DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000152 | mmu-miR-140* | 225743 | Rnf165 | ggCACCA--AGA-UGG--GACACCAu | ||||| ||| ::| ||||||| | guGUGGUGCUCUCGUCAUCUGUGGUg | 2 | 20 | 461 | 486 | [mm9:18:77700585-77700610:-] | 0.6385 | 152 | 7 | -25.61 | -0.4867 |
MIMAT0004544 | mmu-miR-193* | 225743 | Rnf165 | aguagAACGGGCGUUUCUGGGu | | | :| :||||||| | aggggUAGGGUGGGAAGACCCa | 2 | 18 | 178 | 199 | [mm9:18:77700872-77700893:-] | 0.5874 | 145 | 7 | -18.24 | -0.1235 |
MIMAT0004583 | mmu-miR-130b* | 225743 | Rnf165 | ucaucacguugucCCUUUCUCa | |||||||| | uuuucuuuuugguGGAAAGAGg | 2 | 10 | 129 | 150 | [mm9:18:77700921-77700942:-] | 0.5908 | 145 | 7 | -12.51 | -0.4365 |
MIMAT0003167 | mmu-miR-540-3p | 225743 | Rnf165 | gguCCUAGCUGGAG-ACUGGa | | || ||||| ||||| | uguGUAUAUACCUCUUGACCa | 2 | 18 | 365 | 385 | [mm9:18:77700686-77700706:-] | 0.6385 | 125 | 0 | -15.16 | -0.8437 |
MIMAT0003725 | mmu-miR-675-5p | 225743 | Rnf165 | ugacacccgggaaaGGCGUGGu | :|||||| | cgcuauuacugaacUCGCACCa | 2 | 9 | 494 | 515 | [mm9:18:77700556-77700577:-] | 0.6385 | 124 | 6 | -17.92 | -0.2408 |
MIMAT0004822 | mmu-miR-770-5p | 225743 | Rnf165 | gcaccgggucUGUGCACCACGa | ::::||||||| | gaaaaaugucGUGUGUGGUGCu | 2 | 13 | 449 | 470 | [mm9:18:77700601-77700622:-] | 0.6385 | 144 | 7 | -19.87 | -0.7274 |
MIMAT0003739 | mmu-miR-673-5p | 225743 | Rnf165 | gaGGUUCCUGGUCUCGA-CACUc | :|:|||:: |||| |||| | ucUCGAGGGUACUAGCUGGUGAu | 2 | 21 | 313 | 335 | [mm9:18:77700736-77700758:-] | 0.6385 | 124 | 0 | -20.12 | -0.1234 |
MIMAT0004825 | mmu-miR-423-5p | 225743 | Rnf165 | uuUCAGAGCGAGAGACGGGGAGu | || || |: || ||||||| | cuAG-CUGGUGAUCGGCCCCUCa | 2 | 22 | 324 | 345 | [mm9:18:77700726-77700747:-] | 0.6385 | 155 | 7 | -24.46 | -0.3156 |
MIMAT0003467 | mmu-miR-688 | 225743 | Rnf165 | cuUAU-UCAUCAGCGGACGcu | :|| || || |||||| | acGUAGAGAAGAAGCCUGCaa | 3 | 19 | 97 | 117 | [mm9:18:77700954-77700974:-] | 0.7104 | 133 | 0 | -13.98 | -0.1964 |
MIMAT0003470 | mmu-miR-691 | 225743 | Rnf165 | aaaagacGGAGAGAAGUCCUUa | || | | ||||||| | ggaagacCCACCCAUCAGGAAu | 2 | 16 | 190 | 211 | [mm9:18:77700860-77700881:-] | 0.5874 | 151 | 7 | -13.07 | -0.1934 |
MIMAT0003481 | mmu-miR-695 | 225743 | Rnf165 | aaGUCAGUGGAU-AC-GGGUUAGa | || || | | | ||||||| | acCAACCAACGACAGCCCCAAUCu | 2 | 21 | 580 | 603 | [mm9:18:77700468-77700491:-] | 0.5726 | 142 | 7 | -14.02 | -0.4741 |
