DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 67123 Ubap1 aucucgucguuuauuACUAAGc |||||| auuugcuaacuauuuUGAUUCu 2 8 892 913 [mm9:4:41336746-41336767:+] 0.8002 120 6 -6.32 -0.1683 MIMAT0004523 mmu-miR-29b* 67123 Ubap1 auUUGGU-GGUAUACUUUGGUCg | |:| |||| |||||||| acACCUAGGCAUA-GAAACCAGu 2 21 789 810 [mm9:4:41336643-41336664:+] 0.6858 157 7 -19.47 -0.7127 MIMAT0000137 mmu-miR-126-5p 67123 Ubap1 gcgcaugguuuUCAUUAUUac | |||||| uucagagaacuACUAAUAAaa 3 11 913 933 [mm9:4:41336767-41336787:+] 0.8002 122 0 -2.79 -0.2313 MIMAT0004533 mmu-miR-141* 67123 Ubap1 agguugugacgugaCCUUCUAc ||||||| gcugggggaaaguaGGAAGAUu 2 9 163 184 [mm9:4:41336017-41336038:+] 0.6477 140 7 -10.82 -0.9643 MIMAT0000161 mmu-miR-151-3p 67123 Ubap1 ggagUUCCUCGG--A-GUCAGAuc ||||| : | |||||| uacaAAGGAUAUAAUACAGUCUug 3 18 857 880 [mm9:4:41336711-41336734:+] 0.7649 123 0 -13.29 -0.4575 MIMAT0004538 mmu-miR-10b* 67123 Ubap1 auaaggggaUCUUAGCUUAGAc || |:|||||| auauaauacAGUCUUGAAUCUa 2 14 865 886 [mm9:4:41336719-41336740:+] 0.7649 133 6 -9.55 -0.5248 MIMAT0000217 mmu-miR-188-5p 67123 Ubap1 gggAGGUGGUACGUUCCCUAc ||:| || ||| |||| agaUCUA-AAUACAAAGGAUa 2 19 848 867 [mm9:4:41336702-41336721:+] 0.7297 124 0 -8.89 -0.1707 MIMAT0004541 mmu-miR-188-3p 67123 Ubap1 acGUUUGGGACGUAC-ACCCUc || :|:|||:|| ||||| ucCACCUCUUGCGUGCUGGGAu 2 20 365 386 [mm9:4:41327322-41327343:+] 0.4989 131 0 -22.07 -0.3087 MIMAT0000230 mmu-miR-199a-3p 67123 Ubap1 auuggUUACACGUC---UGAUGAca | | | ||| |||||| uuuugAUUCUUCAGAGAACUACUaa 3 18 904 928 [mm9:4:41336758-41336782:+] 0.8002 124 0 -8.44 -0.9187 MIMAT0004546 mmu-miR-202-5p 67123 Ubap1 uuUCUUCAUAUACGUAUCCUu ||| || || || |||| aaAGAUCUAAAUACAAAGGAu 2 20 846 866 [mm9:4:41336700-41336720:+] 0.7297 131 0 -8.52 -0.1400 MIMAT0000367 mmu-miR-291a-5p 67123 Ubap1 ucucucccggaGGUGAAACUAc |:|:|||||| uaauuugcuaaCUAUUUUGAUu 2 12 890 911 [mm9:4:41336744-41336765:+] 0.8002 135 6 -10.37 -0.1755 MIMAT0004574 mmu-miR-294* 67123 Ubap1 ucuAUCC--CGG-AGGUAAAACUCa |||| ||: || :||||||| ugcUAGGAAGCUGUCAGUUUUGAGu 2 20 647 671 [mm9:4:41336501-41336525:+] 0.6048 157 7 -16.93 -0.4620 MIMAT0004574 mmu-miR-294* 67123 Ubap1 ucuaucccGGAGGUAAAACUCa ||| ::||||||| uaaacauaCCUGUGUUUUGAGa 2 15 220 241 [mm9:4:41336074-41336095:+] 0.6467 154 7 -14.78 -0.6856 MIMAT0004574 mmu-miR-294* 67123 Ubap1 ucUAUCCCGGAGGUAAAACUca || | : |:||||||| uaAUUUGCUAACUAUUUUGAuu 3 21 890 911 [mm9:4:41336744-41336765:+] 0.8002 132 0 -8.32 -0.1447 MIMAT0000375 mmu-miR-297a 67123 Ubap1 ugUACGUG-UAC-GU-GUGU-AUGUa | |||| || || |||| |||| ccAGGCACUCUGCCACCACACUACAu 2 21 137 162 [mm9:4:41327094-41327119:+] 0.4996 121 0 -17.00 -0.1489 MIMAT0000376 mmu-miR-298 67123 Ubap1 cccuUCUUGUCGGGAGGAGACGg ||| || : |||||||| gcuuAGACCA-UAAUCCUCUGCu 2 20 603 624 [mm9:4:41336457-41336478:+] 0.6048 153 7 -19.65 -0.5389 MIMAT0004578 mmu-miR-300* 67123 Ubap1 uguUUCCUAUUGGAGAGAAGUu || || : :|||||| gcuAACUAUUUUGAUUCUUCAg 2 20 896 917 [mm9:4:41336750-41336771:+] 0.8002 127 6 -11.31 -0.2069 MIMAT0004580 mmu-miR-34c* 67123 Ubap1 ggaccgacacaccAAUCACUAa |||||||| cuucccacaagccUUAGUGAUu 2 10 12 33 [mm9:4:41326969-41326990:+] 0.4944 145 7 -10.03 -0.7726 MIMAT0004581 mmu-miR-34b-3p 67123 Ubap1 cuaccgucaccucAAUCACUAa |||||||| cuucccacaagccUUAGUGAUu 2 10 12 33 [mm9:4:41326969-41326990:+] 0.4944 145 7 -8.94 -0.7689 MIMAT0004617 mmu-miR-148a* 67123 Ubap1 ucAGCCUCA-CAGAGUCUUGAaa |: || | || |||||| auUUUGAUUCUUCAGAGAACUac 3 21 903 925 [mm9:4:41336757-41336779:+] 0.8002 127 0 -7.17 -0.3001 MIMAT0004624 mmu-miR-15a* 67123 Ubap1 acUCCGUCGUGUCAUACCGGAc |||: : | |||||||| caAGGUCUUCCUAUAUGGCCUa 2 21 332 353 [mm9:4:41327289-41327310:+] 0.4983 152 7 -15.79 -0.6828 MIMAT0004626 mmu-miR-18a* 67123 Ubap1 gucuuccucguGAAUCCCGUCa || ||||||| ugcuucuuuucCUGAGGGCAGc 2 12 74 95 [mm9:4:41327031-41327052:+] 0.5001 147 7 -15.07 -0.3662 MIMAT0004628 mmu-miR-21* 67123 Ubap1 cugUCGGGUAGCUGACGACAAc ||| | | :|||||||| aggAGCAGA-CUGCUGCUGUUu 2 20 351 371 [mm9:4:41336205-41336225:+] 0.5909 153 7 -17.98 -0.1487 MIMAT0000558 mmu-miR-325* 67123 Ubap1 uguGAAUGACUCGUGGAUGAUcc ||| | ||| | |||||| auuCUU-CAGAG-AACUACUAau 3 21 909 929 [mm9:4:41336763-41336783:+] 0.8002 136 0 -11.95 -0.7560 MIMAT0000593 mmu-miR-344 67123 Ubap1 ugUCAGUCCGA-A-ACC-GAUCUAGu :||| || | ||| ||||||| aaGGUCUUCCUAUAUGGCCUAGAUCu 2 22 333 358 [mm9:4:41327290-41327315:+] 0.4983 150 7 -17.23 -0.1018 MIMAT0000593 mmu-miR-344 67123 Ubap1 ugucagucCGAAA--CCGAUCUAGu |:||| ||||||||| cugcugcuGUUUUGGGGCUAGAUCc 2 16 360 384 [mm9:4:41336214-41336238:+] 0.5909 158 7 -17.72 -0.1751 MIMAT0000672 mmu-miR-199b* 67123 Ubap1 cuUGUC--CAUCAGAUUUGUGACCc |||| |||| | ||||||| cgACAGCCCUAGUGU-UACACUGGu 2 22 474 497 [mm9:4:41336328-41336351:+] 0.6225 154 7 -19.13 -0.2784 MIMAT0004667 mmu-miR-199b 67123 Ubap1 auuggUUACACGUC---UGAUGAca | | | ||| |||||| uuuugAUUCUUCAGAGAACUACUaa 3 18 904 928 [mm9:4:41336758-41336782:+] 0.8002 124 0 -8.44 -0.9187 MIMAT0000706 mmu-miR-362-5p 67123 Ubap1 uaagUGUGGAUCCAAGGUUCCUAa | |:||| | | |||||| uuaaAGAUCUAAAUACAAAGGAUa 2 21 844 867 [mm9:4:41336698-41336721:+] 0.7297 132 6 -10.67 -0.4715 MIMAT0003387 mmu-miR-376a* 67123 Ubap1 ugaguaucuuccucUUAGAUGg ||||||: gaaaucuguuauuaAAUCUAUa 2 9 572 593 [mm9:4:41327529-41327550:+] 0.5015 124 0 -5.41 -0.1869 MIMAT0003387 mmu-miR-376a* 67123 Ubap1 ugAGUAUCUU-CCUCUUAGAUgg | ||| |: ||||||| uaUAAUACAGUCUUGAAUCUAaa 3 21 866 888 [mm9:4:41336720-41336742:+] 0.7649 127 0 -7.91 -0.2483 MIMAT0003387 mmu-miR-376a* 67123 Ubap1 ugaguaucUUCCUCUUAGAUgg || | |||||| gaacuacuAAUAAAAAUCUAaa 3 15 919 940 [mm9:4:41336773-41336794:+] 0.8002 126 0 -5.31 -0.3548 MIMAT0004704 mmu-miR-335-3p 67123 Ubap1 ccAGUC-CUCG-UUAUUACUUUUu |||| || | | |||| |||| cuUCAGAGAACUACUAAUAAAAAu 2 21 912 935 [mm9:4:41336766-41336789:+] 0.8002 134 0 -6.45 -0.1300 MIMAT0001090 mmu-miR-409-3p 67123 Ubap1 uccccaaguggcucGUUGUAAg |||:||| uguauuauguucuaCAAUAUUa 2 9 825 846 [mm9:4:41336679-41336700:+] 0.7297 124 0 -6.81 -0.1206 MIMAT0002105 mmu-miR-464 67123 Ubap1 auaGAGUGUCUUAUU--UGAACCAu ||: ||||| :| ||||||| gggCUUUCAGAAGGAAUACUUGGUu 2 21 259 283 [mm9:4:41336113-41336137:+] 0.6458 163 7 -19.09 -0.6135 MIMAT0002106 mmu-miR-465a-5p 67123 Ubap1 agUGUAGUCACGGUAAGAUUUAu ||| :| | : ||||||| cuACAAUAUUAAAGAUCUAAAUa 2 22 836 858 [mm9:4:41336690-41336712:+] 0.7297 149 7 -9.52 -1.3212 MIMAT0002106 mmu-miR-465a-5p 67123 Ubap1 agUGUAGUCACGG-UAAGAUUUau |:| |||| :: | |||||| uaAUA-CAGUCUUGAAUCUAAAgu 3 22 868 890 [mm9:4:41336722-41336744:+] 0.7649 134 0 -8.75 -0.2738 MIMAT0002106 mmu-miR-465a-5p 67123 Ubap1 aguGUAGUCACGGUAAGAUUUau :| :| | | |||||| aacUACUAAUAAAAAUCUAAAag 3 21 920 942 [mm9:4:41336774-41336796:+] 0.8002 124 0 -5.80 -0.3476 MIMAT0004760 mmu-miR-470* 67123 Ubap1 agaAGAGUCUUUC-CAUG-ACCAa |:||||||:| ||| |||| ggcUUUCAGAAGGAAUACUUGGUu 2 20 260 283 [mm9:4:41336114-41336137:+] 0.6458 134 0 -20.52 -0.4823 MIMAT0003166 mmu-miR-546 67123 Ubap1 cuGAGGCACGGUGGUa | |: |||||||| ggCACUCUGCCACCAc 2 15 140 155 [mm9:4:41327097-41327112:+] 0.4996 150 7 -17.23 -0.1156 MIMAT0003171 mmu-miR-542-5p 67123 Ubap1 agcacuguacuacuAGGGGCUc ||||||| uccugggcccgccuUCCCCGAc 2 9 456 477 [mm9:4:41336310-41336331:+] 0.5909 140 7 -16.80 -0.1404 MIMAT0003186 mmu-miR-369-3p 67123 Ubap1 uuUCUAGUUG-GUACAU-AAUAa ||: ||:| ::|||| |||| ugAGGGCAGCUUGUGUAUUUAUu 2 20 86 108 [mm9:4:41327043-41327065:+] 0.5001 126 0 -11.45 -0.5581 MIMAT0003186 mmu-miR-369-3p 67123 Ubap1 uuuCUAGUUGGUACAUAAUAa |:|: ::: |||||||| uuuGGUUUGUU-UGUAUUAUg 2 19 814 833 [mm9:4:41336668-41336687:+] 0.7077 148 7 -7.48 -1.0681 MIMAT0004788 mmu-miR-20b* 67123 Ubap1 gaucuucACGA-GU-GUGAC-GUCa |||| || ||||| ||| uccucucUGCUGCACCACUGUCAGa 2 16 392 416 [mm9:4:41336246-41336270:+] 0.5909 121 0 -16.02 -0.3665 MIMAT0004790 mmu-miR-503* 67123 Ubap1 gguccgucaccuuUGUUAUGAg ||||||:| uguauuauguucuACAAUAUUa 2 10 825 846 [mm9:4:41336679-41336700:+] 0.7297 129 0 -8.34 -0.1567 MIMAT0003189 mmu-miR-291b-5p 67123 Ubap1 ccucucccggaGGUGAAACUAg |:|:|||||| uaauuugcuaaCUAUUUUGAUu 2 12 890 911 [mm9:4:41336744-41336765:+] 0.8002 135 6 -12.28 -0.1755 MIMAT0003190 mmu-miR-291b-3p 67123 Ubap1 uguuUGUUUUACCUACGUGAAa ||||| ||||||||| cgguACAAA---GAUGCACUUu 2 19 513 531 [mm9:4:41336367-41336385:+] 0.6540 158 7 -16.22 -0.8014 MIMAT0003373 mmu-miR-302b* 67123 Ubap1 ucuUUCGUAAGGGUACAAUUUCa | |: | | || |||||| auuAUGUUCUACAAUAUUAAAGa 2 21 828 850 [mm9:4:41336682-41336704:+] 0.7297 124 6 -6.98 -0.4851 MIMAT0003375 mmu-miR-302c* 67123 Ubap1 cgUCCAUUGGGGUACAAUUUCg | || : | || |||||| uuAUGUUCUACAAUAUUAAAGa 2 21 829 850 [mm9:4:41336683-41336704:+] 0.7297 124 6 -5.66 -0.4919 