DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 66568 Rwdd3 aucucguCGUUUA-UUACUAAGc |:|| | |||||||: uuuucucGUAAUUAAAUGAUUUc 2 16 186 208 [mm9:3:120858769-120858791:-] 0.5895 138 0 -7.98 -0.4099 MIMAT0000129 mmu-miR-30a* 66568 Rwdd3 cgACGUUUGUAGGCUG-ACUUUc || :||:||: || ||||| uaUG-GAAUAUUAAACAUGAAAa 2 21 23 44 [mm9:3:120858933-120858954:-] 0.5057 122 0 -8.97 -1.1680 MIMAT0000129 mmu-miR-30a* 66568 Rwdd3 cgACGUUUGUAGGCUG-ACUUUc || :||:||: || ||||| uaUG-GAAUAUUAAACAUGAAAa 2 21 152 173 [mm9:3:120858933-120858954:-] 0.5057 122 0 -8.97 -1.1300 MIMAT0004524 mmu-miR-30b* 66568 Rwdd3 cugcAUUUGUA--GGUGUAGGGUc ||||||| | |||||| auauUAAACAUGAAAAGAUCCCAu 2 19 29 52 [mm9:3:120858925-120858948:-] 0.5418 129 6 -13.77 -0.2110 MIMAT0004524 mmu-miR-30b* 66568 Rwdd3 cugcAUUUGUA--GGUGUAGGGUc ||||||| | |||||| auauUAAACAUGAAAAGAUCCCAu 2 19 158 181 [mm9:3:120858925-120858948:-] 0.5418 129 6 -13.77 -0.1937 MIMAT0004534 mmu-miR-145* 66568 Rwdd3 guUCUUGUCAUA--AAGGUCCUUa | | || | | ||:|||||| caAAAUCAUUCUCAUUUCAGGAAg 2 21 111 134 [mm9:3:120858972-120858995:-] 0.6264 139 6 -10.94 -0.1298 MIMAT0000249 mmu-miR-30e* 66568 Rwdd3 cgACAUUUGUAGGCUG-ACUUUc || :||:||: || ||||| uaUG-GAAUAUUAAACAUGAAAa 2 21 23 44 [mm9:3:120858933-120858954:-] 0.5057 122 0 -8.97 -1.1680 MIMAT0000249 mmu-miR-30e* 66568 Rwdd3 cgACAUUUGUAGGCUG-ACUUUc || :||:||: || ||||| uaUG-GAAUAUUAAACAUGAAAa 2 21 152 173 [mm9:3:120858933-120858954:-] 0.5057 122 0 -8.97 -1.1300 MIMAT0000376 mmu-miR-298 66568 Rwdd3 cccuucuugucgggagGAGACGg |||||| gacaauuuguuuagaaCUCUGCa 2 8 150 172 [mm9:3:120858805-120858827:-] 0.5895 120 6 -15.05 -0.4047 MIMAT0000376 mmu-miR-298 66568 Rwdd3 cccuucuugucgggagGAGACGg |||||| gacaauuuguuuagaaCUCUGCa 2 8 279 301 [mm9:3:120858805-120858827:-] 0.5895 120 6 -15.05 -0.3564 MIMAT0004628 mmu-miR-21* 66568 Rwdd3 cugUCGGGUA-GCUGACGACAAc |||: | | |:||:|||| uaaAGCUAUUACUAUUGUUGUUa 2 20 15 37 [mm9:3:120873973-120873995:-] 0.5006 138 0 -13.58 -0.2699 MIMAT0004666 mmu-miR-33* 66568 Rwdd3 cacUACGUGACACCUUUGUAac ||| | | | |||||| uuuAUGGAAUAU-UAAACAUga 3 20 150 170 [mm9:3:120858936-120858956:-] 0.5232 129 0 -6.53 -0.1175 MIMAT0004670 mmu-miR-7a* 66568 Rwdd3 auaccgucugacacUAAACAAc ||||||| uuuuuauagagacaAUUUGUUu 2 9 140 161 [mm9:3:120858816-120858837:-] 0.6012 140 7 -7.36 -1.0040 MIMAT0004670 mmu-miR-7a* 66568 Rwdd3 auaccgucugacacUAAACAAc ||||||| uuuuuauagagacaAUUUGUUu 2 9 269 290 [mm9:3:120858816-120858837:-] 0.6012 140 7 -7.36 -0.9854 MIMAT0000742 mmu-miR-378* 66568 Rwdd3 uguguccuggaccucAGUCCUc |||||| aaaaucauucucauuUCAGGAa 2 8 112 133 [mm9:3:120858973-120858994:-] 0.6264 120 6 -11.04 -0.1258 MIMAT0004691 mmu-miR-382* 66568 Rwdd3 uuuuucacaacaggCACUUACu ||||||| -------------gGUGAAUGa 2 9 1 9 [mm9:3:120859097-120859105:-] 0.6278 140 7 -10.81 -0.6639 MIMAT0004704 mmu-miR-335-3p 66568 Rwdd3 ccAGU-CCUCGUUAU---UACUUUUu |:| ||| :| || ||||||| uuUUAUGGAAUAUUAAACAUGAAAAg 2 21 20 45 [mm9:3:120858932-120858957:-] 0.5414 150 7 -8.18 -0.8294 MIMAT0004704 mmu-miR-335-3p 66568 Rwdd3 ccAGU-CCUCGUUAU---UACUUUUu |:| ||| :| || ||||||| uuUUAUGGAAUAUUAAACAUGAAAAg 2 21 149 174 [mm9:3:120858932-120858957:-] 0.5414 150 7 -8.18 -0.7879 MIMAT0001422 mmu-miR-434-3p 66568 Rwdd3 uccucagcucacuaCCAAGUUu ||||||| gccagaaaagacuaGGUUCAAu 2 9 67 88 [mm9:3:120858889-120858910:-] 0.5778 140 7 -8.88 -0.9625 MIMAT0001422 