DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Ubtd1 | mmu-let-7e | 59 | 82 | -UGAUAUGUUGG---AGGAUGGAGU | :||:|: ::|| ||||:|| | GGCUGUGGGGCCCAGUCCUGCCG-- |
Ubtd1 | mmu-let-7i | 190 | 217 | UGUCGUG-----UUUG--AUGAUGGAGU | |||||| :|:| |:||:||| | UCAGCACCCAGGGAGCAGUGCUGCCUG- |
Ubtd1 | mmu-miR-100 | 267 | 288 | -GUGUUCAAGCCUAGAUGCCCAA | ||||:||| ||| | |:||| | CCACAGGUU-GGAGCCAUGGGG- |
Ubtd1 | mmu-miR-101b | 189 | 214 | GAAGUCGAUAG-----UGUCAUGACAU | ||||| :||||:||| | -CUCAGCACCCAGGGAGCAGUGCUGC- |
Ubtd1 | mmu-miR-103 | 71 | 98 | AGUAUCGGGACAU------GUUACGACGA- | ||:|||| ||:||||||| | ---CAGUCCUGCCGCCUUCCAGUGCUGCUG |
Ubtd1 | mmu-miR-107 | 71 | 98 | ACUAUCGGGACAU------GUUACGACGA- | ||:|||| ||:||||||| | ---CAGUCCUGCCGCCUUCCAGUGCUGCUG |
Ubtd1 | mmu-miR-10a | 267 | 289 | -GUGUUUAAGCCUAGAUGUCCCAU | ||||::|| ||| | |::||| | CCACAGGUU-GGAGCCAUGGGGG- |
Ubtd1 | mmu-miR-122a | 316 | 335 | UGUUUGUGGUAACAGUGUGAGGU- | ||:|::| | ||||||| | ---CACGCUGUG--CUCACUCCAG |
Ubtd1 | mmu-miR-125a | 267 | 290 | -GUGUCCAAUUUCCCAGAGUCCCU | ||||||||::|| | :||| | CCACAGGUUGGAGCCA-UGGGGGC |
Ubtd1 | mmu-miR-125b | 267 | 290 | AGUGUUCAAUCCCAGAGUCCCU- | ||||:|||:| | | ::|||: | CCACAGGUUGGAGCCAUGGGGGC |
Ubtd1 | mmu-miR-127 | 575 | 597 | CGGUUCGAGUCUGCCUAGGCU- | |||:|| :| ||:||||| | CCCAGGCAGGGUGGGGUCCGAA |
Ubtd1 | mmu-miR-128a | 33 | 68 | -UUUUCUCUGG----CCAAG-------UGACACU- | |||||||:|| || | :|||||: | GAAAAGAGGCCAUGGGGGGCCCUGCAGGCUGUGGG |
Ubtd1 | mmu-miR-129-3p | 532 | 562 | UACGAAAAA----CCCCAU-----UCCCGAA | |||| ||||| |||||| | -GGCUUCAUGGCAGGGGUUUGCACAGGGCUG |
Ubtd1 | mmu-miR-132 | 39 | 66 | GCUGGUACC------GACAUCUGACAAU | |:|||||| ||| ||:|||| | AGGCCAUGGGGGGCCCUGCAGGCUGUG- |
Ubtd1 | mmu-miR-133a | 271 | 293 | UGUCGACCAACUU-CCCCUGGUU | :|:||| ||||:||: | -AGGUUGGAGCCAUGGGGGCCGU |
Ubtd1 | mmu-miR-133b | 271 | 293 | AUCGACCAACUU-CCCCUGGUU | :|:||| ||||:||: | AGGUUGGAGCCAUGGGGGCCGU |
Ubtd1 | mmu-miR-134 | 161 | 197 | GGGGAGACCA-GU--------UGGUCAG----UGU- | |||||||| || |||||| :|| | GCCCUCUGGGGCACUGGAUCCACCAGUGCUCAGCAC |
Ubtd1 | mmu-miR-135a | 18 | 48 | AGUGU--------AUCCUUAUUUUUCGGUAU- | :|| |||||| ||:|:|||||: | -GGCACCAACUCCUAGGAA-AAGAGGCCAUGG |
Ubtd1 | mmu-miR-135b | 18 | 48 | GUGU--------AUCCUUACUUUUCGGUAU- | :|| |||||| |:|:|||||: | GGCACCAACUCCUAGGAAA-AGAGGCCAUGG |
Ubtd1 | mmu-miR-138 | 602 | 616 | CUAAGUGUUGUGGUCGA | |||:|:| ||||| | --GUCAUAGC-CCAGCG |
Ubtd1 | mmu-miR-141 | 564 | 588 | -GGUAGAAAU--GGUCUGUCACAAU | ||| || ||||:||| || | CCCAACUGUAACCCAGGCAGGGUG- |
Ubtd1 | mmu-miR-145 | 151 | 181 | -UUCCCUAA-----GGACCCUUUUGACCUG- | |||||| :|||||: ||||||: | GAAGGGACUUGCCCUCUGGGGC-ACUGGAUC |
Ubtd1 | mmu-miR-148a | 148 | 179 | -UGUUUCA---------AGACAUCACGUGACU- | :|:||| |||| ||||||: | UGCGAAGGGACUUGCCCUCUGGG--GCACUGGA |
Ubtd1 | mmu-miR-148b | 148 | 179 | -UGUUUCA---------AGACACUACGUGACU- | :|:||| |||| ||||||: | UGCGAAGGGACUUGCCCUCUGGG--GCACUGGA |
Ubtd1 | mmu-miR-149 | 504 | 535 | CCUC-ACU----UCUGUG-CCU--CGGUCU- | ||| ||| :| :| ||| |||||: | AGAGAUGAGGCGGGUGGCUGGAUAGCCAGGC |
Ubtd1 | mmu-miR-150 | 267 | 290 | -GUGACCAUGUUCCCAACCCUCU | ||| ||| :|| ||||:| | CCACAGGUUGGAGCCAUGGGGGC |
Ubtd1 | mmu-miR-152 | 161 | 179 | -GGGUUCAAGACAGUACGUGACU- | ||| |||| ||||||: | GCCC----UCUGGG--GCACUGGA |
Ubtd1 | mmu-miR-154 | 508 | 532 | -GCU---UCCGUUGUGCCUAUUGGAU | :|| :||:::| :|||||:|| | AUGAGGCGGGUGGC-UGGAUAGCCA- |
Ubtd1 | mmu-miR-15a | 79 | 99 | -GUGUUUGGUAAUACACGACGAU- | |:| ||| ||||||||: | CCGCCUUCCA----GUGCUGCUGU |
Ubtd1 | mmu-miR-15b | 61 | 99 | -ACAUU--------------UGGUACUACACGACGAU- | |||:: :|| ||||||||: | CUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-16 | 79 | 99 | -GCGGUUAUAAAUGCACGACGAU- | |||| ||||||||: | CCGCCUUCCA----GUGCUGCUGU |
Ubtd1 | mmu-miR-17-3p | 43 | 68 | AUGUUCA-CGGGAG---UGACGUCA | |: | ||||| :|||::| | CAUGGGGGGCCCUGCAGGCUGUGGG |
Ubtd1 | mmu-miR-18 | 164 | 186 | AUAGA---CGUGAUCUACGUGGAAU | ||| |||||:||| |||| | -CUCUGGGGCACUGGAUCCACCA-- |
Ubtd1 | mmu-miR-182 | 206 | 238 | ACACUCAAGAUGGU----------AACGGUUU | ||| ||:||| ||||||| | AGUGCUGCCUGCCACACACAGGCCUUGCCAAC |
Ubtd1 | mmu-miR-183 | 385 | 412 | GUCACUUAAGAUGG--------UCACGGUAU | ||| |||:|| ||||||| | --AUGAC-UCUGCCCUGGGCACAGUGCCAG- |
Ubtd1 | mmu-miR-184 | 392 | 416 | -UGGGAAUA--GUCAAGAGG-CAGGU | :|||| |||| || |||| | UGCCCUGGGCACAGUG--CCAGUCCC |
Ubtd1 | mmu-miR-190 | 617 | 639 | -UGGAUUAUAUAGUUUGUAUAGU | :|| :|:|| ||:||| ||| | GGCCCUGUGUA-CAGACACAUCU |