MIMAT0003728 mmu-miR-374* 67123 Ubap1 gagccuGUUACUA---UUAUGUUgg :|| ||| ||||||| caauauUAAAGAUCUAAAUACAAag 3 17 839 863 [mm9:4:41336693-41336717:+] 0.7297 131 0 -5.84 -0.2217 MIMAT0003732 mmu-miR-668 67123 Ubap1 ccAUCACCCGGCU--CGGCUC-ACUGu ||| ||:||: |: ||| |||| guUAGAAGGUCGGAUGUGGAGUUGACa 2 23 107 133 [mm9:4:41335961-41335987:+] 0.6028 125 0 -23.62 -0.6971 MIMAT0003892 mmu-miR-762 67123 Ubap1 cgagacagGGCCGGGGUCGGGg || |:||||||| uugaacagCCUCCUCCAGCCCu 2 15 744 765 [mm9:4:41336598-41336619:+] 0.6453 150 7 -22.76 -0.6855 MIMAT0015219 mmu-miR-3475 67123 Ubap1 aaGUUUGGUACACGGAGGUCu ::||| : | ||||||| cuUGAACAGCCU-CCUCCAGc 2 20 743 762 [mm9:4:41336597-41336616:+] 0.6453 145 7 -16.68 -0.3869 MIMAT0014815 mmu-miR-3099* 67123 Ubap1 guucccgACCUUCCUUCGACc || ||||||||| gccccugUGCUAGGAAGCUGu 2 15 640 660 [mm9:4:41336494-41336514:+] 0.6048 154 7 -18.12 -0.2570 MIMAT0003477 mmu-miR-669a 67123 Ubap1 ugUACUUGUACGUGUGUGUUGa || || | || ||||||| auAU-AAGAGACA-ACACAACu 2 21 224 243 [mm9:4:41327181-41327200:+] 0.5074 148 7 -12.99 -0.7294 MIMAT0003455 mmu-miR-679 67123 Ubap1 ugGUUCUCAGUGGAGUGUCAGg ||| :| :|: :|||||| uaCAAAGGAUAUAAUACAGUCu 2 21 857 878 [mm9:4:41336711-41336732:+] 0.7297 140 6 -16.87 -0.2467 MIMAT0003455 mmu-miR-679 67123 Ubap1 uggUUCUCAGUGGAGUGUC-AGg |:||| | |: ||||| || ccaAGGAGGCUCUGCACAGCUCa 2 20 42 64 [mm9:4:41335896-41335918:+] 0.5857 127 0 -20.97 -0.1828 MIMAT0003466 mmu-miR-687 67123 Ubap1 aguaacgacguaaggUCCUAUc |||||| aagaucuaaauacaaAGGAUAu 2 8 847 868 [mm9:4:41336701-41336722:+] 0.7297 120 6 -6.84 -0.3595 MIMAT0003470 mmu-miR-691 67123 Ubap1 aaAAGACGGAGAGAAGUC-CUUa ||:|| :||||||| ||| uaUUUUG--AUUCUUCAGAGAAc 2 21 902 922 [mm9:4:41336756-41336776:+] 0.8002 125 0 -16.41 -1.2915 MIMAT0003472 mmu-miR-693-5p 67123 Ubap1 cuUUUGAAAG-CCUACACCGAc ||| || |||||||| uuAAAGAAUCACAAUGUGGCUc 2 20 504 525 [mm9:4:41327461-41327482:+] 0.4989 146 7 -12.35 -0.5657 MIMAT0004826 mmu-miR-146b* 67123 Ubap1 ugGUCUUGACUCA--G-GGAUCCcg || || ||| | | |||||| gaCACAA-UGAAUAACACCUAGGca 3 21 776 799 [mm9:4:41336630-41336653:+] 0.6858 128 0 -13.31 -0.1359 MIMAT0003496 mmu-miR-706 67123 Ubap1 aaaaAAC-UCUGUC-CCAAAGAGa ||| |||::| ||||||| agacUUGCAGAUGGAUGUUUCUCc 2 19 446 469 [mm9:4:41327403-41327426:+] 0.4989 156 7 -14.62 -0.5895 MIMAT0003499 mmu-miR-709 67123 Ubap1 aggaGGA-C-GGA-GACGGAGg ||| | :|| ||||||| auggCCUAGAUCUCCUGCCUCc 2 16 346 367 [mm9:4:41327303-41327324:+] 0.4983 144 7 -24.34 -0.2558 MIMAT0003499 mmu-miR-709 67123 Ubap1 aggaggacggAGACGGAGg |||||||| uggggcaaagUCUGCCUCu 2 10 538 556 [mm9:4:41336392-41336410:+] 0.6643 145 7 -16.79 -0.1764 MIMAT0003500 mmu-miR-710 67123 Ubap1 gaGUUGAGAG-GGGUUCUGAACc | |:|:|| ::| ||||||| acCCAUUUUCUUUCUAGACUUGc 2 21 431 453 [mm9:4:41327388-41327410:+] 0.4989 159 7 -19.12 -0.5594 MIMAT0003500 mmu-miR-710 67123 Ubap1 gaguugagagggguUCUGAACc ||||||| ----------cagcAGACUUGc 2 9 1 12 [mm9:4:41326958-41326969:+] 0.4920 140 7 -8.60 -0.4474 MIMAT0003504 mmu-miR-713 67123 Ubap1 cgACACACGGAAGUCACGu | ||| :||||||||| uuUUUGU-UCUUCAGUGCu 2 18 108 125 [mm9:4:41327065-41327082:+] 0.4996 159 7 -17.92 -0.5823 MIMAT0003508 mmu-miR-501-5p 67123 Ubap1 aaagUGGGUCCCUGUUUCCUAa |:|:| ||||||||| aaagAUCUAAAUACAAAGGAUa 2 19 846 867 [mm9:4:41336700-41336721:+] 0.7297 158 7 -14.87 -1.2938 MIMAT0004237 mmu-miR-742 67123 Ubap1 aaauggguCGUACC----ACCGAAAg ||:||| ||||||| uugauaguGCGUGGAGAAUGGCUUUg 2 15 32 57 [mm9:4:41326989-41327014:+] 0.4975 145 7 -16.77 -0.6461 MIMAT0004845 mmu-miR-881* 67123 Ubap1 ucuacACUG--ACAAUAG-AGAGAc ||:| ||| :|| ||||| gugccUGGCUAUGUAGUCGUCUCUg 2 18 404 428 [mm9:4:41327361-41327385:+] 0.4989 120 0 -16.60 -0.7596 MIMAT0004848 mmu-miR-883a-5p 67123 Ubap1 cauuGACGAUGAAGAGAGUCGu || ||| | :||||||| ggguCU-CUAAUGUUCUCAGCc 2 19 291 311 [mm9:4:41336145-41336165:+] 0.5909 156 7 -16.66 -0.5056 MIMAT0004857 mmu-miR-147 67123 Ubap1 aucGUCUUC-GUAAAGG-CGUGUg || :| | ||||| ||||| uauCAUUGGCCCUUUCCAGCACAu 2 20 671 694 [mm9:4:41336525-41336548:+] 0.6048 122 0 -17.49 -0.2119 MIMAT0004871 mmu-miR-465b-5p 67123 Ubap1 gucUAGUCGUGGUAAGAUUUAu | :| :| : ||||||| uacAAUAUUAAAGAUCUAAAUa 2 20 837 858 [mm9:4:41336691-41336712:+] 0.7297 143 7 -9.94 -1.3212 MIMAT0004871 mmu-miR-465b-5p 67123 Ubap1 gucUA-GUC-GUGGUAAGAUUUau || ||| | : | |||||| auaAUACAGUCUUGAAUCUAAAgu 3 20 867 890 [mm9:4:41336721-41336744:+] 0.7649 129 0 -8.00 -0.2786 MIMAT0004871 mmu-miR-465b-5p 67123 Ubap1 gucUAGUCGUGGUAAGAUUUau | :| :| | |||||| acuACUAAUAAAAAUCUAAAag 3 20 921 942 [mm9:4:41336775-41336796:+] 0.8002 127 0 -3.00 -0.3476 MIMAT0004873 mmu-miR-465c-5p 67123 Ubap1 gucuagucgcgguaAGAUUUAu ||||||| uacaauauuaaagaUCUAAAUa 2 9 837 858 [mm9:4:41336691-41336712:+] 0.7297 140 7 -7.69 -1.3221 MIMAT0004873 mmu-miR-465c-5p 67123 Ubap1 gucUA-GUC-GCGGUAAGAUUUau || ||| | : | |||||| auaAUACAGUCUUGAAUCUAAAgu 3 20 867 890 [mm9:4:41336721-41336744:+] 0.7649 129 0 -8.59 -0.2786 MIMAT0004873 mmu-miR-465c-5p 67123 Ubap1 gucuagucgcggUAAGAUUUau | |||||| acuacuaauaaaAAUCUAAAag 3 11 921 942 [mm9:4:41336775-41336796:+] 0.8002 122 0 -2.92 -0.3532 MIMAT0004882 mmu-miR-466f-3p 67123 Ubap1 cacacauacacacACACAUAc ||||||| ccugagggcagcuUGUGUAUu 2 9 84 104 [mm9:4:41327041-41327061:+] 0.5001 140 7 -9.00 -0.3574 MIMAT0004890 mmu-miR-509-5p 67123 Ubap1 uacUAACGGUGU----AAGACCUCAu | ||::||| ||||||||| ccuAGUGUUACACUGGUUCUGGAGUg 2 20 481 506 [mm9:4:41336335-41336360:+] 0.6540 158 7 -22.30 -0.2656 MIMAT0004940 mmu-miR-511 67123 Ubap1 acucacgucucGUUUUCCGUa :||||||:| uaauaaaaaucUAAAAGGUA- 2 11 926 945 [mm9:4:41336780-41336799:+] 0.8002 130 0 -7.49 -0.3010 MIMAT0005291 mmu-miR-582-5p 67123 Ubap1 ucauUG-ACCAA--CUUGUUGACAu || ||||| |:||||||| gaccACAUGGUUCCUAGCAACUGUu 2 19 546 570 [mm9:4:41327503-41327527:+] 0.4989 156 7 -17.71 -0.6508 MIMAT0005830 mmu-miR-466l 67123 Ubap1 uuauacacacGUACAUAAAUAu ::||||||||| gagggcagcuUGUGUAUUUAUu 2 13 87 108 [mm9:4:41327044-41327065:+] 0.5001 152 7 -9.33 -0.4873 MIMAT0005836 mmu-miR-1186 67123 Ubap1 guacGGAAAUUAAGGUCGUGAg |:| | | | ||||||| acgaCUUGUCACU-CAGCACUa 2 19 712 732 [mm9:4:41336566-41336586:+] 0.6048 148 7 -16.02 -0.8148 MIMAT0005837 mmu-miR-1187 67123 Ubap1 aaUGUGUGUAUGU-GUGUG-UGUAu :||| | || ||||| |||| agGCACUCUGCCACCACACUACAUc 2 22 139 163 [mm9:4:41327096-41327120:+] 0.4996 124 0 -15.44 -0.1109 MIMAT0005838 mmu-miR-669j 67123 Ubap1 acaaacgUACACUC--AUAUACGu || ||:| ||||||| uaggaagAUUUGGGCAUAUAUGCu 2 16 175 198 [mm9:4:41336029-41336052:+] 0.6477 150 7 -9.28 -0.7395 MIMAT0005839 mmu-miR-669f 67123 Ubap1 uauGCACACACACAUACAU-AUAc | | || ||| |||| ||| ucuCUUUGGUUUGUUUGUAUUAUg 2 21 810 833 [mm9:4:41336664-41336687:+] 0.7077 124 0 -10.75 -1.1095 MIMAT0005840 mmu-miR-669i 67123 Ubap1 cauacguACACACAUAUACGu || | ||||||| gaagauuUGGGCAUAUAUGCu 2 15 178 198 [mm9:4:41336032-41336052:+] 0.6477 146 7 -7.55 -0.7395 MIMAT0005857 mmu-miR-1196 67123 Ubap1 uccgucuccguccAUCUAAa |||||| guuauuaaaucuaUAGAUUg 2 8 579 598 [mm9:4:41327536-41327555:+] 0.5015 120 6 -3.37 -0.1628 MIMAT0005858 mmu-miR-1197 67123 Ubap1 ucuucaucuggUACACAGGAu | ||||||| uguguuuugagAAGUGUCCUu 2 11 230 250 [mm9:4:41336084-41336104:+] 0.6458 142 7 -13.26 -0.7013 MIMAT0007872 mmu-miR-1906 67123 Ubap1 ucgggacggaGUCCGACGACGu ||| ||||||| acaggaggagCAGACUGCUGCu 2 13 346 367 [mm9:4:41336200-41336221:+] 0.5909 152 7 -19.35 -0.2846 MIMAT0007872 mmu-miR-1906 67123 Ubap1 ucGGGACGGAGUCCGACGACGu |:|| |||| ||||||| ucCUCU-CCUC--UCUGCUGCa 2 21 387 405 [mm9:4:41336241-41336259:+] 0.5909 151 7 -25.79 -0.5249 MIMAT0007872 mmu-miR-1906 67123 Ubap1 ucgggacggaguccGACGACGu ||||||| uagaccauaauccuCUGCUGCc 2 9 606 627 [mm9:4:41336460-41336481:+] 0.6048 140 7 -16.14 -0.1876 MIMAT0007873 mmu-miR-1896 67123 Ubap1 gaggaguggguGGUAGUCUCUc :| ||||||| acuauuuugauUCUUCAGAGAa 2 12 900 921 [mm9:4:41336754-41336775:+] 0.8002 143 7 -14.47 -1.3048 MIMAT0007876 mmu-miR-1907 67123 Ubap1 uggAG-GUCUAGGAG----ACGACGAg || ::| ||||: ||||||| uaaUCGUGGUUCCUUUUAGUGCUGCUa 2 20 267 293 [mm9:4:41327224-41327250:+] 0.5074 145 7 -17.98 -0.8980 MIMAT0007876 mmu-miR-1907 67123 Ubap1 ugGAGGUCUAGGAG-ACG-ACGAg ||||| |||| ||| |||| gcCUCCA---CCUCUUGCGUGCUg 2 21 362 382 [mm9:4:41327319-41327339:+] 0.4989 123 0 -25.49 -0.3207 MIMAT0007876 mmu-miR-1907 67123 Ubap1 uggaggucuaggaGACGACGAg |||||||| caggaggagcagaCUGCUGCUg 2 10 347 368 [mm9:4:41336201-41336222:+] 0.5909 145 7 -17.50 -0.1203 MIMAT0009399 mmu-miR-1935 67123 Ubap1 ucUCUAG---GCGGUCG-GAGACGGa :|||| | | :|| ||||||| agGGAUCAAACCCAGGCACUCUGCCa 2 21 126 151 [mm9:4:41327083-41327108:+] 0.4996 150 7 -28.90 -0.4850 MIMAT0009400 mmu-miR-1936 67123 Ubap1 cgGUCAAGUGUCGUC--CAGUCAAu | || | :| || ||||||| ccCUGUGCUAGGAAGCUGUCAGUUu 2 22 642 666 [mm9:4:41336496-41336520:+] 0.6048 148 7 -18.86 -0.6651 MIMAT0009404 mmu-miR-1940 67123 Ubap1 uugacGAGGUGGAAGA---GUC--AGGAGGUa | ||| :| :| ||| ||||||| cuaacCCCCAGUUCUUGAACAGCCUCCUCCAg 2 23 730 761 [mm9:4:41336584-41336615:+] 0.6453 148 7 -20.42 -0.1739 MIMAT0009408 mmu-miR-1943 67123 Ubap1 agGUCCACGGGUCUAGGAGGGAa | ||| :|:| : ||||||| uuCCGGU-UCUACGCCCUCCCUu 2 22 480 501 [mm9:4:41327437-41327458:+] 0.4989 155 7 -24.95 -0.5592 MIMAT0009408 mmu-miR-1943 67123 Ubap1 agguccACGGGU--CUA--GGAGGGAa |||::| | | ||||||| aacgcuUGCUUAAUGUUUACCUCCCUg 2 18 171 197 [mm9:4:41327128-41327154:+] 0.5035 143 7 -19.23 -0.7173 MIMAT0009411 mmu-miR-1306 67123 Ubap1 guaGUGGUGGUCUCGGUUGCa ||:| || |||||||| cuaCAUCCCC--AGCCAACGc 2 19 157 175 [mm9:4:41327114-41327132:+] 0.4996 155 7 -22.31 -0.4375 MIMAT0009418 mmu-miR-669l 67123 Ubap1 ugUAUAUGUACGUG-UGUGUUGa ||||| : | || ||||||| aaAUAUAAGAG-ACAACACAACu 2 21 222 243 [mm9:4:41327179-41327200:+] 0.5074 157 7 -14.69 -0.7616 MIMAT0009421 mmu-miR-669o 67123 Ubap1 ugUAUUUGUA--C-GUG-UGUGUUGAu :||||:|| | || |||||||| uuGUAAAUAUAAGAGACAACACAACUc 2 22 218 244 [mm9:4:41327175-41327201:+] 0.5074 158 7 -15.65 -0.7626 MIMAT0009424 mmu-miR-1953 67123 Ubap1 guCUUCGGACUCUU-GAAAGGGu | | |:| ||:| ||||||| cuGCAUCUUUAGGAUCUUUCCCu 2 21 195 217 [mm9:4:41327152-41327174:+] 0.5074 159 7 -18.14 -1.0636 MIMAT0009425 mmu-miR-1954 67123 Ubap1 uugucccAGAGUGAGACGUCa |:| |:||| ||| uaacuauUUUGAUUCUUCAGa 2 15 898 918 [mm9:4:41336752-41336772:+] 0.8002 122 0 -10.53 -0.1934 MIMAT0009431 mmu-miR-1958 67123 Ubap1 ugaaugACGAAGGUGAAAGGAu ||:|||: ||||||| gauggaUGUUUCUCCUUUCCUa 2 17 455 476 [mm9:4:41327412-41327433:+] 0.4989 164 7 -19.54 -0.5920 MIMAT0009431 mmu-miR-1958 67123 Ubap1 ugAAUGACGA-AGGUGAAAGGAu ||: ||| : ||||||| uuUUGGGGCUAGAUCCUUUCCUc 2 21 369 391 [mm9:4:41336223-41336245:+] 0.5909 143 7 -15.63 -0.1528 MIMAT0009432 mmu-miR-1959 67123 Ubap1 gaGGUGACUCGAUGUAGGGg |||| ||||||||| ugCCACCACACUACAUCCCc 2 19 147 166 [mm9:4:41327104-41327123:+] 0.4996 158 7 -27.04 -0.2503 MIMAT0009435 mmu-miR-1962 67123 Ubap1 uacacaGGGUCACG-----GUCGGAGa |||||| | ||||||| cuaaccCCCAGUUCUUGAACAGCCUCc 2 17 730 756 [mm9:4:41336584-41336610:+] 0.6453 147 7 -22.80 -0.6444 MIMAT0009437 mmu-miR-1964 67123 Ubap1 uuucGGCCUCGGGUCUU-CAGCc ::||:| ::|||| |||| uucuUUGGGGGUUAGAAGGUCGg 2 19 97 119 [mm9:4:41335951-41335973:+] 0.6339 126 0 -26.84 -0.5236 MIMAT0009444 mmu-miR-1970 67123 Ubap1 guUUCGGAUAGGGGUC-ACUGUGu |: |||: ::: :| |||||| ccAGCCCUGCUUUAGGAUGACACa 2 22 758 781 [mm9:4:41336612-41336635:+] 0.6858 121 6 -22.26 -0.7987 MIMAT0009460 mmu-miR-1982.1 67123 Ubap1 gacacccUCUUGUAUCCCACUCu || |||| ||||||| ccuuuccAGCACAU-GGGUGAGa 2 17 681 702 [mm9:4:41336535-41336556:+] 0.6048 158 7 -20.38 -0.6814 MIMAT0011216 mmu-miR-2140 67123 Ubap1 uggugguucuaGACGUGGa ||||||| ucuccucucugCUGCACCa 2 9 390 408 [mm9:4:41336244-41336262:+] 0.5909 140 7 -15.56 -0.6026 MIMAT0012772 mmu-miR-599 67123 Ubap1 caaacuAUUUGACUGUGUu ||:: ||||||| cugcuuUAGGAUGACACAa 2 14 764 782 [mm9:4:41336618-41336636:+] 0.6858 149 7 -12.50 -0.9832 MIMAT0012774 mmu-miR-664 67123 Ubap1 auccgacccCUCAUUUACUUAu || ||||||| cuuuaggauGACACAAUGAAUa 2 14 767 788 [mm9:4:41336621-41336642:+] 0.6858 141 7 -10.02 -0.7830 MIMAT0015640 mmu-miR-3470a 67123 Ubap1 ggucGGACCAGAUGUUUC-ACu :||| ||||||| || ugucUCUGCGGUACAAAGAUGc 2 18 505 526 [mm9:4:41336359-41336380:+] 0.6540 121 0 -12.80 -0.4944 MIMAT0000124 mmu-miR-15b 67123 Ubap1 acauuuGGUACUACACGACGAu || | |||||||| gugguuCCUUUUAGUGCUGCUa 2 17 272 293 [mm9:4:41327229-41327250:+] 0.5074 148 7 -19.38 -0.8879 MIMAT0000124 mmu-miR-15b 67123 Ubap1 acaUUUGGUACUACACGACGAu ::| || || ||||||| ggaGGAGCA-GA-CUGCUGCUg 2 20 349 368 [mm9:4:41336203-41336222:+] 0.5909 143 7 -15.03 -0.1203 MIMAT0000128 mmu-miR-30a 67123 Ubap1 gaaggucagcuccUACAAAUGu |||||||| caacgcuugcuuaAUGUUUACc 2 10 170 191 [mm9:4:41327127-41327148:+] 0.5035 145 7 -9.96 -0.5952 MIMAT0000130 mmu-miR-30b 67123 Ubap1 ucgacucacauccUACAAAUGu |||||||| caacgcuugcuuaAUGUUUACc 2 10 170 191 [mm9:4:41327127-41327148:+] 0.5035 145 7 -8.06 -0.5916 MIMAT0000130 mmu-miR-30b 67123 Ubap1 ucGACUCACAUCCUACAA-AUGu :|| |||| ||||| ||| guUUGUUUGUAUUAUGUUCUACa 2 21 818 840 [mm9:4:41336672-41336694:+] 0.7077 128 0 -12.43 -1.3253 MIMAT0000144 mmu-miR-132 67123 Ubap1 gcugguaccGACA--UCUGACAAu |||| |||||||| cauuugcccCUGUCCAGACUGUUu 2 14 573 596 [mm9:4:41336427-41336450:+] 0.6745 152 7 -16.36 -0.8308 MIMAT0000151 mmu-miR-140 67123 Ubap1 gaugguaucccaUUUUGGUGAc |:|||:||| uugauucuucagAGAACUACUa 2 11 906 927 [mm9:4:41336760-41336781:+] 0.8002 130 0 -10.79 -0.1147 MIMAT0000155 mmu-miR-142-3p 67123 Ubap1 agguauuucauccuuUGUGAUGu ||||||| aggcacucugccaccACACUACa 2 9 139 161 [mm9:4:41327096-41327118:+] 0.4996 140 7 -16.65 -0.3289 MIMAT0000210 mmu-miR-181a 67123 Ubap1 ugaguggcUGUCGCAACUUACAa ||||: |||||| | gauauaauACAGUCUUGAAUCUa 2 16 864 886 [mm9:4:41336718-41336740:+] 0.7649 131 0 -9.85 -0.2085 MIMAT0000215 mmu-miR-186 67123 Ubap1 ucggguuuuccucUUAAGAAac :|||||| ugcuaacuauuuuGAUUCUUca 3 10 895 916 [mm9:4:41336749-41336770:+] 0.8002 121 0 -5.20 -0.2153 MIMAT0000224 mmu-miR-194 67123 Ubap1 agguGUACCUCAAC---GACAAUGu :||| ||| | ||||||| uggcUAUGUAGUCGUCUCUGUUACc 2 19 409 433 [mm9:4:41327366-41327390:+] 0.4989 153 7 -13.90 -0.4439 MIMAT0000224 mmu-miR-194 67123 Ubap1 agguguACCUCAACGACAAUGu | || | ||||||: aacuguUAGAAAU-CUGUUAUu 2 17 564 584 [mm9:4:41327521-41327541:+] 0.4989 126 0 -9.14 -0.1419 MIMAT0000225 mmu-miR-195 67123 Ubap1 cgguuauAAAGACACGACGAu |||: |||||||| ugguuccUUUUAGUGCUGCUa 2 15 273 293 [mm9:4:41327230-41327250:+] 0.5074 158 7 -17.16 -0.8879 MIMAT0000225 mmu-miR-195 67123 Ubap1 cgguuauaaagacACGACGAu ||||||| aggaggagcagacUGCUGCUg 2 9 348 368 [mm9:4:41336202-41336222:+] 0.5909 140 7 -11.35 -0.1239 MIMAT0000229 mmu-miR-199a-5p 67123 Ubap1 cuUGUC--CAUCAGACUUGUGACCc |||| |||| | ||||||| cgACAGCCCUAGUGU-UACACUGGu 2 22 474 497 [mm9:4:41336328-41336351:+] 0.6225 154 7 -19.02 -0.2784 MIMAT0000233 mmu-miR-200b 67123 Ubap1 agUAGUA-AUGGUCCGUCAUAAu ||:|| | |:| || |||| guAUUAUGUUCUA--CAAUAUUa 2 21 826 846 [mm9:4:41336680-41336700:+] 0.7297 120 0 -7.27 -0.1235 MIMAT0000248 mmu-miR-30e 67123 Ubap1 gaaggucaguuccUACAAAUGu |||||||| caacgcuugcuuaAUGUUUACc 2 10 170 191 [mm9:4:41327127-41327148:+] 0.5035 145 7 -8.38 -0.5916 MIMAT0000369 mmu-miR-292-5p 67123 Ubap1 guUUUCUCGGGGGUC-AAACUCa |:: |||: :||| |||||| cuAGGAAGCUGUCAGUUUUGAGu 2 21 649 671 [mm9:4:41336503-41336525:+] 0.6048 132 6 -21.71 -0.4623 MIMAT0000385 mmu-miR-106a 67123 Ubap1 gauggACGUGACAAUCGUGAAAc | || | | ||||||| ugcggUACAAAGAU-GCACUUUu 2 19 511 532 [mm9:4:41336365-41336386:+] 0.6540 144 7 -11.60 -0.6838 MIMAT0000386 mmu-miR-106b 67123 Ubap1 uaGACGUGACAGU-CGUGAAAu | |:|| | ||||||| ugCGGUACAAAGAUGCACUUUu 2 20 511 532 [mm9:4:41336365-41336386:+] 0.6540 142 7 -12.01 -0.7126 MIMAT0000514 mmu-miR-30c 67123 Ubap1 cgacucucacauccUACAAAUGu |||||||| ccaacgcuugcuuaAUGUUUACc 2 10 169 191 [mm9:4:41327126-41327148:+] 0.5035 145 7 -7.16 -0.5916 MIMAT0000514 mmu-miR-30c 67123 Ubap1 cgacucucACAUCCUACAA-AUGu |||| ||||| ||| gguuuguuUGUAUUAUGUUCUACa 2 16 817 840 [mm9:4:41336671-41336694:+] 0.7077 123 0 -11.12 -1.3253 MIMAT0000515 mmu-miR-30d 67123 Ubap1 gaaggucagccccUACAAAUGu |||||||| caacgcuugcuuaAUGUUUACc 2 10 170 191 [mm9:4:41327127-41327148:+] 0.5035 145 7 -9.90 -0.5952 MIMAT0000518 mmu-miR-196a 67123 Ubap1 ggguuGUUGUACUUUG-AUGGAu | |:|| |||| ||||| uccuuCCAUAUUAAACAUACCUg 2 18 209 231 [mm9:4:41336063-41336085:+] 0.6467 129 0 -16.17 -1.0697 MIMAT0000526 mmu-miR-15a 67123 Ubap1 guguuuGGUAAUACACGACGAu || || |||||||| gugguuCCUUUUAGUGCUGCUa 2 17 272 293 [mm9:4:41327229-41327250:+] 0.5074 156 7 -18.17 -0.8845 MIMAT0000526 mmu-miR-15a 67123 Ubap1 guguuugguaauacACGACGAu ||||||| caggaggagcagacUGCUGCUg 2 9 347 368 [mm9:4:41336201-41336222:+] 0.5909 140 7 -15.47 -0.1203 MIMAT0000527 mmu-miR-16 67123 Ubap1 gcgguuauAAAUGCACGACGAu |||| |||||||| ugguuccuUUUA-GUGCUGCUa 2 15 273 293 [mm9:4:41327230-41327250:+] 0.5074 156 7 -18.91 -0.8879 MIMAT0000527 mmu-miR-16 67123 Ubap1 gcgguuauaaaUGCACGACGAu || ||||||| aggaggagcagAC-UGCUGCUg 2 12 348 368 [mm9:4:41336202-41336222:+] 0.5909 141 7 -13.69 -0.1147 MIMAT0000529 mmu-miR-20a 67123 Ubap1 gauGGACGUGAUAUU----CGUGAAAu :||||: || || ||||||| gucUCUGCGGUACAAAGAUGCACUUUu 2 21 506 532 [mm9:4:41336360-41336386:+] 0.6540 155 7 -16.82 -0.7089 MIMAT0000531 mmu-miR-22 67123 Ubap1 ugucAAGAAGUUGA---CCGUCGAa |||||: || ||||||| cugcUUCUUUUCCUGAGGGCAGCUu 2 19 73 97 [mm9:4:41327030-41327054:+] 