DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0003473 mmu-miR-133a* 22030 Traf2 uaaaccaagGUAAAA-UGGUCg |||||| ||||| ucuaguggaCAUUUUAACCAGg 2 13 1310 1331 [mm9:2:25373599-25373620:-] 0.5012 124 0 -16.23 -0.7023 MIMAT0000152 mmu-miR-140* 22030 Traf2 ggcaccaAGAUGGGACAC-CAu |||::|||||| || cuuucucUCUGUCCUGUGAGUu 2 15 1123 1144 [mm9:2:25373786-25373807:-] 0.5012 126 0 -18.76 -0.1266 MIMAT0000234 mmu-miR-201 22030 Traf2 uucuuGUU-ACGGAAUGACUCAu ||: || | ||||||| gccuuCAGCUGGCAAACUGAGUu 2 18 160 182 [mm9:2:25374748-25374770:-] 0.5161 148 7 -14.01 -0.1447 MIMAT0000240 mmu-miR-207 22030 Traf2 cucccuccucucggUCCUCUUCg :||||||| gguggccuguauggGGGAGAAGu 2 10 503 525 [mm9:2:25374405-25374427:-] 0.5012 141 7 -17.03 -0.1469 MIMAT0000240 mmu-miR-207 22030 Traf2 cucccucCUCUCGGUCC-UCUUCg || || |||| ||||| ucacacaGAAAGGCAGGAAGAAGc 2 17 127 150 [mm9:2:25374780-25374803:-] 0.4909 128 0 -20.03 -0.1107 MIMAT0004582 mmu-miR-106b* 22030 Traf2 cguCGUUCAUGGGUGUC-ACGCc |||| |: | ||| |||| gcuGCAAACAUGCCCAGCUGCGa 2 20 893 915 [mm9:2:25374015-25374037:-] 0.5000 123 0 -18.22 -0.1057 MIMAT0004635 mmu-miR-92a* 22030 Traf2 caUUAC-GGUGGUUAGGGGUGGa |:|| |:: | |||||||| aaAGUGACUGGCCUUCCCCACCc 2 21 349 371 [mm9:2:25374559-25374581:-] 0.5062 155 7 -23.32 -0.1979 MIMAT0000569 mmu-miR-330* 22030 Traf2 agAGACG--UCCGGGA--CACGAAACg ||| | || ::|| ||||||| uuUCUACUUAGUUUCUUCCUGCUUUGu 2 22 1381 1407 [mm9:2:25373523-25373549:-] 0.5012 147 7 -16.31 -0.4916 MIMAT0004663 mmu-miR-200c* 22030 Traf2 ggUUUGUGACGAC-CCAUUCUGc |||||:| :|| |||||| guAAACAUUUUUGAUCUAAGACu 2 21 1406 1428 [mm9:2:25373502-25373524:-] 0.5012 135 6 -15.11 -0.1318 MIMAT0004666 mmu-miR-33* 22030 Traf2 cacuacGUGACACCUUUGUAAc ::|| || ||||||| ucuuccUGCUUUGUAAACAUUu 2 17 1394 1415 [mm9:2:25373515-25373536:-] 0.5012 156 7 -9.34 -0.6175 MIMAT0000672 mmu-miR-199b* 22030 Traf2 cuuguccaUCAGAUUUGUGACCc | |:| ||||||| cuucucugACUUUUCACACUGGa 2 16 992 1014 [mm9:2:25373916-25373938:-] 0.5006 147 7 -12.00 -0.6505 MIMAT0002111 mmu-miR-470 22030 Traf2 ugAGUGGUCACGGUCAG-GUUCUu || |||| | |||| ||||| ccUCUCCAGAGAGAGUCUCAAGAg 2 22 312 335 [mm9:2:25374595-25374618:-] 0.5115 137 0 -25.89 -0.1082 MIMAT0004760 mmu-miR-470* 22030 Traf2 agAAGAGUCUUUCC---AUGACCAa ||:||| | || ||||||| acUUUUCACACUGGAUUUACUGGUu 2 21 1000 1024 [mm9:2:25373906-25373930:-] 0.5006 155 7 -20.53 -0.6542 MIMAT0003733 mmu-miR-665 22030 Traf2 uccCUGGAGUC-GGAG-GACCa ||| | :| |||| |||| ugaGACAUAGGCCCUCACUGGa 2 18 449 470 [mm9:2:25374460-25374481:-] 0.4998 120 0 -18.54 -0.1367 MIMAT0015219 mmu-miR-3475 22030 Traf2 aaguuugguacaCGGAGGUCu |||||||| aggcaggaagaaGCCUCCAGu 2 10 137 157 [mm9:2:25374773-25374793:-] 0.4909 145 7 -19.87 -0.1008 MIMAT0004823 mmu-miR-666-3p 22030 Traf2 ucguccgcuagugCGACGUCGg |||||||| gagagucucaagaGCUGCAGCa 2 10 322 343 [mm9:2:25374587-25374608:-] 0.5115 145 7 -18.76 -0.1402 MIMAT0003739 mmu-miR-673-5p 22030 Traf2 gaGGUUCCUGGUC-U-CGACACUc |||: :| || | ||||||| gcCCAGCUGCGAGCAUGCUGUGAu 2 21 904 927 [mm9:2:25374003-25374026:-] 0.5003 150 7 -18.65 -0.2958 MIMAT0003740 mmu-miR-674 22030 Traf2 auguggUGAGGGUAGAGUCACg | | || ||||||| gcuaagAAUAGCAGCUCAGUGa 2 17 9 30 [mm9:2:25374900-25374921:-] 0.4535 148 7 -14.91 -0.5746 MIMAT0003449 mmu-miR-488* 22030 Traf2 aacuCUCACGAUAA-UAGACCc ||||| |:|| |||||| ugcuGAGUGGUGUUCAUCUGGc 2 18 547 568 [mm9:2:25374362-25374383:-] 0.5012 137 6 -19.62 -0.1223 MIMAT0003491 mmu-miR-701 22030 Traf2 agguagauaaaGUCGCCGAUu :|||||||| uggaaaagaggUAGCGGCUAc 2 11 379 399 [mm9:2:25374531-25374551:-] 0.5009 146 7 -14.87 -0.2336 MIMAT0003492 mmu-miR-702 22030 Traf2 cucgccCCAUUUC-CCACCCGu || || | ||||||| acaauaGGAAAUGUGGUGGGCa 2 16 759 780 [mm9:2:25374150-25374171:-] 0.5008 150 7 -19.66 -0.3961 MIMAT0003500 mmu-miR-710 22030 Traf2 gaguugAGAGGGGU-UCUG-AACc |:||:||| |||| ||| cuaggaUUUCUCCAUAGACAUUGc 2 17 1341 1364 [mm9:2:25373566-25373589:-] 0.5012 127 0 -17.37 -0.3979 MIMAT0003507 mmu-miR-500 22030 Traf2 acUUGG--GAACGGGU-CCACGUAa |||: || | | ||||||| guAACUUGCUGGAGAAGGGUGCAUc 2 21 1092 1116 [mm9:2:25373814-25373838:-] 0.5012 142 7 -18.33 -0.1284 MIMAT0003509 mmu-miR-501-3p 22030 Traf2 guuuaggaacgggCCCACGUAa |||||||| acuugcuggagaaGGGUGCAUc 2 10 1095 1116 [mm9:2:25373814-25373835:-] 0.5012 145 7 -20.88 -0.1284 MIMAT0004838 mmu-miR-742* 22030 Traf2 acuaaucGUUGGUACACUCAu | ::| ||||||| uuucucuCUGUCCUGUGAGUu 2 15 1124 1144 [mm9:2:25373786-25373806:-] 0.5012 146 7 -12.92 -0.1160 MIMAT0004845 mmu-miR-881* 22030 Traf2 ucUACACUGACAAUAGAGAGAc || | ::| | ||||||| gcAUCUUGUUUCUUUCUCUCUg 2 21 1112 1133 [mm9:2:25373797-25373818:-] 0.5012 152 7 -17.05 -0.2312 MIMAT0004845 mmu-miR-881* 22030 Traf2 ucuacacuGACAAUAGA-GAGAc ||| |:||| |||| gaaagcucCUGCUGUCUCCUCUg 2 15 247 269 [mm9:2:25374661-25374683:-] 0.5115 122 0 -16.91 -0.2441 MIMAT0004863 mmu-miR-220 22030 Traf2 uucacagaCUGUGACACCACc |: | ||||||| gcacaauaGGAAAUGUGGUGg 2 14 757 777 [mm9:2:25374153-25374173:-] 0.5008 145 7 -18.08 -0.2436 MIMAT0004890 mmu-miR-509-5p 22030 Traf2 uacUAACGGUGUA----AGACCUCAu ||| ::|||| |||||||| agcAUU-UUACAUGGGCUCUGGAGUa 2 20 1265 1289 [mm9:2:25373641-25373665:-] 0.5012 152 7 -18.30 -0.4293 MIMAT0005847 mmu-miR-1190 22030 Traf2 cugucUCCCCUUGGAGUCGACu || |: |:||||||| ccuccAGUUGGCCUUCAGCUGg 2 18 150 171 [mm9:2:25374759-25374780:-] 0.5161 153 7 -22.40 -0.1043 MIMAT0005849 mmu-miR-1191 22030 Traf2 aucccgauguaucAUUCUGAc ||||||| aacauuuuugaucUAAGACU- 