Aspscr1
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT009832mmu-miR-17-5pMus musculusAspscr168938Mus musculusSequencingFunctional MTI (Weak)19536157
MIRT009096mmu-miR-7b-5pMus musculusAspscr168938Mus musculusSequencingFunctional MTI (Weak)19536157
MIRT007742mmu-miR-301b-3pMus musculusAspscr168938Mus musculusSequencingFunctional MTI (Weak)19536157
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004635mmu-miR-92a*68938Aspscr1cauuacgguGGUUAGGGGUGGa || | ||||||| ccacaggacCCUACCCCCACCc2143253[mm9:11:120570703-120570724:+]0.56811497-20.56-0.1623
MIMAT0003457mmu-miR-68068938Aspscr1gggGGUACAGUCGUCUACGGg ||| | | | ||||||| cuaCCA-GCCUGGAGAUGCCu219423[mm9:11:120570675-120570694:+]0.56811527-19.22-0.5531
MIMAT0000150mmu-miR-13868938Aspscr1gcCGGA---CUAAGUGUUGUGGUCGa |||| ||| | :| ||||||| caGCCUGGAGAUGCCUAUCACCAGCc222833[mm9:11:120570679-120570704:+]0.56811607-22.87-0.3940
MIMAT0001095mmu-miR-37068938Aspscr1ugguccaaGGUGGGG-UCGUCCg ||||||| |||||| acccccacCCACCCCGAGCAGGa2154466[mm9:11:120570715-120570737:+]0.55571346-30.46-0.5828
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G061922Aspscr1Mus musculus68938
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Aspscr1mmu-miR-680beg:4end:24pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||| | |||||||. &5' ---CCAGCCT-GGAGATGCCT 3'
Aspscr1mmu-miR-138beg:17end:33pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& |||| ||||||| &5' --GCCTAT-------CACCAGC- 3'
Aspscr1mcmv-miR-M23-2beg:29end:51pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || | |||| |||||| &5' CCACAGGACCCTA-CCCCCA- 3'
Aspscr1mmu-miR-1904beg:45end:67pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& || ||| || ||||||.| &5' CCACCCACCCC--GAGCAGGA- 3'
Aspscr1mmu-miR-193starbeg:28end:43pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||| |.||||| &5' -------GCCAC--AGGACCC- 3'
Aspscr1mmu-miR-30c-2starbeg:68end:88pic:3' TCTCATTTGTCG-GAAGAGGGTC 5'& ||||| || ||||||.|| &5' AGAGTC----GCGCTTCTCTCA- 3'
Aspscr1mmu-miR-375beg:50end:72pic:3' AGTGC-GCTCGGCTTGCTTGTTT 5'& ||| ||||| |||.||| &5' -CACCCCGAGCAG---GAATAAA 3'
Aspscr1mmu-miR-449cbeg:4end:27pic:3' GGTC-GATCGTTACGTGACGGA 5'& |||| ||.| |||| || | &5' CCAGCCTGGAGATGC-CTATC- 3'
Aspscr1mmu-miR-615-5pbeg:25end:44pic:3' CTAGGCTC-GTGGCCCCTGGGGG 5'& || || ||| ||||||. &5' ---CC-AGCCACA--GGACCCT- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Aspscr1RAID01521301mmu-miR-7b-5pmiRNAMIMAT0000678Aspscr1mRNA68938NGS (Next Generation Sequencing)0.5483
Aspscr1RAID02049646mmu-miR-17-5pmiRNAMIMAT0000649Aspscr1mRNA68938NGS (Next Generation Sequencing)0.5483
Aspscr1RAID03338613mmu-miR-138-5pmiRNAMIMAT0000150Aspscr1mRNA68938Prediction0.1828
Aspscr1RAID03653065mmu-miR-301b-3pmiRNAMIMAT0004186Aspscr1mRNA68938NGS (Next Generation Sequencing)0.5483
Aspscr1RAID03673043mmu-miR-495-3pmiRNAMIMAT0003456Aspscr1mRNA68938Prediction0.1828
Aspscr1RAID04024620mmu-miR-370-3pmiRNAMIMAT0001095Aspscr1mRNA68938Prediction0.1828