SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs13474277 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Cstf1 | Mm_Celera | 2:172377699 | TCCCACGCTTCGCCT[A/G]TATGACATCAACACC | 67337 |
rs27615126 | snp | A/T | 0.21875 | 0.248039 | downstream-variant-500B | Cstf1 | Mm_Celera | 2:172382907 | TCTCAGGGAGACCTG[A/T]GAAATGTAAGCTAAA | 67337 |
rs27615127 | snp | G/T | 0.277778 | 0.248452 | downstream-variant-500B | Cstf1 | Mm_Celera | 2:172382576 | GGCTAGAAATCCTAG[G/T]TGCGTTCAGATGGGC | 67337 |
rs27615128 | snp | A/G | 0.18 | 0.24 | downstream-variant-500B | Cstf1 | Mm_Celera | 2:172382537 | CCGTGGCTGTGGGTG[A/G]CGTGGCTCACAGCTT | 67337 |
rs27615129 | snp | A/G | 0.152778 | 0.230321 | downstream-variant-500B | Cstf1 | Mm_Celera | 2:172382469 | ACGTAAAGGTAGTTT[A/G]TGTCTTTGGAGACTG | 67337 |
rs27615130 | snp | A/G | 0.336735 | 0.234472 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381990 | GTGCTGTCTAGGCAA[A/G]CTTTGTTCCTCTGGC | 67337 |
rs27615131 | snp | A/C | 0.426035 | 0.177515 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381945 | GGCCACCTGGGGGTG[A/C]TACCCATAGGTTAGG | 67337 |
rs27615132 | snp | C/T | 0.152778 | 0.230321 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381873 | AGAGCCGTTTCTGTC[C/T]GCAGGAAGTAGTAAC | 67337 |
rs27615133 | snp | C/T | 0.152778 | 0.230321 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381744 | ACAGTGTAAGGCCAC[C/T]GACTAAGCAATGACA | 67337 |
rs27615134 | snp | G/T | 0.297521 | 0.245442 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381683 | AGTCTGCTTTCTGTC[G/T]CTCCTGAAGAAGAGG | 67337 |
rs27615135 | snp | A/G | 0.18 | 0.24 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381645 | TGGGTTAAGTCACAT[A/G]CAGATGACCCTCTTA | 67337 |
rs27615136 | snp | C/G | 0.277778 | 0.248452 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172380996 | CTACATCTCTGAGGA[C/G]CCGGGTTCCATGTAG | 67337 |
rs27615137 | snp | A/G | 0.297521 | 0.245442 | utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172380888 | TTCCTGGAGAAGGAC[A/G]GCGTGTGGCCTCGGG | 67337 |
rs27615138 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Cstf1 | Mm_Celera | 2:172380237 | CACCTGCGAGTGACC[A/G]GAGTGAACAAACAGG | 67337 |
rs27615139 | snp | C/T | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172379673 | GTAGCATCTCCTTAG[C/T]GCTGTGTGCTGAGAC | 67337 |
rs27615140 | snp | A/G | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172379573 | TACTCACAGTTCACT[A/G]CAGAAGCCAGCGTCT | 67337 |
rs27615141 | snp | C/G | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379530 | TGGCGGTGTCGGCAT[C/G]ACTGAGAGTCACTGG | 67337 |
rs27615142 | snp | C/G | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379503 | CTGGTAAGTCTGTCC[C/G]TGCACACAGAATGGC | 67337 |
rs27615143 | snp | C/T | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379425 | GTCAGCCCATTTTAC[C/T]GCTAAGTCATTTGGT | 67337 |