2 9 1409 1428 [mm9:2:25373502-25373521:-] 0.5012 140 7 -6.87 -1.1940 MIMAT0005852 mmu-miR-1194 22030 Traf2 uccuAGAUCGUCAAUGAGUAAg |||: | ||||||||| cacuUCUGCC--UUACUCAUUc 2 19 606 625 [mm9:2:25374305-25374324:-] 0.5003 155 7 -15.90 -0.2969 MIMAT0007876 mmu-miR-1907 22030 Traf2 ugGAGGUCUAGGAGACG-ACGAg :| || || :| ||| |||| ucUUACACAUGUUGUGCUUGCUc 2 21 1202 1224 [mm9:2:25373706-25373728:-] 0.5012 124 0 -17.84 -0.1870 MIMAT0007877 mmu-miR-1894-5p 22030 Traf2 ucUCCGUCCACCAU--CCCCUCUc |||::| ||| ||||||| ccAGGUGGCCUGUAUGGGGGAGAa 2 21 500 523 [mm9:2:25374407-25374430:-] 0.5012 155 7 -28.07 -0.2470 MIMAT0009392 mmu-miR-1929 22030 Traf2 gaGACGAGAUAUU--UCAGG-AUCUu :||||||| :| ||| |||| uaUUGCUCUAGGAUUUCUCCAUAGAc 2 22 1334 1359 [mm9:2:25373571-25373596:-] 0.5012 124 0 -17.13 -0.2524 MIMAT0009406 mmu-miR-1941-3p 22030 Traf2 uacccucuaugacGAUUCUac |||||| aaacauuuuugauCUAAGAcu 3 9 1408 1428 [mm9:2:25373502-25373522:-] 0.5012 120 0 -5.42 -0.1091 MIMAT0009425 mmu-miR-1954 22030 Traf2 uuguccCA-GAGUGAGACGUCa || ||::|||||||| cauguuGUGCUUGCUCUGCAGa 2 16 1209 1230 [mm9:2:25373700-25373721:-] 0.5012 158 7 -18.86 -0.2131 MIMAT0009426 mmu-miR-1955 22030 Traf2 uuUUCGACGUCACGUAGGAC-CCUGa |||:||:| | | :||| |||| guAAGUUGUACUUC--UCUGAGGACu 2 24 1287 1310 [mm9:2:25373620-25373643:-] 0.5012 128 0 -20.56 -0.1516 MIMAT0009444 mmu-miR-1970 22030 Traf2 guuUCGGA--UAGGGGUCACU-GUGu | ||| | |||||||| ||| uauAUCCUUCAAGCCCAGUGACCACu 2 21 643 668 [mm9:2:25374262-25374287:-] 0.5008 127 0 -23.41 -0.1259 MIMAT0011222 mmu-miR-2146 22030 Traf2 guguaccuuggGAAGAGGUg :||||||| uugcucuaggaUUUCUCCAu 2 10 1336 1355 [mm9:2:25373575-25373594:-] 0.5012 141 7 -14.95 -0.4791 MIMAT0012771 mmu-miR-432 22030 Traf2 gaCGGGUGACUAGAUGAGGU-UCu ||:| |||:| ||||| || uuGCUCUAGGAUUU-CUCCAUAGa 2 22 1336 1358 [mm9:2:25373572-25373594:-] 0.5012 123 0 -22.74 -0.3207 MIMAT0015640 mmu-miR-3470a 22030 Traf2 ggucggaccagaUGUUUCACu :||||||| gcugcagcaggaGCAAAGUGa 2 10 335 355 [mm9:2:25374575-25374595:-] 0.5115 141 7 -20.05 -0.1358 MIMAT0000124 mmu-miR-15b 22030 Traf2 acAUUUGGUACUACACG-ACGAu || | |||| ||||| |||| cuUACA-CAUGUUGUGCUUGCUc 2 21 1203 1224 [mm9:2:25373706-25373727:-] 0.5012 134 0 -17.87 -0.1870 MIMAT0000229 mmu-miR-199a-5p 22030 Traf2 cuuguccaUCAGACUUGUGACCc | |:| ||||||| cuucucugACUUUUCACACUGGa 2 16 992 1014 [mm9:2:25373916-25373938:-] 0.5006 147 7 -14.47 -0.6505 MIMAT0000513 mmu-miR-19b 22030 Traf2 agucaaAACGUACCUAAACGUGu |||| ||| ||||||| ggauccUUGCCUGG-UUUGCACa 2 18 740 761 [mm9:2:25374169-25374190:-] 0.5008 163 7 -18.53 -0.1470 MIMAT0000526 mmu-miR-15a 22030 Traf2 guguuUG-GUAAUACACG-ACGAu || ||| ||||| |||| cucuuACACAUGUUGUGCUUGCUc 2 18 1201 1224 [mm9:2:25373706-25373729:-] 0.5012 124 0 -15.48 -0.1887 MIMAT0000538 mmu-miR-31 22030 Traf2 gucGAUACGGUCGUA-GAACGGa :|:| :||| || |||||| ccuUUGUCUCAGGAUCCUUGCCu 2 20 729 751 [mm9:2:25374179-25374201:-] 0.5008 131 6 -20.20 -0.1344 MIMAT0000548 mmu-miR-322 22030 Traf2 agguUUUGUACUUAACG-ACGAc | ||||| ||| |||| ucuuACACAUGUUGUGCUUGCUc 2 19 1202 1224 [mm9:2:25373706-25373728:-] 0.5012 122 0 -14.31 -0.1835 MIMAT0000651 mmu-miR-19a 22030 Traf2 agucaaAACGUAUCUAAACGUGu |||| | |:||||||| ggauccUUGCCU-GGUUUGCACa 2 18 740 761 [mm9:2:25374169-25374190:-] 0.5008 159 7 -17.25 -0.1584 MIMAT0000661 mmu-miR-214 22030 Traf2 ugACGGACAGA-CACGGACGACa ||:: ||| | ||||||| ggUGUUCAUCUGGCUCCUGCUGu 2 21 555 577 [mm9:2:25374353-25374375:-] 0.5012 151 7 -22.64 -0.1704 MIMAT0000661 mmu-miR-214 22030 Traf2 ugacggacagacacGGACGACa ||||||| ccaauaggaaagcuCCUGCUGu 2 9 240 261 [mm9:2:25374669-25374690:-] 0.5115 140 7 -14.62 -0.1583 MIMAT0001095 mmu-miR-370 22030 Traf2 ugguccaaggUGGGGUCGUCCg :|: ||||||| agucucaagaGCUGCAGCAGGa 2 13 325 346 [mm9:2:25374584-25374605:-] 0.5115 144 7 -18.25 -0.2779 MIMAT0003169 mmu-miR-539 22030 Traf2 ugugugguuccUAUUAAAGAGg | :||||||| auuauugcucuAGGAUUUCUCc 2 12 1332 1353 [mm9:2:25373577-25373598:-] 0.5012 143 7 -14.85 -0.1423 MIMAT0003893 mmu-miR-761 22030 Traf2 acACAGUCAAAGUG-GGACGACg |||: | | :| ||||||| ggUGUUCAUCUGGCUCCUGCUGu 2 21 555 577 [mm9:2:25374353-25374375:-] 0.5012 151 7 -20.70 -0.1753 MIMAT0003893 mmu-miR-761 22030 Traf2 acacagucaaaguGGGACGACg :||||||| ccaauaggaaagcUCCUGCUGu 2 10 240 261 [mm9:2:25374669-25374690:-] 0.5115 141 7 -17.97 -0.1568 MIMAT0003453 mmu-miR-497 22030 Traf2 auguuUG-GUGUCACACG-ACGAc || ||:: ||||| |||| cucuuACACAUGUUGUGCUUGCUc 2 18 1201 1224 [mm9:2:25373706-25373729:-] 0.5012 124 0 -16.68 -0.1923 MIMAT0003482 mmu-miR-499 22030 Traf2 uuuGUAGUGACGUUC-AGAAUu ::|| |||::|| ||||| cucUGUC-CUGUGAGUUCUUAc 2 19 1129 1149 [mm9:2:25373781-25373801:-] 0.5012 124 0 -12.06 -0.1131 MIMAT0003486 mmu-miR-491 22030 Traf2 ggaguacCUUCCC--AAGGGGUGa || || |||||||| gcaaaguGACUGGCCUUCCCCACc 2 16 347 370 [mm9:2:25374560-25374583:-] 0.5062 146 7 -18.63 -0.1110

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G006841 Traf2 Mus musculus 22030