MIMAT0003485 | mmu-miR-455* | 225743 | Rnf165 | gcUACAUCAGGUUUCCGUGUAu | | | || |:: | |||||| | agAAGAAGCCUGCAAGCACAUu | 2 | 21 | 103 | 124 | [mm9:18:77700947-77700968:-] | 0.7104 | 128 | 6 | -10.73 | -0.1342 |
MIMAT0003494 | mmu-miR-704 | 225743 | Rnf165 | gauccuCGUCUCGUGUACAGa | |::| | ||||||| | ucaucuGUGGUGGACAUGUCg | 2 | 16 | 475 | 495 | [mm9:18:77700576-77700596:-] | 0.6385 | 151 | 7 | -13.30 | -0.3268 |
MIMAT0003499 | mmu-miR-709 | 225743 | Rnf165 | aggaggacggaGACGGAGg | ||||||| | aggaauggugaCUGCCUCa | 2 | 9 | 206 | 224 | [mm9:18:77700847-77700865:-] | 0.6385 | 140 | 7 | -14.83 | -0.6328 |
MIMAT0003781 | mmu-miR-676* | 225743 | Rnf165 | cguucaggauuccaaCAUCUCa | |||||| | ucugagccauuugacGUAGAGa | 2 | 8 | 84 | 105 | [mm9:18:77700966-77700987:-] | 0.7104 | 120 | 6 | -11.06 | -0.1819 |
MIMAT0004839 | mmu-miR-743b-5p | 225743 | Rnf165 | acUACCUGUGGUCA-GACUUGu | || | |:|:| | |||||| | acAU-GUCGCUAUUACUGAACu | 2 | 20 | 488 | 508 | [mm9:18:77700563-77700583:-] | 0.6385 | 121 | 6 | -13.65 | -0.5173 |
MIMAT0004863 | mmu-miR-220 | 225743 | Rnf165 | uuCAC-AGA-CUGU-GACACCACc | ||| ||| | || |||||||| | ugGUGCUCUCGUCAUCUGUGGUGg | 2 | 20 | 464 | 487 | [mm9:18:77700584-77700607:-] | 0.6385 | 160 | 7 | -26.80 | -0.3301 |
MIMAT0004863 | mmu-miR-220 | 225743 | Rnf165 | uucacagACUGUG-ACACCACc | || |:: ||||||| | agaaaaaUGUCGUGUGUGGUGc | 2 | 15 | 448 | 469 | [mm9:18:77700602-77700623:-] | 0.6385 | 145 | 7 | -14.94 | -0.3742 |
MIMAT0004882 | mmu-miR-466f-3p | 225743 | Rnf165 | cacACAUACACACACACAUAc | | |: | | ||||||| | accUUUGAGGGAUUGUGUAUa | 2 | 19 | 352 | 372 | [mm9:18:77700699-77700719:-] | 0.6385 | 146 | 7 | -8.12 | -1.0221 |
MIMAT0004898 | mmu-miR-654-3p | 225743 | Rnf165 | uucCA-CUACCAGUC-GUCU-GUAu | || ||||| ||| |||| ||| | ucuGUGGAUGG-CAGCCAGAGCAUg | 2 | 20 | 416 | 439 | [mm9:18:77700632-77700655:-] | 0.6385 | 127 | 0 | -20.36 | -0.4794 |
MIMAT0005839 | mmu-miR-669f | 225743 | Rnf165 | uaUGCACACACAC--AUACAUAUAc | || | || | | |:||||||| | ugACCUUUGAGGGAUUGUGUAUAUa | 2 | 22 | 350 | 374 | [mm9:18:77700697-77700721:-] | 0.6385 | 156 | 7 | -8.85 | -0.6565 |