mmu-miR-434-3p 66568 Rwdd3 uccucagcucacuaCCAAGUUu ||||||| gccagaaaagacuaGGUUCAAu 2 9 196 217 [mm9:3:120858889-120858910:-] 0.5778 140 7 -8.88 -0.9412 MIMAT0002110 mmu-miR-469 66568 Rwdd3 ccuGUGGUUCUAGUUACU-UUCUC-CGu ||:::| | :|:| | ||||| || gcuCAUUGA-AGUAGUCAUAAGAGAGCa 2 24 65 91 [mm9:3:120859015-120859041:-] 0.5802 120 0 -15.11 -1.1714 MIMAT0003186 mmu-miR-369-3p 66568 Rwdd3 uuucuaguugguacAUAAUAa |||||| auuacuauuguuguUAUUAUu 2 8 22 42 [mm9:3:120873968-120873988:-] 0.5006 120 6 -6.79 -0.1439 MIMAT0003373 mmu-miR-302b* 66568 Rwdd3 ucuuucguaaggguacAAUUUCa |||||| guaauuaaaugauuucUUAAAG- 2 8 193 214 [mm9:3:120858763-120858784:-] 0.5895 120 6 -3.78 -0.4384 MIMAT0003375 mmu-miR-302c* 66568 Rwdd3 cguccauugggguacAAUUUCg |||||| uaauuaaaugauuucUUAAAG- 2 8 194 214 [mm9:3:120858763-120858783:-] 0.5895 120 6 -5.80 -0.4351 MIMAT0003731 mmu-miR-671-5p 66568 Rwdd3 gaGGUCGGGGAGGUCCCGAAGGa :|| :|:: :| ||||||| uuUCAUUCUUGUCUUGGCUUCCg 2 22 64 86 [mm9:3:120873924-120873946:-] 0.5006 153 7 -21.79 -0.7455 MIMAT0003897 mmu-miR-759 66568 Rwdd3 caguUUUAACAAA-CGUGAGACg || |||||| | |||||| agacAAUUUGUUUAGAACUCUGc 2 19 149 171 [mm9:3:120858806-120858828:-] 0.5895 141 6 -18.91 -0.1977 MIMAT0003897 mmu-miR-759 66568 Rwdd3 caguUUUAACAAA-CGUGAGACg || |||||| | |||||| agacAAUUUGUUUAGAACUCUGc 2 19 278 300 [mm9:3:120858806-120858828:-] 0.5895 141 6 -18.91 -0.1699 MIMAT0003464 mmu-miR-686 66568 Rwdd3 agaaguggcAGACCCUUCGUUa ||| ||||||| ucugaaauuUCUCUGAAGCAAa 2 14 93 114 [mm9:3:120858992-120859013:-] 0.6264 149 7 -13.72 -1.2510 MIMAT0003470 mmu-miR-691 66568 Rwdd3 aaaAGACGGAGAGAAGUCCUUa || :||| :|||||||| aaaUCAUUCUCAUUUCAGGAAg 2 20 113 134 [mm9:3:120858972-120858993:-] 0.6264 163 7 -17.81 -1.0506 MIMAT0003471 mmu-miR-692 66568 Rwdd3 cucACUCCGCGAGU-UUCUCUa ||| |: ||| |||||| cauUGAAGUAGUCAUAAGAGAg 2 19 68 89 [mm9:3:120859017-120859038:-] 0.5802 126 6 -10.75 -0.5927 MIMAT0004189 mmu-miR-693-3p 66568 Rwdd3 aauGUCGGUGUAGACUUUCGAcg :| :::: |: |||||| uauUAAUUGUUUUAAAAAGCUaa 3 21 39 61 [mm9:3:120873949-120873971:-] 0.5006 124 0 -6.39 -0.3603 MIMAT0003474 mmu-miR-694 66568 Rwdd3 gaAGUCCGUUGUAAAAGuc |||||| | |||||| uuUCAGGCUA-AUUUUCuc 3 18 175 192 [mm9:3:120858785-120858802:-] 0.5895 143 0 -16.53 -0.1179 MIMAT0003474 mmu-miR-694 66568 Rwdd3 gaagucCGUUGUAAAAGUc ||| ||||||| aacucuGCA--AUUUUCAg 2 14 164 180 [mm9:3:120858797-120858813:-] 0.5895 142 7 -10.72 -0.7598 MIMAT0003474 mmu-miR-694 66568 Rwdd3 gaagucCGUUGUAAAAGUc ||| ||||||| aacucuGCA--AUUUUCAg 2 14 293 309 [mm9:3:120858797-120858813:-] 0.5895 142 7 -10.72 -0.7796 MIMAT0003484 mmu-miR-720 66568 Rwdd3 accuccggggUCGCUCua |||||| --ggaagaaaAGCGAGuc 3 9 1 16 [mm9:3:120858961-120858975,120859105-120859105:-] 0.6296 120 0 -13.88 -0.1995 MIMAT0003496 mmu-miR-706 66568 Rwdd3 aaAAAACUCUGUCCCAAAGAGa |||| ||:| |||||| aaUUUUCAGGCUAAUUUUCUCg 2 21 172 193 [mm9:3:120858784-120858805:-] 0.5895 132 6 -10.72 -0.3002 MIMAT0003496 mmu-miR-706 66568 Rwdd3 aaAAAACUCUGUCCCAAAGAGa |||| ||:| |||||| aaUUUUCAGGCUAAUUUUCUCg 2 21 301 322 [mm9:3:120858784-120858805:-] 0.5895 132 6 -10.72 -0.2593 MIMAT0004839 mmu-miR-743b-5p 66568 Rwdd3 acuacCUGUGGUCAGACUUgu || |:: |||||| aaucuGAAAUUUCUCUGAAgc 3 17 91 111 [mm9:3:120858995-120859015:-] 0.6264 128 0 -7.91 -0.1353 MIMAT0004841 mmu-miR-871 66568 Rwdd3 guacuGACCGUGAUUAGACUUau ||| |:| |||||| gcaauCUGAAAUUUCUCUGAAgc 