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Traf2 mmu-miR-511 beg:129 end:142 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& |||| |||||| &5' ------CAGA----AAGGCA- 3' Traf2 mghv-miR-M1-9 beg:760 end:775 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& .||| |||||||. &5' ---------TAGG-AAATGTGG 3' Traf2 mmu-miR-223 beg:1054 end:1073 pic:3' ACCCCATAAACTGTTTGACTGT 5'& ||. |.||||||||| &5' ----GTGGC-GGCAAACTGAC- 3' Traf2 mmu-miR-879 beg:135 end:154 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||| .|| ||||||| &5' GGCA-GGAAG---AAGCCTC- 3' Traf2 mmu-miR-343 beg:267 end:285 pic:3' AGACCCGTGTACTTCCCTCT 5'& |||||| ||||||||| &5' TCTGGG-----GAAGGGAGA 3' Traf2 mmu-miR-2145 beg:868 end:884 pic:3' TTGGTCCGGGCTGGGACGA 5'& ||| . |||||||| &5' ----AGG-TGGACCCTGC- 3' Traf2 mmu-miR-1194 beg:607 end:626 pic:3' TCCTAGATCGTCAATGAGTAAG 5'& ||| || |||||||||| &5' ----TCT-GCC-TTACTCATTC 3' Traf2 mmu-miR-28 beg:238 end:257 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||||||. ||||||| &5' --CAATAGGAA---AGCTCCT- 3' Traf2 mmu-miR-1983 beg:792 end:819 pic:3' TCTTTTGTACGAGG-----TCCACTC 5'& | .|.|||||| . |||||. &5' -GTGAGCATGCTGTGATGGAGGTGG- 3' Traf2 mmu-miR-1983 beg:850 end:877 pic:3' TCTTTTGTACGAGG-----TCCACTC 5'& | .|.|||||| . |||||. &5' -GTGAGCATGCTGTGATGGAGGTGG- 3' Traf2 mmu-miR-1930 beg:789 end:817 pic:3' TGCGACGTCC--ATGA---TACCTCCA 5'& ||||. | |.|| |||||||| &5' --GCTGTGAGCATGCTGTGATGGAGGT 3' Traf2 mmu-miR-1930 beg:847 end:875 pic:3' TGCGACGTCC--ATGA---TACCTCCA 5'& ||||. | |.|| |||||||| &5' --GCTGTGAGCATGCTGTGATGGAGGT 3' Traf2 mmu-miR-1930 beg:906 end:933 pic:3' TGCGACG-TCC-ATGA---TACCTCCA 5'& ||||| || |.|| ||||||| &5' --GCTGCGAGCATGCTGTGATGGAGG- 3' Traf2 mmu-miR-3470a beg:336 end:356 pic:3' GGTCGGACCAGATGTTTCACT 5'& |||| || .|||||||| &5' -CAGCA-GGA--GCAAAGTGA 3' Traf2 mmu-miR-759 beg:1072 end:1082 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||||||| &5' --------------CACTCTG- 3' Traf2 mmu-miR-34a beg:931 end:949 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .| .|||||||||| &5' ------GGAGGAGACACTGCC- 3' Traf2 mmu-miR-34c beg:931 end:949 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& .| .| |||||||| &5' ------GGAGGAG-ACACTGCC- 3' Traf2 mmu-miR-1968 beg:898 end:914 pic:3' TCAGGTGGTA-GGAATTGTCGACGT 5'& ||| || ||||||| &5' -------CATGCC----CAGCTGC- 3' Traf2 mmu-miR-2861 beg:44 end:61 pic:3' GGCGGGCGGCGGTCCGGGG 5'& ||| |||||||||. &5' --GCCA---GCCAGGCCCT 3' Traf2 mghv-miR-M1-1 beg:1360 end:1374 pic:3' TTTCCTTCATGCCGGTAAAGAT 5'& | ||||||||. &5' -----------GCCCATTTCTG 3' Traf2 mmu-miR-449b beg:828 end:848 pic:3' CGGTCGATTGTTGTGACGGA 5'& |||||| .||| |||| &5' -CCAGCT-GCAAACATGCC- 3' Traf2 mmu-miR-449b beg:887 end:907 pic:3' CGGTCGATTGTTGTGACGGA 5'& |||||| .||| |||| &5' -CCAGCT-GCAAACATGCC- 3' Traf2 mmu-miR-3475 beg:146 end:157 pic:3' AAGTTTGGTACACGGAGGTCT 5'& |||||||| &5' ------------GCCTCCAG- 3' Traf2 mmu-miR-214 beg:248 end:262 pic:3' TGACGGACAGACACGGACGACA 5'& ||. |||||||| &5' ---GCT--------CCTGCTGT 3' Traf2 mmu-miR-450b-5p beg:823 end:842 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |.|| || .||||||| &5' ----CGGGCCCA-GCTGCAAA- 3' Traf2 mmu-miR-666-3p beg:326 end:343 pic:3' TCGTCCGCTAGTG--CGACGTCGG 5'& ||| |||||||| &5' ---------TCAAGAGCTGCAGC- 3' Traf2 mmu-miR-542-3p beg:1165 end:1175 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||||| &5' --------------CTGTCAC- 3' Traf2 mmu-miR-1898 beg:696 end:715 pic:3' CTAGGGGACACTTGGAACTGGA 5'& |.||. .|||||||||| &5' GGTCT------GACCTTGACCT 3' Traf2 mmu-miR-674star beg:20 end:39 pic:3' AACAAGACTCTAC-CCTCGACAC 5'& || || || |||||||| &5' -----CTCAG-TGAGGAGCTGT- 3' Traf2 mmu-miR-701 beg:387 end:399 pic:3' AGGTAGATAAAGTCGCCGATT 5'& .|||||||| &5' -----------TAGCGGCTA- 3' Traf2 mmu-miR-124star beg:779 end:804 pic:3' TAGTTCCAGG--CGACACTTGTGC 5'& || ||| |||||||.||.| &5' --CATGGTGTGAGCTGTGAGCATG 3' Traf2 mmu-miR-30estar beg:789 end:816 pic:3' CGACATTTGTA-GGCTG-ACTTTC 5'& |||||.|.||| |.| ||.|.| &5' GCTGTGAGCATGCTGTGATGGAGG 3' Traf2 mmu-miR-27a beg:783 end:810 pic:3' CGC-CTTGAA--TCG-GTGACACTT 5'& |.| ||.|| ||| ..|||||| &5' GTGTGAGCTGTGAGCATGCTGTGA- 3' Traf2 mmu-miR-27b beg:787 end:810 pic:3' CGTCTTGAA--TCG-GTGACACTT 5'& ||.|| ||| ..|||||| &5' ---GAGCTGTGAGCATGCTGTGA- 3' Traf2 mmu-miR-124star beg:844 end:862 pic:3' TAGTTCCAGG-CGACACTTGTGC 5'& || |||||||.||.| &5' --------CCAGCTGTGAGCATG 3' Traf2 mmu-miR-30estar beg:847 end:874 pic:3' CGACATTTGTA-GGCTG-ACTTTC 5'& |||||.|.||| |.| ||.|.| &5' GCTGTGAGCATGCTGTGATGGAGG 3' Traf2 mmu-miR-27a beg:842 end:868 pic:3' CGCCTTGAA--TCG-GTGACACTT 5'& || |.|| ||| ..|||||| &5' GCCCAGCTGTGAGCATGCTGTGA- 3' Traf2 mmu-miR-27b beg:842 end:868 pic:3' CGTCTTGAA--TCG-GTGACACTT 5'& || |.|| ||| ..|||||| &5' GCCCAGCTGTGAGCATGCTGTGA- 3' Traf2 mmu-miR-124star beg:903 end:921 pic:3' TAGTTCCAGG-CGACACTTGTGC 5'& || |||| ||.||.| &5' --------CCAGCTGCGAGCATG 3' Traf2 mmu-miR-27a beg:901 end:927 pic:3' CGCCTTGAA--TCG-GTGACACTT 5'& || |.|| ||| ..|||||| &5' GCCCAGCTGCGAGCATGCTGTGA- 3' Traf2 mmu-miR-27b beg:901 end:927 pic:3' CGTCTTGAA--TCG-GTGACACTT 5'& || |.|| ||| ..|||||| &5' GCCCAGCTGCGAGCATGCTGTGA- 3' Traf2 mmu-miR-30estar beg:1146 end:1157 pic:3' CGACATTTGTAGGCTGACTTTC 5'& || |||.||| &5' ------------CG-CTGGAAG 3' Traf2 mmu-miR-673-5p beg:794 end:810 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || || ||||||| &5' -------GAGCAT-GCTGTGA- 3' Traf2 mmu-miR-673-5p beg:839 end:858 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || .|| ||||||||| &5' ---CAT--GCCC-AGCTGTGAG 3' Traf2 mmu-miR-673-5p beg:852 end:868 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || || ||||||| &5' -------GAGCAT-GCTGTGA- 3' Traf2 mmu-miR-207 beg:1096 end:1109 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& ||. ||||||| &5' -----------GCT-GGAGAAG- 3' Traf2 mmu-miR-207 beg:391 end:410 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& || ||||||||| &5' ------GGCTACACAGGAGAAG- 3' Traf2 mmu-miR-1952 beg:198 end:216 pic:3' GTCTTCCTC--CCACCTCT 5'& ||||. ||||||| &5' ---AAGGGCCTGGTGGAG- 3' Traf2 mmu-miR-702 beg:67 end:79 pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||||||||| &5' ------------GGGTGGGCA 3' Traf2 mmu-miR-702 beg:762 end:781 pic:3' CTCGCCCCATTT-C-CCACCCGT 5'& || ||| | |||||||| &5' ------GG-AAATGTGGTGGGCA 3' Traf2 mmu-miR-486 beg:712 end:729 pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& ||| ||||||| &5' -----GGCCAAT--GTACAGG- 3' Traf2 mcmv-miR-m107-1-5p beg:647 end:666 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& .|| || | ||||||| &5' -----TTCAAGCCCAGTGACC- 3' Traf2 mcmv-miR-m21-1 beg:961 end:974 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||||||||.| &5' -----------TGTCCCCTGT 3' Traf2 mcmv-miR-m22-1 beg:502 end:524 pic:3' ACCGGAGCCATGCCTGCCC-CTT 5'& |||||| |||.|| ||| ||| &5' TGGCCT--GTATGG--GGGAGAA 3' Traf2 mcmv-miR-M23-2 beg:350 end:369 pic:3' GGCGAACTGGCTCC-GGGGGTA 5'& ||||.|. .||||| &5' -----TGACTGGCCTTCCCCA- 3' Traf2 mghv-miR-M1-8 beg:282 end:303 pic:3' CTGGTTTGGGGGT-CACTCACGA 5'& |.|||. .| |||.||||| &5' ----AGACCTGTAGGTGGGTGCT 3' Traf2 mmu-let-7g beg:598 end:619 pic:3' TTGACATGTT--TGATGATGGAGT 5'& .| ||| ||.|||.| &5' ------GCTATCACTTCTGCCTTA 3' Traf2 mmu-let-7gstar beg:496 end:517 pic:3' CGTTCCG--TCACCGGACATGTCA 5'& || .||||||||||..| &5' -----GCCAGGTGGCCTGTATGG- 3' Traf2 mmu-miR-103 beg:788 end:808 pic:3' AGTATCGGGACATGTTACGACGA 5'& |||. || .| ||||||. &5' ----AGCTGTGAGC-ATGCTGT- 3' Traf2 mmu-miR-103 beg:846 end:866 pic:3' AGTATCGGGACATGTTACGACGA 5'& |||. || .| ||||||. &5' ----AGCTGTGAGC-ATGCTGT- 3' Traf2 mmu-miR-103 beg:905 end:925 pic:3' AGTATCGGGACATGTTACGACGA 5'& |||. | .| ||||||. &5' ----AGCTGCGAGC-ATGCTGT- 3' Traf2 mmu-miR-106b beg:1252 end:1274 pic:3' TAGACGTGACAG--TCGTGAAAT 5'& ||| ||||.|||| &5' ----GCAGGACCTAAGCATTTTA 3' Traf2 mmu-miR-10a beg:407 end:428 pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& .|| || ||.||||||. &5' -GCATG--CGC--CTGCAGGGTG 3' Traf2 mmu-miR-10b beg:407 end:428 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& .|| || ||.||||||. &5' -GCATG--CGC--CTGCAGGGTG 3' Traf2 mmu-miR-1188 beg:993 end:1012 pic:3' AGGACCGGGTTGG--AGTGTGGT 5'& .| ||. ||||||. &5' ------TCTGACTTTTCACACT- 3' Traf2 mmu-miR-1190 beg:151 end:172 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& ||| || |.|||||||. &5' --CAGTTGGC--CTTCAGCTGG 3' Traf2 mmu-miR-1193 beg:500 end:512 pic:3' CTATCATTTTGCCCACTGGAT 5'& ||||.|||. &5' ------------GGTGGCCTG 3' Traf2 mmu-miR-1199 beg:287 end:307 pic:3' GGCGCGCTGGCCC-TGAGTCT 5'& | . .||| .|||||| &5' ----GTAGGTGGGTGCTCAGA 3' Traf2 mmu-miR-122 beg:651 end:672 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& |||.| ||| || | ||||||| &5' CAAGC-CCAGTGAC-CACTCCA 3' Traf2 mmu-miR-124 beg:597 end:619 pic:3' CCGTAAGTGGCGCACGGAAT 5'& ||| ||||. | ||||||| &5' GGCTATCACTTC-TGCCTTA 3' Traf2 mmu-miR-1274a beg:191 end:211 pic:3' ACCGCGGACTTGTC--CCTGGACT 5'& ||||.| ||.||||. &5' ------CTGAGCTCAAGGGCCTGG 3' Traf2 mmu-miR-1274a beg:463 end:481 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& |||.| | ||.|||| &5' ------CTGGAGAAGGGCCTG- 3' Traf2 mmu-miR-128 beg:778 end:799 pic:3' TTTCTCTG-GCCAAG--TGACACT 5'& .| .||| .|||||| &5' ------GCATGGTGTGAGCTGTGA 3' Traf2 mmu-miR-128 beg:789 end:810 pic:3' TTTCTCTGGC-CAAG--TGACACT 5'& ||| |.| | | .|||||| &5' ---GAG-CTGTGAGCATGCTGTGA 3' Traf2 mmu-miR-128 beg:847 end:868 pic:3' TTTCTCTGGC-CAAG--TGACACT 5'& .|.| | | .|||||| &5' ------GCTGTGAGCATGCTGTGA 3' Traf2 mmu-miR-130bstar beg:265 end:282 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& ||. |||.|||.| &5' -----TGTCT--GGGGAAGGG- 3' Traf2 mmu-miR-132 beg:962 end:983 pic:3' GCTGGTACCGACATCTGACAAT 5'& | || ||||.|||||||. &5' -GTCCC---CTGTGGACTGTTG 3' Traf2 mmu-miR-136 beg:797 end:815 pic:3' GGTAGTAGTTTTGT--TTACCTCA 5'& || .| .|||||| &5' -------CAT-GCTGTGATGGAG- 3' Traf2 mmu-miR-136 beg:855 end:873 pic:3' GGTAGTAGTTTTGT--TTACCTCA 5'& || .| .|||||| &5' -------CAT-GCTGTGATGGAG- 3' Traf2 mmu-miR-136 beg:914 end:932 pic:3' GGTAGTAGTTTTGT--TTACCTCA 5'& || .| .|||||| &5' -------CAT-GCTGTGATGGAG- 3' Traf2 mmu-miR-142-3p beg:928 end:948 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& ..|| ||||.|||||.| &5' -----GGAGGAGGAGACACTGC- 3' Traf2 mmu-miR-145star beg:128 end:146 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||| |||||| &5' -----ACAGAAAGG-CAGGAA- 3' Traf2 mmu-miR-146a beg:1132 end:1149 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& ||..|| ||||||.| &5' --CCTGTG------AGTTCTTA 3' Traf2 mmu-miR-146b beg:1130 end:1149 pic:3' TC-GGATACCTTAAGTCAAGAGT 5'& | |||.|| ||||||.| &5' -GTCCTGTG------AGTTCTTA 3' Traf2 mmu-miR-151-3p beg:91 end:115 pic:3' GGAGTTC-CTCGGAGTCAGATC 5'& || ..| |.||||||| |||| &5' -CTGGGGAGGGCCTCAGCCTAG 3' Traf2 mmu-miR-15astar beg:491 end:512 pic:3' ACTCCGT--CGTGTCATACCGGAC 5'& || || ||| .||||||| &5' ----GCCTTGC-CAG-GTGGCCTG 3' Traf2 mmu-miR-184 beg:1113 end:1137 pic:3' TGGGAATAGTCA---AGAGGCAGGT 5'& .|||.|. ||||.|||| &5' --TCTTGTTTCTTTCTCTCTGTCC- 3' Traf2 mmu-miR-185 beg:1114 end:1133 pic:3' AGTCCTTGACG--GAAAGAGAGGT 5'& .||. |||||||||. &5' -------TTGTTTCTTTCTCTCT- 3' Traf2 mmu-miR-1894-5p beg:503 end:523 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& | ||| || |.