Ubtd1 | mmu-miR-195 | 77 | 99 | -CGGUUAUAAAGA-CACGACGAU- | |||: ||| ||||||||: | UGCCGCC--UUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-196b | 189 | 218 | -GGUUGUU-GUCCUU-----UGAUGGAU- | :||:|| ||||:| :||:|||: | CUCAGCACCCAGGGAGCAGUGCUGCCUGC |
Ubtd1 | mmu-miR-199a | 511 | 548 | CUUGUCCAUCAGACUUG--------------UGACCC- | ::|:|||:| |||:|: :| ||| | AGGCGGGUGG-CUGGAUAGCCAGGCUUCAUGGCAGGGG |
Ubtd1 | mmu-miR-19a | 529 | 557 | AGUCAAAA----CGUAUCUAAACGUGU- | ||| ||| :|:|||||||| | CCAGGCUUCAUGGCAGGGGUUUGCACAG |
Ubtd1 | mmu-miR-19b | 529 | 557 | AGUCAAAA----CGUACCUAAACGUGU- | ||| ||| ||:|||||||| | CCAGGCUUCAUGGCAGGGGUUUGCACAG |
Ubtd1 | mmu-miR-200a | 569 | 588 | UGUAGCAAU-GGUCUGUCACAAU | :|| ||||:||| || | ---CUGUAACCCAGGCAGGGUG- |
Ubtd1 | mmu-miR-204 | 133 | 159 | GUCCGU--AUC-CUAC-UGUUUCCCUU | ||| ||| || :|:|||||| | -UGGCUCUUAGUGAGCUGCGAAGGGAC |
Ubtd1 | mmu-miR-207 | 421 | 460 | CUCCCUCCUCUCGG----UCC------------UCUUCG- | :|||||| ||||| :|| ||:||| | UGGGGAGG-GAGCCCGGUGGGCCCCAGGGCUUAAGGAGCU |
Ubtd1 | mmu-miR-20a | 479 | 498 | -GAUGGACGUGAUAUUCGUGAAAU | || ||||||| ||||| | UCUCCCUGCACCC--AGCACA--- |
Ubtd1 | mmu-miR-20b | 123 | 142 | AUGGACGUGAUACUCGUGAAAC | ||||| |||| || ||| | -CCCUGCUGUAUG-GCUCUUA- |
Ubtd1 | mmu-miR-211 | 539 | 560 | UCCGUUUCCUACUGUUUCCCUU | ||||::|| :|| |||| | UGGCAGGGGUUUGCACAGGGC- |
Ubtd1 | mmu-miR-212 | 286 | 307 | -CCGGCACUGACCUCUG-ACAAU | |||||| |||| ||| ||| | GGGCCGUC-CUGGCGACCUGUC- |
Ubtd1 | mmu-miR-214 | 298 | 325 | GAC-GGACAGA----CACGGA-CGACA- | | |||||| ||||| ||||| | -CGACCUGUCAUCUGGUGCCACGCUGUG |
Ubtd1 | mmu-miR-217 | 182 | 211 | UAGGUC---AGUCAAGGA--CUACGUCAU- | |||| |||| || |: |||||: | -ACCAGUGCUCAGCACCCAGGGAGCAGUGC |
Ubtd1 | mmu-miR-293 | 145 | 177 | UGUGAUGUUU----------GAGACGCCGUGA- | :||:|:|| ||||| |||||| | -AGCUGCGAAGGGACUUGCCCUCUGGGGCACUG |
Ubtd1 | mmu-miR-296 | 29 | 57 | UGUCCUAA-CUC-----CCCCCCGGGA- | :|||| ||| |||||||||| | CUAGGAAAAGAGGCCAUGGGGGGCCCUG |
Ubtd1 | mmu-miR-298 | 453 | 480 | -CCU-----UCUUGUCGGGAGGAGACGG- | ||| ||: :|||: ||||||| | AGGAGCUUCAGGUGGGCCU--CUCUGCCU |
Ubtd1 | mmu-miR-29a | 298 | 317 | -UUGGCUAAAGUCUACCACGAU | :||| ||| |||||| | CGACCUG--UCAUCUGGUGCC- |
Ubtd1 | mmu-miR-29b | 298 | 317 | -UUGUGACUAAAGUUUACCACGAU | :|| ||| ||| |||||| | CGAC-CUG---UCAUCUGGUGCC- |
Ubtd1 | mmu-miR-29c | 77 | 99 | -UGGCUAAAGUUUACCACGAU- | :||| ||| |:|| ||||: | UGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-301 | 532 | 556 | -CGAA--ACUGUUAUGAUAACGUGAC | |||| ||:||: |||||| | GGCUUCAUGGCAGGGGU-UUGCACA- |
Ubtd1 | mmu-miR-301b | 145 | 178 | ACGAAA-----CUGUUAUGGUAA----CGUGAC- | ||| ||| |:|| |||||| | AGCUGCGAAGGGACU-UGCCCUCUGGGGCACUGG |
Ubtd1 | mmu-miR-302b | 338 | 359 | -GAUGAUUUUGUACCUUCGUGAA | ||:|| |:: |||||||| | UCUGCUCAGGGUUGGAAGCAA-- |
Ubtd1 | mmu-miR-302d | 340 | 359 | UGUGAGUUUGUACCUUCGUGAA | :||||:: |||||||| | -UGCUCAGGGUUGGAAGCAA-- |
Ubtd1 | mmu-miR-30a-5p | 609 | 631 | GAAGGUCAGCUCCU--ACAAAUGU- | |||| ||:|| ||| |||| | --CCCAG-CGGGGCCCUGUGUACAG |
Ubtd1 | mmu-miR-30d | 609 | 631 | GAAGGUCAGCCCCU--ACAAAUGU- | |||| ||||| ||| |||| | --CCCAG-CGGGGCCCUGUGUACAG |
Ubtd1 | mmu-miR-31 | 455 | 481 | GUCGAUA--CGGUCGUAGA-ACGGA- | |||| |: :|| ||| ||||| | GAGCUUCAGGUGGGCCUCUCUGCCUC |
Ubtd1 | mmu-miR-324-3p | 182 | 211 | -GGUCG----UCGUGGA-CCC-CGUCACC | ||||: |||||| ||| |||||| | ACCAGUGCUCAGCACCCAGGGAGCAGUGC |
Ubtd1 | mmu-miR-324-5p | 380 | 410 | -GUGGUU-----ACGGGAUCCCC--UACGC | ||||| ||||||:|| :||| | UCACCAUGACUCUGCCCUGGGCACAGUGCC |
Ubtd1 | mmu-miR-325 | 7 | 35 | UGUGAAUGACU--CGUGGAU---GAUCC- | || ||||| ||||| ||||| | -GACGGACUGACGGCACCAACUCCUAGGA |
Ubtd1 | mmu-miR-326 | 415 | 441 | UGACCU---CCUUCC-CGGGUCUCC- | ||||| |||:|| ||||:| || | CCUGGAUGGGGAGGGAGCCCGGUGGG |
Ubtd1 | mmu-miR-328 | 416 | 444 | UGCCUUCCCGUCUCU-------CCCGGUC | :||| ||| ||:|| ||||| | CUGGAUGGGGAGGGAGCCCGGUGGGCCC- |
Ubtd1 | mmu-miR-331 | 28 | 54 | AAGAUCCUA---UCCGGG--UCCCCG- | |||||| ||||| :||||| | -CCUAGGAAAAGAGGCCAUGGGGGGCC |
Ubtd1 | mmu-miR-338 | 490 | 527 | AGUUGUUUUAG------------UGACUAC-GACCU- | ||:|| |||| :| |:|| ||||| | CCAGCACAAUCUGCAGAGAUGAGGCGGGUGGCUGGAU |
Ubtd1 | mmu-miR-339 | 396 | 432 | -ACUCGA------------GGACCU-CCUGUCCCU- | ||:|| |||||| ||: ||||| | CUGGGCACAGUGCCAGUCCCCUGGAUGGGGAGGGAG |
Ubtd1 | mmu-miR-341 | 2 | 21 | UGACUGGCUGGCUGGCUAGCU- | |||:||| |||:|| ||: | --GGACUGACGGACUGA-CGGC |
Ubtd1 | mmu-miR-344 | 501 | 528 | -UGUC---AGUCCGAA-ACCGAUCUAGU | :||| | |||| |||||:||| | UGCAGAGAUGAGGCGGGUGGCUGGAUA- |
Ubtd1 | mmu-miR-345 | 170 | 197 | -CGUGACCUGA----UCCCCAGUCGU- | ||||||||: || | |||||| | GGCACUGGAUCCACCAGUGCUCAGCAC |
Ubtd1 | mmu-miR-346 | 46 | 71 | -UCUCCG-----UCCGUGAGCCCGUCUGU | :|:||| |||| | |||| | GGGGGGCCCUGCAGGCUGUGGGGCC---- |