3 19 89 111 [mm9:3:120858995-120859017:-] 0.6264 134 0 -13.26 -0.1367 MIMAT0004883 mmu-miR-466g 66568 Rwdd3 acaCACACGUACACAGACAUa | || :|| ||||||| ---GAGUUUAU-AGUCUGUAa 2 19 1 17 [mm9:3:120873993-120874009:-] 0.5006 148 7 -10.21 -1.1540 MIMAT0004938 mmu-miR-875-3p 66568 Rwdd3 guAUC-GGAGUC-AUAAAAGUCc ||| ||| | |||||||| uuUAGAACUCUGCAAUUUUCAGg 2 20 159 181 [mm9:3:120858796-120858818:-] 0.5895 153 7 -16.77 -0.9770 MIMAT0004938 mmu-miR-875-3p 66568 Rwdd3 guAUC-GGAGUC-AUAAAAGUCc ||| ||| | |||||||| uuUAGAACUCUGCAAUUUUCAGg 2 20 288 310 [mm9:3:120858796-120858818:-] 0.5895 153 7 -16.77 -0.7683 MIMAT0005856 mmu-miR-1195 66568 Rwdd3 acucguccGACCGGAGCUUGAGu :| |::| |||||| agagacaaUUUGUUUAGAACUCu 2 16 147 169 [mm9:3:120858808-120858830:-] 0.5895 123 6 -14.73 -0.1011 MIMAT0007872 mmu-miR-1906 66568 Rwdd3 ucgGGACGGAGUC----CGACGACGu |||| :|: | ||||||| cagCCUGGUUUUGAUUUCCUGCUGCc 2 20 28 53 [mm9:3:120859053-120859078:-] 0.5341 142 7 -20.75 -0.3284 MIMAT0009397 mmu-miR-1933-3p 66568 Rwdd3 uaucagugugacuacCAGGACc |||||| --ggaagaaaagcgaGUCCUGu 2 8 1 20 [mm9:3:120858957-120858975,120859105-120859105:-] 0.6296 120 6 -10.08 -0.2262 MIMAT0009399 mmu-miR-1935 66568 Rwdd3 ucucUAGGC-GGUC-GGAGACGga ||::| ::|| |||||| gacaAUUUGUUUAGAACUCUGCaa 3 19 150 173 [mm9:3:120858804-120858827:-] 0.5895 128 0 -16.08 -0.3354 MIMAT0009399 mmu-miR-1935 66568 Rwdd3 ucucUAGGC-GGUC-GGAGACGga ||::| ::|| |||||| gacaAUUUGUUUAGAACUCUGCaa 3 19 279 302 [mm9:3:120858804-120858827:-] 0.5895 128 0 -16.08 -0.3141 MIMAT0011221 mmu-miR-2145 66568 Rwdd3 uugguccgggcUGGGACGa ||:|||| auuuguuuagaACUCUGCa 2 9 154 172 [mm9:3:120858805-120858823:-] 0.5895 124 0 -10.54 -0.1352 MIMAT0011221 mmu-miR-2145 66568 Rwdd3 uugguccgggcUGGGACGa ||:|||| auuuguuuagaACUCUGCa 2 9 283 301 [mm9:3:120858805-120858823:-] 0.5895 124 0 -10.54 -0.1159 MIMAT0000128 mmu-miR-30a 66568 Rwdd3 gaaggucagcuccuACAAAUgu |||||| uuauagagacaauuUGUUUAga 3 9 143 164 [mm9:3:120858813-120858834:-] 0.6012 120 0 -5.82 -0.1037 MIMAT0000130 mmu-miR-30b 66568 Rwdd3 ucgacucacauccuACAAAUgu |||||| uuauagagacaauuUGUUUAga 3 9 143 164 [mm9:3:120858813-120858834:-] 0.6012 120 0 -7.28 -0.1047 MIMAT0000139 mmu-miR-127 66568 Rwdd3 ucgguucgaguCUG-CCUAGGCu ||| ||||||| ----ggugaauGACAGGAUCCGu 2 12 1 19 [mm9:3:120859087-120859105:-] 0.6278 146 7 -18.99 -0.7478 MIMAT0000163 mmu-miR-153 66568 Rwdd3 cuagUGAA-AACAC-UGAUACGUu |:|| || | ||| |||| gacaAUUUGUUUAGAACUCUGCAa 2 19 150 173 [mm9:3:120858804-120858827:-] 0.5895 120 0 -10.70 -0.1191 MIMAT0000163 mmu-miR-153 66568 Rwdd3 cuagUGAA-AACAC-UGAUACGUu |:|| || | ||| |||| gacaAUUUGUUUAGAACUCUGCAa 2 19 279 302 [mm9:3:120858804-120858827:-] 0.5895 120 0 -10.70 -0.1101 MIMAT0000209 mmu-miR-129-5p 66568 Rwdd3 cguucGGGUCUGGCGUUUUuc |:| || |||||| aauuuCUCUGA-AGCAAAAuc 3 17 98 117 [mm9:3:120858989-120859008:-] 0.6264 126 0 -10.01 -0.1200 MIMAT0000211 mmu-miR-182 66568 Rwdd3 gccacacucAAGAUGGU-AACGGUUu ||||| |: ||||||: ucccauauaUUCUAACGUUUGCCAGa 2 17 47 72 [mm9:3:120858905-120858930:-] 0.5778 143 0 -16.08 -0.1454 MIMAT0000211 mmu-miR-182 66568 Rwdd3 gccacacucAAGAUGGU-AACGGUUu ||||| |: ||||||: ucccauauaUUCUAACGUUUGCCAGa 2 17 176 201 [mm9:3:120858905-120858930:-] 0.5778 143 0 -16.08 -0.1411 MIMAT0000221 mmu-miR-191 66568 Rwdd3 gucGACGAAAACCCUAAGGCAAc || | || || ||||||| auuCUUGUCUU-GGCUUCCGUUa 2 21 68 89 [mm9:3:120873921-120873942:-] 0.5006 154 7 -13.70 -0.4265 MIMAT0000236 mmu-miR-203 66568 Rwdd3 gaucaccAGGAUUUGUAAAGUg || | ||||||| agcaaaaUCAUUCUCAUUUCAg 2 16 109 130 [mm9:3:120858976-120858997:-] 0.6264 143 7 -7.83 -0.6852 MIMAT0000238 mmu-miR-205 66568 Rwdd3 gucugaggCCACCUUACU-UCCu ||| |||||| ||| --------GGU-GAAUGACAGGa 2 15 1 14 [mm9:3:120859092-120859105:-] 0.6278 120 0 -14.95 -0.5508 MIMAT0000248 mmu-miR-30e 66568 Rwdd3 gaaggUCAGUUCCUACAAAUgu || ||| |||||| uauagAGACAA-UUUGUUUAga 3 18 144 164 [mm9:3:120858813-120858833:-] 0.6012 127 0 -6.86 -0.1016 MIMAT0000514 mmu-miR-30c 66568 Rwdd3 cgacUCUCACAUCCUACAAAUgu |||| | |||||| uuauAGAG-ACAAUUUGUUUAga 3 20 143 164 [mm9:3:120858813-120858834:-] 0.6012 121 0 -8.25 -0.1047 MIMAT0000515 mmu-miR-30d 66568 Rwdd3 gaaggucagccccuACAAAUgu |||||| uuauagagacaauuUGUUUAga 3 9 143 164 [mm9:3:120858813-120858834:-] 0.6012 120 0 -5.34 -0.1047 MIMAT0000530 mmu-miR-21 66568 Rwdd3 aguugUAGUCAGACUAUUCGAu ||:: |:| | ||||| uauuaAUUGUUUUAAAAAGCUa 2 18 39 60 [mm9:3:120873950-120873971:-] 0.5006 125 0 -8.26 -0.1081 MIMAT0000539 mmu-miR-92a 66568 Rwdd3 guccggcccuguucACGUUAu |||||| uuuguuuagaacucUGCAAUu 2 8 155 175 [mm9:3:120858802-120858822:-] 0.5895 120 6 -6.63 -0.1171 MIMAT0000652 mmu-miR-25 66568 Rwdd3 agucuggcucuguucACGUUAc |||||| auuuguuuagaacucUGCAAUu 2 8 154 175 [mm9:3:120858802-120858823:-] 0.5895 120 6 -6.54 -0.1148 MIMAT0000654 mmu-miR-32 66568 Rwdd3 acguUGAAUCAUUACACGUUAu ::|||| | | |||||| auuuGUUUAGAACUCUGCAAUu 2 19 154 175 [mm9:3:120858802-120858823:-] 0.5895 134 6 -8.91 -0.1114 MIMAT0000661 mmu-miR-214 66568 Rwdd3 ugaCGGAC--AGAC--ACGGACGACa ||||| |:|| | ||||||| acaGCCUGGUUUUGAUUUCCUGCUGc 2 20 27 52 [mm9:3:120859054-120859079:-] 0.5341 157 7 -24.02 -0.5429 MIMAT0000708 mmu-miR-363 66568 Rwdd3 augucuACCUAUGGCACGUUAa | || ||: |||||| uuuguuUAGA-ACUCUGCAAUu 2 17 155 175 [mm9:3:120858802-120858822:-] 0.5895 122 6 -9.12 -0.1137 MIMAT0004745 mmu-miR-384-5p 66568 Rwdd3 uguAACGGAUC-C--UU-AACAAAUgu || : ||| | || ||||||| uguUUUUAUAGAGACAAUUUGUUUAga 3 21 138 164 [mm9:3:120858813-120858839:-] 0.6012 129 0 -8.10 -0.1058 MIMAT0001091 mmu-miR-410 66568 Rwdd3 uguccGGUAGACACAAU-AUAa |:||: ||||| ||| uauuaCUAUUGUUGUUAUUAUu 2 17 21 42 [mm9:3:120873968-120873989:-] 0.5006 120 0 -8.34 -1.1333 MIMAT0003169 mmu-miR-539 66568 Rwdd3 ugugUGGUUCCUAUUAAAGAGg |::|| ||:||||||: cguaAUUAA--AUGAUUUCUUa 2 19 192 211 [mm9:3:120858766-120858785:-] 0.5895 139 0 -8.77 -0.1101 MIMAT0003169 mmu-miR-539 66568 Rwdd3 ugUGUGGUUCCUAUU-AAAGAGg |: :: ||| ||| |||||| caAUUUUCAGGCUAAUUUUCUCg 2 21 171 193 [mm9:3:120858784-120858806:-] 0.5895 128 6 -10.65 -1.2623 MIMAT0003169 mmu-miR-539 66568 Rwdd3 ugUGUGGUU--CCUAUUAAAGAGg | | ||| || |||||||| agAGAGCAAUCUGA-AAUUUCUCu 2 21 84 106 [mm9:3:120859000-120859022:-] 0.6264 149 7 -10.99 -1.1116 MIMAT0003169 mmu-miR-539 66568 Rwdd3 ugUGUGGUUCCUAUU-AAAGAGg |: :: ||| ||| |||||| caAUUUUCAGGCUAAUUUUCUCg 2 21 300 322 [mm9:3:120858784-120858806:-] 0.5895 128 6 -10.65 -1.2429 MIMAT0003181 mmu-miR-367 66568 Rwdd3 agugguaacgauuucACGUUAa |||||| auuuguuuagaacucUGCAAUu 2 8 154 175 [mm9:3:120858802-120858823:-] 0.5895 120 6 -7.43 -0.1159 MIMAT0003727 mmu-miR-374 66568 Rwdd3 gugAAUCGU-CCAAC-AUAAUAua ||| :| |||| |||||| cuaUUACUAUUGUUGUUAUUAUua 3 20 20 43 [mm9:3:120873967-120873990:-] 0.5006 137 0 -7.35 -0.2502 MIMAT0003893 