rs27615144 | snp | A/G | 0.32 | 0.24 | intron-variant | Cstf1 | Mm_Celera | 2:172379332 | AACTCTGAAAAGAGA[A/G]CTGGTGGTGTCTTTC | 67337 |
rs27615145 | snp | C/T | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379298 | CAGTTGGTTATAAAA[C/T]GAGCAGCCATAAACT | 67337 |
rs27615146 | snp | A/G | 0.345679 | 0.230967 | intron-variant | Cstf1 | Mm_Celera | 2:172379237 | GCCAGAATTTACAAG[A/G]GGAAAAATCAAAATG | 67337 |
rs27615147 | snp | C/T | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379184 | ACACAGGTCAGTGGT[C/T]TTAGTCAGTAAATGG | 67337 |
rs27615148 | snp | C/T | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379170 | GCTGAGTTCATGGTA[C/T]ACAGGTCAGTGGTCT | 67337 |
rs27615149 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172379128 | GCAATGGCGACAGAA[A/G]GGGAAACTGAAGAAG | 67337 |
rs27615150 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Cstf1 | Mm_Celera | 2:172378806 | GACACGTTCCTTATT[C/T]CCTAATTCCTAAGTC | 67337 |
rs27615151 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172378617 | AGGTGCTCCTGGCAT[A/G]CAGAAGTGTTCAGAG | 67337 |
rs27615152 | snp | C/G | 0.18 | 0.24 | intron-variant | Cstf1 | Mm_Celera | 2:172378388 | GTGGTGGTTCCACTG[C/G]TTCCTCTTGTGAGGT | 67337 |
rs27615153 | snp | A/C | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172378369 | GTTGGGCTAGAAAAC[A/C]TCTGTGGTGGTTCCA | 67337 |
rs27615154 | snp | C/G | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172378278 | TTTGCCCAGCGCAGT[C/G]GACAGCTCAGGTCTG | 67337 |
rs27615155 | snp | C/T | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172378114 | CCATCCCTAGGTCAG[C/T]GCAGATGGCCTCAGA | 67337 |
rs27615156 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172378045 | TCTCCCGGGGATCGC[A/G]GTGCTGAGCAGGAAT | 67337 |
rs27615157 | snp | C/T | 0.18 | 0.24 | intron-variant | Cstf1 | Mm_Celera | 2:172378019 | CAGGTGCGTGAGAGG[C/T]GCTGCTGGGGTCTCC | 67337 |
rs27615158 | snp | A/G | 0.297521 | 0.245442 | synonymous-codon | Cstf1 | Mm_Celera | 2:172377672 | AGACTTCATCCTGGT[A/G]GGAACTCAGCATCCC | 67337 |
rs27615159 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Cstf1 | Mm_Celera | 2:172377470 | TGCTCATTTGCAAGT[A/G]CAGTTCCTGTCTGGG | 67337 |
rs27615160 | snp | A/G | 0.152778 | 0.230321 | intron-variant | Cstf1 | Mm_Celera | 2:172377434 | TTAATCCATTTGTAG[A/G]GGTCCACTGATTCCA | 67337 |
rs27615161 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Cstf1 | Mm_Celera | 2:172377354 | TAAACTGCTCTGACC[C/T]TCATCGCCTGGGTTT | 67337 |
rs27615162 | snp | G/T | 0.152778 | 0.230321 | intron-variant | Cstf1 | Mm_Celera | 2:172377283 | GTTAGAGTGTTGATC[G/T]CCTGAGAAAAGCATC | 67337 |
rs27615163 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Cstf1 | Mm_Celera | 2:172376652 | GTACCTATACGCCAC[C/T]GAAGTGCTCCATGCA | 67337 |
rs27615164 | snp | A/C/G | 0.42 | 0.183303 | intron-variant | Cstf1 | GRCm38.p3 | 2:172376621 | ACAAAAGAGGAAAGC[A/C/G]CTGCCTTCCCTAAAA | 67337 |