MIMAT0005846 | mmu-miR-467f | 225743 | Rnf165 | acaucCACACACACACAUAUa | | | | |||||||| | ccuuuGAGGGAUUGUGUAUAu | 2 | 17 | 353 | 373 | [mm9:18:77700698-77700718:-] | 0.6385 | 148 | 7 | -13.10 | -0.6537 |
MIMAT0005852 | mmu-miR-1194 | 225743 | Rnf165 | uccUAGAUCGUCAAUGAGUAAg | | | | :| || |||||| | cgcACCAAAUA-UUUCUCAUUg | 2 | 20 | 509 | 529 | [mm9:18:77700542-77700562:-] | 0.6385 | 121 | 6 | -5.21 | -0.1009 |
MIMAT0007868 | mmu-miR-1903 | 225743 | Rnf165 | acAGAGUCCUUCUUCUUCUUCc | |:| | | || |||||||| | caUUUGACGUAG-AGAAGAAGc | 2 | 21 | 91 | 111 | [mm9:18:77700960-77700980:-] | 0.7104 | 158 | 7 | -12.93 | -0.8335 |
MIMAT0007875 | mmu-miR-1898 | 225743 | Rnf165 | cuaggggacacuuGGAACUGGa | :||||||| | uuguguauauaccUCUUGACCa | 2 | 10 | 364 | 385 | [mm9:18:77700686-77700707:-] | 0.6385 | 141 | 7 | -15.68 | -1.0248 |
MIMAT0009417 | mmu-miR-1950 | 225743 | Rnf165 | acugguAUAGGA-AUCUA-CGUCu | |||:|| |:||| |||| | ucuagcUAUUCUGUGGAUGGCAGc | 2 | 17 | 407 | 430 | [mm9:18:77700641-77700664:-] | 0.6385 | 127 | 0 | -14.99 | -0.3404 |
MIMAT0009441 | mmu-miR-1968 | 225743 | Rnf165 | ucaggugguaggaauuGUCGACGu | ||||||| | cgggaagggggcgcccCAGCUGCu | 2 | 9 | 274 | 297 | [mm9:18:77700774-77700797:-] | 0.6385 | 140 | 7 | -15.68 | -0.1064 |
MIMAT0009442 | mmu-miR-1969 | 225743 | Rnf165 | uggguacaauuucagaGGUAGAa | |||||| | gacagccccaaucuucCCAUCUu | 2 | 8 | 590 | 612 | [mm9:18:77700459-77700481:-] | 0.5726 | 120 | 6 | -14.49 | -0.1103 |
MIMAT0009444 | mmu-miR-1970 | 225743 | Rnf165 | guUUCGGAUAGGGGUCA-CUGUGu | :|| ||| ||||| ||||| | agGAG-CUA--GCCAGUGGACACc | 2 | 22 | 4 | 24 | [mm9:18:77701047-77701067:-] | 0.5312 | 120 | 0 | -19.18 | -0.1055 |
MIMAT0000127 | mmu-miR-29b | 225743 | Rnf165 | uugugacUAAAG--UUUACCACGAu | || || : :||||||| | aagaaaaAUGUCGUGUGUGGUGCUc | 2 | 17 | 447 | 471 | [mm9:18:77700600-77700624:-] | 0.6385 | 143 | 7 | -14.13 | -0.3633 |
MIMAT0000127 | mmu-miR-29b | 225743 | Rnf165 | uuGUGACUAAAGUUUACCAC-GAu | ||| || :||||||| || | ccCACCCAUCAGGAAUGGUGACUg | 2 | 22 | 196 | 219 | [mm9:18:77700852-77700875:-] | 0.6385 | 125 | 0 | -14.28 | -0.4231 |
MIMAT0000164 | mmu-miR-154 | 225743 | Rnf165 | gcUUCCGUUGUGCCUAU-UGGAu | :||| | :::| ||| |||| | uuGAGGGAUUGUGUAUAUACCUc | 2 | 21 | 356 | 378 | [mm9:18:77700693-77700715:-] | 0.6385 | 124 | 0 | -15.65 | -0.9878 |
