SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3660780 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Trim2 | Mm_Celera | 3:84289227 | CTGGAGGGACACGGA[C/T]TTAGTTCACAGCAAT | 80890 |
rs3675100 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Trim2 | Mm_Celera | 3:84289369 | GAGGTACTTCACACC[A/G]TTGGCATTCCAGACA | 80890 |
rs3675686 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Trim2 | Mm_Celera | 3:84289434 | GCATTAAAATCTTTA[C/T]AGTAGCTGAAGAGAT | 80890 |
rs3680022 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim2 | Mm_Celera | 3:84283987 | TTTGTCACACTCAGT[C/T]CTGTGAAACTGCTGC | 80890 |
rs3680611 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim2 | Mm_Celera | 3:84284030 | CCCATCGGAACTCTC[C/T]GGAACAGAGACATTG | 80890 |
rs3680673 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim2 | Mm_Celera | 3:84284064 | CTGCTTCTCTCGCTC[C/T]GCCTCTAGCTCTCGG | 80890 |
rs3681950 | snp | A/C | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84284253 | AACCAGCGGCTGAAG[A/C]TGTCTAGTCGGCAAG | 80890 |
rs3681991 | snp | A/G | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84284277 | CGGCAAGTGAGACGG[A/G]GCAGAGTCCCCGTCC | 80890 |
rs3682638 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84284388 | TGCATTGAGTCTTGA[C/T]TGATGTAACTGAGAG | 80890 |
rs6170577 | snp | C/T | 0.495868 | 0.0452663 | intron-variant | Trim2 | Mm_Celera | 3:84208491 | GTGATGTGCTGACAA[C/T]GGGCCACTTTGCAGA | 80890 |
rs6171085 | snp | C/T | 0.495868 | 0.0452663 | intron-variant | Trim2 | Mm_Celera | 3:84208576 | TAATCTGTCCTCACA[C/T]GGGCTCTATCTGCTG | 80890 |
rs6171566 | snp | A/G | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84208620 | TGCGCTTAAGGAAAG[A/G]AAAATGCCATAGACT | 80890 |
rs6171620 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84208660 | TCTAGAGCGCTGACA[C/T]CCACAGTGTGGTTGG | 80890 |
rs6172685 | snp | C/G/T | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84208822 | TTTAGCAATTGGGGG[C/G/T]GGGGAGGGATGTCAA | 80890 |
rs6183172 | snp | A/G | 0.431413 | 0.172016 | intron-variant, upstream-variant-2KB | Trim2 | Mm_Celera | 3:84221652 | TAACCAATATTTCAG[A/G]ATCAAAGGCATACAT | 80890 |
rs6250901 | snp | A/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84256477 | TACAGTGTGTTAGGC[A/T]AAATGGAAACAGTGA | 80890 |
rs6251402 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84192671 | CCCATGGTAGAGAAC[C/T]GCTATATTCTAAGTG | 80890 |
rs6264062 | snp | A/C | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84192718 | TTTTTTTCTTCCAAC[A/C]ACATAAACTTTGAAG | 80890 |
rs6264132 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84192767 | AACTCTTGTAAGTTT[C/T]CAAGTTCCTTCAGGT | 80890 |
rs6264666 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84192887 | TTAGTTTCTCTCATA[C/T]AGGACATGNCTACTA | 80890 |
rs6264679 | snp | A/G | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84192896 | CTCATANAGGACATG[A/G]CTACTATATTCATTT | 80890 |
rs6306184 | snp | A/G | 0.5 | 0 | utr-variant-3-prime | Trim2 | GRCm38.p3 | 3:84162181 | AAATACAGTGAACAC[A/G]CACAGGTACCCAGGT | 80890 |
rs6319349 | snp | C/T | 0.432133 | 0.171253 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84239995 | CTTGTTTCTGGCCGT[C/T]ACTTGCTTTTGCATT | 80890 |
rs6319926 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84240105 | AAGCAGCATTTTAGC[C/T]GGGCAGTGGTGGCAC | 80890 |
rs6320332 | snp | A/G | 0.5 | 0 | utr-variant-3-prime | Trim2 | GRCm38.p3 | 3:84162525 | TCCATCTCCAGCACC[A/G]CAAAACAAAGAACCA | 80890 |