0.5001 153 7 -17.65 -0.4144 MIMAT0000540 mmu-miR-93 67123 Ubap1 gaugGACGUGCUUGU-CGUGAAAc | |:|| || | ||||||| ucugCGGUACAAAGAUGCACUUUu 2 20 509 532 [mm9:4:41336363-41336386:+] 0.6540 158 7 -17.05 -0.7089 MIMAT0000548 mmu-miR-322 67123 Ubap1 agguuuuGUACUUAACGACGAc | | | ||||||| gugguucCUUUUAGUGCUGCUa 2 16 272 293 [mm9:4:41327229-41327250:+] 0.5074 143 7 -11.55 -0.8946 MIMAT0000548 mmu-miR-322 67123 Ubap1 aggUUUUGUACUUAACGACGAc ::|:|| :| ||||||| ggaGGAGCA--GACUGCUGCUg 2 20 349 368 [mm9:4:41336203-41336222:+] 0.5909 148 7 -18.48 -0.1203 MIMAT0000649 mmu-miR-17 67123 Ubap1 gauGGACGUGACAUU----CGUGAAAc :||||: | || ||||||| gucUCUGCGGUACAAAGAUGCACUUUu 2 21 506 532 [mm9:4:41336360-41336386:+] 0.6540 147 7 -15.69 -0.7126 MIMAT0000657 mmu-miR-200c 67123 Ubap1 agGUAGUAAUGGGCCGUCAUAAu :||:| |:::| || |||| ugUAUUA-UGUUCUACAAUAUUa 2 22 825 846 [mm9:4:41336679-41336700:+] 0.7297 123 0 -8.34 -0.1333 MIMAT0000659 mmu-miR-212 67123 Ubap1 accGGCACUGACCUCUGACAAu || || | |||||||| ugcCCCUG--UCCAGACUGUUu 2 20 577 596 [mm9:4:41336431-41336450:+] 0.6745 148 7 -16.31 -0.8308 MIMAT0000673 mmu-miR-181b 67123 Ubap1 uggguggcUGUCGUUACUUACAa ||||: ||||| | gauauaauACAGUCUUGAAUCUa 2 16 864 886 [mm9:4:41336718-41336740:+] 0.7649 123 0 -9.15 -0.2085 MIMAT0000674 mmu-miR-181c 67123 Ubap1 ugaguggcUGUC-CAACUUACAa |||| |||||| | gauauaauACAGUCUUGAAUCUa 2 15 864 886 [mm9:4:41336718-41336740:+] 0.7649 121 0 -7.36 -0.2124 MIMAT0000677 mmu-miR-7a 67123 Ubap1 ugUUGUUUUAGUGAUCAGAAGGu |:: :|: || :||||||| uuAGUUGAGACA-AGGUCUUCCu 2 22 322 343 [mm9:4:41327279-41327300:+] 0.4978 147 7 -13.60 -0.2187 MIMAT0000678 mmu-miR-7b 67123 Ubap1 ugUUGUUUUAGUGUUCAGAAGGu |:: :|: || |:||||||| uuAGUUGAGACA-AGGUCUUCCu 2 22 322 343 [mm9:4:41327279-41327300:+] 0.4978 155 7 -14.73 -0.2187 MIMAT0000704 mmu-miR-361 67123 Ubap1 cauggggaccucuAAGACUAUu |||||||| gaauggcuuuguuUUCUGAUAg 2 10 47 68 [mm9:4:41327004-41327025:+] 0.4975 145 7 -16.36 -0.6899 MIMAT0004745 mmu-miR-384-5p 67123 Ubap1 uguaaCGGAUCCUUAACAAAUGu ||:|: | ||||||| ccaacGCUUGCUUAAUGUUUACc 2 19 169 191 [mm9:4:41327126-41327148:+] 0.5035 150 7 -13.40 -0.5879 MIMAT0001081 mmu-miR-196b 67123 Ubap1 ggguuGUUGUCCUUUG-AUGGAu | |:| |||| ||||| uccuuCCAUAUUAAACAUACCUg 2 18 209 231 [mm9:4:41336063-41336085:+] 0.6467 121 0 -14.36 -1.0722 MIMAT0001537 mmu-miR-429 67123 Ubap1 ugcCGUAAU--GGUCUGUCAUAAu |:|||| :: ||| |||| uuuGUAUUAUGUUCUACAAUAUUa 2 20 823 846 [mm9:4:41336677-41336700:+] 0.7077 122 0 -7.65 -0.1178 MIMAT0003128 mmu-miR-485 67123 Ubap1 cuuaaguAGUGCCGGUCGGAGa || :| ||||||| ccccaguUCUUGAACAGCCUCc 2 16 735 756 [mm9:4:41336589-41336610:+] 0.6453 147 7 -17.99 -0.6407 MIMAT0003169 mmu-miR-539 67123 Ubap1 ugUGUGGUUCCU--AU-UAAAGAGg || |: : || |: ||||||| caACUCUUGUGAAUUGUAUUUCUCu 2 21 239 263 [mm9:4:41327196-41327220:+] 0.5074 142 7 -8.86 -0.6427 MIMAT0003182 mmu-miR-494 67123 Ubap1 cuccaAAGGGC-ACAUACAAAGu || | | || ||||||| uagacUUGCAGAUGGAUGUUUCu 2 18 445 467 [mm9:4:41327402-41327424:+] 0.4989 152 7 -10.37 -0.1795 MIMAT0003187 mmu-miR-20b 67123 Ubap1 gaugGACGUGAUACU-CGUGAAAc | |:|| | || ||||||| ucugCGGUACAAAGAUGCACUUUu 2 20 509 532 [mm9:4:41336363-41336386:+] 0.6540 158 7 -17.43 -0.7089 MIMAT0003730 mmu-miR-592 67123 Ubap1 uguaguagcGUAUAACUGUGUUa :| : |||||||| gcccugcuuUAGGAUGACACAAu 2 15 761 783 [mm9:4:41336615-41336637:+] 0.6858 146 7 -15.18 -0.9095 MIMAT0003453 mmu-miR-497 67123 Ubap1 auguuuggugucaCACGACGAc |||||||| gugguuccuuuuaGUGCUGCUa 2 10 272 293 [mm9:4:41327229-41327250:+] 0.5074 145 7 -14.72 -0.8946 MIMAT0003453 mmu-miR-497 67123 Ubap1 augUUUGGUGUCACACGACGAc :|: :||| ||||||| cagGAGGAGCAGACUGCUGCUg 2 20 347 368 [mm9:4:41336201-41336222:+] 0.5909 151 7 -20.81 -0.1191 MIMAT0003456 mmu-miR-495 67123 Ubap1 uucuUCACGUGGUA-CAAACAAa ||| | |: | ||||||| aaccAGU-CUCUUUGGUUUGUUu 2 19 804 825 [mm9:4:41336658-41336679:+] 0.6858 147 7 -10.84 -0.8847 MIMAT0003482 mmu-miR-499 67123 Ubap1 uuUGUAGUGACGUUCAGAAUu |:|| | | | ||||||: ggAUAU-AAUAC-AGUCUUGa 2 20 863 881 [mm9:4:41336717-41336735:+] 0.7649 131 0 -10.05 -0.4470 MIMAT0004855 mmu-miR-876-3p 67123 Ubap1 acUUAAUGAAACAUUUGGUGAu :||| :| | :|||:||| uuGAUUCUUCAGAGAACUACUa 2 21 906 927 [mm9:4:41336760-41336781:+] 0.8002 140 0 -10.69 -0.1125 MIMAT0005850 mmu-miR-1192 67123 Ubap1 uuaaacCAGACAAA-CAAACAAa |||| ||| ||||||| aaaccaGUCUCUUUGGUUUGUUu 2 17 803 825 [mm9:4:41336657-41336679:+] 0.6858 163 7 -13.67 -0.8675

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G038765 Ubap1 Mus musculus 67123

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ubap1 mmu-miR-199a-5p beg:480 end:497 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |||| | ||||||| &5' -------TAGTGTT-ACACTGG- 3' Ubap1 mmu-miR-199bstar beg:480 end:497 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||| | ||||||| &5' -------TAGTGTT-ACACTGG- 3' Ubap1 mmu-miR-1186 beg:713 end:732 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||| .||||||| &5' -----CTTGTCACTCAGCACT- 3' Ubap1 mmu-miR-1962 beg:737 end:756 pic:3' TACACAGGGTCACGGTCGGAGA 5'& ||.|. ||||||| &5' ----GTTCTTGAA-CAGCCTC- 3' Ubap1 mcmv-miR-M95-1-5p beg:698 end:718 pic:3' GTTCGCTGTGTTCGGGTGCTGG 5'& .|| |||.| |||||||. &5' -GAGAAA-ACAGG-CCACGACT 3' Ubap1 mmu-miR-762 beg:748 end:766 pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& | ||. |.|||||||. &5' -----G-CCTC-CTCCAGCCCT 3' Ubap1 mmu-miR-344 beg:365 end:384 pic:3' TGTCAGTCCGAAA--CCGATCTAGT 5'& |.|| ||||||||| &5' --------GTTTTGGGGCTAGATC- 3' Ubap1 mmu-miR-1906 beg:386 end:406 pic:3' TCGGGACGGAGTCCGACGACGT 5'& |.|| |||| |||||||| &5' --CTCT-CCTCT--CTGCTGCA 3' Ubap1 mmu-miR-141star beg:171 end:184 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& |.| ||||||| &5' ---------GTA--GGAAGAT- 3' Ubap1 mmu-miR-365 beg:626 end:638 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& ||||||||. &5' -------------GGGGCATTG 3' Ubap1 mghv-miR-M1-2 beg:287 end:297 pic:3' TTTCTCCCCCTCTCCCCCAGAC 5'& ||||||| &5' --------------GGGGTCT- 3' Ubap1 mmu-miR-1982.1 beg:685 end:703 pic:3' GACACCCTCTTGTATCCCACTCT 5'& || |||| |||||||| &5' -------AGCACAT-GGGTGAGA 3' Ubap1 mmu-miR-1197 beg:236 end:250 pic:3' TCTTCATCTGGTACACAGGAT 5'& ||| ||||||| &5' ------AGAA---GTGTCCT- 3' Ubap1 mmu-let-7a beg:539 end:556 pic:3' TTGATATGTTGGATGATGGAGT 5'& .||| ||.|||| &5' ------GCAAAGT-CTGCCTC- 3' Ubap1 mmu-let-7b beg:539 end:556 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .||| ||.|||| &5' ------GCAAAGT-CTGCCTC- 3' Ubap1 mmu-let-7c beg:539 end:556 pic:3' TTGGTATGTTGGATGATGGAGT 5'& .||| ||.|||| &5' ------GCAAAGT-CTGCCTC- 3' Ubap1 mmu-let-7d beg:539 end:557 pic:3' TTGATACGTTGGATGATGGAGA 5'& |||| ||.||||| &5' ------GCAAAGT-CTGCCTCT 3' Ubap1 mmu-let-7f beg:539 end:556 pic:3' TTGATATGTTAGATGATGGAGT 5'& .||| ||.|||| &5' ------GCAAAGT-CTGCCTC- 3' Ubap1 mmu-let-7g beg:535 end:556 pic:3' TTGACA-TGTTTGATGATGGAGT 5'& || .|||| | ||.|||| &5' ---TGGGGCAAAGT-CTGCCTC- 3' Ubap1 mmu-let-7i beg:534 end:556 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |..| .|||| | ||.|||| &5' -ATGGGGCAAAGT-CTGCCTC- 3' Ubap1 mmu-miR-106a beg:512 end:532 pic:3' GATGGACGTGACAAT-CGTGAAAC 5'& |.|| ||||||| &5' ------GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-106b beg:512 end:532 pic:3' TAGACGTGACAGT-CGTGAAAT 5'& |.|| ||||||| &5' ----GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-1188 beg:453 end:475 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||||| || .||| | || &5' TCCTGGGCCCGCCTTCC-CC- 3' Ubap1 mmu-miR-125a-3p beg:46 end:70 pic:3' CCGAGG-GTTCTTGGAGTGGACA 5'& |||||. || | |||||.||| &5' GGCTCTGCAC--AGCTCACTTGT 3' Ubap1 mmu-miR-132 beg:575 end:596 pic:3' GCTGGTACCGACA--TCTGACAAT 5'& .|| |||| |||||||| &5' --GCCC---CTGTCCAGACTGTT- 3' Ubap1 mmu-miR-135a beg:787 end:809 pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& ||| |||| |||.||| ||| &5' -CACCTAGGCATAGAAA-CCA-- 3' Ubap1 mmu-miR-145star beg:635 end:656 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .||.| |.||||| &5' --GGAGCCCCTGTGCTAGGAA- 3' Ubap1 mmu-miR-146a beg:729 end:746 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& ||||| |||||||. &5' AACCCC-------CAGTTCTT- 3' Ubap1 mmu-miR-146a beg:288 end:309 pic:3' TTGGGTACCTTA-AGT---CAAGAGT 5'& |||..| || ||||||| &5' ------TGGGGTCTCTAATGTTCTCA 3' Ubap1 mmu-miR-146b beg:735 end:746 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||||||. &5' -------------CAGTTCTT- 3' Ubap1 mmu-miR-146b beg:287 end:309 pic:3' TCGGATACCTTA-AGT---CAAGAGT 5'& |||..| || ||||||| &5' ------TGGGGTCTCTAATGTTCTCA 3' Ubap1 mmu-miR-147 beg:43 end:60 pic:3' ATCGTCTTCGTAAAGGCGTGTG 5'& .