DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Traf5 mmu-miR-7a beg:84 end:97 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& || ||||||| &5' ------------CTTGTCTTCC- 3' Traf5 mmu-miR-7b beg:87 end:97 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||||||| &5' ---------------GTCTTCC- 3' Traf5 mmu-miR-425 beg:107 end:121 pic:3' AGTTGCCCTCACTAGCACAGTAA 5'& |||| ||||||| &5' ----------TGAT-GTGTCAT- 3' Traf5 mcmv-miR-m21-1 beg:34 end:53 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||. || .| ||||||.|. &5' -GGTGTG-GC-TGTCCCTTG- 3' Traf5 mmu-let-7a beg:89 end:103 pic:3' TTGATATGTTGGATGATGGAGT 5'& |.| ||.|||| &5' ----------CTTCCTGCCTC- 3' Traf5 mmu-let-7b beg:89 end:103 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& |.| ||.|||| &5' ----------CTTCCTGCCTC- 3' Traf5 mmu-let-7c beg:89 end:103 pic:3' TTGGTATGTTGGATGATGGAGT 5'& |.| ||.|||| &5' ----------CTTCCTGCCTC- 3' Traf5 mmu-let-7d beg:86 end:103 pic:3' TTGATACGTTGGATGATGGAGA 5'& ||. |.| ||.|||| &5' -----TGT--CTTCCTGCCTC- 3' Traf5 mmu-let-7e beg:89 end:103 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||||.|||| &5' ----------CTTCCTGCCTC- 3' Traf5 mmu-let-7f beg:87 end:103 pic:3' TTGATATGTTAGAT-GATGGAGT 5'& .||| ||.|||| &5' ---------GTCTTCCTGCCTC- 3' Traf5 mmu-let-7g beg:93 end:103 pic:3' TTGACATGTTTGATGATGGAGT 5'& ||.|||| &5' --------------CTGCCTC- 3' Traf5 mmu-miR-143 beg:104 end:124 pic:3' CTC-GATGTCACGAAGTAGAGT 5'& | ||. ||. ||||||. &5' --GTCTGA--TGTGTCATCTT- 3' Traf5 mmu-miR-183 beg:101 end:121 pic:3' TCACTTAAGATGGTCACGGTAT 5'& || |||. |||.||| &5' ---GATGTCTGAT-GTGTCAT- 3' Traf5 mmu-miR-1839-5p beg:108 end:132 pic:3' GTTCTGGACA--AGATAGATGGAA 5'& ||. ||| ||| |.||.||| &5' ---GATGTGTCATCTTTTTATCTT 3' Traf5 mmu-miR-1961 beg:83 end:103 pic:3' AAGATT-GAT-GATGGAGT 5'& |||| || ||.|||| &5' TTCTTGTCTTCCTGCCTC- 3' Traf5 mmu-miR-1967 beg:115 end:140 pic:3' CGTAGAAGAG-GGGTCCTAGGAGT 5'& ||||||.|. .|. |||||||. &5' -CATCTTTTTATCTTGGATCCTT- 3' Traf5 mmu-miR-21star beg:157 end:179 pic:3' CTGTCGGGTAGCT----GACGACAAC 5'& |.| |.|| .||||||| &5' -----CTC-TTGAAATATTGCTGTT- 3' Traf5 mmu-miR-296-3p beg:43 end:66 pic:3' CCTCTCGGAGGTGG-GTTGGGAG 5'& | |||. . | ||.||||| &5' ---GTCCCTTGGGCGCAGCCCTC 3' Traf5 mmu-miR-361 beg:94 end:115 pic:3' CATGGGGACCTCTAAGACTATT 5'& |.||.| || ||||||. &5' -TGCCTCC-GATG-TCTGATG- 3' Traf5 mmu-miR-465a-3p beg:126 end:148 pic:3' AGATGAATCTTTCC-GGGACTAG 5'& |||.|| |||||.|. &5' ----CTTGGATCCTTCCCTGGTT 3' Traf5 mmu-miR-465b-3p beg:126 end:148 pic:3' AGATGAATCTTTCC-GGGACTAG 5'& |||.|| |||||.|. &5' ----CTTGGATCCTTCCCTGGTT 3' Traf5 mmu-miR-465c-3p beg:126 end:148 pic:3' AGATGAATCTTTCC-GGGACTAG 5'& |||.|| |||||.|. &5' ----CTTGGATCCTTCCCTGGTT 3' Traf5 mmu-miR-489 beg:100 end:121 pic:3' CGACGG-TATATACACCACAGTAA 5'& || ||.| || ||||||| &5' ----CCGATGTCTGATGTGTCAT- 3' Traf5 mmu-miR-511 beg:23 end:42 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| || ||||||..| &5' -----GCACAGGAAAAGGTGT 3' Traf5 mmu-miR-691 beg:16 end:35 pic:3' AAAAGACGGAGAGAA--GTCCTTA 5'& |.|||| |||||| &5' -------CTTCTCAGCACAGGAA- 3' Traf5 mmu-miR-709 beg:82 end:104 pic:3' AGGAGGACGGA--GACGGAGG 5'& .||.||.|| |||||||| &5' --TTCTTGTCTTCCTGCCTCC 3' Traf5 mmu-miR-883a-5p beg:18 end:29 pic:3' CATTGACGATGAAGAGAGTCGT 5'& .|||||||| &5' -------------TTCTCAGCA 3' Traf5 mmu-miR-98 beg:89 end:103 pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||| ||.|||| &5' ----------CTTCCTGCCTC- 3' Traf5 mmu-miR-1894-3p beg:41 end:54 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& || ||||||| &5' -----------CTGTCCCTTG- 3' Traf5 mmu-miR-455 beg:57 end:73 pic:3' CACATATACGGGC-ACCTGACG 5'& |||| ||||||| &5' --------GCCCTCTGGACTG- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Traf5 RAID00033470 mmu-miR-322-5p miRNA MIMAT0000548 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00091138 mmu-miR-466l-3p miRNA MIMAT0005830 Traf5 mRNA 22033 Prediction 0.2202 Traf5 RAID00092179 mmu-miR-18b-5p miRNA MIMAT0004858 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00155555 mmu-let-7b-5p miRNA MIMAT0000522 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00198773 mmu-miR-346-5p miRNA MIMAT0000597 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00269212 mmu-miR-7a-5p miRNA MIMAT0000677 Traf5 mRNA 22033 Prediction 0.2202 Traf5 RAID00304917 mmu-miR-16-5p miRNA MIMAT0000527 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00373280 mmu-miR-425-5p miRNA MIMAT0004750 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00445537 mmu-miR-338-3p miRNA MIMAT0000582 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00446869 