Ubtd1 | mmu-miR-34a | 155 | 184 | -UUGU-UGGUCGAUUCUGUGAC---GGU- | :|| :|| ||::|:||||| ||| | GGACUUGCCCUCUGGGGCACUGGAUCCAC |
Ubtd1 | mmu-miR-34b | 189 | 218 | GUUAGUCGA------UUAAUG-UGACGGAU- | ||||| :| :||||||: | --CUCAGCACCCAGGGAGCAGUGCUGCCUGC |
Ubtd1 | mmu-miR-34c | 197 | 220 | CGUUA---GUCGAUUGAUGUGACGGA | ||: |||: :||:| ||||| | CCAGGGAGCAGU--GCUGC-CUGCCA |
Ubtd1 | mmu-miR-350 | 128 | 148 | ACUUUCACAUACCC-GAAACACUU- | ||||||| ||| ||||: | -----CUGUAUGGCUCUUAGUGAGC |
Ubtd1 | mmu-miR-351 | 133 | 173 | GUCCGAG------------UUUCCC-GA---GGAGUCCCU | ||||| :||||| || |||| |||: | -UGGCUCUUAGUGAGCUGCGAAGGGACUUGCCCUCUGGGGC |
Ubtd1 | mmu-miR-365 | 152 | 175 | UAUUCCUAAAAAU----CCCCGUAAU | |:||| || |||||| | -AAGGGACUUGCCCUCUGGGGCAC-- |
Ubtd1 | mmu-miR-370 | 595 | 619 | -UUGGUCCAAGGUGGGGUCGUCCG | |:|| ||| :| ||||||:|| | AAGCCUGGUCAUAGCCCAGCGGGG |
Ubtd1 | mmu-miR-424 | 196 | 215 | AGGU--UUUGUACUUAACGACGAC | ||| :|:|| |||||| | CCCAGGGAGCAG----UGCUGCC- |
Ubtd1 | mmu-miR-449 | 196 | 221 | UGGUCGAUUGUUAUGU--GACGGU- | |||| |:||:|:| |||||| | CCCAGGGAGCAGUGCUGCCUGCCAC |
Ubtd1 | mmu-miR-449b | 196 | 220 | -GGUCGAUCGUUACGU--GACGGA | |||| ||||:||| ||||| | CCCAGGGAGCAGUGCUGCCUGCCA |
Ubtd1 | mmu-miR-465-3p | 40 | 58 | AGAUGAAUCUUUCCGGGACUAG | :| | :||||||| | --GGCCAUGGGGGGCCCUGC-- |
Ubtd1 | mmu-miR-469 | 522 | 550 | -CCUGU-GGUUCUAGUUACUUUCUCCGU | |||:| |||:| |: ||| ||:||: | UGGAUAGCCAGGCUUCAUGGCAGGGGUU |
Ubtd1 | mmu-miR-470 | 180 | 205 | AGUGGUCACG-GUCA--GGUUCUU- | ||||||||| ||| |||:|:| | CCACCAGUGCUCAGCACCCAGGGAG |
Ubtd1 | mmu-miR-483 | 417 | 441 | UGUUCUGCCCUCCCCUCC--UCACU- | :||:|||: ||||| :|||: | --UGGAUGGGGAGGGAGCCCGGUGGG |
Ubtd1 | mmu-miR-484 | 582 | 604 | UAGCCCUCCCCUGACU-CGGACU- | ||| |||| | || |||||: | --AGGGUGGGGUCCGAAGCCUGGU |
Ubtd1 | mmu-miR-490 | 580 | 605 | -GUCGUACCUCAGGA---GGUCCAAC | ||| :|||:|||| || ||| | GCAGGGUGGGGUCCGAAGCCUGGUC- |
Ubtd1 | mmu-miR-491 | 533 | 572 | -GGAGUACC-UUCCCA-------------AGGGGU-GA- | |:|||||| |:|||| |||||| || | GCUUCAUGGCAGGGGUUUGCACAGGGCUGUCCCCAACUG |
Ubtd1 | mmu-miR-497 | 65 | 99 | AUGUUUGGUGUCA--------------CACGACGAC- | :::|| |||| ||||||||| | --GGGGCC-CAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-501* | 149 | 175 | -GUUUAG--GAACGGG---CCCACGUAA | |:|| ||||||| ||| ||| | GCGAAGGGACUUGCCCUCUGGG-GCAC- |
Ubtd1 | mmu-miR-503 | 55 | 99 | -CGUCAUGACA---------AGGG-------------CGACGAU | |||| :|||| |||: ||||||: | UGCAG-GCUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-540 | 459 | 481 | -GGUCCUAGCUGGAGAC-UGGA- | :|||| | |:||||| :||| | UUCAGG-UGGGCCUCUCUGCCUC |
Ubtd1 | mmu-miR-542-3p | 346 | 368 | AAAGUCAAUA---GUUA--GACAGUGU | :|||: |||| ||||| | ---GGGUUGGAAGCAAUUGCUGUCU-- |
Ubtd1 | mmu-miR-546 | 73 | 85 | CUGAGGCACGGUGGUA | ||| ||||:|| | --GUCC-UGCCGCCU- |
Ubtd1 | mmu-miR-551b | 567 | 594 | GUGACUUUGG------UUCAUACCCAGC | |||| |||| ::||: ||||| | AACUGUAACCCAGGCAGGGUG-GGGUCC |
Ubtd1 | mmu-miR-615 | 422 | 458 | -UUCUCCCUC--------UGGG--UCCGAG--CCU- | ::||||||| :||| :||||: ||| | GGGGAGGGAGCCCGGUGGGCCCCAGGGCUUAAGGAG |
Ubtd1 | mmu-miR-665 | 151 | 171 | AUUCCCUGGAGUCGGAGGACCA | |||||||:| ||| :|||| | GAAGGGACUU--GCCCUCUGGG |
Ubtd1 | mmu-miR-666 | 133 | 169 | -CCGAGAGUG--UCGAC----------ACGGGCGA- | ||||||:| ||||| ||||| || | UGGCUCUUAGUGAGCUGCGAAGGGACUUGCCCUCUG |
Ubtd1 | mmu-miR-667 | 508 | 526 | GAAC-CCGACCCACCGUCCACAGU | || ||| ||||||| || | -AUGAGGC-GGGUGGCUGGA---- |
Ubtd1 | mmu-miR-670 | 180 | 205 | AAGUGG---UGUA-UGUGAGUCCCUA | |||| :| :||| |||||| | -CCACCAGUGCUCAGCACCCAGGGAG |
Ubtd1 | mmu-miR-671 | 82 | 119 | -GGAGGUCG-------GGGAGG---UCCCGA--AGGA | |:|||||: :|:||: :|||| ||| | CCUUCCAGUGCUGCUGUCUUCUUCAGGGGCGCCUCCC |
Ubtd1 | mmu-miR-672 | 217 | 242 | -GUGUGUGUCAU--GUGGUUGGAGU | ||||||||| ::|||||||: | CCACACACAGGCCUUGCCAACCUUG |
Ubtd1 | mmu-miR-673 | 41 | 69 | GAGGU---UCCUGGUC---UCGACACUC- | ||| :||:|| :||||||:| | -GCCAUGGGGGGCCCUGCAGGCUGUGGGG |
Ubtd1 | mmu-miR-675-5p | 59 | 85 | -UGACA-CCCGGGAAAGG-C-GUGGU | :|||| |||||| ||| | |:|| | GGCUGUGGGGCCCAGUCCUGCCGCCU |
Ubtd1 | mmu-miR-676 | 446 | 470 | -UCGAGUUGUU-GGAGUCCUGCC- | :|||:|| :| |:||||| || | GGGCUUAAGGAGCUUCAGGUGGGC |
Ubtd1 | mmu-miR-676* | 48 | 70 | CGUUCAGGAU-UCCAACAUCUCA | ::| |||: ||| |||:|:| | -GGGGCCCUGCAGGCUGUGGGGC |
Ubtd1 | mmu-miR-681 | 208 | 230 | UCGACGGACGGUCGC--UCCGAC | ||||||||||| |||| | UGCUGCCUGCCACACACAGGCC- |
Ubtd1 | mmu-miR-683 | 514 | 547 | CUCCUGUG----------UCGAA-UGUCGUCC- | :|| :| :|||| |::||||| | CGGGUGGCUGGAUAGCCAGGCUUCAUGGCAGGG |