rs6320903 | snp | A/G | 0.5 | 0 | utr-variant-3-prime | Trim2 | Mm_Celera | 3:84162624 | cacgccattaatccc[A/G]gcacttgggagtcag | 80890 |
rs13468633 | snp | A/G | 0.375 | 0.216506 | utr-variant-3-prime | Trim2 | GRCm38.p3 | 3:84160522 | TCTGTCTTGAAACAC[A/G]GGAGAAACAAGACTC | 80890 |
rs29974785 | snp | A/G | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84295153 | TGTGCAGGTATGCAT[A/G]TGGCTGTGTGTGTGT | 80890 |
rs29979513 | snp | G/T | 0.429688 | 0.173817 | intron-variant | Trim2 | GRCm38.p3 | 3:84179467 | AGACAGTCCTGCATC[G/T]TGAAGGAAACTCCTG | 80890 |
rs30005821 | snp | A/C/T | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84206986 | CCCTGACAGCTCCAG[A/C/T]GCCATGCTTGCCTGC | 80890 |
rs30013276 | snp | A/T | 0.336735 | 0.234472 | intron-variant | Trim2 | GRCm38.p3 | 3:84196340 | AGAGCCCATCACTCT[A/T]GGGTTGCCAGCCCTC | 80890 |
rs30013756 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84297960 | CCTCTTCCTACTCCT[A/C]TTTTTCCTCTCTCTC | 80890 |
rs30014459 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84237921 | TGGATTCAGGATCAC[C/T]GTGGAAACACATTTT | 80890 |
rs30014552 | snp | G/T | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84176707 | TGCCACTGGGAGGCC[G/T]TAGGGTCCCGCGGAA | 80890 |
rs30016168 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84180700 | CTTGGGACCAGTGAA[C/T]GTGCCTGTGAGTGGG | 80890 |
rs30017331 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84301001 | ATCAACCTAATTGTG[C/T]ACTGACAGATGAATG | 80890 |
rs30028673 | snp | C/G | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84217577 | TGTGTGTGTGTGTGT[C/G]TGTCTCTCTCTCTCT | 80890 |
rs30058368 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84176751 | CAGGGGCACAGCCCT[A/G]AAGGAGGCTGTGGGA | 80890 |
rs30065815 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim2 | GRCm38.p3 | 3:84297229 | AATGAGAAGGGTAGC[A/G]AAAGAGATGGCTCCG | 80890 |
rs30102191 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84219837 | AGGAGGAGGAGGGAG[A/T]GGAAAAAAAAAAAAC | 80890 |
rs30105795 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84239591 | ATAAAGCCACCAATA[C/T]ATACACAGAGGACCT | 80890 |
rs30106803 | snp | A/T | 0.375 | 0.216506 | intron-variant | Trim2 | GRCm38.p3 | 3:84301524 | CGGAACAGAAACAAT[A/T]CAGAGCCAAGTCAAA | 80890 |
rs30106940 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim2 | Mm_Celera | 3:84203598 | CTTTCTTTCTTTTTT[C/T]CTTCCTTCCTTCCTT | 80890 |
rs30107260 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim2 | Mm_Celera | 3:84287966 | GATCTCCACAGTAAA[C/T]TTCTGGCAGTTAACT | 80890 |
rs30107436 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84226019 | GACAGAGCACCCCAA[C/T]TGAAGACATGTTTTG | 80890 |
rs30108568 | snp | C/T | 0.475309 | 0.108333 | intron-variant, nc-transcript-variant | Trim2, LOC105244477 | GRCm38.p3 | 3:84247040 | GCTCTGGGGCAGAAA[C/T]GATGGCATGTCATGG | 80890 |
rs30112009 | snp | C/G | 0.497778 | 0.0332592 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | Trim2 | Mm_Celera | 3:84220919 | GCAGCGAGCTGCAAA[C/G]AGATTCGCGGGTGGC | 80890 |
rs30113011 | snp | A/G | 0.5 | 0 | synonymous-codon | Trim2 | Mm_Celera | 3:84192180 | GGTGGAGTGGATGTC[A/G]TCCACAATGCTGGCC | 80890 |
rs30113286 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84195310 | AGGAAATTTGAACCT[C/T]CCAAGGGAAGACTGA | 80890 |
rs30114801 | snp | A/G | 0.484429 | 0.0868505 | intron-variant | Trim2 | GRCm38.p3 | 3:84197935 | GGAACACAGCCTAGC[A/G]CCAAATATGTAATAG | 80890 |
rs30116254 | snp | C/G | 0.391111 | 0.206368 | intron-variant | Trim2 | Mm_Celera | 3:84171422 | ATTTCTCCGTACAAG[C/G]AGTGCAGAGTTAACA | 80890 |