MIMAT0000219 | mmu-miR-24 | 225743 | Rnf165 | gacaaggacgacuuGACUCGGu | ||||||| | ccaaacuuugccuuCUGAGCCa | 2 | 9 | 71 | 92 | [mm9:18:77700979-77701000:-] | 0.6724 | 140 | 7 | -19.19 | -1.1946 |
MIMAT0000235 | mmu-miR-202-3p | 225743 | Rnf165 | agaaggguACGCG-AUAUGGAGa | ||:|: |||||||| | ugagggauUGUGUAUAUACCUCu | 2 | 15 | 357 | 379 | [mm9:18:77700692-77700714:-] | 0.6385 | 153 | 7 | -17.61 | -1.0813 |
MIMAT0000535 | mmu-miR-29a | 225743 | Rnf165 | auuggcUAAAGU-C-UACCACGAu | || ||: | :||||||| | agaaaaAUGUCGUGUGUGGUGCUc | 2 | 17 | 448 | 471 | [mm9:18:77700600-77700623:-] | 0.6385 | 146 | 7 | -13.38 | -0.3633 |
MIMAT0000535 | mmu-miR-29a | 225743 | Rnf165 | auUGGCUAAAGUCUACCAC-GAu | ||| || : |||||| || | ccACCCAUCAGGAAUGGUGACUg | 2 | 21 | 197 | 219 | [mm9:18:77700852-77700874:-] | 0.6385 | 120 | 0 | -16.84 | -0.4231 |
MIMAT0000536 | mmu-miR-29c | 225743 | Rnf165 | auuggcUAAAG--UUUACCACGAu | || || : :||||||| | agaaaaAUGUCGUGUGUGGUGCUc | 2 | 17 | 448 | 471 | [mm9:18:77700600-77700623:-] | 0.6385 | 143 | 7 | -14.13 | -0.3633 |
MIMAT0000536 | mmu-miR-29c | 225743 | Rnf165 | auUGGCUAAAGUUUACCAC-GAu | ||| || :||||||| || | ccACCCAUCAGGAAUGGUGACUg | 2 | 21 | 197 | 219 | [mm9:18:77700852-77700874:-] | 0.6385 | 128 | 0 | -14.89 | -0.4231 |
MIMAT0000663 | mmu-miR-218 | 225743 | Rnf165 | uguaccaaucuaGUUCGUGUu | |||||||| | agaagaagccugCAAGCACAu | 2 | 10 | 103 | 123 | [mm9:18:77700948-77700968:-] | 0.7104 | 145 | 7 | -12.35 | -0.9060 |
MIMAT0000669 | mmu-miR-221 | 225743 | Rnf165 | cuuuggGUC-GUCUGUUAC-AUCGa | ||| |||| ||| |||| | ggauggCAGCCAGAGCAUGUUAGCu | 2 | 18 | 421 | 445 | [mm9:18:77700626-77700650:-] | 0.6385 | 124 | 0 | -17.15 | -0.9075 |
MIMAT0000670 | mmu-miR-222 | 225743 | Rnf165 | uggGUCAUCGGUC---UAC-AUCGa | ::| |||||| ||| |||| | ggaUGGCAGCCAGAGCAUGUUAGCu | 2 | 19 | 421 | 445 | [mm9:18:77700626-77700650:-] | 0.6385 | 121 | 0 | -17.46 | -0.9075 |
MIMAT0001418 | mmu-miR-431 | 225743 | Rnf165 | acguacugcCGGACGUUC-UGu | ||||||||| || | agagaagaaGCCUGCAAGCACa | 2 | 13 | 101 | 122 | [mm9:18:77700949-77700970:-] | 0.7104 | 124 | 0 | -21.10 | -1.1856 |
MIMAT0003169 | mmu-miR-539 | 225743 | Rnf165 | ugUGUGGUUCCUAUUAAAGAGg | :|||||| || ||||||| | ucGCACCAA--AU-AUUUCUCa | 2 | 21 | 508 | 526 | [mm9:18:77700545-77700563:-] | 0.6385 | 159 | 7 | -20.01 | -1.2010 |