rs27615165 | snp | C/G | 0.473373 | 0.11227 | intron-variant | Cstf1 | Mm_Celera | 2:172376318 | GGTGATCAGCCCTAC[C/G]TGGTACTTAGATAAG | 67337 |
rs27615166 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Cstf1 | Mm_Celera | 2:172376292 | TCTGATACAGTATTT[C/T]AAGTGGTCTCGGTGA | 67337 |
rs27615167 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Cstf1 | Mm_Celera | 2:172376268 | AGACCTAACAGGAGC[A/G]CTTGACTTTCTGATA | 67337 |
rs27629568 | snp | A/G | 0.277778 | 0.248452 | synonymous-codon | Cstf1 | Mm_Celera | 2:172376219 | CGATTATTCCAAACC[A/G]TCTGCAAAAAGAGCT | 67337 |
rs27629569 | snp | A/G | 0.277778 | 0.248452 | synonymous-codon | Cstf1 | Mm_Celera | 2:172376195 | AAGGGATTATACTCT[A/G]AAATTGTTCGATTAT | 67337 |
rs27629570 | snp | C/T | 0.165289 | 0.235211 | synonymous-codon | Cstf1 | Mm_Celera | 2:172376090 | ACAGAACATGGAGAA[C/T]CACCCAGTGATCCGA | 67337 |
rs27629571 | snp | A/G | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172375937 | TTCCCGCCTACCACT[A/G]CTCCAGACAGCGTGG | 67337 |
rs27629572 | snp | A/G | 0.152778 | 0.230321 | synonymous-codon | Cstf1 | Mm_Celera | 2:172375891 | CACAGAAAGAATGTT[A/G]GCCAAAAGTGCCATG | 67337 |
rs27629573 | snp | A/G | 0.260355 | 0.249785 | synonymous-codon | Cstf1 | Mm_Celera | 2:172375798 | TTCCCACAAAGGCCC[A/G]TGCCGCGTGGCCACC | 67337 |
rs27629574 | snp | C/T | 0.152778 | 0.230321 | synonymous-codon | Cstf1 | Mm_Celera | 2:172375759 | GTCACCAGAGGCTTC[C/T]GAGTATGAAACCTGT | 67337 |
rs27629575 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Cstf1 | Mm_Celera | 2:172375478 | TTGTCTGGTTAGAGC[A/G]AGTGAATGGCTGTGG | 67337 |
rs27629576 | snp | A/G | 0.396694 | 0.202437 | intron-variant | Cstf1 | Mm_Celera | 2:172375438 | GATGGAATAATGGCC[A/G]CACTGCTGCTTGCGT | 67337 |
rs27629577 | snp | C/T | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172374592 | TATGTTTAATCCAAC[C/T]CTCTCCTGTTTGTTA | 67337 |
rs27629578 | snp | A/G | 0.42 | 0.183303 | intron-variant | Cstf1 | Mm_Celera | 2:172374570 | ATTTTTATGTGATAC[A/G]TGAGGTTATGTTTAA | 67337 |
rs27629579 | snp | A/G | 0.165289 | 0.235211 | intron-variant | Cstf1 | Mm_Celera | 2:172374507 | AAAGCAGGAGTTGAG[A/G]CCACAAGAGTTCTTG | 67337 |
rs27629580 | snp | A/T | 0.277778 | 0.248452 | intron-variant | Cstf1 | Mm_Celera | 2:172373551 | ATAATTTATAAAGGG[A/T]CCTGGTGCTGGCAAG | 67337 |
rs27629581 | snp | A/T | 0.32 | 0.24 | intron-variant | Cstf1 | Mm_Celera | 2:172373429 | TTGCTTTGTTCTTTG[A/T]CTCAGTTCCACGCCG | 67337 |
rs27629582 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Cstf1 | Mm_Celera | 2:172373271 | TGGAGTCCAGGGGAC[A/G]AAGCTGCTTCTCATA | 67337 |
rs27629583 | snp | C/T | 0.336735 | 0.234472 | synonymous-codon | Cstf1 | Mm_Celera | 2:172373111 | CCCTCGGAGCAGCTC[C/T]TGCATCTCATCAAGC | 67337 |
rs27629584 | snp | G/T | 0.152778 | 0.230321 | utr-variant-5-prime | Cstf1 | Mm_Celera | 2:172372930 | GGTTTCTCTTGCAGC[G/T]GTCAGGGAAACTGTC | 67337 |