Ubtd1 | mmu-miR-686 | 334 | 361 | -AGAAGUGGCAGACCC----UUCGUUA- | |:||| | || ||| ||||||| | GUUUUCUGC-UCAGGGUUGGAAGCAAUU |
Ubtd1 | mmu-miR-688 | 201 | 219 | CUUAUUCAUCA--GCGGACGCU | :|| ||| :|||||| | ---GGAGCAGUGCUGCCUGCC- |
Ubtd1 | mmu-miR-689 | 48 | 71 | -CCUGGGGCGGCUCG-C-CCCUGC | ||:|||:|| :|| | |||:| | GGGGCCCUGCA-GGCUGUGGGGCC |
Ubtd1 | mmu-miR-691 | 91 | 112 | AAAAGACGGA--GAGAAGUCCUUA | ||||: :||||||||:: | ---GCUGCUGUCUUCUUCAGGGGC |
Ubtd1 | mmu-miR-692 | 434 | 459 | CUCACUCCG------CGAGUUUCUCUA | :||| ||| |||:||:||| | CGGUG-GGCCCCAGGGCUUAAGGAGC- |
Ubtd1 | mmu-miR-693-3p | 625 | 664 | AAUGUCGGUGUAGAC------------UUUCG---ACG- | ||||| |||||||| ||||| ||| | GUACAGACACAUCUGCAUUUUAUCAAUAAAGCCUUUGCU |
Ubtd1 | mmu-miR-693-5p | 504 | 525 | CUUUUGAAA-GCCUACACCGAC- | :|:|: ||| ||||||| | AGAGAUGAGGCGG--GUGGCUGG |
Ubtd1 | mmu-miR-695 | 56 | 77 | AAGUCAGUGGAUACGGGUUAGA | ||| | : |||||:|| | -GCAGGCUGUGGGGCCCAGUCC |
Ubtd1 | mmu-miR-699 | 196 | 217 | GCUCGGUCCAG---CGUGACGGA- | ||||| |::|||||| | ---CCCAGGGAGCAGUGCUGCCUG |
Ubtd1 | mmu-miR-700 | 583 | 617 | -CCACCUGAG--------CCAA----GGG-CGCAC | |||||: || ||| ||| ||| | GGGUGGGGUCCGAAGCCUGGUCAUAGCCCAGCGG- |
Ubtd1 | mmu-miR-702 | 417 | 443 | CUC-GCCCCA-UUUC---CCACCCGU | :| :|||| ::|| ||||||| | UGGAUGGGGAGGGAGCCCGGUGGGCC |
Ubtd1 | mmu-miR-705 | 88 | 123 | ACGGGUGGG--------------GUGGAGGGUGG- | |: | |: |:||||||||| | AGUGCUGCUGUCUUCUUCAGGGGCGCCUCCCACCG |
Ubtd1 | mmu-miR-707 | 510 | 526 | GCAUCCGUUCGCCGUACUGAC | ||||::|:||| ||: | --GAGGCGGGUGGC-UGGA-- |
Ubtd1 | mmu-miR-709 | 468 | 489 | AGGAG-GACGGAGACGGAGG- | |||| |||||||| ||| | | GCCUCUCUGCCUCUCCCUGCA |
Ubtd1 | mmu-miR-712 | 404 | 433 | CCAUGG-CGGG-------CCCACUUCCUC- | ||:|| |:|| ||| ||:|||| | AGUGCCAGUCCCCUGGAUGGG-GAGGGAGC |
Ubtd1 | mmu-miR-713 | 59 | 94 | -CGACACA--------------CGGAA-GUCACGU | |||||| ||||| |||||| | GGCUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCU |
Ubtd1 | mmu-miR-714 | 284 | 308 | -CGCUGGCU-GGCCG--GGAGCAGC | | |:||| |:||| ||| ||| | GGGGGCCGUCCUGGCGACCU-GUCA |
Ubtd1 | mmu-miR-715 | 540 | 560 | GUGCGCCCCCACACGUGCCUC- | || ||||| ||||| |:| | --GGCAGGGGUUUGCACAGGGC |
Ubtd1 | mmu-miR-718 | 573 | 592 | GCUGUGGG-CCGGCCCGCCUUC | |||| ||| |||:||:: | ---AACCCAGGCAGGGUGGGGU |
Ubtd1 | mmu-miR-744 | 59 | 81 | -CGACAA-UCGGGAUCGGGGCGU | ||||| :|||| ||:||:|| | GGCUGUGGGGCCC-AGUCCUGCC |
Ubtd1 | mmu-miR-761 | 88 | 133 | ACAC------------AGUCAAA----------GUGGGACGACG | ||| |||| |:||||||||: | AGUGCUGCUGUCUUCUUCAGGGGCGCCUCCCACCGCCCUGCUGUA |
Ubtd1 | mmu-miR-762 | 388 | 417 | CGAGACAGGGCCGG------GGUCGGGG- | ||||| ||:|| | ||||:||| | ACUCUGCCCUGGGCACAGUGCCAGUCCCC |
Ubtd1 | mmu-miR-763 | 596 | 619 | -CGGUGACCAAGAA-GGGUCGACC- | ||| |||| |||||| || | AGCC--UGGUCAUAGCCCAGCGGGG |
Ubtd1 | mmu-miR-764-3p | 268 | 297 | -UGUCAA----CGGUGAUACCGG-AGGA- | |||| ||||: |||| |||| | CACAGGUUGGAGCCAUGGGGGCCGUCCUG |
Ubtd1 | mmu-miR-764-5p | 422 | 446 | -UCCUCCU---GUACACUCGUGG- | :|||||: | |||:|| || | GGGGAGGGAGCCCGGUGGGCCCCA |
Ubtd1 | mmu-miR-770-3p | 591 | 617 | -GGUCGAGGUGCAGUC-CGGGU-GC- | ||: || |||| ||||| || | UCCGAAGCCUGGUCAUAGCCCAGCGG |
Ubtd1 | mmu-miR-93 | 479 | 498 | -GAUGGACGUGCUUGUCGUGAAAC | || ||||||| |||||| | UCUCCCUGCACC--CAGCACA--- |
Ubtd1 | mmu-miR-125a | 342 | 349 | --------------------GUGUCCAAUUUCCCAGAGUCCCU | ||| ||||||| | AUCUGGUGCCACGCUGUGCUCACUCCAGUUUUCUGCUCAGGGU |
Ubtd1 | mmu-miR-125b | 342 | 349 | -------------------AGUGU--UCAAUCCCAGAGUCCCU | |||| |||| ||||||| | AUCUGGUGCCACGCUGUGCUCACUCCAGUUUUCUGCUCAGGGU |
Ubtd1 | mmu-miR-15a | 90 | 97 | GUGUUUGGUAAUA---------------------CACGACGAU | :||::|::| ||||||||: | UGCAGGCUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-15b | 90 | 97 | ACAUUUGGUACUA---------------------CACGACGAU | || |::|::||: ||||||||: | UGCAGGCUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-16 | 90 | 97 | -------------------------GCGGUUAUAAAUGCACGACGAU | |||| ||||||||: | UGCAGGCUGUGGGGCCCAGUCCUGCCGCCUUCCA----GUGCUGCUGU |
Ubtd1 | mmu-miR-182 | 230 | 237 | A-----------CACUCAAGAUGGU----------AACGGUUU | ||| ||:||| ||||||| | ACCCAGGGAGCAGUGCUGCCUGCCACACACAGGCCUUGCCAAC |
Ubtd1 | mmu-miR-195 | 90 | 97 | -----------------------CGGUUAUAAAGA-CACGACGAU | |||: ||| ||||||||: | UGCAGGCUGUGGGGCCCAGUCCUGCCGCC--UUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-19a | 548 | 555 | A----------------GUCAAAA----CGUAUCUAAACGUGU | ||| ||| :|:|||||||| | GCGGGUGGCUGGAUAGCCAGGCUUCAUGGCAGGGGUUUGCACAG |
Ubtd1 | mmu-miR-19b | 548 | 555 | A----------------GUCAAAA----CGUACCUAAACGUGU | ||| ||| ||:|||||||| | GCGGGUGGCUGGAUAGCCAGGCUUCAUGGCAGGGGUUUGCACAG |