mmu-miR-761 66568 Rwdd3 acacaGUCAAAGU---GGGACGACg ::||||:: :||||||| cagccUGGUUUUGAUUUCCUGCUGc 2 18 28 52 [mm9:3:120859054-120859078:-] 0.5341 148 7 -20.11 -0.5429 MIMAT0004895 mmu-miR-590-5p 66568 Rwdd3 gacGUGAAAAUACUUAUUCGAg :| || | | || ||||| uauUAAUUGUUUUAAAAAGCUa 2 20 39 60 [mm9:3:120873950-120873971:-] 0.5006 127 0 -4.44 -0.1028 MIMAT0004896 mmu-miR-590-3p 66568 Rwdd3 ugAUCGAAUAUGU--AUUUUAAu |: :||| | | ||||||| auUGUUUUAAAAAGCUAAAAUUu 2 20 44 66 [mm9:3:120873944-120873966:-] 0.5006 150 7 -3.71 -0.7547 MIMAT0004899 mmu-miR-92b 66568 Rwdd3 ccuccggcccugcucACGUUAu |||||| auuuguuuagaacucUGCAAUu 2 8 154 175 [mm9:3:120858802-120858823:-] 0.5895 120 6 -6.63 -0.1171

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G062326 G066616 Rwdd3 Mus musculus 66568

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rwdd3 mmu-miR-881 beg:511 end:526 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& |||| |||||||| &5' ------CAGA----ACACAGTT 3' Rwdd3 mmu-miR-139-5p beg:653 end:672 pic:3' GACCTCTGTGCACG-TGACATCT 5'& ||| ||||||| &5' ------ACAAACCAAACTGTAG- 3' Rwdd3 mmu-miR-741 beg:681 end:701 pic:3' AGATGTATCTTACCGTAGAGAGT 5'& ||| .|| |||||||| &5' ----CATT--GTGAAATCTCTCA 3' Rwdd3 mmu-miR-7astar beg:340 end:353 pic:3' ATACCGTCTGACACTAAACAAC 5'& |||||||||| &5' -----------GTGATTTGTT- 3' Rwdd3 mmu-miR-3470a beg:609 end:629 pic:3' GGTCGGAC-CAGA-TGTTTCACT 5'& || ||| ||||||||| &5' ------TGTGTCCAACAAAGTGA 3' Rwdd3 mmu-miR-759 beg:405 end:416 pic:3' CAGTTTTAACAAACGTGAGACG 5'& |||||||| &5' --------------CACTCTGC 3' Rwdd3 mmu-miR-686 beg:99 end:114 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||| ||||||| &5' ---------TCTCTGAAGCAA- 3' Rwdd3 mmu-miR-127 beg:5 end:19 pic:3' TCGGTTCGAGTCTG-CCTAGGCT 5'& ||| ||||||| &5' -----------GACAGGATCCG- 3' Rwdd3 mmu-miR-1894-5p beg:728 end:739 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||||||| &5' -------------AGGGGAGA- 3' Rwdd3 mmu-miR-382star beg:0 end:10 pic:3' TTTTTCACAACAGGCACTTACT 5'& |||||||| &5' --------------GTGAATGA 3' Rwdd3 mmu-miR-1186b beg:374 end:395 pic:3' CACCACGT---ACGGAAATTAGGGT 5'& ||. ||||||||||| &5' ----TGTTTTTTGCCTTTAATC--- 3' Rwdd3 mmu-miR-124 beg:382 end:402 pic:3' CCGTAAGTGGCGCACGGAAT 5'& || ||.| |||||||| &5' -GCCTTTAAT-CGTGCCTT- 3' Rwdd3 mmu-miR-130bstar beg:223 end:242 pic:3' TCATCACGTTGTC-CCTTTCTCA 5'& ||. .| |||.|||| &5' -----TGTCT-GGAGGAGAGAG- 3' Rwdd3 mmu-miR-138star beg:59 end:81 pic:3' GGGACCACAAC-ACTTCATCGGC 5'& ||| ||||||||.| &5' ---TGGGCTCATTGAAGTAGTC- 3' Rwdd3 mmu-miR-145 beg:525 end:544 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||.|| |||.|.||||| &5' -----TTTCT-GGAGAGCTGGA- 3' Rwdd3 mmu-miR-145star beg:122 end:134 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||.|||||| &5' ------------TTTCAGGAA- 3' Rwdd3 mmu-miR-146bstar beg:42 end:60 pic:3' TGGTCTTGACTCAGGGATCCCG 5'& || .||| ||.|.||| &5' -CCT--GCTG---CCTTGGGG- 3' Rwdd3 mmu-miR-181a beg:427 end:440 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& ||||.||||| &5' -------------GTTGGATGTT 3' Rwdd3 mmu-miR-182 beg:182 end:202 pic:3' GCCACACTCAAGATGGT-AACGGTTT 5'& ||||| |. ||||||.| &5' ---------TTCTAACGTTTGCCAGA 3' Rwdd3 mmu-miR-1903 beg:122 end:144 pic:3' ACAGAGTCCTTCTTCTTC-TTCC 5'& |.|||||||||| ||| .|| &5' --TTTCAGGAAGAA-AAGCGAG- 3' Rwdd3 mmu-miR-1903 beg:223 end:244 pic:3' ACAGAGTCCTTCTTCTTCTTCC 5'& ||||| |||.