rs30116345 | snp | A/G | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84294302 | ACAAAAGAACCTCAC[A/G]GGCAGAGAACACGCG | 80890 |
rs30157558 | snp | C/T | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84304143 | AGAACTCTGAAATCC[C/T]CCCGGGATCCAGACC | 80890 |
rs30162778 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84282982 | GCAAAACATTCATTC[A/G]CATAAAATAAACCTG | 80890 |
rs30167337 | snp | C/T | 0.486111 | 0.0821678 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | Trim2 | Mm_Celera | 3:84221289 | AAACAATGCAGATTG[C/T]TTGAAATGTAAAATC | 80890 |
rs30174164 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim2 | GRCm38.p3 | 3:84202669 | CACATGGAGCAAAAC[C/T]AGAACTATAAGCACA | 80890 |
rs30201352 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84296245 | ACTTGTTTACACAGT[C/T]GAAAGCACACCTTTT | 80890 |
rs30203713 | snp | C/T | 0.5 | 0 | intron-variant, utr-variant-3-prime | Trim2 | Mm_Celera | 3:84191527 | TAAGAGAAGAAAGGA[C/T]TCTACCAACAGCAAA | 80890 |
rs30205406 | snp | A/G | 0.375 | 0.216506 | intron-variant | Trim2 | Mm_Celera | 3:84175844 | GAGCTTCCTGTACCT[A/G]TGGCCGTTATATGGA | 80890 |
rs30208583 | snp | C/T | 0.375 | 0.216506 | upstream-variant-2KB | Trim2 | GRCm38.p3 | 3:84306906 | GTCATCATGTCTTAA[C/T]ACAGCAATAGAAAAG | 80890 |
rs30213317 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim2 | Mm_Celera | 3:84301613 | TATCTTGAATTATTT[C/T]GCCACCCAACAAAGA | 80890 |
rs30222717 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84283881 | GCTGTCTTCTTGGGG[G/T]GCTTGACTGGGTACA | 80890 |
rs30253491 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84195727 | TGTAAACTTTTTTTT[A/T]AAAAAAATGTCTTCC | 80890 |
rs30253608 | snp | A/G | 0.465374 | 0.126941 | utr-variant-3-prime | Trim2 | Mm_Celera | 3:84164501 | ACGATCTTTGATCAA[A/G]CCCAGGAAATTTGGG | 80890 |
rs30253614 | snp | C/T | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | Trim2 | Mm_Celera | 3:84213906 | ATGAAATTTCTTAAG[C/T]CAACACTTTTAAGCT | 80890 |
rs30253966 | snp | C/T | 0.387812 | 0.208586 | intron-variant | Trim2 | Mm_Celera | 3:84267208 | GCATTCTGAAGGCAT[C/T]TATCTGTTTCCTATC | 80890 |
rs30256554 | snp | A/G | 0.375 | 0.216506 | intron-variant | Trim2 | GRCm38.p3 | 3:84186365 | CCCCTGATTCCAATC[A/G]TCATCTAGAATTCCT | 80890 |
rs30257661 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim2 | Mm_Celera | 3:84295483 | TGGCTGTGGTGTGCG[C/T]CAGTGGTAGGCTGCT | 80890 |
rs30261540 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | Trim2 | Mm_Celera | 3:84270814 | GCCAAGGGGAGGGAG[A/G]GGCTGTGGTATCAAG | 80890 |
rs30271449 | snp | C/T | 0.345679 | 0.230967 | intron-variant, nc-transcript-variant | Trim2, LOC105244477 | Mm_Celera | 3:84242193 | CTATGTGACAGTTTC[C/T]CCATTTAGATTCATG | 80890 |
rs30276535 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84194326 | TGGTAGTATCCATGA[C/T]AGTAACAGGCTCCAC | 80890 |
rs30308351 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim2 | GRCm38.p3 | 3:84180210 | GAGAGAATGCATGCA[C/T]GCATGCACACACGCA | 80890 |
rs30309737 | snp | C/G | 0.401235 | 0.199068 | intron-variant | Trim2 | Mm_Celera | 3:84216793 | AGCTTTGTGGCACTC[C/G]TGGGTCAGTATTAGT | 80890 |
rs30315309 | snp | A/C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84189666 | AGGGGAGGCAGGCTG[A/C/T]GGGTAAAGACAGAAC | 80890 |
rs30316058 | snp | A/G | 0.33241 | 0.236027 | intron-variant | Trim2 | Mm_Celera | 3:84215956 | ACTGTGACAAAGCAT[A/G]CTTGTTGTGAATGCT | 80890 |
rs30330167 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim2 | Mm_Celera | 3:84254019 | TGACCAAAGACACAC[A/G]GGGAAGCTAACAAGA | 80890 |