Ubtd1 | mmu-miR-214 | 124 | 131 | ---GACGGACAGACAC--------------------GGACGACA | |||| ||||| |||||||| | GUGCUGC-UGUCUUCUUCAGGGGCGCCUCCCACCGCCCUGCUGUA |
Ubtd1 | mmu-miR-296 | 48 | 55 | U----------------GUCCUAA-CUC-----CCCCCCGGGA | :|||| ||| |||||||||| | CUGACGGCACCAACUCCUAGGAAAAGAGGCCAUGGGGGGCCCUG |
Ubtd1 | mmu-miR-296 | 65 | 72 | -------UGUCCUA-ACUCCC--------------CCCCGGGA | | ||| ||:||| ||||||| | UAGGAAAAGAGGCCAUGGGGGGCCCUGCAGGCUGUGGGGCCCA |
Ubtd1 | mmu-miR-296 | 615 | 622 | UGUCCUAACUCCC------------------------CCCCGGGA | :||||:| :||| |||||||| | GCAGGGU--GGGGUCCGAAGCCUGGUCAUAGCCCAGCGGGGCCCUG |
Ubtd1 | mmu-miR-351 | 342 | 349 | GUC--------------CGAGUU---UCCC--GAGGAGUCCCU | ||||| || || ||||||| | AUCUGGUGCCACGCUGUGCUCACUCCAGUUUUCUGCUCAGGGU |
Ubtd1 | mmu-miR-424 | 90 | 97 | -------------------AGGUUU-UGUACUUA-ACGACGAC | ||| :| |||||||| | UGCAGGCUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-455-5p | 249 | 256 | GCUAC---------------------AUCAGGUUUCCGUGUAU | |:| ||||||||||: | CUGCCACACACAGGCCUUGCCAACCUUGGAGAAAAGGCACAUGG |
Ubtd1 | mmu-miR-469 | 36 | 43 | C----------------CUGUGGUUCUA-GUUACUUUCUCCGU | |:|||||| :|: |||||||| | CGGACUGACGGACUGACGGCACCAACUCCUAGGAAAAGAGGCC |
Ubtd1 | mmu-miR-497 | 90 | 97 | AUGUUUGGUGUCA---------------------CACGACGAC | |:||::|:: | ||||||||| | UGCAGGCUGUGGGGCCCAGUCCUGCCGCCUUCCAGUGCUGCUGU |
Ubtd1 | mmu-miR-686 | 352 | 359 | ---------------------AGA--AGUGGCAGACCCUUCGUUA | ||| ||| ||: ||||||||| | ACGCUGUGCUCACUCCAGUUUUCUGCUCAGGGUU--GGAAGCAAUU |
Ubtd1 | mmu-miR-702 | 435 | 442 | ------------------CUCGCCCCA-UUUC---CCACCCGU | | :|||| ::|| ||||||| | GCACAGUGCCAGUCCCCUGGAUGGGGAGGGAGCCCGGUGGGCC |
Ubtd1 | mmu-miR-702 | 463 | 470 | ----------CUCG----CCCC-AUUUC-------CCACCCGU | |:|| ||| |||:| ||||||| | GGAGCCCGGUGGGCCCCAGGGCUUAAGGAGCUUCAGGUGGGCC |
Ubtd1 | mmu-miR-705 | 114 | 121 | ACGGGUGGG--------------------------GUGGAGGGUGG | ||:||: |:||||||||| | ---CCGCCUUCCAGUGCUGCUGUCUUCUUCAGGGGCGCCUCCCACCG |
Ubtd1 | mmu-miR-709 | 474 | 481 | A------------------GGAGGAC------GGAGACGGAGG | |:|| | :|||||||||: | GGCCCCAGGGCUUAAGGAGCUUCAGGUGGGCCUCUCUGCCUCUC |
Ubtd1 | mmu-miR-761 | 124 | 131 | ACAC-----------AGUCAAA----------GUGGGACGACG | |||| |:||||||||: | GUGCUGCUGUCUUCUUCAGGGGCGCCUCCCACCGCCCUGCUGUA |
Ubtd1 | mmu-let-7e | 60 | 83 | uGAUAUGUUGG---AGGAUGGAGu | ||:|: ::|| ||||:|| | | gCTGTGGGGCCCAGTCCTGCCGCc |
Ubtd1 | mmu-let-7i | 190 | 217 | uGUCGUG-----UUUG--AUGAUGGAgu | |||||| :|:| |:||:||| | tCAGCACCCAGGGAGCAGTGCTGCCTgc |
Ubtd1 | mmu-miR-100 | 268 | 288 | GUGUUCAAGCCUAGAUGCCCaa | ||||:||| ||| | |:||| | CACAGGTT-GGAGCCATGGGgg |
Ubtd1 | mmu-miR-101b | 188 | 214 | gaAGUCGAUAGU-----GUCAUGACau | ||||| || ||||:||| | gcTCAGCACCCAGGGAGCAGTGCTGcc |
Ubtd1 | mmu-miR-103 | 68 | 96 | aguaUCGGGAC------AUGUUACGACGA | ||:|||| | ||:||||||| | gcccAGTCCTGCCGCCTTCCAGTGCTGCT |
Ubtd1 | mmu-miR-107 | 68 | 96 | acuaUCGGGAC------AUGUUACGACGA | ||:|||| | ||:||||||| | gcccAGTCCTGCCGCCTTCCAGTGCTGCT |
Ubtd1 | mmu-miR-10a | 268 | 289 | GUGUUUAAGCCUAGAUGUCCCau | ||||::|| ||| | |::||| | CACAGGTT-GGAGCCATGGGGgc |
Ubtd1 | mmu-miR-122a | 308 | 333 | uGUUUGUGGU--AACA-GUGUGAGGU | | ::::||| ||| | ||||||| | tCTGGTGCCACGCTGTGCTCACTCCA |
Ubtd1 | mmu-miR-125a | 330 | 349 | guGUCCAAUUUCCCAGAGUCCCu | ||| || | ||||||| | tcCAGTTTTCTG---CTCAGGGt |
Ubtd1 | mmu-miR-125a | 268 | 288 | GUGUCCAAUUUCCCAGAGUCCCu | ||||||||::| | | ::||| | CACAGGTTGGA--GCCATGGGGg |
Ubtd1 | mmu-miR-125b | 326 | 349 | AGU--GUUCAAUCCCAGAGUCCCu | ||| | |||| ||||||| | TCACTCCAGTTTTCTGCTCAGGGt |
Ubtd1 | mmu-miR-128a | 34 | 66 | UUUUCUCUGG------CC---AAGU--GACACu | |||||||:|| || | || ||||| | AAAAGAGGCCATGGGGGGCCCTGCAGGCTGTGg |
Ubtd1 | mmu-miR-129-3p | 531 | 561 | UACGAAAAA----CCCCA-----UUCCCGAa | | |||| | ||||| |||||| | AGGCTTCATGGCAGGGGTTTGCACAGGGCTg |
Ubtd1 | mmu-miR-132 | 39 | 66 | gCUGGUACC------GACAUCUGACAau | |:|||||| ||| ||:|||| | aGGCCATGGGGGGCCCTGCAGGCTGTgg |
Ubtd1 | mmu-miR-133a | 266 | 292 | UGUCGACCAACUU-----CCCCUGGuu | || | |||||:| ||||:|| | ACCACAGGTTGGAGCCATGGGGGCCgt |
Ubtd1 | mmu-miR-133b | 267 | 292 | aucGACCAACUU-----CCCCUGGuu | | |||||:| ||||:|| | ccaCAGGTTGGAGCCATGGGGGCCgt |
Ubtd1 | mmu-miR-135a | 25 | 46 | aGUGUAUCCUUAUUUUUCGGUAu | | | |||||| ||:|:||||| | aCTCCTAGGAA-AAGAGGCCATg |
Ubtd1 | mmu-miR-135b | 26 | 46 | GUGUAUCCUUACUUUUCGGUAu | | | |||||| |:|:||||| | CTCCTAGGAA-AAGAGGCCATg |
Ubtd1 | mmu-miR-138 | 600 | 615 | cuaAGUGUUGUGGUCGa | |||:|:| ||||| | tggTCATAGC-CCAGCg |