||. |||| &5' TGTCT--GGAGGAGAGAGAA-- 3' Rwdd3 mmu-miR-1935 beg:398 end:418 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| || ||||||.| &5' -----TCCTCCCCACTCTGCTT 3' Rwdd3 mmu-miR-1953 beg:354 end:371 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || ||||||.|| &5' --------TGTTTACTTTCTCA 3' Rwdd3 mmu-miR-1968 beg:507 end:528 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& ||.. || ||||.||| &5' -GTTTTACAGAAC--ACAGTTGC- 3' Rwdd3 mmu-miR-19a beg:464 end:479 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |||. |||||.| &5' -------TGCGG----TTGCATA 3' Rwdd3 mmu-miR-207 beg:219 end:238 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& ||| |.| ||||.|| &5' ------GGATTGTCTGGAGGAG- 3' Rwdd3 mmu-miR-20bstar beg:659 end:672 pic:3' GATCTTCACGAGTGTGACGTCA 5'& || ||||.|| &5' -----------CAAACTGTAG- 3' Rwdd3 mmu-miR-214 beg:32 end:51 pic:3' TGACGGACAGACAC----GGACGACA 5'& ||.| || ||||||| &5' -------GTTT-TGATTTCCTGCTG- 3' Rwdd3 mmu-miR-2145 beg:399 end:417 pic:3' TTGGTCCGGGCTGGGACGA 5'& || ||| ||.||||| &5' --CCT--CCCCACTCTGCT 3' Rwdd3 mmu-miR-218-1star beg:340 end:362 pic:3' CCAC-GAACTGCCTTGGTACAAA 5'& ||| .||| .||||||| &5' -GTGATTTGTTT---TCATGTTT 3' Rwdd3 mmu-miR-218-1star beg:354 end:376 pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||.|| || .||||||| &5' --TGTTT-ACTTTCTCATGTTT 3' Rwdd3 mmu-miR-21star beg:248 end:271 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& ||||. | ||||.|||| &5' -ACAGTAAAGGAACTGTTGTT- 3' Rwdd3 mmu-miR-22star beg:532 end:549 pic:3' ATTTCGAACGGTGACTTCTTGA 5'& |.|||| ||||||. &5' -AGAGCTG------GAAGAAT- 3' Rwdd3 mmu-miR-23a beg:564 end:582 pic:3' CCTTTAGGGACCGTTACACTA 5'& |||||.| |||||| &5' -GAAATTCAT----ATGTGA- 3' Rwdd3 mmu-miR-291b-5p beg:27 end:44 pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& |||| .||||||. &5' -------GCCTGG-TTTTGATT 3' Rwdd3 mmu-miR-300 beg:464 end:479 pic:3' CTTCTCTCGAACGGGAACGTAT 5'& ||| ||||||| &5' ----------TGCGGTTGCATA 3' Rwdd3 mmu-miR-30astar beg:520 end:546 pic:3' CGACGTTTGTAGGC----TGACTTTC 5'& |.||| ||.| .|||.||| &5' GTTGCTT---TCTGGAGAGCTGGAAG 3' Rwdd3 mmu-miR-30b beg:341 end:364 pic:3' TCGACTCACATCC-TACAAATGT 5'& ||. ||| |||||||| &5' AGTGATTTGTTTTCATGTTTAC- 3' Rwdd3 mmu-miR-30estar beg:520 end:546 pic:3' CGACATTTGT-AGGC----TGACTTTC 5'& || .| ||.| .|||.||| &5' ---GTT-GCTTTCTGGAGAGCTGGAAG 3' Rwdd3 mmu-miR-322star beg:340 end:362 pic:3' CAC--AACGTCGCGAAGTACAAA 5'& ||| |||. .||||||||| &5' GTGATTTGT----TTTCATGTTT 3' Rwdd3 mmu-miR-337-3p beg:523 end:544 pic:3' TCCGT-AGTATATC-CTCGACTT 5'& || || |.| ||||||.| &5' --GCTTTC---TGGAGAGCTGGA 3' Rwdd3 mmu-miR-340-5p beg:139 end:157 pic:3' TTAGTCAGAGTAACGAAATATT 5'& |||| | ||.|||||.. &5' ----AGTC-C--TGTTTTATGG 3' Rwdd3 mmu-miR-343 beg:719 end:739 pic:3' AGACCCGTGTACTTCCCTCT 5'& || | || |.|||||| &5' -CTATGTCCA--AGGGGAGA 3' Rwdd3 mmu-miR-411star beg:460 end:479 pic:3' CCAATCACCTGGCACAATGTAT 5'& ||.||| || |||.|||| &5' --TTGGTG---CG-GTTGCATA 3' Rwdd3 mmu-miR-421 beg:420 end:442 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |... || |||||| &5' --GTTTTAAGT-TGGATGTTGA- 3' Rwdd3 mmu-miR-434-3p beg:550 end:565 pic:3' TCCTCAGCTCACTACCAAGTTT 5'& ||||| ||||||| &5' --------AGTGA--GTTCAAA 3' Rwdd3 mmu-miR-470 beg:713 end:733 pic:3' TGAGTGGTCACGGT-CAGGTTCTT 5'& .||.| |.