rs30350924 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84237565 | TGGCTGGCACAGCAT[C/T]CATGCAACTCAGCAC | 80890 |
rs30354653 | snp | A/C | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | Trim2, Gm6525 | Mm_Celera | 3:84172961 | AGTACAGAAATATAC[A/C]TCAAAGTTCAAAGCA | 80890 |
rs30356937 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim2 | Mm_Celera | 3:84203595 | TTTCTTTCTTTCTTT[C/T]TTCCTTCCTTCCTTC | 80890 |
rs30357914 | snp | C/T | 0.46875 | 0.121031 | intron-variant | Trim2 | GRCm38.p3 | 3:84296619 | CCTTATAACAGCCTG[C/T]GGTGATCAGGATGGC | 80890 |
rs30367455 | snp | A/C | 0.495 | 0.0497494 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84237665 | GTAACGTCACCATCA[A/C]TGCCCAGAAGAATAT | 80890 |
rs30401094 | snp | A/T | 0.415225 | 0.187619 | intron-variant | Trim2 | GRCm38.p3 | 3:84296103 | TAAATGAGTCACTTT[A/T]TAAGTGTTGCACAAA | 80890 |
rs30401288 | snp | A/G | 0.387812 | 0.208586 | intron-variant | Trim2 | Mm_Celera | 3:84216389 | AGGAGAGAAGGCTGC[A/G]TCTGCAATCCTGAGA | 80890 |
rs30402502 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84282914 | CCAGTTCTGGGGGAT[C/T]CAATGCCCTCTGAGG | 80890 |
rs30408162 | snp | G/T | 0.5 | 0 | intron-variant | Trim2 | GRCm38.p3 | 3:84176147 | AGAAGGAAGTAATGT[G/T]GTGGCAACTAAACAC | 80890 |
rs30409046 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84231464 | AGTGTCTGTAATGTG[A/G]AGGGCACCGTGCTGG | 80890 |
rs30412313 | snp | A/T | 0.444444 | 0.157135 | intron-variant, downstream-variant-500B | Trim2, Gm6525 | Mm_Celera | 3:84175200 | CAGAAATTATATATA[A/T]AAAAAAAAAAAGACC | 80890 |
rs30414100 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84189611 | TAACAAACTGTGCAG[C/T]AGCACTCTCAGGCCC | 80890 |
rs30451174 | snp | A/C/G | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84171751 | TCTGACCTCACCCCA[A/C/G]CAAGCCTTAGAAGTG | 80890 |
rs30452598 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Trim2 | Mm_Celera | 3:84296806 | TCTCTGCTTCCCTCT[C/G]CAGTTATTAGCAACC | 80890 |
rs30453058 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Trim2, LOC105244477 | Mm_Celera | 3:84230126 | TAATAAGAGGATGGC[A/G]ACTAATCTTGGTTGA | 80890 |
rs30453060 | snp | G/T | 0.375 | 0.216506 | intron-variant | Trim2 | Mm_Celera | 3:84284910 | TATCATTTTTTGGGA[G/T]AGGGGAAGCTATGTT | 80890 |
rs30455933 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim2 | GRCm38.p3 | 3:84183549 | TTGAGTTCCAGGCCA[A/G]ACTGGTCTACAGTAA | 80890 |
rs30458062 | snp | C/T | 0.375 | 0.216506 | downstream-variant-500B | Trim2 | Mm_Celera | 3:84159950 | AAGAATAGACATACA[C/T]ACTTACCATCAAGCT | 80890 |
rs30460365 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim2 | Mm_Celera | 3:84203594 | CTTTCTTTCTTTCTT[C/T]TTTCCTTCCTTCCTT | 80890 |
rs30460922 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Trim2 | GRCm38.p3 | 3:84304457 | CACCTCCAGGCTAGG[C/T]TTGGTGACTTGGGTC | 80890 |
rs30463736 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Trim2, LOC105244477 | Mm_Celera | 3:84226786 | CTCCATGCCTCTTTG[C/T]TCAGCGGAGAAACCA | 80890 |
rs30470829 | snp | A/C/G | 0.456747 | 0.140554 | intron-variant, upstream-variant-2KB | Trim2 | GRCm38.p3 | 3:84221503 | GTTTCAGTTAAGGAT[A/C/G]GAGAAACCTGACAAA | 80890 |
rs30495308 | snp | C/T | 0.429688 | 0.173817 | upstream-variant-2KB, intron-variant | Trim2 | Mm_Celera | 3:84271494 | GGCAGCTCATTGTGC[C/T]GAGTCTCTAATCTCA | 80890 |
rs30498405 | snp | G/T | 0.5 | 0 | intron-variant | Trim2 | Mm_Celera | 3:84279469 | ACTGTAGAAGGCTAA[G/T]CAGTATCTCTGGCTT | 80890 |