Ubtd1 | mmu-miR-141 | 565 | 588 | GGUAGAAAU--GGUCUGUCACAau | ||| || || ||||:||| || | CCAACTGTAACCCAGGCAGGGTgg |
Ubtd1 | mmu-miR-145 | 152 | 179 | UUCCCU-AA--GGA-CCCUUUUGACCUg | |||||| || ||| ||:: |||||| | AAGGGACTTGCCCTCTGGGGCACTGGAt |
Ubtd1 | mmu-miR-148a | 149 | 177 | uGUUUC----AA---GACAUCACGUGACu | |:||| || || |:| |||||| | gCGAAGGGACTTGCCCTCTGGGGCACTGg |
Ubtd1 | mmu-miR-148b | 149 | 177 | uGUUUC----AA---GACACUACGUGACu | |:||| || || ||: |||||| | gCGAAGGGACTTGCCCTCTGGGGCACTGg |
Ubtd1 | mmu-miR-149 | 512 | 533 | CCUCACUUCUGUGCC--UCGGUCu | || | |: |:| :|| |||||| | GGCG-GGTGGC-TGGATAGCCAGg |
Ubtd1 | mmu-miR-150 | 268 | 289 | GUGACCAUGUUCCCAACCCUCu | ||| ||| :|| ||||:| | CACAGGTTGGAGCCATGGGGGc |
Ubtd1 | mmu-miR-152 | 162 | 177 | GGGUUCAAGACAGUACGUGACu | ||| |||| : |||||| | CCC----TCTG--GGGCACTGg |
Ubtd1 | mmu-miR-154 | 512 | 532 | gCUUCCGUUGUGCCUAUUGGau | | :||:::| :|||||:|| | gGCGGGTGGC-TGGATAGCCag |
Ubtd1 | mmu-miR-15a | 80 | 97 | GUGUUUGGUAAUACACGACGAu | |:| ||| |||||||| | CGCCTTCCA----GTGCTGCTg |
Ubtd1 | mmu-miR-15b | 76 | 97 | acauuuGGUACUACACGACGAu | || | |||||||| | ctgccgCCTTCCAGTGCTGCTg |
Ubtd1 | mmu-miR-16 | 80 | 97 | GCGGUUAUAAAUG-CACGACGAu | |||| || | |||||||| | CGCC-----TTCCAGTGCTGCTg |
Ubtd1 | mmu-miR-18 | 163 | 200 | auAGA---CGUGAUCUA-------------CGUGGaau | ||| |||||:||| ||||| | ccTCTGGGGCACTGGATCCACCAGTGCTCAGCACCcag |
Ubtd1 | mmu-miR-182 | 208 | 237 | AC-ACUCAAGAUG---GU----AACGGUUu | || || | | || || ||||||| | TGCTGCCTGCCACACACAGGCCTTGCCAAc |
Ubtd1 | mmu-miR-183 | 384 | 412 | GUCACUUAAGAUG--------GUCACGGUau | || || | |||:| |||||||| | CA-TG-ACTCTGCCCTGGGCACAGTGCCAgt |
Ubtd1 | mmu-miR-184 | 376 | 397 | uGGGAAUAGUCAAGAGGCAGGu | |||| | || |||:| || | tCCCTCACCATGACTCTGCCCt |
Ubtd1 | mmu-miR-190 | 619 | 638 | uGGAUUAUAUAGUUUGUAUAGu | ||| :|:|| ||:||| ||| | cCCT-GTGTA-CAGACACATCt |
Ubtd1 | mmu-miR-195 | 78 | 97 | CGGUUAUAAAGACACGACGAu | ||| : || | |||||||| | GCC-GCCTTCCAGTGCTGCTg |
Ubtd1 | mmu-miR-196b | 190 | 216 | gGUUGU-UGUCCUU-----UGAUGGAu | ||:|| ||||:| :||:||| | tCAGCACCCAGGGAGCAGTGCTGCCTg |
Ubtd1 | mmu-miR-199a | 539 | 558 | cuuGUCCAUCAGACUUGUGACCC | |||| :||:| :||| ||| | tggCAGG-GGTTT--GCACAGGG |
Ubtd1 | mmu-miR-19a | 529 | 555 | aGUC--AA--AACGUAUCUAAACGUGU | ||| || | ||| :|:|||||||| | cCAGGCTTCATGGCAGGGGTTTGCACA |
Ubtd1 | mmu-miR-19b | 529 | 555 | aGUC--AA--AACGUACCUAAACGUGU | ||| || | ||| ||:|||||||| | cCAGGCTTCATGGCAGGGGTTTGCACA |
Ubtd1 | mmu-miR-200a | 565 | 588 | uGUAG-CAAU-GGUCUGUCACAau | || | || | ||||:||| || | cCAACTGTAACCCAGGCAGGGTgg |
Ubtd1 | mmu-miR-204 | 132 | 158 | guCC--GUAUC-CU--ACUGUUUCCCUu | || | ||| || || |:|||||| | atGGCTCTTAGTGAGCTG-CGAAGGGAc |
Ubtd1 | mmu-miR-207 | 396 | 429 | cuCCCUCCUCUCGGU-----------CCUCUUCg | ||| || |||| ||:||:| | ctGGGCACAGTGCCAGTCCCCTGGATGGGGAGGg |
Ubtd1 | mmu-miR-20a | 480 | 500 | GAUGGACGUGAUAUUCGUGaaau | || ||||||| ||||| | CTCCCTGCAC--CCAGCACaatc |
Ubtd1 | mmu-miR-20b | 122 | 142 | auGGACGUGAUACUCGUGAAac | ||||| |||| || ||| | gcCCTGCTGTATG-GCTCTTag |
Ubtd1 | mmu-miR-211 | 539 | 560 | uCCGUUUCCUACUGUUUCCCuu | ||||::|| | :|| |||| | tGGCAGGGGTTTGCACAGGGct |
Ubtd1 | mmu-miR-212 | 287 | 307 | CCGGCACUGACCUCU-GACAau | |||||| |||| || |||| | GGCCGT-CCTGGCGACCTGTca |
Ubtd1 | mmu-miR-214 | 110 | 131 | gaCGGACAGACAC-GGACGACA | |||| | | |||||||| | gcGCCTCCCACCGCCCTGCTGT |
Ubtd1 | mmu-miR-214 | 294 | 323 | GAC----GGAC---AGA-CACGG-ACGACA | ||| |||| ||| ||||| ||||| | CTGGCGACCTGTCATCTGGTGCCACGCTGT |
Ubtd1 | mmu-miR-217 | 181 | 209 | uaGGUC---AGUCAAGG--ACUACGUCAu | |||| |||| || |: ||||| | caCCAGTGCTCAGCACCCAGGGAGCAGTg |
Ubtd1 | mmu-miR-22 | 529 | 547 | uGUCAAGAAGUUGACCGUCgaa | ||| ||||| |||||| | cCAG-GCTTCA--TGGCAGggg |
Ubtd1 | mmu-miR-293 | 154 | 175 | ugugauguuuGAGACGCCGUGA | ||||| |||||| | gggacttgccCTCTGGGGCACT |
Ubtd1 | mmu-miR-296 | 29 | 55 | ugUCC-UAACUC-----CCCCCCGGGA | ||| | ||| |||||||||| | ctAGGAAAAGAGGCCATGGGGGGCCCT |
Ubtd1 | mmu-miR-296 | 602 | 622 | uguccuaacucCCCCCCGGGA | | |||||||| | gtcatagcccaGCGGGGCCCT |
Ubtd1 | mmu-miR-296 | 56 | 77 | uGUCCUAACUCCCCCCCGGGA----- | |||| | | ||||||| | gCAGGCT----GTGGGGCCCAGTCCT |
Ubtd1 | mmu-miR-298 | 459 | 478 | ccuUCUUGUCGGGAGGAGACGG | ||: :||| :||||||| | ttcAGGTGGGCC--TCTCTGCC |
Ubtd1 | mmu-miR-29a | 295 | 317 | uugGCU--AAAGUCUACCACGau | ||| | ||| |||||| | tggCGACCTGTCATCTGGTGCca |
Ubtd1 | mmu-miR-29b | 299 | 317 | uUGUGACUAAAGUUUACCACGau | || ||| ||| |||||| | gAC-CTG---TCATCTGGTGCca |
Ubtd1 | mmu-miR-29c | 78 | 97 | uGGCUAAAGUUUACCACGAu | ||| ||| |:|| |||| | gCCGCCTTCCAGTGCTGCTg |