| |||||||. &5' ---TACTAA--CTATGTCCAAGG- 3' Rwdd3 mmu-miR-471 beg:705 end:728 pic:3' CAC-TTTT-CGTGATATGATGCAT 5'& | |||| |.|||| ||||.|| &5' --GTAAAATGTACTA-ACTATGT- 3' Rwdd3 mmu-miR-491 beg:390 end:412 pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& ||.|| |||||||| &5' --TCGTGCCTTCC-TCCCCACT 3' Rwdd3 mmu-miR-539 beg:86 end:107 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|| || ||||||||. &5' --GCAATCT-GA-AATTTCTCT 3' Rwdd3 mmu-miR-542-3p beg:678 end:701 pic:3' AAAGTCAATAG-TTAGACAGTGT 5'& ||||| ||.| ||||| ||| &5' TTTCA-TTGTGAAATCTCTCA-- 3' Rwdd3 mmu-miR-691 beg:113 end:134 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || .||| .|||||||| &5' ---TCATTCTCATTTCAGGAA- 3' Rwdd3 mmu-miR-692 beg:229 end:243 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||| |.||||| &5' ----GAGG-----AGAGAGA- 3' Rwdd3 mmu-miR-693-3p beg:519 end:542 pic:3' AATGTCGGTGT-AGA-CTTTCGACG 5'& ||||. | ||| ||.||||| &5' --ACAGTTGCTTTCTGGAGAGCTG- 3' Rwdd3 mmu-miR-761 beg:31 end:53 pic:3' ACACAGTCAAAGT---GGGACGACG 5'& .||||. .|||||||| &5' ------GGTTTTGATTTCCTGCTGC 3' Rwdd3 mmu-miR-764-3p beg:517 end:541 pic:3' TGTCAACGGT-GATA-C-CGGAGGA 5'& ||||||||. ||. | ||. &5' ACAGTTGCTTTCTGGAGAGCT---- 3' Rwdd3 mmu-miR-875-3p beg:292 end:311 pic:3' GTATCGGAGTCA-TAAAAGTCC 5'& ||| ||||||||| &5' ------CTCTGCAATTTTCAGG 3' Rwdd3 mmu-miR-876-5p beg:679 end:697 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& ||||. | ||||||. &5' ------TTCATTGTGAAATCT- 3' Rwdd3 mmu-miR-876-5p beg:431 end:452 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& ||| ||| |||||.| &5' ----GATGTTGAGAAAAATCTA 3' Rwdd3 mmu-miR-879star beg:69 end:86 pic:3' GGCTTTCGAACTTCGGTATTCG 5'& .|||. ||.|||||| &5' ---GAAGT----AGTCATAAG- 3' Rwdd3 mmu-miR-881 beg:536 end:556 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||. |||| ||||||| &5' -CTGGA-AGAAT--ACACAGT- 3' Rwdd3 mmu-miR-92astar beg:392 end:412 pic:3' CATTACGGT-GGTTAGGGGTGGA 5'& .|||| || |||||||. &5' ---GTGCCTTCC--TCCCCACT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rwdd3 RAID00009231 mmu-miR-127-3p miRNA MIMAT0000139 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00113222 mmu-miR-590-5p miRNA MIMAT0004895 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00131919 mmu-miR-7076-5p miRNA MIMAT0028058 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00169365 mmu-miR-205-5p miRNA MIMAT0000238 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00177732 mmu-miR-539-5p miRNA MIMAT0003169 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00229365 mmu-miR-92a-3p miRNA MIMAT0000539 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00353301 mmu-miR-590-3p miRNA MIMAT0004896 Rwdd3 mRNA 66568 Prediction 0.2202 Rwdd3 RAID00665536 mmu-miR-30b-5p miRNA MIMAT0000130 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00723999 mmu-miR-7075-5p miRNA MIMAT0028056 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00842001 mmu-miR-5623-3p miRNA MIMAT0022374 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID00989782 mmu-miR-92b-3p miRNA MIMAT0004899 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01081065 mmu-miR-3069-3p miRNA MIMAT0014845 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01082767 mmu-miR-7054-3p miRNA MIMAT0028013 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01103949 mmu-miR-466l-3p miRNA MIMAT0005830 