||.|| ||.||||| &5' ----GGAGGC---TCTGCACA- 3' Ubap1 mmu-miR-150star beg:638 end:653 pic:3' GATAGGGGGTCCGGACATGGTC 5'& || |||||.|.|| &5' -------CC---CCTGTGCTAG 3' Ubap1 mmu-miR-150star beg:142 end:168 pic:3' GATAGG-GGGTCCGGACATGGTC 5'& ||.| |||||||||| .| | &5' CTGTGAGCCCAGGCCTGAGCTGG 3' Ubap1 mmu-miR-152 beg:646 end:670 pic:3' GGTTCAA-GACAGTACGTGACT 5'& |.|.| |||||| |. .||| &5' CTAGGAAGCTGTCA-GTTTTGA 3' Ubap1 mmu-miR-15a beg:352 end:369 pic:3' GTGTTTGGTAATACACGACGAT 5'& .||.|| |||||||. &5' -GCAGAC-------TGCTGCTG 3' Ubap1 mmu-miR-15b beg:347 end:369 pic:3' ACATTTGGTACTACACGACGAT 5'& | .| || || |||||||. &5' -GAGGAGCA-GAC-TGCTGCTG 3' Ubap1 mmu-miR-16 beg:352 end:369 pic:3' GCGGTTATAAATGCACGACGAT 5'& || || |||||||. &5' -GCAG------AC-TGCTGCTG 3' Ubap1 mmu-miR-17 beg:509 end:532 pic:3' GATGGACGTGACATT-CGTGAAAC 5'& ||.| |.|| ||||||| &5' CTGCG-GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-188-3p beg:322 end:344 pic:3' ACGTTTGGGACGTA-CACCCTC 5'& || ||| | |||||| &5' -GCT-ACCAAGAAGAGTGGGA- 3' Ubap1 mmu-miR-188-3p beg:52 end:73 pic:3' ACGT-TTGGGACGTACACCCTC 5'& ||| |.|.| ||||||. &5' -GCACAGCTCACT-TGTGGGG- 3' Ubap1 mmu-miR-1892 beg:378 end:400 pic:3' TAGG-AGGGAGGGCAGGGGTTTA 5'& |||| |.||||.| ||.|. &5' ATCCTTTCCTCTCCTCTCT---- 3' Ubap1 mmu-miR-1894-3p beg:379 end:405 pic:3' GAGGGAAGT-G-GGAGAGGGAACG 5'& |||.||| | ||||||. ||| &5' -TCCTTTCCTCTCCTCTCTGCTGC 3' Ubap1 mmu-miR-18a beg:512 end:532 pic:3' GATAGACGTGA-TCTACGTGGAAT 5'& |.|| ||||||||.|| &5' ------GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-18b beg:510 end:532 pic:3' GATTGTCGTGA-TCTACGTGGAAT 5'& .|.|.|| ||||||||.|| &5' ---GCGGTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-1902 beg:521 end:533 pic:3' TTCAGTACGGATGACGTGGAGA 5'& |||||.|.| &5' -------------TGCACTTTT 3' Ubap1 mmu-miR-1906 beg:3 end:25 pic:3' TCGGGACGGAGTCCGACGACGT 5'& .|||||||. | ||| |||| &5' GGCCCTGCTAC-GGCC-CTGC- 3' Ubap1 mmu-miR-1907 beg:607 end:629 pic:3' TGGAGGTC-TAGGAGACGACGAG 5'& ||| |||||||||||| | &5' ----CCATAATCCTCTGCTGCCC 3' Ubap1 mmu-miR-1935 beg:605 end:625 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| || |||||||. &5' --AGA-CCATAATCCTCTGCT- 3' Ubap1 mmu-miR-1935 beg:544 end:563 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& .||.||| |.|||||| &5' ----GTCTGCCT-CTTCTGCC- 3' Ubap1 mmu-miR-1936 beg:645 end:666 pic:3' CGGTCAAGTGTCGTCCAGTCAAT 5'& ||.|| ||| ||||||| &5' GCTAGGA---AGCT-GTCAGTT- 3' Ubap1 mmu-miR-1940 beg:737 end:761 pic:3' TTGACGAGGTGGAAGAGTC--AGGAGGTA 5'& |.||. ||| ||||||| &5' ----GTTCTTGAA---CAGCCTCCTCCA- 3' Ubap1 mmu-miR-1946a beg:306 end:328 pic:3' TTTTCACACACGGTGGTGA--CGGGCCGA 5'& |||| || |||.|||| &5' ----------GCCAAAACCTGGCCTGGCT 3' Ubap1 mmu-miR-195 beg:357 end:371 pic:3' CGGTTATAAAGAC-ACGACGAT 5'& ||| |||||.| &5' ----------CTGCTGCTGTT- 3' Ubap1 mmu-miR-1955 beg:354 end:379 pic:3' TTTTC-GACGTCACG-TAGGACCCTGA 5'& || |||| ||| .|..||||.|| &5' ---AGACTGC--TGCTGTTTTGGGGCT 3' Ubap1 mmu-miR-1957 beg:188 end:207 pic:3' CAGTATACGAGATGGTGAC 5'& .||||||||| |.|.|| &5' --TATATGCTCT-CTATTG 3' Ubap1 mmu-miR-1959 beg:409 end:431 pic:3' GAGG-TGACTCGATGTAGGGG 5'& || ||||.||| | ||| &5' -TCAGACTGGGCT-CTAACCC 3' Ubap1 mmu-miR-1970 beg:764 end:782 pic:3' GTTTCGGATAGGGGTC--ACTGTGT 5'& |...|| ||||||| &5' ----------CTTTAGGATGACACA 3' Ubap1 mmu-miR-1971 beg:753 end:771 pic:3' AGA-GTCGGGTCGGAAATG 5'& || |||||| ||.|| &5' -CTCCAGCCCTGCTTT--- 3' Ubap1 mmu-miR-1983 beg:686 end:702 pic:3' TCTTTTGTACGAG-GTCCACTC 5'& || ..|||||| &5' ---------GCACATGGGTGAG 3' Ubap1 mmu-miR-203star beg:904 end:927 pic:3' ACAACTT-GACAGTTCTTGGTGA 5'& |||| || .|||||.||| &5' --TTGATTCTTCAGAGAACTACT 3' Ubap1 mmu-miR-207 beg:337 end:357 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |||| ||| ||||||.||| &5' --GGGA--AGA--CAGGAGGAGC 3' Ubap1 mmu-miR-20a beg:509 end:532 pic:3' GATGGACGTGATATT-CGTGAAAT 5'& ||.| |.|| ||||||| &5' CTGCG-GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-20b beg:512 end:532 pic:3' GATGGACGTGATACT-CGTGAAAC 5'& |.|| || ||||||| &5' ------GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-212 beg:575 end:596 pic:3' ACCGGCACTGACC--TCTGACAAT 5'& ||| ||| |||||||| &5' --GCCC---CTGTCCAGACTGTT- 3' Ubap1 mmu-miR-2134 beg:26 end:48 pic:3' CGTGG-GGCAAAGGGTTCTG 5'& ||||| || || ||||||. &5' GCACCACCATTCCCCAAGG- 3' Ubap1 mmu-miR-2134 beg:318 end:335 pic:3' CGTGGGGCAAAGGGTTCTG 5'& ||.| |||||| &5' ----CCTGGCTACCAAGA- 3' Ubap1 mmu-miR-2140 beg:388 end:408 pic:3' TGGTGGTTCTA-GACGTGGA 5'& .| || ||||||| &5' -TCTCCTCTCTGCTGCACC- 3' Ubap1 mmu-miR-2145 beg:0 end:25 pic:3' TTGGTCCGGG------CTGGGACGA 5'& .||| ||||| |.|||||| &5' GACCTGGCCCTGCTACGGCCCTGC- 3' Ubap1 mmu-miR-2145 beg:749 end:769 pic:3' TTGGTCCGGGCTGGGACGA 5'& |.|| .|| .||||||| &5' AGCCTCCTCCAGCCCTGCT 3' Ubap1 mmu-miR-2146 beg:671 end:689 pic:3' GTGTACCTTGGGAAGAGGTG 5'& ||| ..||| |.|||| &5' --CATT-GGCCC-TTTCCA- 3' Ubap1 mmu-miR-218-1star beg:815 end:836 pic:3' CCACGAACTGCCTTGGTACAAA 5'& |.||| |..||||| &5' ---GTTTGTTTGTATTATGTT- 3' Ubap1 mmu-miR-27bstar beg:408 end:426 pic:3' CAAGTGGTTAGTC-GATTCGAGA 5'& | .|||| ||..||||| &5' ------CTGTCAGACTGGGCTCT 3' Ubap1 mmu-miR-2861 beg:142 end:161 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|. || |||||||. &5' CTGTGAGC--CCAGGCCT- 3' Ubap1 mmu-miR-291a-5p beg:893 end:911 pic:3' TCTCTCCCGGA-GGTGAAACTAC 5'& ||. |.|.|||||| &5' -------GCTAACTATTTTGAT- 3' Ubap1 mmu-miR-291b-3p beg:510 end:532 pic:3' TGTT-TGTTTTACCTACGTGAAA 5'& .|.. ||||| |||||||||| &5' GCGGTACAAA---GATGCACTTT 3' Ubap1 mmu-miR-293 beg:505 end:519 pic:3' TGTGATGTTTGAGACGCCGTGA 5'& ||||||||.|| &5' ----------CTCTGCGGTAC- 3' Ubap1 mmu-miR-294star beg:225 end:241 pic:3' TCTATCCCGGAGGTAAAACTCA 5'& ||| ..||||||| &5' --------CCTGTGTTTTGAG- 3' Ubap1 mmu-miR-296-3p beg:747 end:766 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& ||||||| .|||.|||| &5' ----AGCCTCC-TCCAGCCCT- 3' Ubap1 mmu-miR-298 beg:603 end:625 pic:3' CCCTTCTTGTC-GGG---AGGAGACGG 5'& .|| || ||||||||. &5' --------TAGACCATAATCCTCTGCT 3' Ubap1 mmu-miR-29bstar beg:788 end:811 pic:3' ATTTGG--TGGTATACTTTGGTCG 5'& ||| . |||| ||||||||. &5' ---ACCTAGGCATA-GAAACCAGT 3' Ubap1 mmu-miR-300star beg:519 end:538 pic:3' TGTTTCCTAT-TGGAGAGAAGTT 5'& |||. ||.|.|||||| &5' ------GATGCACTTTTCTTCA- 3' Ubap1 mmu-miR-3099 beg:384 end:405 pic:3' AGGGGTTGGAGAGA-GATCGGAT 5'& |||.| ||||||| || || &5' TCCTCT-CCTCTCTGCT-GC--- 3' Ubap1 mmu-miR-3099star beg:641 end:660 pic:3' GTTCCCGAC-CT-TCCTTCGACC 5'& ||| | ||||||||| &5' ------CTGTGCTAGGAAGCTG- 3' Ubap1 mmu-miR-30astar beg:430 end:450 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& | .| || | |||||.|| &5' ---GTGGA-ATGCAACTGAGAG 3' Ubap1 mmu-miR-30estar beg:430 end:450 pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||..| || | |||||.|| &5' ---GTGGA-ATGCAACTGAGAG 3' Ubap1 mmu-miR-322 beg:349 end:369 pic:3' AGGTTTTGTACTTAACGACGAC 5'& ..|.|| || |||||||| &5' ---GGAGCA-GAC-TGCTGCTG 3' Ubap1 mmu-miR-330star beg:225 end:239 pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||||||.|||| &5' -----------CCTGTGTTTTG- 3' Ubap1 mmu-miR-331-5p beg:447 end:470 pic:3' CCTAG--GGACCCTGGTATGGATC 5'& ||.|| |||||| || .||| &5' GGGTCTTCCTGGG-CCC-GCCT-- 3' Ubap1 mmu-miR-331-5p beg:210 end:232 pic:3' CCTAGGGACCCTG-GTATGGATC 5'& ||| |||||||. &5' ---TCCATATTAAACATACCTG- 3' Ubap1 mmu-miR-335-3p beg:685 end:705 pic:3' CCAGTCCTCGTTA--TTACTTTTT 5'& |||| ..|||.||| &5' -------AGCACATGGGTGAGAAA 3' Ubap1 mmu-miR-3471 beg:278 end:298 pic:3' TTAC-GGAATGTCAACCTAGAGT 5'& | .||| | ||.|||| &5' ---GTTCTTTCTG--GGGTCTC- 3' Ubap1 mmu-miR-3473 beg:184 end:204 pic:3' CCGACTCGGTA----GAGAGGT 5'& ||.|| |||||.| &5' ---TGGGCATATATGCTCTCTA 3' Ubap1 mmu-miR-3475 beg:72 end:95 pic:3' AAGTTTGGTAC--ACGGAGGTCT 5'& |.|| . |||.|||||| &5' ---AGACGGGACATGCTTCCAGA 3' Ubap1 mmu-miR-3475 beg:741 end:762 pic:3' AAGTTTGGTACACGGAGGTCT 5'& | ||| ||||||| &5' -TTGAACAGCCT-CCTCCAG- 3' Ubap1 mmu-miR-376b beg:133 end:151 pic:3' TTCACCTACAA--GGAGATACTA 5'& |||| .||||.||| &5' -------TGTTAGTCTCTGTGA- 3' Ubap1 mmu-miR-384-3p beg:635 end:656 pic:3' TAACACTTGTTAAA--GATCCTTA 5'& || ||.| ||||||| &5' --TG-GAGCCCCTGTGCTAGGAA- 3' Ubap1 mmu-miR-423-5p beg:541 end:568 pic:3' TTTCAGAGCGAG-AGACGGGGAGT 5'& ||||||| ||| |||||| || &5' AAAGTCTGCCTCTTCTGCCAGGCA 3' Ubap1 mmu-miR-449b beg:397 end:414 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||| .|| |||||.| &5' ----GCT-GCACCACTGTC- 3' Ubap1 mmu-miR-450a-3p beg:19 end:46 pic:3' TACTTACGTT-TCGT-------AGGGGTTA 5'& ||| |||| ||||||| &5' -----TGCCACAGCACCACCATTCCCCAA- 3' Ubap1 mmu-miR-450b-3p beg:288 end:309 pic:3' TACGTACGTT-TTACAAGGGTTA 5'& | .