SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4223277 | snp | A/G | 0.433884 | 0.169371 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701068 | CCCTGCCTGACACAG[A/G]AGAAAAGGGTGGCCT | 22034 |
rs4223278 | snp | A/G | 0.15879 | 0.232768 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701070 | CTGCCTGACACAGGA[A/G]AAAAGGGTGGCCTGT | 22034 |
rs4223279 | snp | A/G | 0.21875 | 0.248039 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701074 | CTGACACAGGAGAAA[A/G]GGGTGGCCTGTTGGT | 22034 |
rs4223280 | snp | C/T | 0.340265 | 0.233136 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701092 | GTGGCCTGTTGGTCA[C/T]CTGCCCTTCAGAATG | 22034 |
rs4223281 | snp | A/C | 0.375 | 0.216506 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701098 | TGTTGGTCACCTGCC[A/C]TTCAGAATGTAGCCC | 22034 |
rs4223282 | snp | A/C | 0.375 | 0.216506 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701102 | GGTCACCTGCCCTTC[A/C]GAATGTAGCCCCATC | 22034 |
rs4223283 | snp | C/T | 0.297521 | 0.245442 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701125 | GCCCCATCTGACTCC[C/T]AAAACCCCAGTTTCC | 22034 |
rs4223284 | snp | C/T | 0.21875 | 0.248039 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701173 | GAGAGGGCAGAGACC[C/T]CATTCTGGTCACTGC | 22034 |
rs4223285 | snp | C/T | 0.33241 | 0.236027 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701189 | CATTCTGGTCACTGC[C/T]GAACCCCTGTTTTTA | 22034 |
rs4223286 | snp | C/T | 0.30839 | 0.243086 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701193 | CTGGTCACTGCTGAA[C/T]CCCTGTTTTTAGCAT | 22034 |
rs4223287 | snp | A/G | 0.340265 | 0.233136 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701248 | TCACAAGCTTTAATG[A/G]GAGCCAGGGCAGAAG | 22034 |
rs4223288 | snp | A/G | 0.453686 | 0.144955 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101701259 | AATGGGAGCCAGGGC[A/G]GAAGCTGACTGGCTG | 22034 |
rs6260080 | snp | C/T | 0.429688 | 0.173817 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697506 | GGGGTGTAGCGTCCA[C/T]GTACTTGTGTTCAAA | 22034 |
rs6261151 | snp | A/G | 0.375 | 0.216506 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697738 | AAGGGCCTGTGGCTC[A/G]TCTGTCTGTCAGGGT | 22034 |
rs6261199 | snp | A/G | 0.415225 | 0.187619 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697762 | TCAGGGTACCCCTTC[A/G]CTGTGCTTCCATGGG | 22034 |
rs6261219 | snp | A/T | 0.49827 | 0.0293608 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697780 | GTGCTTCCATGGGCT[A/T]TTNTGTCCGTGTACT | 22034 |
rs6261594 | snp | A/T | 0.5 | 0 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697783 | CTTCCATGGGCTNTT[A/T]TGTCCGTGTACTTTA | 22034 |
rs6358602 | snp | C/T | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101682901 | acaagtggctgttag[C/T]cacccaacatggatg | 22034 |
rs6358622 | snp | A/G | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101682920 | ccaacatggatgaag[A/G]tatnaaactcaggtc | 22034 |
rs6358636 | snp | A/G | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101682924 | catggatgaagntat[A/G]aaactcaggtctcct | 22034 |
rs6371714 | snp | A/C | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101683029 | GGATCGAAAGACTTG[A/C]AGCATATAGAAAGGT | 22034 |
rs6371797 | snp | C/T | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101683080 | AGCCATGAGCACCCA[C/T]CTTTATTTCCAGTTC | 22034 |
rs6373254 | snp | G/T | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101683348 | TATTTAATACATTTA[G/T]GTATTGCTGTGTGGG | 22034 |
rs6373288 | snp | A/G | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101683367 | TTGCTGTGTGGGAGG[A/G]GGGTAGATGTCATAT | 22034 |