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01109657 mmu-miR-363-3p miRNA MIMAT0000708 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01258669 mmu-miR-384-5p miRNA MIMAT0004745 Rwdd3 mRNA 66568 Prediction 0.2202 Rwdd3 RAID01326116 mmu-miR-322-3p miRNA MIMAT0000549 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01538583 mmu-miR-182-5p miRNA MIMAT0000211 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01556890 mmu-miR-7119-3p miRNA MIMAT0028136 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01576422 mmu-miR-30a-5p miRNA MIMAT0000128 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01612316 mmu-miR-30d-5p miRNA MIMAT0000515 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01625690 mmu-miR-7030-5p miRNA MIMAT0027964 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01629508 mmu-miR-761 miRNA MIMAT0003893 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01761579 mmu-miR-1971 miRNA MIMAT0009446 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01769383 mmu-miR-410-3p miRNA MIMAT0001091 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01886163 mmu-miR-25-3p miRNA MIMAT0000652 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID01976867 mmu-miR-7022-5p miRNA MIMAT0027948 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02059733 mmu-miR-1981-5p miRNA MIMAT0009458 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02180461 mmu-miR-6920-5p miRNA MIMAT0027740 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02196246 mmu-miR-142b miRNA MIMAT0031402 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02346804 mmu-miR-7651-3p miRNA MIMAT0029805 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02407719 mmu-miR-30e-5p miRNA MIMAT0000248 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02444608 mmu-miR-6986-3p miRNA MIMAT0027875 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02505935 mmu-miR-6919-3p miRNA MIMAT0027739 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02615222 mmu-miR-6951-3p miRNA MIMAT0027803 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID02998735 mmu-miR-367-3p miRNA MIMAT0003181 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03131549 mmu-miR-129-5p miRNA MIMAT0000209 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03245253 mmu-miR-7116-3p miRNA MIMAT0028130 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03302799 mmu-miR-203-3p miRNA MIMAT0000236 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03434611 mmu-miR-191-5p miRNA MIMAT0000221 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03456190 mmu-miR-153-3p miRNA MIMAT0000163 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03628230 mmu-miR-214-3p miRNA MIMAT0000661 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03639899 mmu-miR-7a-1-3p miRNA MIMAT0004670 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03906463 mmu-miR-30c-5p miRNA MIMAT0000514 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03916198 mmu-miR-374b-5p miRNA MIMAT0003727 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03929074 mmu-miR-32-5p miRNA MIMAT0000654 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID03966094 mmu-miR-21a-5p miRNA MIMAT0000530 Rwdd3 mRNA 66568 Prediction 0.1828 Rwdd3 RAID04023991 mmu-miR-7233-3p miRNA MIMAT0028435 Rwdd3 mRNA 66568 Prediction 0.1828