| | |||||||.||. &5' --GGGT-CTCTAATGTTCTCAG- 3' Ubap1 mmu-miR-467e beg:117 end:139 pic:3' TGTATATGTACGAGTGTGAATA 5'& ||.|. | |.| ||||||.| &5' --ATGTGGA-GTTGACACTTGT 3' Ubap1 mmu-miR-469 beg:31 end:52 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& ||||| || ||.||||| &5' ---CACCAT--TCCCC-AAGGAGGC- 3' Ubap1 mmu-miR-485 beg:736 end:756 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& |.||| .| ||||||| &5' -AGTTCT---TGAACAGCCTC- 3' Ubap1 mmu-miR-488 beg:249 end:267 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||| ..| |||||| &5' --CCACTT--TGGGCTTTCA- 3' Ubap1 mmu-miR-497 beg:347 end:369 pic:3' ATGTTTGGTGTCACACGACGAC 5'& .|. .||| |||||||| &5' ---GAGGAGCAGACTGCTGCTG 3' Ubap1 mmu-miR-501-5p beg:847 end:867 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& |.|.| ||||||||| &5' ----ATCTAAATACAAAGGAT- 3' Ubap1 mmu-miR-503 beg:352 end:371 pic:3' GACGTCATGACAAGGGCGACGAT 5'& |||| |||| |.||||.| &5' --GCAG-ACTG---CTGCTGTT- 3' Ubap1 mmu-miR-509-5p beg:276 end:295 pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||.|| |. ||||||.|| &5' -TGGTT-CT---TTCTGGGGT- 3' Ubap1 mmu-miR-509-5p beg:484 end:506 pic:3' TACTAACGGTGT----AAGACCTCAT 5'& ||..||| |||||||||. &5' -----TGTTACACTGGTTCTGGAGTG 3' Ubap1 mmu-miR-592 beg:763 end:784 pic:3' TGTAGTAGCGT-ATA--ACTGTGTTA 5'& .|| || ||||||||| &5' -------TGCTTTAGGATGACACAAT 3' Ubap1 mmu-miR-599 beg:767 end:783 pic:3' CAAACTATTTGACTGTGTT 5'& ||.. |||||||| &5' ------TAGGATGACACAA 3' Ubap1 mmu-miR-669a beg:43 end:63 pic:3' TGTACTTGTACGTG-TGTGTTGA 5'& |.| || | .||||.|| &5' ----GGAG--GCTCTGCACAGCT 3' Ubap1 mmu-miR-671-3p beg:143 end:169 pic:3' CCAC-CTCGGGACT---CTTGGCCT 5'& || |||||| ||.|.||. &5' --TGTGAGCCCAGGCCTGAGCTGGG 3' Ubap1 mmu-miR-671-5p beg:243 end:267 pic:3' GAGGTCGGG-GAGGTCCCGAAGGA 5'& ||| ||| ||.. ||||||.| &5' -TCCTTCCCACTTT-GGGCTTTC- 3' Ubap1 mmu-miR-675-5p beg:391 end:409 pic:3' TGACACCCGGGAAA-GGCGTGGT 5'& |.|| |.|||||| &5' --------CTCTCTGCTGCACCA 3' Ubap1 mmu-miR-684 beg:330 end:348 pic:3' AACTGAACTT-CCCTTTTGA 5'& || ||. |||||.|| &5' --GAA--GAGTGGGAAGAC- 3' Ubap1 mmu-miR-684 beg:61 end:79 pic:3' AACTGAACTTCCCTTTTGA 5'& ||||| .|||||.|| &5' ---ACTTGTGGGGAAGAC- 3' Ubap1 mmu-miR-693-3p beg:645 end:661 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||.| |.||||||. &5' -----GCTA-----GGAAGCTGT 3' Ubap1 mmu-miR-706 beg:585 end:601 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& |||| ||||||.| &5' -------AGACT--GTTTCTTT 3' Ubap1 mmu-miR-710 beg:176 end:188 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& ||||.|||| &5' -------------AAGATTTGG 3' Ubap1 mmu-miR-744 beg:747 end:768 pic:3' ACGACAATCGGGA----TCGGGGCGT 5'& ||||. |||||.|| &5' -------AGCCTCCTCCAGCCCTGC- 3' Ubap1 mmu-miR-759 beg:806 end:835 pic:3' CAGTTTT----AACAAACGTGAGACG 5'& ||| |||||||.|.| ||. &5' GTCTCTTTGGTTTGTTTGTATTATGT 3' Ubap1 mmu-miR-761 beg:613 end:627 pic:3' ACACAGTCAAAGTGGGACGACG 5'& || |.||||||| &5' ----------TC-CTCTGCTGC 3' Ubap1 mmu-miR-761 beg:391 end:405 pic:3' ACACAGTCAAAGTGGGACGACG 5'& | |.||||||| &5' -----------CTCTCTGCTGC 3' Ubap1 mmu-miR-7astar beg:804 end:825 pic:3' ATACCGTCT--GACACTAAACAAC 5'& ||| || ||.|||||| &5' -----CAGTCTCTTTGGTTTGTT- 3' Ubap1 mmu-miR-871 beg:653 end:673 pic:3' GTACTGACCGTGATTAGACTTAT 5'& .||| || | |.|||.|| &5' ----GCTGTCAGT--TTTGAGTA 3' Ubap1 mmu-miR-876-3p beg:914 end:928 pic:3' ACTTAATGAAACATTTGGTGAT 5'& | .|||.|||| &5' -----------GAGAACTACTA 3' Ubap1 mmu-miR-877 beg:545 end:562 pic:3' GGGACGCGGTAGAGGAGATG 5'& .|||| |||.|||.| &5' -TCTGC-----CTCTTCTGC 3' Ubap1 mmu-miR-877 beg:605 end:624 pic:3' GGGACGC-GGTAG-AGGAGATG 5'& | |||| ||||||.| &5' ------GACCATAATCCTCTGC 3' Ubap1 mmu-miR-879 beg:599 end:622 pic:3' CCGAATCTCGATATTCGGAGA 5'& |||||||| | |||| ||||| &5' GGCTTAGA-CCATAATCCTCT 3' Ubap1 mmu-miR-883a-5p beg:292 end:311 pic:3' CATTGACGATGAAGAGAGTCGT 5'& || ||| .||||||| &5' ----CT-CTAATGTTCTCAGC- 3' Ubap1 mmu-miR-883a-5p beg:709 end:730 pic:3' CATTGACGATGAAGAGAGTCGT 5'& || || || ||||||| &5' ---ACGACTTG-TCACTCAGCA 3' Ubap1 mmu-miR-93 beg:512 end:532 pic:3' GATGGACGTGCTTGT-CGTGAAAC 5'& |.|| || | ||||||| &5' ------GTACAAAGATGCACTTT- 3' Ubap1 mmu-miR-98 beg:539 end:556 pic:3' TTGTTATGTTGAATGATGGAGT 5'& .||| ||.|||| &5' ------GCAAAGT-CTGCCTC- 3' Ubap1 mmu-miR-669j beg:182 end:198 pic:3' ACAAACGTACACTC--ATATACGT 5'& ||.| ||||||| &5' ----------TGGGCATATATGC- 3' Ubap1 mmu-miR-542-5p beg:458 end:477 pic:3' AGCACTGTACTACTAGGGGCTC 5'& |.| ||||||| &5' ----GGCCCGCCT-TCCCCGA- 3' Ubap1 mmu-miR-1946b beg:614 end:631 pic:3' TTTTCGTACACGGTGGTGACGGGCCG 5'& || | |||||||| &5' -----------CCTCTGCTGCCCGG- 3' Ubap1 mmu-miR-294star beg:653 end:672 pic:3' TCTATCCCGG-AGGTAAAACTCA 5'& ||. || .|||||||| &5' -------GCTGTCAGTTTTGAGT 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ubap1 mmu-let-7d 536 558 UGAUACGUUGGAU--GAUGGAGA- ||| ::| ||:||||| --CAUGGGGCAAAGUCUGCCUCUU Ubap1 mmu-miR-100 490 517 -GUGUUCAAG-CCU-----AGAUGCCCAA ||| :|||| ||| |||:||| ACACUGGUUCUGGAGUGUCUCUGCGGU-- Ubap1 mmu-miR-126-3p 507 520 CGUAAUAAUGAG-UGCCAUGCU ||| :|||||| --------UCUCUGCGGUACA- Ubap1 mmu-miR-128a 43 73 UUUUCUCUGGCCA------AGUGA-CACU- ||:|||:|: ||||| |||: CAAGGAGGCUCUGCACAGCUCACUUGUGGG Ubap1 mmu-miR-128b 43 73 CUUUCUCUGGCCA------AGUGA-CACU- ||:|||:|: ||||| |||: CAAGGAGGCUCUGCACAGCUCACUUGUGGG Ubap1 mmu-miR-133a 56 85 -UGUCGAC----CAA--CUUC--CCCUGGUU |||||| || |||| ||||| CACAGCUCACUUGUGGGGAAGACGGGACA-- Ubap1 mmu-miR-134 392 416 -GGGGAGACCA-GUUGGU--CAGUGU ||:||||| | |||| |||| UCCUCUCUGCUGC-ACCACUGUCAG- Ubap1 mmu-miR-135a 689 714 AGUGUAUCCUUA-UUUU--UCGGUAU |||||:|| |||| :|||| GCACAUGGGUGAGAAAACAGGCCAC- Ubap1 mmu-miR-135b 689 714 -GUGUAUCCUUACUUU---UCGGUAU |||||:|| |||| :|||| GCACAUGGGUGAGAAAACAGGCCAC- Ubap1 mmu-miR-138 24 38 CUAAGUGUUGUGGUCGA ||||:||||| | ---CCACAGCACCACCA Ubap1 mmu-miR-140* 493 519 AGGCACCAAGAU------GGGACACCAU- |||||||: |:||| |||| ---CUGGUUCUGGAGUGUCUCUGCGGUAC Ubap1 mmu-miR-143 349 374 ACUCGAUGUC--ACGAAG-UAGAGU ||| :||| |||| :|:|: GGAGGAGCAGACUGCUGCUGUUUUG Ubap1 mmu-miR-149 335 361 CCUCACU--UCUGUG--CCUCGGUCU- |||||: ||||| |||| |||| AGAGUGGGAAGACAGGAGGAG-CAGAC Ubap1 mmu-miR-152 427 449 -GGGUUCAAGACAGUACGU-GACU- ||||||| ||||| |||| ACCCAAGUGGA---AUGCAACUGAG Ubap1 mmu-miR-15b 605 628 ACAUUUGGUACUAC---ACGACGAU ||:||||| || |||||| -UUAGACCAUAAUCCUCUGCUGCC- Ubap1 mmu-miR-16 361 381 GCGGUUAUAAAUGCACGACGAU- ||:: |:||| | |||| UGCUGCUGUUUUGGG---GCUAG Ubap1 mmu-miR-17-3p 501 518 AUGUUCACGGGAGUGACGUCA- :||||:|: ||||:|| --GGAGUGUCU---CUGCGGUA Ubap1 mmu-miR-18 508 533 AUAGACGUGA----UCUACGUGGAAU |||||: | ||||||||:|| -CUCUGCGGUACAAAGAUGCACUUUU Ubap1 mmu-miR-185 373 396 -CUUGAC---GGAAA-GAGAGGU |::|| ||||| |||||| GGGGCUAGAUCCUUUCCUCUCCU Ubap1 mmu-miR-193 101 121 GACCCUGAAACAUCCGGUCAA ||||: || | |||:|:| UUGGGGGUUAGAAGGUCGGA- Ubap1 mmu-miR-199a* 346 367 UUGGUUA--CACGUCUGAUGACAU ||: | |||||||:||| --ACAGGAGGAGCAGACUGCUGC- Ubap1 mmu-miR-199b 474 498 CUUGUCC--AUCAGAUUUGUGACCC :|||| |||| | ||||||| CGACAGCCCUAGUGUU-ACACUGGU Ubap1 mmu-miR-19a 659 695 -AGUCAAAACGU------AUCUAAA-----CGUGU- ||||||||| |:| ||||| GUCAGUUUUGAGUAUCAUUGGCCCUUUCCAGCACAU Ubap1 mmu-miR-19b 659 695 -AGUCAAAACGU------ACCUAAA-----CGUGU- ||||||||| ||| ||||| GUCAGUUUUGAGUAUCAUUGGCCCUUUCCAGCACAU Ubap1 mmu-miR-207 335 358 CUCCCUC-CUC-UCGGUCCUCUUCG- ||| |:| || ||||||:||| ---AGAGUGGGAAGACAGGAGGAGCA Ubap1 mmu-miR-20b 225 261 -AUGGACGUGAUACUC------------GUGAAAC- ||||||:::| |||| ||||||| AUACCUGUGUUUUGAGAAGUGUCCUUCCCACUUUGG Ubap1 mmu-miR-210 15 34 AGUCGGCGACAGUGUGCGUGUC |:||| ||| |||| |||| ACGGCC-CUGCCACA-GCACC- Ubap1 mmu-miR-217 560 581 UAGGUCAGUCAAGGACU-ACGUCAU |||| ||||||| ||| -GCCAGGCAGUUCCCAUUUGCC--- Ubap1 mmu-miR-22 545 572 UGUCA-----AGAAGUUGA-CCGUCGAA ||| ||||| :| |||||:| -AAGUCUGCCUCUUCUGCCAGGCAGUUC Ubap1 mmu-miR-24 394 425 GACAAG-GACGAC-----------UUGACUCGGU || |||||| :||||:||: ---CUCUCUGCUGCACCACUGUCAGACUGGGCUC Ubap1 mmu-miR-25 411 442 -AGUCUGGCUCU-------GUUCACGUUAC- ||||||:|:| |||||| |||| GUCAGACUGGGCUCUAACCCAAGUGGAAUGC Ubap1 mmu-miR-27a 627 650 CGCCUUGAA---UCGGUGACACUU |||::| |||| ||||| CCGGGGCAUUGGAGCCCCUGUGC- Ubap1 mmu-miR-27b 627 650 CGUCUUGAA---UCGGUGACACUU |:|::| |||| ||||| CCGGGGCAUUGGAGCCCCUGUGC- Ubap1 mmu-miR-291b-3p 511 533 CUGUU-UGUUUUACCUACGUGAAA- :|:: ||||| |||||||||| UGCGGUACAAA---GAUGCACUUUU Ubap1 mmu-miR-292-3p 308 331 UGUGAGUUUUGGACCG--CCG-UGAA :| ||||||||||| ||| || -AGC-CAAAACCUGGCCUGGCUACC- Ubap1 mmu-miR-292-5p 632 673 -GUUUUCUCGGGGG-----UC------------AAACUCA || :|||||||: || ||||||| GCAUUGGAGCCCCUGUGCUAGGAAGCUGUCAGUUUUGAGUA