mmu-miR-98-5p miRNA MIMAT0000545 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00545076 mmu-miR-21a-3p miRNA MIMAT0004628 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00586087 mmu-miR-758-3p miRNA MIMAT0003889 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00742968 mmu-miR-410-3p miRNA MIMAT0001091 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00978268 mmu-miR-137-3p miRNA MIMAT0000149 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID00988296 mmu-miR-15b-5p miRNA MIMAT0000124 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01018746 mmu-let-7g-5p miRNA MIMAT0000121 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01182026 mmu-miR-299a-3p miRNA MIMAT0004577 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01194221 mmu-miR-134-5p miRNA MIMAT0000146 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01206326 mmu-miR-7679-3p miRNA MIMAT0029873 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01218976 mmu-miR-18a-5p miRNA MIMAT0000528 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01404548 mmu-let-7f-5p miRNA MIMAT0000525 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01416936 mmu-miR-340-5p miRNA MIMAT0004651 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01529653 mmu-miR-489-3p miRNA MIMAT0003112 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01589056 mmu-miR-448-3p miRNA MIMAT0001533 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01618504 mmu-miR-154-5p miRNA MIMAT0000164 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01676329 mmu-miR-381-3p miRNA MIMAT0000746 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01888281 mmu-miR-592-5p miRNA MIMAT0003730 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01911339 mmu-let-7c-5p miRNA MIMAT0000523 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID01986582 mmu-miR-15a-5p miRNA MIMAT0000526 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02034053 mmu-miR-302b-3p miRNA MIMAT0003374 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02042343 mmu-miR-7b-5p miRNA MIMAT0000678 Traf5 mRNA 22033 Prediction 0.2202 Traf5 RAID02144138 mmu-miR-129-5p miRNA MIMAT0000209 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02167691 mmu-miR-7226-5p miRNA MIMAT0028420 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02169971 mmu-miR-335-5p miRNA MIMAT0000766 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02235668 mmu-miR-196a-5p miRNA MIMAT0000518 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02238060 mmu-miR-125a-5p miRNA MIMAT0000135 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02259600 mmu-miR-203-3p miRNA MIMAT0000236 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02262261 mmu-miR-195a-5p miRNA MIMAT0000225 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02456640 mmu-let-7a-5p miRNA MIMAT0000521 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02510163 mmu-miR-351-5p miRNA MIMAT0000609 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02572817 mmu-miR-497a-5p miRNA MIMAT0003453 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02643885 mmu-miR-653-5p miRNA MIMAT0004943 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02802733 mmu-miR-302a-3p miRNA MIMAT0000380 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02837631 mmu-let-7i-5p miRNA MIMAT0000122 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02893908 mmu-miR-374b-5p miRNA MIMAT0003727 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID02920743 mmu-let-7d-5p miRNA MIMAT0000383 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03185031 mmu-miR-8116 miRNA MIMAT0031422 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03403903 mmu-miR-590-3p miRNA MIMAT0004896 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03431616 mmu-miR-196b-5p miRNA MIMAT0001081 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03640401 mmu-miR-370-3p miRNA MIMAT0001095 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03648510 mmu-miR-218-5p miRNA MIMAT0000663 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03661376 mmu-miR-194-5p miRNA MIMAT0000224 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03747592 mmu-let-7e-5p miRNA MIMAT0000524 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID03907302 mmu-miR-190b-5p miRNA MIMAT0004852 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID04023675 mmu-miR-125b-5p miRNA MIMAT0000136 Traf5 mRNA 22033 Prediction 0.1828 Traf5 RAID05064629 G730013B05Rik lncRNA 619312 Traf5 protein 22033 Microarray//RNA-seq 0.6606