rs6373688 | snp | C/T | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101683386 | TAGATGTCATATGTA[C/T]GGAGGTCCNAGGACA | 22034 |
rs6373700 | snp | A/G | 0.5 | 0 | intron-variant | Traf6 | Mm_Celera | 2:101683395 | TATGTANGGAGGTCC[A/G]AGGACAACTtgnggg | 22034 |
rs6373724 | snp | A/T | 0.5 | 0 | intron-variant | Traf6 | GRCm38.p3 | 2:101683407 | TCCNAGGACAACTtg[A/T]gggttccagggattg | 22034 |
rs13467946 | snp | C/T | | | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700672 | GAGTGAAGAAGGGCA[C/T]GGTCAAGCGTCGTTT | 22034 |
rs27392546 | snp | C/T | 0.401235 | 0.199068 | downstream-variant-500B | Traf6 | Mm_Celera | 2:101701732 | TGGGTAAAGGTATAA[C/T]TTGAGACACATTTTG | 22034 |
rs27392547 | snp | G/T | 0.396694 | 0.202437 | downstream-variant-500B | Traf6 | Mm_Celera | 2:101701674 | ATTTATTTGCACGTT[G/T]CTGGTTATGTAGAAT | 22034 |
rs27392548 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700786 | AATGGATGGATGCTT[C/T]CCAATTCCCAGAATC | 22034 |
rs27392549 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700684 | GCACGGTCAAGCGTC[A/G]TTTGATTGTCTGTTG | 22034 |
rs27392550 | snp | C/T | 0.231111 | 0.249285 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700602 | GACTCAAATTCTCGC[C/T]ATTGTTACAGTTTTT | 22034 |
rs27392551 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700511 | TTTAACTTTAACTAT[C/T]GAGGTGATTCTTACT | 22034 |
rs27392552 | snp | C/T | 0.391111 | 0.206368 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700292 | AAAGGTGTCCTCTCA[C/T]CCTCGGAAGATCAAC | 22034 |
rs27392553 | snp | A/G | 0.35503 | 0.226867 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700242 | ATTCTGCTTTCTTCT[A/G]GAGAATGAAGAGGAG | 22034 |
rs27392554 | snp | A/C | 0.473373 | 0.11227 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700112 | TTAGAAAAATGCCTA[A/C]CTTACTATTGAAGAT | 22034 |
rs27392555 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101700007 | ATTCTCTTTGTACCA[A/G]TGGGCCTATAAGAAT | 22034 |
rs27392556 | snp | C/T | 0.35503 | 0.226867 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699985 | TTTACTTCACCACTT[C/T]CTGAACATTCTCTTT | 22034 |
rs27392557 | snp | A/C | 0.142012 | 0.225474 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699973 | AAAGCCGCTTTCTTT[A/C]CTTCACCACTTTCTG | 22034 |
rs27392558 | snp | A/G | 0.260355 | 0.249785 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699964 | TTAGCCTAGAAAGCC[A/G]CTTTCTTTACTTCAC | 22034 |
rs27392559 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699675 | GGTGTTTCTAGTATC[C/T]GCATTGAGAAGCCCA | 22034 |
rs27392560 | snp | A/G | 0.124444 | 0.216185 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699541 | TTAGGAAGAGCAGTC[A/G]TTTCCTGCCGTGGTT | 22034 |
rs27392561 | snp | A/T | 0.391111 | 0.206368 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699280 | TGTTTCCCAGTGGAG[A/T]AATAAATGTGGGCTT | 22034 |
rs27392562 | snp | C/G | 0.391111 | 0.206368 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699258 | CTGCATGGTCTTATA[C/G]TGTAGTTGTTTCCCA | 22034 |
rs27392563 | snp | A/G | 0.336735 | 0.234472 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699225 | GAGCTGCTTGTAGCA[A/G]CTTCTGCCTAAGGAG | 22034 |
rs27392564 | snp | C/T | 0.408163 | 0.193609 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699214 | CCAGCAGCCCTGAGC[C/T]GCTTGTAGCAACTTC | 22034 |
rs27392565 | snp | A/C | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101699052 | TCAGCTGTAGCCAGC[A/C]AGGGCCACTTTGACC | 22034 |
rs27392566 | snp | A/T | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698983 | ACCCGAGCAGTGCTC[A/T]GACCTGCCCTGTTCC | 22034 |