||||||| &5' -GTGGCCTGTA-TGGGGGAGA- 3' Traf2 mmu-miR-1896 beg:1215 end:1233 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& || |.| |||||| &5' ---CTTGCTCTG---CAGAGA- 3' Traf2 mmu-miR-18a beg:1097 end:1120 pic:3' GATAGACGTGA-TCTACGTGGAAT 5'& ||| | .|.||||.|||. &5' ----CTGGAGAAGGGTGCATCTTG 3' Traf2 mmu-miR-1906 beg:560 end:578 pic:3' TCGGGACGGAGTCCGACGACGT 5'& .||| ||| ||||||. &5' ---TCTGGCTC---CTGCTGT- 3' Traf2 mmu-miR-1928 beg:330 end:349 pic:3' CTCGAC--CGTTACATCGA 5'& |||||| |||. ||| &5' GAGCTGCAGCAGG--AGC- 3' Traf2 mmu-miR-1928 beg:417 end:432 pic:3' CTCGACCGTTACATCGA 5'& || || .|||||| &5' --GCAGG--GTGTAGC- 3' Traf2 mmu-miR-1928 beg:163 end:183 pic:3' CTCGACCGTTACA-TCGA 5'& ||||||||| ||.| &5' -AGCTGGCAAACTGAGTT 3' Traf2 mmu-miR-1935 beg:255 end:273 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& |.|.| ||||||.|| &5' ------CTGTCT-CCTCTGTCT 3' Traf2 mmu-miR-1935 beg:598 end:617 pic:3' TCTCTAGGCGGTC--GGAGACGGA 5'& ||.| |.||||||| &5' --------GCTATCACTTCTGCCT 3' Traf2 mmu-miR-193star beg:1164 end:1187 pic:3' AGTAGAACGGGCGTT--TCTGGGT 5'& | ||.| | .|||||| &5' ----CCTGTCACCTAGTGGACCCA 3' Traf2 mmu-miR-1941-5p beg:246 end:266 pic:3' TTCGGAGACATGGTCG-TAGAGGGA 5'& ||||. || || .|||||. &5' AAGCT------CCTGCTGTCTCCT- 3' Traf2 mmu-miR-1948 beg:96 end:116 pic:3' GACATGCTCAC-GAGACGGATTT 5'& ||| | ||| |||||.| &5' ------GAGGGCCTCAGCCTAGA 3' Traf2 mmu-miR-1948 beg:671 end:689 pic:3' GACATGCTCACG-AGACGGATTT 5'& ||| |||||||... &5' --------GTGAGTCTGCCTGGG 3' Traf2 mmu-miR-1948 beg:463 end:485 pic:3' GACATGCTCA-CGAGACGGATTT 5'& ||| || || ||||||.. &5' CTGGA-GAAGGGC-CTGCCTGG- 3' Traf2 mmu-miR-1953 beg:1113 end:1130 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.|| |||||.| &5' ------CTTGTTT-CTTTCTC- 3' Traf2 mmu-miR-1954 beg:1212 end:1230 pic:3' TTGTCCCA-GAGTGAGACGTCA 5'& || || |||||||| &5' ------GTGCTTGCTCTGCAG- 3' Traf2 mmu-miR-1956 beg:607 end:631 pic:3' AGGCGAC-TGAGTCGGGACCTGA 5'& ||.|| ||||| ..|||||| &5' TCTGCCTTACTCA-TTCTGGAC- 3' Traf2 mmu-miR-1957 beg:596 end:610 pic:3' CAGTATACGAGATGGTGAC 5'& || |||.|||| &5' ------TGG-CTATCACT- 3' Traf2 mmu-miR-1962 beg:476 end:499 pic:3' TACACAGGGTC--ACG-GTCGGAGA 5'& || || | ||| ||||||. &5' ---TG-CCTGGGCTGCACAGCCTT- 3' Traf2 mmu-miR-1968 beg:323 end:341 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& .||. || ||||||| &5' --------GTCTC-AAGAGCTGCA 3' Traf2 mmu-miR-1968 beg:819 end:840 pic:3' TCAGGTGGTA-GGAATTGTCGACGT 5'& | ||. || |||||||| &5' ---CTGCCGGGCC----CAGCTGCA 3' Traf2 mmu-miR-1968 beg:877 end:899 pic:3' TCAGGTGGTA--GGAATTGTCGACGT 5'& | ||. || |||||||| &5' ---CTGCCGGGGCC----CAGCTGCA 3' Traf2 mmu-miR-1983 beg:488 end:508 pic:3' TCTTTTGTACGA---GGTCCACTC 5'& ||| || |||||||. &5' -----ACA-GCCTTGCCAGGTGG- 3' Traf2 mmu-miR-199a-5p beg:80 end:99 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |.|| | ||..||||| &5' -------TGGTGTAAATGCTGGG 3' Traf2 mmu-miR-199a-5p beg:993 end:1014 pic:3' CTTGTCCATCAGACT------TGTGACCC 5'& ||||| ||||||| &5' ----------TCTGACTTTTCACACTGG- 3' Traf2 mmu-miR-199bstar beg:80 end:99 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |.|| ||||..||||| &5' -------TGGTGTAAATGCTGGG 3' Traf2 mmu-miR-199bstar beg:993 end:1014 pic:3' CTTGTCCATCAGATT------TGTGACCC 5'& |||.| ||||||| &5' ----------TCTGACTTTTCACACTGG- 3' Traf2 mmu-miR-19a beg:743 end:762 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |||| |.|||||||| &5' ------TTGCCT-GGTTTGCACA 3' Traf2 mmu-miR-19b beg:743 end:762 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& |||| ||| |||||||| &5' ------TTGCCTGG-TTTGCACA 3' Traf2 mmu-miR-201 beg:536 end:556 pic:3' TTCTTGTTACGGA-ATGACTCAT 5'& .|||.|| |.||||||. &5' ------GATGTCTGTGCTGAGTG 3' Traf2 mmu-miR-203 beg:1255 end:1275 pic:3' GATCACCAGGATTTGTAAAGTG 5'& || |||||.|||||.|| &5' -----GGACCTAAGCATTTTAC 3' Traf2 mmu-miR-203 beg:1308 end:1326 pic:3' GATCACCAGGATTTGTAAAGTG 5'& ||||||| ||||||.| &5' CTAGTGG------ACATTTTA- 3' Traf2 mmu-miR-204 beg:266 end:284 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& | ||. .||||||. &5' -------GTCTGGGGAAGGGAG 3' Traf2 mmu-miR-205 beg:794 end:816 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& || .| || |||.||| &5' --GAGCATGCTGTGATGGAGG- 3' Traf2 mmu-miR-205 beg:852 end:874 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& || .| || |||.||| &5' --GAGCATGCTGTGATGGAGG- 3' Traf2 mmu-miR-205 beg:681 end:701 pic:3' GTCTGAGGCCA--CCTTACTTCCT 5'& .| |.|| | ||||||| &5' ---GC-CTGGGTAGAGATGAAGG- 3' Traf2 mmu-miR-20a beg:1392 end:1417 pic:3' GATGGACGTGATATTCGTGAAAT 5'& || ||||| .|.||| ||.||| &5' CTTCCTGCTTTGTAAACATTTT- 3' Traf2 mmu-miR-20bstar beg:321 end:342 pic:3' GATCTTCACGAGTG--TGACGTCA 5'& || ||| |||| .|||||| &5' --AG-AGT-CTCAAGAGCTGCAG- 3' Traf2 mmu-miR-211 beg:266 end:283 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& | ||. .||||||. &5' -------GTCTGGGGAAGGGAG 3' Traf2 mmu-miR-212 beg:962 end:983 pic:3' ACCGGCACTGACCTCTGACAAT 5'& |.| ||| |||||||. &5' --GTCCC--CTGTGGACTGTTG 3' Traf2 mmu-miR-2135 beg:1226 end:1244 pic:3' CAAAGC-CGGGGTTCTGGAGA 5'& | | |.|.|||||| &5' -----GAGATCTAGGACCTC- 3' Traf2 mmu-miR-2137 beg:203 end:224 pic:3' GAGGGACC-CCGAGGGCGGCCG 5'& ||||| || |||||.|| &5' ---CCTGGTGGAGCCCGCTGG- 3' Traf2 mmu-miR-214 beg:555 end:578 pic:3' TGACGGACAGACAC-GGACGACA 5'& ||.. |||| |||||||| &5' --TGTTCATCTGGCTCCTGCTGT 3' Traf2 mmu-miR-2141 beg:620 end:637 pic:3' TTGAAAAGA-CTGTGGAGGA 5'& |||| ||||||||. &5' -----TTCTGGACACCTCT- 3' Traf2 mmu-miR-2146 beg:306 end:320 pic:3' GTGTACCTTGGGAAGAGGTG 5'& |..