rs27629585 | snp | C/T | 0.152778 | 0.230321 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172371854 | AGCTTCGTTTAGTGA[C/T]TGGATGCTAATTAGG | 67337 |
rs27629586 | snp | A/T | 0.152778 | 0.230321 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172371828 | TTCTAATGAACACGA[A/T]TATATTGAATAGCTT | 67337 |
rs27629587 | snp | C/G | 0.165289 | 0.235211 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172371685 | TACATGCATTGGTGT[C/G]TAGGTGGCAGGCCCC | 67337 |
rs27629588 | snp | A/C | 0.432133 | 0.171253 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172371486 | TAGGTCAAATGGTTA[A/C]GTTCTGGGCTCTGGA | 67337 |
rs27629589 | snp | C/T | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172371166 | CCTAGAGTTGGCCGG[C/T]CCGGCCTGCACCCCG | 67337 |
rs27629590 | snp | C/T | 0.498615 | 0.0262793 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172371065 | GGAAGCGGGCTAGTG[C/T]GGTTGGCTAGGGTCT | 67337 |
rs27629591 | snp | A/G | 0.391111 | 0.206368 | upstream-variant-2KB, utr-variant-5-prime | Aurka, Cstf1 | Mm_Celera | 2:172370764 | GTGCTCCCCAGGATC[A/G]GGCGTTCGCCAGTCA | 67337 |
rs27629592 | snp | C/T | 0.465374 | 0.126941 | upstream-variant-2KB, utr-variant-5-prime | Aurka, Cstf1 | Mm_Celera | 2:172370641 | CCGTAAACGCGACTA[C/T]GGGAAGCTCGTTCCC | 67337 |
rs27629593 | snp | A/G | 0.497778 | 0.0332592 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172370603 | GGCTAGAGCCGGAGC[A/G]ATGCCGTTCTGTGAT | 67337 |
rs27629594 | snp | A/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172370290 | TACTCGGTTAGCTGA[A/T]GGTCTGGATCCCCAT | 67337 |
rs27629595 | snp | C/T | 0.497041 | 0.0383476 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172370193 | CATCCACAGACTCGT[C/T]GAGTCGACTTAGACT | 67337 |
rs27629596 | snp | A/G | 0.498615 | 0.0262793 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172370072 | AACTGAGCTTTAGCG[A/G]GTCTGCGCTTTGAAA | 67337 |
rs27629597 | snp | C/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172370015 | CAGCGGCGGCCACCA[C/T]GAAGGCAGTGTTCAA | 67337 |
rs27629598 | snp | A/G | 0.473373 | 0.11227 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369327 | TCTTATCCCTAAGAG[A/G]TTTCTATTTCCTGTA | 67337 |
rs27629599 | snp | C/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369301 | GCTTTCCCATAATAG[C/T]TACACCAGGGTCTTA | 67337 |
rs27629600 | snp | A/G | 0.459184 | 0.136902 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369248 | TACCTCACACTCCTG[A/G]GCCCCAGACCAAGGT | 67337 |
rs27629601 | snp | C/T | 0.497778 | 0.0332592 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369175 | CAGGGTTCCCCTTTT[C/T]AGATCAGGGAAGCTA | 67337 |
rs27629602 | snp | C/T | 0.497778 | 0.0332592 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369077 | AGGAGGAGTCCAAGT[C/T]CTTCACCTTCGGATC | 67337 |
rs29499648 | snp | G/T | 0.375 | 0.216506 | intron-variant | Cstf1 | GRCm38.p3 | 2:172378913 | TTTGTCTTTGTTTTT[G/T]TTTGTTTGTTTGTTT | 67337 |
