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02885654 mmu-miR-6967-5p miRNA MIMAT0027836 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02945466 mmu-miR-370-3p miRNA MIMAT0001095 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02952934 mmu-miR-218-5p miRNA MIMAT0000663 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02962826 mmu-miR-149-3p miRNA MIMAT0016990 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02977283 mmu-miR-129b-3p miRNA MIMAT0029863 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID02978904 mmu-miR-6954-5p miRNA MIMAT0027808 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03017761 mmu-miR-6990-3p miRNA MIMAT0027883 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03059183 mmu-miR-6929-5p miRNA MIMAT0027758 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03167720 mmu-miR-705 miRNA MIMAT0003495 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03179425 mmu-miR-7016-5p miRNA MIMAT0027936 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03186583 mmu-miR-7008-5p miRNA MIMAT0027920 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03301338 mmu-miR-19b-3p miRNA MIMAT0000513 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03383669 mmu-miR-6922-5p miRNA MIMAT0027744 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03447372 mmu-miR-6900-5p miRNA MIMAT0027700 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03476527 mmu-miR-551b-5p miRNA MIMAT0017236 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03485477 mmu-miR-486b-3p miRNA MIMAT0014944 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03491013 mmu-miR-326-5p miRNA MIMAT0017027 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03492563 mmu-miR-377-3p miRNA MIMAT0000741 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03600977 mmu-miR-7a-5p miRNA MIMAT0000677 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03761061 mmu-miR-7015-5p miRNA MIMAT0027934 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03875946 mmu-miR-21a-3p miRNA MIMAT0004628 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03895923 mmu-miR-6935-5p miRNA MIMAT0027770 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03903500 mmu-miR-6943-5p miRNA MIMAT0027786 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID03959121 mmu-miR-6921-5p miRNA MIMAT0027742 Mark2 mRNA 13728 Prediction 0.2202 Mark2 RAID03991504 mmu-miR-452-3p miRNA MIMAT0017194 Mark2 mRNA 13728 Prediction 0.1828 Mark2 RAID04004615 mmu-miR-7067-5p miRNA MIMAT0028038 Mark2 mRNA 13728 Prediction 0.1828