rs27392567 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698924 | AAGATCAGCTATGTG[C/T]TCTGGTGGTAAGAAA | 22034 |
rs27409968 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698817 | AATGTCCTGTACATA[C/T]ACAGTACTTTGGAGT | 22034 |
rs27409969 | snp | A/G | 0.124444 | 0.216185 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698671 | AGGTACCTGAGAGAT[A/G]CCTAAACCAAGGTTG | 22034 |
rs27409970 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698353 | ATGGCATCTCGTGGA[C/T]GATGACAGCAACTCT | 22034 |
rs27409971 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698310 | AAATCACCAGCCCAA[A/G]CGAGTGATTTAGCTC | 22034 |
rs27409972 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698271 | CCACAGCCGGTTGCA[C/T]ATCTTCTGTTGCTTG | 22034 |
rs27409973 | snp | A/G | 0.231111 | 0.249285 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101698182 | CCAGTCTGTAAGACC[A/G]CGGTCATGTGCTTGC | 22034 |
rs27409974 | snp | A/G | 0.231111 | 0.249285 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697672 | CAAATACCTGAGGCA[A/G]TTCCCATGGGAACCT | 22034 |
rs27409975 | snp | C/T | 0.391111 | 0.206368 | utr-variant-3-prime | Traf6 | Mm_Celera | 2:101697512 | TAGCGTCCATGTACT[C/T]GTGTTCAAAAACTAG | 22034 |
rs27409976 | snp | A/C | 0.444444 | 0.157135 | synonymous-codon | Traf6 | Mm_Celera | 2:101697377 | CACCTGGAAGCCTTA[A/C]GACAGGGAACCTTCA | 22034 |
rs27409977 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Traf6 | Mm_Celera | 2:101697229 | TACAATACGCCTTAC[A/G]ATTCTCGACCAGTCT | 22034 |
rs27409978 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Traf6 | Mm_Celera | 2:101696956 | GGAGGACAAGGTTGC[C/T]GAAATGGAAGCACAG | 22034 |
rs27409979 | snp | A/G | 0.391111 | 0.206368 | missense | Traf6 | Mm_Celera | 2:101696774 | CGTCCGTGCGATGCC[A/G]CCTCTCCATCCCGGG | 22034 |
rs27409980 | snp | C/T | 0.444444 | 0.157135 | synonymous-codon | Traf6 | Mm_Celera | 2:101696752 | TCATAATGTTAACCT[C/T]GCTTTGCGTCCGTGC | 22034 |
rs27409981 | snp | A/G | 0.426035 | 0.177515 | intron-variant | Traf6 | Mm_Celera | 2:101696631 | CTCGTCCTCGGTGAC[A/G]TCCCTAGCTTACGGC | 22034 |
rs27409982 | snp | C/G | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101696318 | GTTTGCCTTGTTTGT[C/G]TAATGCAAAGATTCT | 22034 |
rs27409983 | snp | C/T | 0.426035 | 0.177515 | intron-variant | Traf6 | Mm_Celera | 2:101696276 | TGAAGAAAATGATAT[C/T]GGCTAAGGGAAGCAT | 22034 |
rs27409984 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101695627 | GGGAACACAGGTGGA[C/T]GCTGACAAAGAAAGA | 22034 |
rs27409985 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101695478 | TGAGGGGAGAGAGAT[A/G]TAGGAGCCCAGACAT | 22034 |
rs27409986 | snp | C/T | 0.32 | 0.24 | intron-variant | Traf6 | Mm_Celera | 2:101694832 | ATGTTCAGGGCAGCC[C/T]TGGACCATGCTTCAG | 22034 |
rs27409987 | snp | A/C | 0.401235 | 0.199068 | intron-variant | Traf6 | Mm_Celera | 2:101694247 | TCAGCCTTCCTTTTG[A/C]TTTTCAGATGCCTAA | 22034 |
rs27409988 | snp | C/T | 0.359862 | 0.224567 | intron-variant | Traf6 | Mm_Celera | 2:101693914 | GAAGTAATGGATCTA[C/T]TCAGTGGTTTTAATG | 22034 |
rs27409989 | snp | C/T | 0.401235 | 0.199068 | intron-variant | Traf6 | Mm_Celera | 2:101693764 | AAACCTTCACTTGAG[C/T]TGAAACTGAGGCTGG | 22034 |
rs27409990 | snp | A/G | 0.359862 | 0.224567 | intron-variant | Traf6 | Mm_Celera | 2:101693439 | GGATAGAAAATGACA[A/G]AACAATCTGTCCCCA | 22034 |
rs27409991 | snp | A/G | 0.401235 | 0.199068 | intron-variant | Traf6 | Mm_Celera | 2:101693356 | ATTGATGATCACAGA[A/G]CTGGGAAAGTCGTTG | 22034 |