rs29559287 | snp | A/G | 0.48 | 0.0979796 | downstream-variant-500B, utr-variant-3-prime | Cstf1 | Mm_Celera | 2:172381108 | CTCCTTCTTCACGTC[A/G]AACGGAGGCTTTCTA | 67337 |
rs29626075 | snp | A/G | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172373338 | CAGCTCAGGACTCAC[A/G]GCCCTCTCACCCCTA | 67337 |
rs29717483 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Cstf1 | Mm_Celera | 2:172377039 | TCCTCTCTCTTCTCG[G/T]GAGAACTGGGCACAT | 67337 |
rs29779675 | snp | C/T | 0.375 | 0.216506 | intron-variant | Cstf1 | GRCm38.p3 | 2:172378897 | GTTTGGTTTGGTTTT[C/T]TTTGTCTTTGTTTTT | 67337 |
rs33008684 | snp | A/G | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172372821 | GATAAAACACCTACT[A/G]AAGCTGAGATTGAAG | 67337 |
rs33022625 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172370181 | GGAACTCCCGTTCAT[C/T]CACAGACTCGTCGAG | 67337 |
rs33129718 | snp | A/G | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172373648 | CACTGCTGCTGGGCC[A/G]CTTCCTAGCCTTACT | 67337 |
rs33205416 | snp | C/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | Aurka, Cstf1 | Mm_Celera | 2:172370939 | CTTTGCACGTGCGCA[C/G]TGGGTGTGCACTCCG | 67337 |
rs33292738 | snp | C/G | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172373820 | TGGTGGATCTCCTCC[C/G]TCTTCTCTCAGTCAG | 67337 |
rs33344224 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Cstf1 | Mm_Celera | 2:172375498 | AATGGCTGTGGAGGC[A/G]GAAATCCCCTTTCCC | 67337 |
rs33447008 | snp | C/T | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172378903 | TTTGGTTTTTTTTGT[C/T]TTTGTTTTTGTTTGT | 67337 |
rs33471471 | snp | A/G | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172373613 | ACCCACAGCCTTTAT[A/G]TTTGACATGCCTTAA | 67337 |
rs33620085 | snp | C/T | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172372841 | TGAGATTGAAGTGTG[C/T]GTTACGCCTGGCCTA | 67337 |
rs33763075 | snp | A/G | 0.5 | 0 | intron-variant | Cstf1 | Mm_Celera | 2:172372719 | ATAGTTTCTTTATGC[A/G]CTTTCTGTGCACCAT | 67337 |
rs46189463 | snp | C/T | | | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369622 | AACTCCTGATCCTCC[C/T]GCCTGCAGTTCCGCA | 67337 |
rs46428108 | snp | A/G | | | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369901 | TGTTGAGGTAGGGAC[A/G]TATGTGGATGTAATT | 67337 |
rs46663416 | snp | G/T | | | downstream-variant-500B | Cstf1 | Mm_Celera | 2:172382874 | ATATAAACAGTTCAG[G/T]GGTGAGGGGGCATTT | 67337 |
rs46740002 | snp | C/T | | | intron-variant | Cstf1 | Mm_Celera | 2:172374388 | TTTAAAAATACATGA[C/T]ATTGAAGCAATATAA | 67337 |
rs46745322 | snp | A/G | | | intron-variant, upstream-variant-2KB | Aurka, Cstf1 | Mm_Celera | 2:172369557 | AGAGACAAGAGTTCC[A/G]TGGATCCCAGGCTGG | 67337 |
rs46792350 | snp | A/T | | | intron-variant | Cstf1 | Mm_Celera | 2:172374204 | GGTTGGAGAGATGGC[A/T]CAGCTGTTAAGAGCA | 67337 |
rs46807949 | snp | A/T | | | intron-variant | Cstf1 | Mm_Celera | 2:172374438 | TGGGTTGTATTTAAA[A/T]TTTTTAAACAGCCAG | 67337 |