|| |||||| &5' ------GGGCC--TCTCCA- 3' Traf2 mmu-miR-214star beg:62 end:82 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& |||| |..||| |.||||| &5' -CACA-CGGGTG--GGCAGGC- 3' Traf2 mmu-miR-23a beg:762 end:792 pic:3' CCTTTAGGGA--CCGT-----TACACTA 5'& |||||| . |||| .||||| &5' GGAAATGTGGTGGGCAGCATGGTGTGA- 3' Traf2 mmu-miR-24 beg:1071 end:1090 pic:3' GACAAG-GACGACTTGACTCGGT 5'& || || ||| .|||.||| &5' ----TCACT-CTG-GCTGGGCC- 3' Traf2 mmu-miR-28 beg:553 end:573 pic:3' GAGTTATCTGACAC-------TCGAGGAA 5'& ||| .|||||| &5' -----------GTGTTCATCTGGCTCCT- 3' Traf2 mmu-miR-28 beg:1124 end:1148 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||| |. |||||||.||.| &5' CTCTCTGTCCTGTGAGTTCTT- 3' Traf2 mmu-miR-2861 beg:1146 end:1166 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |||. | ||.|||||. &5' -CGCTGGAAGCTAGGCCT- 3' Traf2 mmu-miR-296-5p beg:872 end:892 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& ||| ||||||| &5' ---GGACCCTGCCGGGGCCC- 3' Traf2 mmu-miR-298 beg:243 end:272 pic:3' CCCTTCTTGT---CGG--GAGGAGACGG 5'& |||| |.| ||. ||||||||.| &5' -GGAA-AGCTCCTGCTGTCTCCTCTGTC 3' Traf2 mmu-miR-302d beg:1263 end:1284 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& .||.|. |||||| || || &5' GCATTTT-ACATGG--GCTCT-- 3' Traf2 mmu-miR-30c-2star beg:481 end:504 pic:3' TCTC-ATTTGTCGGAAGAGGGTC 5'& |.| |. |||||||| |||| &5' -GGGCTGCACAGCCTTG--CCAG 3' Traf2 mmu-miR-323-5p beg:652 end:669 pic:3' CGCTTGCGCGGTGCCTGGTGGA 5'& || ||| ||||||. &5' ------GC-CCAGTGACCACT- 3' Traf2 mmu-miR-325star beg:1003 end:1023 pic:3' TGTGAATGACTCGTGGATGATCC 5'& ||| |||| | |..||||.| &5' -CAC--ACTG-G-ATTTACTGG- 3' Traf2 mmu-miR-327 beg:636 end:656 pic:3' TAGGAGTACGGGGAGTTCA 5'& ||||.|| ||.||||| &5' -TCCTTATATCCTTCAAG- 3' Traf2 mmu-miR-330 beg:97 end:117 pic:3' CGGATTCTGT-GTCCGGGTCTCT 5'& |.|.| || |||.|||| &5' ----AGGGCCTCA-GCCTAGAG- 3' Traf2 mmu-miR-337-3p beg:1177 end:1197 pic:3' TCCGTAGTATATCCTCGACTT 5'& || || ||||||. &5' -GGACCCAGAA--GAGCTGG- 3' Traf2 mmu-miR-338-3p beg:1083 end:1105 pic:3' GTTGTTTTAGTGACTACGACCT 5'& ..| ||| ||||||| &5' -GGCCCCGTAACT--TGCTGGA 3' Traf2 mmu-miR-339-3p beg:967 end:989 pic:3' GCCGAGACAGC-GGCTCCGCGAGT 5'& |||| | |.| |.||||| &5' -----CTGTGGACTGTTGTGCTCA 3' Traf2 mmu-miR-340-5p beg:1385 end:1410 pic:3' TTAGTCAGAGTA--ACGAAATATT 5'& |.|||.|| ||||||.||| &5' --TTAGTTTCTTCCTGCTTTGTAA 3' Traf2 mmu-miR-343 beg:503 end:523 pic:3' AGAC-CCGT--GTACTTCCCTCT 5'& | ||| .||| .|||||| &5' ---GTGGCCTGTATG-GGGGAGA 3' Traf2 mmu-miR-345-5p beg:1243 end:1268 pic:3' TTCGTG-ACCTGATCCCCAG-TCG 5'& ||||. |||.| ||| ||| &5' -AGCATGTGGGC-AGGACCTAAGC 3' Traf2 mmu-miR-3470a beg:474 end:495 pic:3' GGTCGGACCAGATGTTTCACT 5'& || |||||| ||.|| || &5' CCTGCCTGGGCTGCACAG--- 3' Traf2 mmu-miR-3470b beg:474 end:495 pic:3' GGTCGGACCAGATGTCTCACT 5'& || |||||| ||.|| || &5' CCTGCCTGGGCTGCACAG--- 3' Traf2 mmu-miR-3473 beg:1114 end:1133 pic:3' CCGACTC-GGTAGAGAGGT 5'& .|| |. ||||||. &5' --TTGTTTCTTTCTCTCT- 3' Traf2 mmu-miR-34b-5p beg:928 end:949 pic:3' TGTTAGTCGATTAA--TGTGACGGA 5'& .| .| |||||||| &5' ------GGAGGAGGAGACACTGCC- 3' Traf2 mmu-miR-370 beg:326 end:346 pic:3' TGGTCCAAGG---TGGGGTCGTCCG 5'& || .|. ||||||| &5' -------TCAAGAGCTGCAGCAGG- 3' Traf2 mmu-miR-375 beg:330 end:352 pic:3' AGTGCGCTCGGC-TTG--CTTGTTT 5'& ||||.| |.| ||.|||| &5' ------GAGCTGCAGCAGGAGCAAA 3' Traf2 mmu-miR-378star beg:721 end:743 pic:3' TGTGTCCTGGAC-CTCAGTCCTC 5'& .||||| ||| | |||||| &5' -TACAGG-CCTTTGTCTCAGGA- 3' Traf2 mmu-miR-412 beg:486 end:508 pic:3' GCCGA-TCACC-TGGTCCACTT 5'& || || .|||||||. &5' --GCACAGCCTTGCCAGGTGG- 3' Traf2 mmu-miR-431 beg:1244 end:1262 pic:3' ACGTACTGCCGGACGTTCTGT 5'& ||||| .|| |||.||| &5' -GCATG-TGG---GCAGGAC- 3' Traf2 mmu-miR-449a beg:928 end:949 pic:3' TGGTCGATTGTTATGTGACGGT 5'& .| .| .| |||||||| &5' ---GGAGGAGGAGACACTGCC- 3' Traf2 mmu-miR-449b beg:928 end:949 pic:3' CGGTCGATTG--TTGTGACGGA 5'& .| .| .|||||||| &5' ---GGAGGAGGAGACACTGCC- 3' Traf2 mmu-miR-449c beg:928 end:949 pic:3' GGTCGATCGTTA-C-GTGACGGA 5'& || || |. | ||||||| &5' --AGG-AGGAGGAGACACTGCC- 3' Traf2 mmu-miR-450b-5p beg:881 end:901 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |.|| | .||||||| &5' ----CGGGGCCCAGCTGCAAA- 3' Traf2 mmu-miR-452 beg:823 end:844 pic:3' CAGAGTCAAAGGA--GACGTTTGT 5'& |.| || ||||||||| &5' ----CGGG--CCCAGCTGCAAACA 3' Traf2 mmu-miR-452 beg:1389 end:1413 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||.|| | ||.||.||||| &5' GTTTCTTCCTGCTTTGTAAACA 3' Traf2 mmu-miR-455 beg:960 end:981 pic:3' CACATATACGGG-CACCTGACG 5'& ||.| ||| ||||||||. &5' ----ATGTCCCCTGTGGACTGT 3' Traf2 mmu-miR-464 beg:73 end:88 pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& .||| .||||||. &5' ------GCAG-----GCTTGGTG 3' Traf2 mmu-miR-466g beg:530 end:548 pic:3' ACACACACGTACACAGACATA 5'& ||| || |||||||. &5' --TGT-TGAGA-TGTCTGTG- 3' Traf2 mmu-miR-483 beg:1118 end:1140 pic:3' GAGGGAAGAGA-AGAGGGCAGAA 5'& |.|.|||||| | |||.|| &5' -TTCTTTCTCTCTGTCCTGT--- 3' Traf2 mmu-miR-491 beg:349 end:370 pic:3' GGAGTACCTTCCC-AAGGGGTGA 5'& .|| || |||||||| &5' ----GTGACTGGCCTTCCCCAC- 3' Traf2 mmu-miR-493 beg:344 end:365 pic:3' GGAC-CGTGTGTCATC--CTGGAAGT 5'& | ||| |||. |.