rs27409992 | snp | A/G | 0.429688 | 0.173817 | intron-variant | Traf6 | Mm_Celera | 2:101693211 | AATGTCCTAGCAGAT[A/G]CTCTAAAGAACATCC | 22034 |
rs27409993 | snp | A/G | 0.375 | 0.216506 | intron-variant | Traf6 | Mm_Celera | 2:101693187 | AATCAAAGACCCATG[A/G]TGCACATGAATGTCC | 22034 |
rs27409994 | snp | A/G | 0.426035 | 0.177515 | intron-variant | Traf6 | Mm_Celera | 2:101692363 | TGACTGCTTCCCTGT[A/G]TCTGTTAGTAGTGTT | 22034 |
rs27409995 | snp | C/G | 0.336735 | 0.234472 | intron-variant | Traf6 | Mm_Celera | 2:101692192 | CAAAAAAGGAGAATT[C/G]CATCCAGTTGCTATC | 22034 |
rs27409996 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101691992 | CTACACTGAAATGAG[A/G]GCCTCCTTGTCAGAG | 22034 |
rs27409997 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101691828 | AGGGGAGTAGAGAAT[C/T]GACCTAGTGTGCCCA | 22034 |
rs27409998 | snp | A/C | 0.426035 | 0.177515 | intron-variant | Traf6 | Mm_Celera | 2:101691275 | GACCTCTGAAGACTG[A/C]GTCTCACTAGCAAAA | 22034 |
rs27409999 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101691213 | TACTGCCGTGAGGTA[A/G]CAAGGACCGAGCTAA | 22034 |
rs27410000 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Traf6 | Mm_Celera | 2:101691045 | ACCCTTCTGAGAACT[C/T]GGGCACCAAAGCTTG | 22034 |
rs27410001 | snp | C/T | 0.35503 | 0.226867 | intron-variant | Traf6 | Mm_Celera | 2:101691033 | AAAATGGGGCTCACC[C/T]TTCTGAGAACTCGGG | 22034 |
rs27410002 | snp | C/T | 0.345679 | 0.230967 | intron-variant | Traf6 | Mm_Celera | 2:101690846 | GAGCATTTTATATTT[C/T]GTATGCTGATAAAAT | 22034 |
rs27410003 | snp | C/T | 0.152778 | 0.230321 | intron-variant | Traf6 | Mm_Celera | 2:101690709 | AGCGGTTTTCATTCT[C/T]CTGGGATGGAAGGAG | 22034 |
rs27410004 | snp | G/T | 0.165289 | 0.235211 | intron-variant | Traf6 | Mm_Celera | 2:101690697 | TCGTGCTGGTGGAGC[G/T]GTTTTCATTCTCCTG | 22034 |
rs27410005 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101690649 | GTGCTCCATTCACTC[C/T]TCAGTATAGAACAGT | 22034 |
rs27410006 | snp | A/G | 0.35503 | 0.226867 | synonymous-codon | Traf6 | Mm_Celera | 2:101690166 | TTGTCCCAGGAGGCA[A/G]GTTTCTTGTGTAAAC | 22034 |
rs27410007 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101689574 | ACACTTCACATTCTT[C/T]TTGATAAACTTGACA | 22034 |
rs27410008 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101688678 | CTAGCTGTTGTCGCA[A/G]TGTCGTCTCTAGAGC | 22034 |
rs27410009 | snp | C/T | 0.408163 | 0.193609 | synonymous-codon | Traf6 | Mm_Celera | 2:101688533 | GTTTCCCGACAATTT[C/T]GCAAAGCGAGAGATT | 22034 |
rs27410010 | snp | A/T | 0.396694 | 0.202437 | intron-variant | Traf6 | Mm_Celera | 2:101688448 | GCTACTAACTCTAAG[A/T]TCCTACTTCTTTTAG | 22034 |
rs27410011 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Traf6 | Mm_Celera | 2:101686965 | ATCAAAACAGCTCTC[C/T]GTCTAATTTCATTAT | 22034 |
rs27410012 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Traf6 | Mm_Celera | 2:101686294 | TGGGCTGCTCGGTGG[C/T]CTATACATTTTCATC | 22034 |
rs27410013 | snp | C/T | 0.489796 | 0.070696 | intron-variant | Traf6 | GRCm38.p3 | 2:101686112 | GTCTCACCTCCTAGG[C/T]TCTGTTACCTCCACA | 22034 |
rs27410014 | snp | G/T | 0.391111 | 0.206368 | intron-variant | Traf6 | Mm_Celera | 2:101685530 | TCACCCAGCTATACA[G/T]TAGTGTGCTGCCTGA | 22034 |
rs29500163 | snp | G/T | 0.48 | 0.0979796 | intron-variant | Traf6 | Mm_Celera | 2:101687626 | GGGTTTGGGGGCGAC[G/T]TGGGACCGTCCACAG | 22034 |
rs29509372 | snp | A/G | 0.32 | 0.24 | intron-variant | Traf6 | Mm_Celera | 2:101684929 | GGACAGAAACCTGAG[A/G]CAGTTGGGGTCCCAT | 22034 |
rs29536596 | snp | A/T | 0.375 | 0.216506 | intron-variant | Traf6 | Mm_Celera | 2:101685317 | CAAGGAACTGACTGT[A/T]TTAAAGAGTCTCAGC | 22034 |