Ubtd1 | mmu-miR-301 | 533 | 556 | CGAA--ACUGUUAUGAUAACGUGac | |||| ||:||: : | |||||| | GCTTCATGGCAGGGGT-TTGCACag |
Ubtd1 | mmu-miR-302b | 339 | 360 | GAUGAUUUUGUACCUUCGUGAA | ||:|| |:: |||||||| || | CTGCTCAGGGTTGGAAGCAATT |
Ubtd1 | mmu-miR-302d | 339 | 360 | uguGAGUUUGUACCUUCGUGAA | ||||:: |||||||| || | ctgCTCAGGGTTGGAAGCAATT |
Ubtd1 | mmu-miR-30a-5p | 607 | 629 | gaaGGUCAGCUCC--UACAAAUGU | |||| ||:|| ||| |||| | agcCCAG-CGGGGCCCTGTGTACA |
Ubtd1 | mmu-miR-30d | 607 | 629 | gaaGGUCAGCCCC--UACAAAUGU | |||| ||||| ||| |||| | agcCCAG-CGGGGCCCTGTGTACA |
Ubtd1 | mmu-miR-324-3p | 183 | 210 | GGUC----GUCGU-GGACCC-CGUCACc | |||| ||||| || ||| |||||| | CCAGTGCTCAGCACCCAGGGAGCAGTGc |
Ubtd1 | mmu-miR-324-5p | 406 | 430 | guGGUUACGGGAU---CCCCUACgc | |||:| ||||: ||||| | | tgCCAGTCCCCTGGATGGGGAGGga |
Ubtd1 | mmu-miR-325 | 6 | 33 | ugUGAAUGACU--CGUG---GAUGAUCC | || ||||| |||| || ||||| | tgACGGACTGACGGCACCAACTCCTAGG |
Ubtd1 | mmu-miR-326 | 425 | 449 | ugaCCUC---CUUCCC-GGGUCUCc | |||| |: ||| |||||:| | gagGGAGCCCGGTGGGCCCCAGGGc |
Ubtd1 | mmu-miR-328 | 422 | 444 | ugCCUUCC-CGUCUCUCCCGGuc | |||:|| || :| ||||| | ggGGAGGGAGCCCGGTGGGCCcc |
Ubtd1 | mmu-miR-331 | 27 | 50 | AAGAUCC-UAUC-CGGGU-CCCCg | | ||||| | || | ||| |||| | TCCTAGGAAAAGAGGCCATGGGGg |
Ubtd1 | mmu-miR-338 | 499 | 525 | AGUUGU-UUUAGU--GACUA-CGACCU | || :|| |:|| | | |:| |||||| | TCTGCAGAGATGAGGCGGGTGGCTGGA |
Ubtd1 | mmu-miR-339 | 408 | 430 | acUC-GAGGACCU-CCUGUCCCU | || | |||||| ||: ||||| | ccAGTCCCCTGGATGGGGAGGGA |
Ubtd1 | mmu-miR-341 | 1 | 19 | uGACUGGCUGGCUGGCUAGCu | | |||:||| |||:|| || | -CGGACTGACGGACTGA-CGg |
Ubtd1 | mmu-miR-344 | 502 | 528 | uGUC---AGUCCG-AAACCGAUCUAgu | ||| | |||| |||||:||| | gCAGAGATGAGGCGGGTGGCTGGATag |
Ubtd1 | mmu-miR-345 | 171 | 195 | CGUGACC----UGAUCCCCAGUCGU | ||||||| || || | |||||| | GCACTGGATCCACCAGTGCTCAGCA |
Ubtd1 | mmu-miR-346 | 37 | 62 | UCUCCG------UCCGUGAGCCCGUCUGu | |||||| :||| || ||||:| | AGAGGCCATGGGGGGCCCT---GCAGGCt |
Ubtd1 | mmu-miR-34a | 157 | 182 | uuguuGGUCGAUUCUGUGAC---GGU | || ||::|:||||| ||| | acttgCCCTCTGGGGCACTGGATCCA |
Ubtd1 | mmu-miR-34b | 194 | 216 | GUUAGUCGAUUAAUGUGACGGAu | || ||| |: :::|||||| | CACCCAGGGAGCAGTGCTGCCTg |
Ubtd1 | mmu-miR-34c | 193 | 215 | CGUUAGUCGAUUGAUGUGACGGA | ||| ||| |:| :::|||||| | GCACCCAGGGAGCAGTGCTGCCT |
Ubtd1 | mmu-miR-350 | 123 | 146 | acuuucACAUACC-CGAAACACUu | ||||||| ||| |||| | ccctgcTGTATGGCTCTTAGTGAg |
Ubtd1 | mmu-miR-351 | 320 | 349 | GUC-CGAGU---UUCCCGAG--GAGUCCCu | | | ||||| || :|| ||||||| | CTGTGCTCACTCCAGTTTTCTGCTCAGGGt |
Ubtd1 | mmu-miR-351 | 143 | 171 | gucCGA-GUUUCCC-GA---GGAGUCCCu | ||| |:||||| || |||| ||| | tgaGCTGCGAAGGGACTTGCCCTCTGGGg |
Ubtd1 | mmu-miR-365 | 151 | 176 | uaUUCCUAAA----AAUCCCCGUAAu | |:||| || | |||||| | | gaAGGGACTTGCCCTCTGGGGCACTg |
Ubtd1 | mmu-miR-370 | 596 | 618 | UUGGUCCAAGGUGGGGUCGUCCg | |:|| ||| :| ||||||:|| | AGCCTGGTCATAGCCCAGCGGGg |
Ubtd1 | mmu-miR-424 | 76 | 97 | agguuuuGUACUUAACGACGAC | | | | |||||||| | ctgccgcCTTCCAGTGCTGCTG |
Ubtd1 | mmu-miR-424 | 195 | 215 | aGGUUUUGUACUUAACGACGac | || |:: | | | |||||| | aCCCAGGGA-GCAGTGCTGCct |
Ubtd1 | mmu-miR-449b | 197 | 215 | GGUCGAUCGUUACGUGACGGA | |||| |||| |::|||||| | CCAGGGAGCA--GTGCTGCCT |
Ubtd1 | mmu-miR-455-5p | 237 | 256 | gcuACAUCAGGUUUCCGUGUAu | || || |||||||||| | cctTGGAG--AAAAGGCACATg |
Ubtd1 | mmu-miR-465-3p | 38 | 59 | agaugaauCUUUCCGGGACuag | |:::||||||| | gaggccatGGGGGGCCCTGcag |
Ubtd1 | mmu-miR-469 | 17 | 43 | cCUGUGGUUCUAGUUAC-UUUCUCCGu | |:|||||| | | | |||||||| | cGGCACCAACTCCTAGGAAAAGAGGCc |
Ubtd1 | mmu-miR-469 | 523 | 549 | CCUGU-GGUUCUAGUUACUUUCUCCgu | |||:| |||:| |: |||: ||:|| | GGATAGCCAGGCTTCATGGCAGGGGtt |
Ubtd1 | mmu-miR-483 | 431 | 460 | uguuCUGCCC----UCCC---CUCCUCacu | |::||| |||| ||||| | gcccGGTGGGCCCCAGGGCTTAAGGAGctt |
Ubtd1 | mmu-miR-484 | 580 | 602 | uagCCCUCCCCUGAC-UCGGACu | ||| |||| | | |||||| | gcaGGGTGGGGTCCGAAGCCTGg |
Ubtd1 | mmu-miR-490 | 581 | 605 | GUCGUACCUCAGG---AGGUCCAac | ||| :|||:|||| || ||| | CAGGGTGGGGTCCGAAGCCTGGTca |
Ubtd1 | mmu-miR-491 | 534 | 569 | GGAGUACC-UUCCCA-------------AGGGGUga | |:|||||| |:|||| |||||| | CTTCATGGCAGGGGTTTGCACAGGGCTGTCCCCAac |
Ubtd1 | mmu-miR-497 | 73 | 97 | auguuuGGUGUCA---CACGACGAC | ||:| | ||||||||| | gtcctgCCGCCTTCCAGTGCTGCTG |
Ubtd1 | mmu-miR-501* | 152 | 175 | guuuagGAACGG--GCCCACGUaa | |||||| | || ||| | aagggaCTTGCCCTCTGGGGCAct |
Ubtd1 | mmu-miR-503 | 70 | 97 | cGUCAUGAC-----AAGG--GCGACGAu | |||| ||| |||| :|||||| | cCAGTCCTGCCGCCTTCCAGTGCTGCTg |
Ubtd1 | mmu-miR-540 | 460 | 479 | gGUCCUAGCUG--GAGACUGGA | |||| | |:| ||||| ||| | tCAGG-TGGGCCTCTCTG-CCT |