||||| &5' ---GAGCAA--AGTGACTGGCCTTC- 3' Traf2 mmu-miR-501-3p beg:1094 end:1116 pic:3' GTTTAGGAACGGG-----CCCACGTAA 5'& |||||. |||||||| &5' ------CTTGCTGGAGAAGGGTGCAT- 3' Traf2 mmu-miR-509-5p beg:1268 end:1290 pic:3' TACTAACGGTGTA----AGACCTCAT 5'& ..|||| ||||||||| &5' -------TTACATGGGCTCTGGAGTA 3' Traf2 mmu-miR-511 beg:392 end:413 pic:3' ACTCACGTC---TCGTTTTCCGTA 5'& || || |.||||||| &5' -----GCTACACAGGAGAAGGCAT 3' Traf2 mmu-miR-540-3p beg:986 end:1004 pic:3' GGTCCTAGCTG--GAGACTGGA 5'& .|.| |||||||.| &5' -------TGGCTTCTCTGACTT 3' Traf2 mmu-miR-540-3p beg:582 end:604 pic:3' GGTC-CTAGCT-GGAGACTGGA 5'& .|| ||| || ||||||.|. &5' -TAGTGAT-GACCCTCTGGCT- 3' Traf2 mmu-miR-542-3p beg:1038 end:1056 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||| ||. ||||||. &5' ---CAGCA--CAG-CTGTCAT- 3' Traf2 mmu-miR-542-3p beg:21 end:43 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||| |||||||| &5' --TCAGTGAGGAG-CTGTCACA 3' Traf2 mmu-miR-542-5p beg:692 end:712 pic:3' AGCACTGTACTACTAGGGGCTC 5'& ||| ||| ||..|| &5' ---TGAAGGTCTGA-CCTTGA- 3' Traf2 mmu-miR-544 beg:407 end:427 pic:3' CTCGAACGATTTTTACGTCTTA 5'& .|| ||| |||||..| &5' -GGCATGCGCC---TGCAGGGT 3' Traf2 mmu-miR-615-3p beg:274 end:299 pic:3' TTCTCCCTCTGGG--TCCGAGCCT 5'& |||.| ||||||. |||. || &5' AAGGGAGAGACCTGTAGGTG-GG- 3' Traf2 mmu-miR-654-5p beg:1203 end:1228 pic:3' TGTGTACAAGACGT-CGA-ATGGT 5'& ||||||||| ||| ||| |.| &5' ACACATGTTGTGCTTGCTCTGC-- 3' Traf2 mmu-miR-666-5p beg:1199 end:1223 pic:3' CCGAGAGTGT---CGACACGGGCGA 5'& ||||.||| |.|||||..||| &5' --CTCTTACACATGTTGTGCTTGCT 3' Traf2 mmu-miR-669g beg:1193 end:1219 pic:3' TAGTACAGT-TGTGTATGTTACGT 5'& .|.|| || ||||||. .||| &5' GTTATCTCTTACACATGTTGTGC- 3' Traf2 mmu-miR-671-3p beg:811 end:829 pic:3' CCACCTCGGGACTCTTGGCCT 5'& |||||| ||||| ||||. &5' GGTGGA-CCCTG----CCGGG 3' Traf2 mmu-miR-671-3p beg:869 end:891 pic:3' CCACCTCGGGAC--TCTTGGCCT 5'& |||||| ||||| .|..|| &5' GGTGGA-CCCTGCCGGGGCC--- 3' Traf2 mmu-miR-673-5p beg:779 end:800 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || || |||||||||| &5' ---CATGGTGT-GAGCTGTGAG 3' Traf2 mmu-miR-673-5p beg:907 end:927 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || |.|| || ||||||| &5' CTGCGAG---CAT-GCTGTGA- 3' Traf2 mmu-miR-676 beg:193 end:215 pic:3' TCGAGTTGTTGGAGT-CCTGCC 5'& ||||||| ..||| . ||| &5' AGCTCAAGGGCCTGGTGGA--- 3' Traf2 mmu-miR-677 beg:998 end:1015 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& || ||| |||||.| &5' -------CTTTTCA-CACTGGA 3' Traf2 mmu-miR-683 beg:329 end:346 pic:3' CTCCTGTGTCGAATGTCGTCC 5'& | ||| |.||||||| &5' ------AGAGC-TGCAGCAGG 3' Traf2 mmu-miR-688 beg:1129 end:1142 pic:3' CTTATTCATCAGC-GGACGCT 5'& .| ||||.|| &5' -----------TGTCCTGTGA 3' Traf2 mmu-miR-693-3p beg:1175 end:1196 pic:3' AATGTC-GGTGTAGACTTTCGACG 5'& . | || || |.||||| &5' --GTGGACC-CAGA--AGAGCTG- 3' Traf2 mmu-miR-693-3p beg:320 end:340 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& | ||.| || |.|||||| &5' --AGAGTCTCA----AGAGCTGC 3' Traf2 mmu-miR-698 beg:270 end:286 pic:3' TCCCTTCCTTTGCTCTTAC 5'& .|||||||.| |||| &5' GGGGAAGGGA--GAGA--- 3' Traf2 mmu-miR-702 beg:280 end:300 pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||| ||| ||||||. &5' GAGACCTGTA---GGTGGGT- 3' Traf2 mmu-miR-702 beg:1248 end:1258 pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||||||| &5' --------------GTGGGCA 3' Traf2 mmu-miR-704 beg:1204 end:1215 pic:3' GATCCTCGTCTCGTGTACAGA 5'& |||||||. &5' ------------CACATGTT- 3' Traf2 mmu-miR-705 beg:356 end:377 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||. ||||||| || || &5' -GCCTTCCCCACC-CCATCC 3' Traf2 mmu-miR-708 beg:237 end:257 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||| |||. |||||||| &5' -CCAA-TAGGA---AAGCTCCT- 3' Traf2 mmu-miR-709 beg:1391 end:1412 pic:3' AGGAGGACGGAGACGGAGG 5'& ||.||||| ||.||. | &5' TCTTCCTG-CTTTGTAAAC 3' Traf2 mmu-miR-713 beg:568 end:590 pic:3' CGAC-ACACGGAA--GTCACGT 5'& ||| ||||.|| .|||| &5' -CTGCTGTGTCTAGGTAGTG-- 3' Traf2 mmu-miR-717 beg:262 end:276 pic:3' TCTCTTCCATAGAGACAGACTC 5'& |||||||||.| &5' -----------CTCTGTCTGGG 3' Traf2 mmu-miR-741 beg:1186 end:1207 pic:3' AGATGTATCTT-ACC-GTAGAGAGT 5'& |||. ||| .||||||.| &5' -------AGAGCTGGTTATCTCTTA 3' Traf2 mmu-miR-742star beg:1132 end:1144 pic:3' ACTAATCGTTGGTACACTCAT 5'& || ||||||| &5' ----------CC-TGTGAGT- 3' Traf2 mmu-miR-744 beg:1208 end:1229 pic:3' ACGACAATCGGGATCGGGGCGT 5'& ||.||| ||. ||.|.||| &5' TGTTGT--GCTT--GCTCTGCA 3' Traf2 mmu-miR-744star beg:762 end:784 pic:3' TCCA--ACTCCAATCACCGTTGTC 5'& ||| || ||| ||||.|| &5' AGGAAATGTGGTG---GGCAGCA- 3' Traf2 mmu-miR-760 beg:101 end:119 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& || ||| ||.|||||| &5' ---CCTCAG-CCTAGAGCC- 3' Traf2 mmu-miR-761 beg:241 end:262 pic:3' ACACAGTCAAAGTG-GGACGACG 5'& .|| .| |||||||. &5' -----TAGGAAAGCTCCTGCTGT 3' Traf2 mmu-miR-761 beg:555 end:578 pic:3' ACACAGTCAAAGTG-GGACGACG 5'& ||||. | .| |||||||. &5' -GTGTTCATCTGGCTCCTGCTGT 3' Traf2 mmu-miR-763 beg:828 end:854 pic:3' CGG--TGACCAAGAA--GGGTCGACC 5'& ||| .||| |||||||| &5' GCCCAGCTGCAAACATGCCCAGCTG- 3' Traf2 mmu-miR-763 beg:885 end:913 pic:3' CGG--TGACCAAGAA--GGGTCGACC 5'& ||| .||| |||||||| &5' GCCCAGCTGCAAACATGCCCAGCTG- 3' Traf2 mmu-miR-764-5p beg:782 end:803 pic:3' TCCTC-CTGTACACTCGTGG 5'& || | || ||||||||. &5' -GGTGTGAGCTGTGAGCAT- 3' Traf2 mmu-miR-802 beg:1103 end:1125 pic:3' TTCCTACTTAGAAACAATGACT 5'& ||||.