Ubtd1 | mmu-miR-542-3p | 341 | 369 | aaAGU--CAA---UAGUUA--GACAGUGu | ||| ||| | |||| ||||| | | gcTCAGGGTTGGAAGCAATTGCTGTCTCc |
Ubtd1 | mmu-miR-546 | 71 | 85 | cUGAGGCACGGUGGua | | ||| ||||:|| | cAGTCC-TGCCGCCtt |
Ubtd1 | mmu-miR-615 | 423 | 448 | uuCUCCCUCUGG--GUCCGAG--CCu | ||||||| || ::||| | || | ggGAGGGAGCCCGGTGGGCCCCAGGg |
Ubtd1 | mmu-miR-666 | 134 | 167 | CCGAGAGU--GUCGAC----------ACGGGCGA | ||||||:| ||||| ||||| || | GGCTCTTAGTGAGCTGCGAAGGGACTTGCCCTCT |
Ubtd1 | mmu-miR-667 | 497 | 522 | gaaccCGAC-C--CACCGUCCACAGu | || | | | |||:|||| | | aatctGCAGAGATGAGGCGGGTGGCt |
Ubtd1 | mmu-miR-670 | 179 | 204 | AAGUGGU-----GUAUGUGAGUCCCUa | | ||||| || :||| |||||| | TCCACCAGTGCTCA-GCACCCAGGGAg |
Ubtd1 | mmu-miR-671 | 67 | 88 | ggaGGUCGGGGAGGUCCCGAAGGa | ||||:||: || | ||||| | ggcCCAGTCCTGCC--GCCTTCCa |
Ubtd1 | mmu-miR-671 | 113 | 141 | GGA-GGU--CGGG--GAGGUCCCGAagga | ||| ||| |||| || :| |||| | CCTCCCACCGCCCTGCTGTATGGCTctta |
Ubtd1 | mmu-miR-672 | 218 | 241 | GUGUGUGUCAUG--UGGUUGGAgu | ||||||||| | :||||||| | CACACACAGGCCTTGCCAACCTtg |
Ubtd1 | mmu-miR-673 | 40 | 67 | gaGGU----UCCUGGUC--UCGACACUC | ||| :|| || | :||||||:| | ggCCATGGGGGGCCCTGCAGGCTGTGGG |
Ubtd1 | mmu-miR-675-5p | 60 | 86 | uGACA-CCCGGG--A--AAGGCGuggu | |||| |||||| | | |||| | gCTGTGGGGCCCAGTCCTGCCGCcttc |
Ubtd1 | mmu-miR-676 | 430 | 451 | UCGAGUUG-UUGGAGUCCUGcc | ||| |::: ::|| ||||:| | AGCCCGGTGGGCCCCAGGGCtt |
Ubtd1 | mmu-miR-676* | 47 | 69 | CGUUCAGGAU-UCCAACAUCUCa | | ::| |||: ||| |||:|:| | GGGGGCCCTGCAGGCTGTGGGGc |
Ubtd1 | mmu-miR-681 | 208 | 230 | uCGACGGACGGU---CGCUCCGac | ||||||||||| | |||| | tGCTGCCTGCCACACAC-AGGCct |
Ubtd1 | mmu-miR-683 | 521 | 545 | cuCCUGU--GU-CGAA-UGUCGUCC | |||:| || |||| |::||||| | ctGGATAGCCAGGCTTCATGGCAGG |
Ubtd1 | mmu-miR-686 | 338 | 359 | AGAAGUGGCAGACCCUUCGUUA | ||| | | | | ||||||||| | TCTGCTCAGGGTTGGAAGCAAT |
Ubtd1 | mmu-miR-688 | 201 | 219 | CUUAUUCAUCAGCGGACGcu | |:| ||| | :|||||| | GGAGCAGT-GCTGCCTGCca |
Ubtd1 | mmu-miR-689 | 49 | 71 | CCUGGGGCGGCU--CGCCCCUGc | ||:|||:|| |: |:|||| | | GGGCCCTGCAGGCTGTGGGGCCc |
Ubtd1 | mmu-miR-692 | 434 | 459 | cuCACUC-----CGCGAGUUUCUCua | |||:| | |||:||:||| | cgGTGGGCCCCAGGGCTTAAGGAGct |
Ubtd1 | mmu-miR-693-5p | 505 | 523 | cuuuugaaaGCCUACACCGAC | ||| ||||||| | gagatgaggCGG--GTGGCTG |
Ubtd1 | mmu-miR-695 | 55 | 76 | AAGUCAGUGGAUACGGGUUAGa | | ||| | : : |||||:|| | TGCAGGCTGTGGGGCCCAGTCc |
Ubtd1 | mmu-miR-699 | 193 | 215 | gcUCGGUCCAGCGU---GACGGA | | ||||| ||| |||||| | gcACCCAGGGAGCAGTGCTGCCT |
Ubtd1 | mmu-miR-700 | 584 | 617 | CCACCUGAG--------CCA--A--GGG-CGCac | |||||: || ||| | ||| ||| | GGTGGGGTCCGAAGCCTGGTCATAGCCCAGCGgg |
Ubtd1 | mmu-miR-702 | 419 | 442 | CUCGCCCCAUUUC---CCACCCGu | || ||| ::|| ||||||| | GATGGGGAGGGAGCCCGGTGGGCc |
Ubtd1 | mmu-miR-702 | 438 | 470 | CUCG----CCCCAUUUC--------CCACCCGu | |:|| ||| | ||| ||||||| | GGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCc |
Ubtd1 | mmu-miR-705 | 96 | 121 | ACGGGUGGGGU------GGAGGGUGG | ||:|: |::|| ||||||||| | TGTCTTCTTCAGGGGCGCCTCCCACC |
Ubtd1 | mmu-miR-705 | 67 | 90 | aCGGGU--GG--GGUGGAGGGUgg | ||||| || ||:|||:||| | gGCCCAGTCCTGCCGCCTTCCAgt |
Ubtd1 | mmu-miR-707 | 524 | 544 | gcAUCCGUUCGCCGUACUGac | ||| ||:|| ||||:| | gaTAGCCAGGCTTCATGGCag |
Ubtd1 | mmu-miR-709 | 465 | 481 | aggaGGACGGAGACGGAGg | ||| ||||||||| | tgggCCT--CTCTGCCTCt |
Ubtd1 | mmu-miR-713 | 75 | 93 | cGACACACGGAA-GUCACGu | ||| ||||| |||||| | cCTG-CCGCCTTCCAGTGCt |
Ubtd1 | mmu-miR-714 | 285 | 307 | CGCUGGCUGG-CCG--GGAGCAGc | | |:||| || ||| ||| ||| | GGGGCCGTCCTGGCGACCT-GTCa |
Ubtd1 | mmu-miR-715 | 537 | 558 | GUG-CGCCCCCACACGUGCCUC | ||: || ||||| ||||| |:| | CATGGCAGGGGTTTGCACAGGG |
Ubtd1 | mmu-miR-718 | 570 | 591 | gcugUGGG-CCGGCCCGCCuuc | |||| ||| |||:|| | tgtaACCCAGGCAGGGTGGggt |
Ubtd1 | mmu-miR-744 | 60 | 80 | CGACAAUCGGGAUCGGGGCGu | ||||| :| || ||:||:|| | GCTGTGGGGCCCAGTCCTGCc |
Ubtd1 | mmu-miR-761 | 110 | 131 | acacagucaaaGUGGGACGACg | |:|||||||| | gcgcctcccacCGCCCTGCTGt |
Ubtd1 | mmu-miR-763 | 597 | 617 | CGGUGACCAAGAA--GGGUCGACC | || |||| || | |||||| || | GC--CTGG-TCATAGCCCAGCGGG |
Ubtd1 | mmu-miR-764-3p | 269 | 295 | UGU-CAA---CGGUGAUACCGG-AGGA | ||| ||| ||||: : |||| |||| | ACAGGTTGGAGCCATGGGGGCCGTCCT |
Ubtd1 | mmu-miR-764-5p | 426 | 444 | UCCUCCUGUACACUCGUGG | |||: | | |||:|| || | AGGGAGCCCGGTGGGCCCC |
Ubtd1 | mmu-miR-770-3p | 605 | 624 | ggUCGAGGUGCAGUCCGGGugc | ||| | :|| :||||| | atAGCCCAGCG--GGGCCCtgt |
Ubtd1 | mmu-miR-93 | 480 | 500 | GAUGGACGUGCUUGUCGUGaaac | || ||||||| |||||| | CTCCCTGCAC--CCAGCACaatc |