|| ||| ||||| || &5' AAGGGTGCATC-TTGTTTCT-- 3' Traf2 mmu-miR-876-5p beg:1212 end:1237 pic:3' ATCACTAAGTGT--C-TCTTTAGGT 5'& ||| | | | |||.|||.| &5' --GTGC-TTGCTCTGCAGAGATCTA 3' Traf2 mmu-miR-877 beg:251 end:270 pic:3' GGGACGCGGTAGAGGAGATG 5'& ||||| .||||||||. &5' -CCTGCT--GTCTCCTCTG- 3' Traf2 mmu-miR-878-5p beg:995 end:1016 pic:3' ACAGAACTGT-AGGT-TGATCTAT 5'& || |||| |.|| |||.||| &5' --TC-TGACTTTTCACACTGGAT- 3' Traf2 mmu-miR-881star beg:1114 end:1134 pic:3' TCTACACTGACAAT---AGAGAGAC 5'& .|||| |||||||| &5' --------TTGTTTCTTTCTCTCTG 3' Traf2 mmu-miR-92astar beg:349 end:371 pic:3' CATTACGGTGGTT---AGGGGTGGA 5'& |. || . |||||||| &5' -----GTGACTGGCCTTCCCCACC- 3' Traf2 mmu-miR-98 beg:600 end:619 pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||. |||| ||.|||.| &5' -----TATCACTT-CTGCCTTA 3' Traf2 mmu-miR-9star beg:1008 end:1028 pic:3' TGAAAGCC--AATAGATCGAAATA 5'& .|| ||| ||.|.|||| &5' -----TGGATTTA-CTGGTTTTA- 3' Traf2 mmu-let-7gstar beg:711 end:728 pic:3' CGTTCCGTCACCGG--ACATGTCA 5'& ||||| ||||||| &5' ---------TGGCCAATGTACAG- 3' Traf2 mmu-miR-742star beg:666 end:679 pic:3' ACTAATCGTTGGT-ACACTCAT 5'& ||| ||||||| &5' ----------CCATTGTGAGT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Traf2 RAID00035483 mmu-miR-702-3p miRNA MIMAT0003492 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00073020 mmu-miR-1968-3p miRNA MIMAT0017350 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00086699 mmu-miR-7001-5p miRNA MIMAT0027904 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00103177 mmu-miR-1191b-3p miRNA MIMAT0029867 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00149785 mmu-miR-7028-3p miRNA MIMAT0027961 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00240160 mmu-miR-346-3p miRNA MIMAT0017039 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00286098 mmu-miR-491-5p miRNA MIMAT0003486 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00368017 mmu-miR-1291 miRNA MIMAT0031397 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00369593 mmu-miR-742-5p miRNA MIMAT0004838 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00422413 mmu-miR-7669-3p miRNA MIMAT0029845 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00749402 mmu-miR-320-5p miRNA MIMAT0017057 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID00973544 mmu-miR-15a-5p miRNA MIMAT0000526 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01145213 mmu-miR-199a-5p miRNA MIMAT0000229 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01409920 mmu-miR-7049-3p miRNA MIMAT0028003 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01436343 mmu-miR-19a-3p miRNA MIMAT0000651 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01551394 mmu-miR-497a-5p miRNA MIMAT0003453 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01608090 mmu-miR-214-3p miRNA MIMAT0000661 Traf2 mRNA 22030 Prediction 0.2202 Traf2 RAID01890953 mmu-miR-499-5p miRNA MIMAT0003482 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01948527 mmu-miR-221-5p miRNA MIMAT0017060 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID01986954 mmu-miR-207 miRNA MIMAT0000240 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02200523 mmu-miR-7025-3p miRNA MIMAT0027955 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02233650 mmu-miR-539-5p miRNA MIMAT0003169 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02397430 mmu-miR-6989-3p miRNA MIMAT0027881 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02514888 mmu-miR-542-3p miRNA MIMAT0003172 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02545931 mmu-miR-7009-3p miRNA MIMAT0027923 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02613929 mmu-miR-1224-3p miRNA MIMAT0017231 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02634794 mmu-miR-370-3p miRNA MIMAT0001095 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID02809560 mmu-miR-6384 miRNA MIMAT0025130 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03004771 mmu-miR-19b-3p miRNA MIMAT0000513 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03047143 mmu-miR-7688-5p miRNA MIMAT0029906 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03093235 mmu-miR-322-5p miRNA MIMAT0000548 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03129443 mmu-miR-7016-3p miRNA MIMAT0027937 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03160752 mmu-miR-6356 miRNA MIMAT0025099 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03289486 mmu-miR-7045-3p miRNA MIMAT0027995 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03670576 mmu-miR-763 miRNA MIMAT0003896 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03703560 mmu-miR-761 miRNA MIMAT0003893 Traf2 mRNA 22030 Prediction 0.2202 Traf2 RAID03794309 mmu-miR-1231-5p miRNA MIMAT0022357 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03828598 mmu-miR-6393 miRNA MIMAT0025143 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03976398 mmu-miR-7679-5p miRNA MIMAT0029872 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID03988001 mmu-miR-6905-5p miRNA MIMAT0027710 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID04018970 mmu-miR-31-5p miRNA MIMAT0000538 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID04035514 mmu-miR-15b-5p miRNA MIMAT0000124 Traf2 mRNA 22030 Prediction 0.1828 Traf2 RAID05037628 Ttc39aos1 lncRNA 102635290 Traf2 protein 22030 Western Blot//RT-PCR 0.8808