Ubap1 mmu-miR-293 489 520 -UGUGAUGUUU--------GAGACGCCGUGA |||||: ||||||||:|| UACACUGGUUCUGGAGUGUCUCUGCGGUACA Ubap1 mmu-miR-296 431 467 -UGUCCUA------ACUC-CCC-------CCCGGGA | ||| |||| ||| |||||| AAGUGGAAUGCAACUGAGAGGGUCUUCCUGGGCCCG Ubap1 mmu-miR-298 745 765 CCUUCUUGUCGGGAGGAGA-CGG- |||||| ||||||| ||| ---UGAACAG-CCUCCUCCAGCCC Ubap1 mmu-miR-29a 404 425 UUGGCUAAAGUCU-ACCACGAU ||| ||||| ||| ||| CACCACUGUCAGACUGG-GCUC Ubap1 mmu-miR-301 474 497 CGAAACUGUU---AUGAUAACGUGAC- ||||: || |:|| ||||| ----CGACAGCCCUAGUGUUACACUGG Ubap1 mmu-miR-320 750 772 AAGCGGGAGA-GUUGGGUCGAAAA |||: || ||:||| ||||| --AGCCUCCUCCAGCCCUGCUUUA Ubap1 mmu-miR-324-3p 616 640 -GGU--CGUCGUGGACCCCGUCACC- || || || || |||||| ||| UCCUCUGCUGC-CC-GGGGCAUUGGA Ubap1 mmu-miR-328 345 382 -UGCCUUCC-CGUCUC------------UCCCGGUC- || |:||| ||||| :||||:|| GACAGGAGGAGCAGACUGCUGCUGUUUUGGGGCUAGA Ubap1 mmu-miR-330 617 652 AGAGACG-----UCC----------GGGACACGAAACG |||||| :|| ||||||||| CCUCUGCUGCCCGGGGCAUUGGAGCCCCUGUGCUA--- Ubap1 mmu-miR-331 143 172 AAGAUCCUA---UCCGGG-----UCCCCG |||: || |||||: :|||| CUCUGUGAGCCCAGGCCUGAGCUGGGGGA Ubap1 mmu-miR-338 473 505 AGUUGUU----UUA----GUGACUACGACCU- |:|||: |:| |||||:| ||||| CCGACAGCCCUAGUGUUACACUGGUUCUGGAG Ubap1 mmu-miR-340 419 454 -CCGAUAUU----UCAU-------UGACUCUGCCU |||| ||| |||: ||||||| || GGGCUCUAACCCAAGUGGAAUGCAACUGAGAGGGU Ubap1 mmu-miR-344 345 385 -UGUCA-----GUC---CGAAA--------CCGAUCUAGU |||| ||| ||| ||||||||| GACAGGAGGAGCAGACUGCUGCUGUUUUGGGGCUAGAUCC Ubap1 mmu-miR-346 45 81 -UCUCCGUC-CGUG----------AGCCCGUCUGU- :||||| |||| | ||| ||||: AGGAGGCUCUGCACAGCUCACUUGUGGGGAAGACGG Ubap1 mmu-miR-34c 5 27 CGUUAGUCGAU-UGAUGU---GACGGA :|| :||||: ||||| -----UGGCCCUGCUACGGCCCUGCCA Ubap1 mmu-miR-365 628 639 UAUUCCUAAAAAUCCCCGUAAU- ||||||||: ------------CGGGGCAUUGG Ubap1 mmu-miR-374-5p 813 836 GUGAAUCGUCCAA-CAUAAUAUA- :||:|: ||| |||||||:| -CUUUGGUUUGUUUGUAUUAUGUU Ubap1 mmu-miR-376a 499 518 UGCACCUAAAAGGAGAUGCUA- |||| :||||:||:| --CUGGAGUG-UCUCUGCGGUA Ubap1 mmu-miR-376b 121 152 UUUCACCU---------ACAA--GGAGAUACUA ||||| |||| :||||:||| --UGUGGAGUUGACACUUGUUAGUCUCUGUGAG Ubap1 mmu-miR-379 276 314 GGAUGCAAGGUA----UCAGA------------UGGU- || ||||: :|||| :||| ACUUGGUUCUUUCUGGGGUCUCUAAUGUUCUCAGCCAA Ubap1 mmu-miR-412 322 357 UGCCGA---------UCACCUG---GUCCACUUCA :|||| |||||: |||| |:|| CUGGCUACCAAGAAGAGUGGGAAGACAGGAGGAGC Ubap1 mmu-miR-423 443 465 -GACUC-CCCGGAGUCUGGCUCGA ||||| |||:||: |:|:|| ACUGAGAGGGUCUUC--CUGGGCC Ubap1 mmu-miR-424 328 370 AGGUU------------UUGUA---CUUA----ACGACGAC |||| :||| ||: |||||||| ACCAAGAAGAGUGGGAAGACAGGAGGAGCAGACUGCUGCUGU Ubap1 mmu-miR-425 71 97 -CCGCCUGUGCUGUA---AGGGCUA- || |||: ||||| ||| ||| GGGAAGACGGGACAUGCUUCCAGAUU Ubap1 mmu-miR-449 8 28 UGGUCGAUUGUUAUGUGACGGU- || ||| ||: :| |||||| CCCUGCU-ACG--GCCCUGCCAC Ubap1 mmu-miR-449b 3 27 -GGUCGAU-CG-UUACGUGACGGA |::|| || | || ||||| CCUGGCCCUGCUACGGCCCUGCCA Ubap1 mmu-miR-455-5p 173 196 GCUACAUCAGGUU---UCCGUGUAU- |||| :| :||||:||| ---AGUAGGAAGAUUUGGGCAUAUAU Ubap1 mmu-miR-464 261 284 AUAGAGUGUCUUAUU--UGAACCAU ||: ||||| ||||||| --GCUUUCAGAAGGAAUACUUGGUU Ubap1 mmu-miR-469 323 355 -CCUGUGGUUCUAGUUACU------UUCUCCGU || :||||||| |:||: |:|||| UGGCUACCAAGAAGAGUGGGAAGACAGGAGGA- Ubap1 mmu-miR-483 329 357 UGUUCU----GCCCUCC---CCUCCUCACU ||||| :|||| ||||||| CCAAGAAGAGUGGGAAGACAGGAGGAGC-- Ubap1 mmu-miR-484 444 466 UAGCCCUCCCCU---GACUCGGACU :| ||||| |||:||| -CUGAGAGGGUCUUCCUGGGCCC-- Ubap1 mmu-miR-486 627 656 GAGCCCCG-----UCGA-GUCAUG-UCCU- |||||| ||| | ||:| |||| -CCGGGGCAUUGGAGCCCCUGUGCUAGGAA Ubap1 mmu-miR-491 428 469 -GGAGUACCU-----------UCCCA--AG-----GGGUGA || :|||| ||||| || |||:| CCCAAGUGGAAUGCAACUGAGAGGGUCUUCCUGGGCCCGCC Ubap1 mmu-miR-497 345 370 AUGUUUGG--UGUCACACGACGAC- |||:: :||| |||||||| GACAGGAGGAGCAGACUGCUGCUGU Ubap1 mmu-miR-500 613 637 GACUUGGGA----ACGGGUCCACGUA- ||:||| |||||:|| |||| --UAAUCCUCUGCUGCCCGGG-GCAUU Ubap1 mmu-miR-501* 613 638 GUUUAGGA----ACGGGCCCACGUAA- |||||| |||||||| ||||| -UAAUCCUCUGCUGCCCGGG-GCAUUG Ubap1 mmu-miR-503 354 381 -CGUC-----AUGACAAGGGCGACGAU- |||| |:|||||:: | |||| AGCAGACUGCUGCUGUUUUGGG-GCUAG Ubap1 mmu-miR-505 109 134 -UCUUUUGGUCGU--UCACAACUGC |||| :|:| :| |||||| UAGAAGGUCGGAUGUGGAGUUGACA Ubap1 mmu-miR-541 620 647 -AC-ACUGGU--UGUAGUCUUAGGGAA || || ||: :|||::||: |||| CUGCUGCCCGGGGCAUUGGAGCCCCUG Ubap1 mmu-miR-542-3p 705 725 AAAGUCAAUAGUUAGACAGUGU ||| |:| :|||||| --ACAGGCCACGACUUGUCACU Ubap1 mmu-miR-542-5p 432 464 GCAC----UGU--ACUA--CUAG--GGGCUC- ||| :|| ||| |:|| ||:|:| AGUGGAAUGCAACUGAGAGGGUCUUCCUGGGC Ubap1 mmu-miR-546 318 333 -CUGAGGCACGGUGGUA |:| |:| ||:|||| UGGC-CUG-GCUACCAA Ubap1 mmu-miR-615 445 468 -UUCUCCCUCU-GGGUCCGAGCCU :|||||| ||::||| || UGAGAGGGUCUUCCUGGGCCCGC- Ubap1 mmu-miR-665 289 322 AUUCCCU---------GGAGUCGGA---GGACCA :||| :||||||| ||||| -UGGGGUCUCUAAUGUUCUCAGCCAAAACCUGGC Ubap1 mmu-miR-667 629 664 GAACCCG--ACC-------CACCGUCC----ACAGU- |||| ||| ||| :||| ||||| --GGGGCAUUGGAGCCCCUGUGCUAGGAAGCUGUCAG Ubap1 mmu-miR-668 105 135 -CC-AUCACCCGGCU--CGGCUCA-CUGU- || ||| ||:||: |: |||| |||| GGGUUAGAAGGUCGGAUGUGGAGUUGACAC Ubap1 mmu-miR-671 754 775 -GGAGGUCGGG--GAGGUCCCGAAGGA |||||||||| ||::||| UCCUCCAGCCCUGCUUUAGGA------ Ubap1 mmu-miR-672 793 815 -GUGUGUGUCAUGUGGUUGGAGU :| :||:|| ||||::||| CUAGGCAUAGAA-ACCAGUCUCU Ubap1 mmu-miR-673 151 171 GAGGUUCCUGGUCUCGACACUC- || ||| || |||||| |:| -GCCCAGG-CCUGAGCUG-GGGG Ubap1 mmu-miR-674* 155 177 AACAAGACUCUACCCUCGA-CAC | ||||| ||||:| || -AGGCCUGAGCUGGGGGAAAGUA Ubap1 mmu-miR-675-5p 364 410 -UGACA----CCCG-----GGAAAGG-------------CGUGGU :|||| |||| ||||||| |||||| UGCUGUUUUGGGGCUAGAUCCUUUCCUCUCCUCUCUGCUGCACCAC Ubap1 mmu-miR-676 738 778 -UCGAG---UUGUUGGAG---------------UCCUGCC ||:|| ||||:|||| ||||:| CAGUUCUUGAACAGCCUCCUCCAGCCCUGCUUUAGGAUGA Ubap1 mmu-miR-676* 104 130 CGUUCAGGAUUCCA----ACAUCUCA- ::||: ||||| |||:|||| -GGGGUUAGAAGGUCGGAUGUGGAGUU Ubap1 mmu-miR-680 640 684 -GGGGGU-----------ACAGUCGU--CUA--------CGGG ||||:: ||||||: || |||| GCCCCUGUGCUAGGAAGCUGUCAGUUUUGAGUAUCAUUGGCCCU Ubap1 mmu-miR-681 399 425 UCGACG----GACGGUC-GCUCCGAC ||||| |||:||| | :|||| UGCUGCACCACUGUCAGACUGGGCUC Ubap1 mmu-miR-683 46 74 -CUCC----UGUGUCGAAUGU-CGUCC- |||| :||||||| || |::|| GGAGGCUCUGCACAGCUCACUUGUGGGG Ubap1 mmu-miR-684 63 80 AACUGAACUUCCCUUUUGA ||||| :|||||:|| --CACUUGUGGGGAAGACG Ubap1 mmu-miR-689 150 172 CCUGGGG-CGG-CUCG-CCCCUGC :||| ||| |||| ||||: -AGCCCAGGCCUGAGCUGGGGGA- Ubap1 mmu-miR-693-3p 634 662 -AAUGUCGGUGUA--GA-CUUUCGACG- ||: |||| | || |:||||||: AUUGGAGCCCCUGUGCUAGGAAGCUGUC Ubap1 mmu-miR-693-5p 110 132 -CUUUUGAAAGCCUACACCG--AC- |||:: |||||||||| || AGAAGG---UCGGAUGUGGAGUUGA Ubap1 mmu-miR-697 752 778 AGAGGU-GUCC---UGG--UCCUACAA |||| ||| :|: |||||| CCUCCUCCAGCCCUGCUUUAGGAUGA- Ubap1 mmu-miR-699 539 564 GCUCGGUCCAG-CGU----GACGGA |:|| ||| || ||||| GGGGCAAAGUCUGCCUCUUCUGCCA Ubap1 mmu-miR-702 160 192 -CUCG-CCCCAUUUC--CC------ACCCGU- |||| |||| |||| || |||||| UGAGCUGGGGGAAAGUAGGAAGAUUUGGGCAU Ubap1 mmu-miR-705 6 38 ACGGG-------UGGGGUGGA---G-GGUGG- |||| :|||::|| | ||||| GGCCCUGCUACGGCCCUGCCACAGCACCACCA Ubap1 mmu-miR-707 67 90 GCAUCCGUUC-GCC--GUACUGAC ||:|| ||| ||| |||| || UGUGGGGAAGACGGGACAUG-CUU Ubap1 mmu-miR-709 753 772 -AGGAGGACGGAGACGGAGG |||||| ||| ||||:|: CUCCUCCAGCC-CUGCUUUA Ubap1 mmu-miR-711 452 467 GAAUGUAGAGAGGGGCCCAGGG- |||:||:||| ||| -------GUCUUCCUGGG-CCCG Ubap1 mmu-miR-744 4 26 CGACAAUCGGGA-----UCGGGGCGU |:||||| :||||:|| ----CUGGCCCUGCUACGGCCCUGCC Ubap1 mmu-miR-761 337 368 ACACA-----GUCAAAG-UGG--GACGACG- ||| ||| :| ||||||| AGUGGGAAGACAGGAGGAGCAGACUGCUGCU Ubap1 mmu-miR-762 2 24 CGAGACAGGGCCGGGG-----UCGGGG- ||:|||||: :||||: ------ACCUGGCCCUGCUACGGCCCUG Ubap1 mmu-miR-763 672 698 CGGUGACCAAGAAGGGUCG---ACC- :||:||| |||:||||| ||| AUCAUUGGCCCUUUCCAGCACAUGGG Ubap1 mmu-miR-764-5p 123 156 UCCUC--CUGU------------ACACUCGUGG- |||| |||| ||||||| || UGGAGUUGACACUUGUUAGUCUCUGUGAGC-CCA Ubap1 mmu-miR-770-3p 685 716 -GGUCGAGGUGCA---------GUCCGGGUGC- ||||| ||:| |||| ||||| UCCAGCA-CAUGGGUGAGAAAACAGG-CCACGA Ubap1 mmu-miR-804 41 67 AGGUCCACUCCU-----UGUUGAGUGU ||| | |||| |||:||||| CCCAAG-GAGGCUCUGCACAGCUCACU Ubap1 mmu-miR-106b 525 532 U-------AGACGUGACAGU---------------CGUGAAAU |||| | |||| ||||||| ACACUGGUUCUGGAGUGUCUCUGCGGUACAAAGAUGCACUUUU Ubap1 mmu-miR-132 589 596 GC----UGGUACCG----------------ACA--UCUGACAAU :||| ||| ||| |||||||| UCUUCUGCCA-GGCAGUUCCCAUUUGCCCCUGUCCAGACUGUUU Ubap1 mmu-miR-15a 361 368 G----------------------------UGUUUGGUAAUACACGACGAU :||:|| |||||||: CUACCAAGAAGAGUGGGAAGACAGGAGGAGCAGAC-------UGCUGCUGU Ubap1 mmu-miR-17-5p 525 532 U-------------------GAUGGACGUGACAUU-CGUGAAAC ||:| |:|| ||||||| ACACUGGUUCUGGAGUGUCUCUGCG-GUACAAAGAUGCACUUUU Ubap1 mmu-miR-199a 490 497 C-------------------UUGUCC--AUCAGACUUGUGACCC :|||| |||| | ||||||| UUCCUGGGCCCGCCUUCCCCGACAGCCCUAGUGUU-ACACUGGU Ubap1 mmu-miR-199b 490 497 C-------------------UUGUCC--AUCAGAUUUGUGACCC :|||| |||| | ||||||| UUCCUGGGCCCGCCUUCCCCGACAGCCCUAGUGUU-ACACUGGU Ubap1 mmu-miR-20a 525 532 --------------------GAUGGACGUGAUAUU-CGUGAAAU ||:| |:|| ||||||| ACACUGGUUCUGGAGUGUCUCUGCG-GUACAAAGAUGCACUUUU Ubap1 mmu-miR-20b 525 532 AU-----------------GGACGUGAUA---CU-CGUGAAAC :||||: || || ||||||| ACACUGGUUCUGGAGUGUCUCUGCGGUACAAAGAUGCACUUUU Ubap1 mmu-miR-212 589 596 C-----------------------CGGCACUGACC--UCUGACAAU ||| ||| |||||||| UCUUCUGCCAGGCAGUUCCCAUUUGCCC---CUGUCCAGACUGUUU Ubap1 mmu-miR-291b-3p 524 531 C----------------------UGUU-UGUUUUACCUACGUGAAA :|:: ||||| |||||||||| UACACUGGUUCUGGAGUGUCUCUGCGGUACAAA---GAUGCACUUUU Ubap1 mmu-miR-298 617 624 CCU-----------------UCUUGUC-GGG---AGGAGACGG :| :|| || ||||||||: CUGUCCAGACUGUUUCUUUUGGCUUAGACCAUAAUCCUCUGCUG Ubap1 mmu-miR-344 377 384 ----UGUCAGUC-CGAAA---------------CCGAUCUAGU |||| :| || ||||||||| GAAGACAGGAGGAGCAGACUGCUGCUGUUUUGGGGCUAGAUCC Ubap1 mmu-miR-365 630 637 UAUUCCUAAAAAU---------------------CCCCGUAAU ||||||||: UUCUUUUGGCUUAGACCAUAAUCCUCUGCUGCCCGGGGCAUUGG Ubap1 mmu-miR-424 361 368 A--GGUUUUG--UACUUA-----------------ACGACGAC ||||:| :||:: |||||||| CUACCAAGAAGAGUGGGAAGACAGGAGGAGCAGACUGCUGCUGU Ubap1 mmu-miR-464 276 283 AUA------------------GAGUGUCUUAUU--UGAACCAU ||: ||||| ||||||| AAGUGUCCUUCCCACUUUGGGCUUUCAGAAGGAAUACUUGGUU Ubap1 mmu-miR-485-5p 749 756 C------------------------UUAAGUAGUGCCGGUCGGAGA |:||| :| ||||||| GACUUGUCACUCAGCACUAACCCCCAGUUCU---UGAACAGCCUCC Ubap1 mmu-miR-497 361 368 A-------------------UGUUUGG--UGUCACACGACGAC |||:: :||| |||||||| CUACCAAGAAGAGUGGGAAGACAGGAGGAGCAGACUGCUGCUGU Ubap1 mmu-miR-501 860 867 AAAG---------------------UGGGUCCCUGUUUCCUAA |:|:| ||||||||| UGUAUUAUGUUCUACAAUAUUAAAGAUCUAAAUACAAAGGAUA Ubap1 mmu-miR-542-5p 470 477 ------------------------GCACUGUACUACUAGGGGCUC :| |:| ||||||| GGAAUGCAACUGAGAGGGUCUUCCUG-GGCCCGCCU-UCCCCGAC Ubap1 mmu-miR-7 452 459 ------------------------GUUG-UUUUAGUGAUCAGAAGGU |||| :|:| :||||||| CUGGGCUCUAACCCAAGUGGAAUGCAACUGAGAG----GGUCUUCCU Ubap1 mmu-miR-709 549 556 ------------------AGGAGGA---CGG---AGACGGAGG ||:|| || ||||||||: GGUACAAAGAUGCACUUUUCUUCAUGGGGCAAAGUCUGCCUCUU Ubap1 mmu-miR-762 758 765 -----------------CGAGACA-----GGGCCGGGGUCGGGG |:||| ||: |:|||||||: CUCAGCACUAACCCCCAGUUCUUGAACAGCCUC-CUCCAGCCCUG Ubap1 mmu-miR-93 525 532 --------------------GAUGGACGUGCUUGU-CGUGAAAC ||:| |:|| || | ||||||| ACACUGGUUCUGGAGUGUCUCUGCG-GUACAAAGAUGCACUUUU Ubap1 mmu-let-7a 9 28 uGAU-AUGUUGGAUGAUGGAGU ||: |||::|| ||:|| || cCTGCTACGGCC--CTGCCACA Ubap1 mmu-let-7d 537 556 ugauaCGUUGGAUGAUGGAGA |||| | ||:||||| atgggGCAAAGT-CTGCCTCT Ubap1 mmu-miR-100 491 518 GUGUUCAAG-CCU-----AGAUGCCcaa ||| :|||| ||| |||:||| CACTGGTTCTGGAGTGTCTCTGCGGtac Ubap1 mmu-miR-106a 714 734 aUGGAC-GUGACAAUCGUGAaac ||:|| ||| | |||||| gACTTGTCAC--TCAGCACTaac Ubap1 mmu-miR-106b 508 532 uAGACGUGACA-GU-----CGUGAAAu |||||: || || ||||||| cTCTGCG--GTACAAAGATGCACTTTt Ubap1 mmu-miR-126-3p 501 520 CGUAAUAAUGAG-UGCCAUGcu | | |:| ||| :|||||| GGAGTGT--CTCTGCGGTACaa Ubap1 mmu-miR-132 569 596 gcuGGU--AC--CGACA--UCUGACAAu ||| || |||| |||||||| ttcCCATTTGCCCCTGTCCAGACTGTTt Ubap1 mmu-miR-133a 57 86 UGUCG-----AC-CAACUUC--CCCUGguu ||||| || | |||| ||||| ACAGCTCACTTGTGGGGAAGACGGGACatg Ubap1 mmu-miR-134 393 416 GGGGAGACCA-GUUG-GUCAGUgu ||:||||| | || | | |||| CCTCTCTGCTGCACCACTGTCAga Ubap1 mmu-miR-135a 689 714 aGUGUAUC--CUUAUUU-UUCGGUau |||||:| ||: ||| |:|||| gCACATGGGTGAGAAAACAGGCCAcg Ubap1 mmu-miR-135b 690 714 GUGUAUCCUUACUU---UUCGGUau |||||:|| : ||| |:|||| CACATGGGTGAGAAAACAGGCCAcg Ubap1 mmu-miR-138 21 37 cuaaGUGUUGUGGUCGa ||||:||||| | ctgcCACAGCACCACCa Ubap1 mmu-miR-140* 490 517 aggcACCAAGAU------GGGACACCAU |||||||: |:||| |||| acacTGGTTCTGGAGTGTCTCTGCGGTA Ubap1 mmu-miR-143 373 394 aCUCGAUGUCACGAAGUAGAGu |:|||| | :||| |||| gGGGCTAGATCCTTTCCTCTCc Ubap1 mmu-miR-152 428 447 GGGUUCAAGACAGUACG-UGACU |||||| || |||| ||||| CCCAAG---TGGAATGCAACTGA Ubap1 mmu-miR-15a 347 368 guguuugguaauacACGACGAu ||||||| caggaggagcagacTGCTGCTg Ubap1 mmu-miR-15b 604 628 acAUUUGGUACU---ACACGACGau ||:||||| | | |||||| ctTAGACCATAATCCTCTGCTGCcc Ubap1 mmu-miR-17-3p 499 516 auguUCACGGGAGUGACGUCA ||||:|: ||||:|| ctggAGTGTCT---CTGCGGT Ubap1 mmu-miR-17-5p 505 532 ugAUGGACGUGACAUU----CGUGAAAc | :||||: | || ||||||| tgTCTCTGCGGTACAAAGATGCACTTTt Ubap1 mmu-miR-18 507 532 AUAGACG---UG-AUCUACGUGGAAu | ||||| || ||||||||:|| TCTCTGCGGTACAAAGATGCACTTTt Ubap1 mmu-miR-185 374 395 CUUGA-C--GGAAA-GAGAGGu |::|| | ||||| |||||| GGGCTAGATCCTTTCCTCTCCt Ubap1 mmu-miR-190 209 230 uGGAUUAUAUAGUUUGUAUAGu ||| ||||:||||||| | tCCTTCCATATTAAACATACCt Ubap1 mmu-miR-193 101 121 gACCCUGAAACAUCCGGUCaa ||||: || | |||:|:| tTGGGGGTTAGAAGGTCGGat Ubap1 mmu-miR-199a 474 497 cuUGUC--CAUCAGACUUGUGACCc |||| |||| | ||||||| cgACAGCCCTAGTGT-TACACTGGt Ubap1 mmu-miR-199a* 344 370 UUGGU--UACACGUCU---GAUGACAu |: || | | ||||| ||:|||| AGACAGGAGGAGCAGACTGCTGCTGTt Ubap1 mmu-miR-199b 474 497 cuUGUC--CAUCAGAUUUGUGACCc |||| |||| | ||||||| cgACAGCCCTAGTGT-TACACTGGt Ubap1 mmu-miR-19a 660 693 AGUCAAAAC-----GUAUCU---AAA---CGUGU ||||||||| ||| |: ||| ||||| TCAGTTTTGAGTATCATTGGCCCTTTCCAGCACA Ubap1 mmu-miR-19b 660 693 AGUCAAAAC-----GU-ACC--UAAA---CGUGU ||||||||| || ||| ||| ||||| TCAGTTTTGAGTATCATTGGCCCTTTCCAGCACA Ubap1 mmu-miR-207 334 356 cUCCCUCCUCUCGGUCCUCUUCG || | ||: || ||||||:||| aAGAGTGGGAAGACAGGAGGAGC Ubap1 mmu-miR-20a 506 532 gAUGGACGUGAUAUU----CGUGAAAu | :||||: || || ||||||| gTCTCTGCGGTACAAAGATGCACTTTt Ubap1 mmu-miR-20b 507 532 AUGGACG---UGAUACU-CGUGAAAc | :|||| || | || ||||||| TCTCTGCGGTACAAAGATGCACTTTt Ubap1 mmu-miR-20b 226 259 AUGGACGUGAUACU------------CGUGAAAC ||||||:::| ||| ||||||| TACCTGTGTTTTGAGAAGTGTCCTTCCCACTTTG Ubap1 mmu-miR-210 15 34 aGUCGGCGACAGUGUG-CGUGuc |:||| ||| | ||| |||| aCGGCC-CTG-C-CACAGCACca Ubap1 mmu-miR-212 578 596 CCGGCACUGACCUCUGACAAu | || || | |||||||| GCCCCTGTC--CAGACTGTTt Ubap1 mmu-miR-217 542 570 uaggUCAGUC--A-AGGAC--UACGUCAu |||| | | |:||| | ||||| gcaaAGTCTGCCTCTTCTGCCAGGCAGTt Ubap1 mmu-miR-22 549 571 ugucaAGAAG-UUGACCGUCGAa ||||| : | |||||:| ctgccTCTTCTGCCAGGCAGTTc Ubap1 mmu-miR-24 401 424 GACAAG--GACGACUUGACUCGgu ||| | |||: :||||:|| CTGCACCACTGTCAGACTGGGCtc Ubap1 mmu-miR-25 412 440 AGUCUGGCUC-----U--GUUCACGUUAC ||||||:|:| | |||||| |||| TCAGACTGGGCTCTAACCCAAGTGGAATG Ubap1 mmu-miR-27a 627 650 cGCCUUG-AA--UCGGUGACACuu |||::| || |||| ||||| cCGGGGCATTGGAGCCCCTGTGct Ubap1 mmu-miR-27b 627 650 cGUCUUG-AA--UCGGUGACACuu |:|::| || |||| ||||| cCGGGGCATTGGAGCCCCTGTGct Ubap1 mmu-miR-291b-3p 512 531 cuguuUGUUUUACCUACGUGAAA ||||| |||||||||| gcggtACAAA---GATGCACTTT Ubap1 mmu-miR-292-3p 306 331 uGUGAGUUUUGGACC--GCCG-UGaa || |||||||||| :||| || tCAGCCAAAACCTGGCCTGGCTACca Ubap1 mmu-miR-292-5p 649 671 GUUUUCUCGGGGGUC-AAACUCA | |:: |||: :||| ||||||| CTAGGAAGCTGTCAGTTTTGAGT Ubap1 mmu-miR-293 498 519 ugugauguuuGAGACGCCGUGa ||||||||:|| tctggagtgtCTCTGCGGTACa Ubap1 mmu-miR-296 446 466 uguccuaacuccccCCCGGGa |||||| gagagggtcttcctGGGCCCg Ubap1 mmu-miR-298 604 624 ccuUCUUGUCGGGAGGAGACGg ||| || : |||||||| cttAGACCA-TAATCCTCTGCt Ubap1 mmu-miR-298 742 763 ccuuCUUGUCGGGAGGA-GACGG |||||| |||||| | ||| tcttGAACAG-CCTCCTCCAGCC Ubap1 mmu-miR-301 466 495 CGAAA----CUGUU---AUGAUAACGUGAC || || ||||: || |:|| ||||| GCCTTCCCCGACAGCCCTAGTGTTACACTG Ubap1 mmu-miR-320 748 771 aagCGGGAGA-GUUGGGUCGAAAa |||: || ||:||| ||||| acaGCCTCCTCCAGCCCTGCTTTa Ubap1 mmu-miR-324-3p 619 638 gGUCGUCGUGGACCCCGUCACC | || || || |||||| ||| tCTGCTGC-CC-GGGGCATTGG Ubap1 mmu-miR-328 346 380 UG-CCUUCCCGUCU--------C----UCCCGGUC || |||:| ||||| | :||||:|| ACAGGAGGAGCAGACTGCTGCTGTTTTGGGGCTAG Ubap1 mmu-miR-338 481 503 aguuguuuuaGUGACUACGACCU |||||:| ||||| cctagtgttaCACTGGTTCTGGA Ubap1 mmu-miR-340 420 453 CCGAUAU----UUCA-------UUGACUCUGCCu |||| || |||| |||||||| || GGCTCTAACCCAAGTGGAATGCAACTGAGAGGGt Ubap1 mmu-miR-344 355 384 uGUCAGUC-----CGAAA--CCGAUCUAGu ||| | | |:||| ||||||||| gCAGACTGCTGCTGTTTTGGGGCTAGATCc Ubap1 mmu-miR-346 46 79 uCUCC-------GUC-CGUGAG---CCCGUCUGu |||| ||| ||||: ||| |||| gGAGGCTCTGCACAGCTCACTTGTGGGGAAGACg Ubap1 mmu-miR-365 616 637 uauuccuaaaaauCCCCGUAAu |||||||| tcctctgctgcccGGGGCATTg Ubap1 mmu-miR-374-5p 811 834 GUGAAUC--GUCCAACAUAAUAUA | ||| | : | |||||||||:| CTCTTTGGTTTGTTTGTATTATGT Ubap1 mmu-miR-376a 497 516 ugcACCUAAAAGGAGAUGCUA |||| | | ||||:||:| ttcTGGAGTGT-CTCTGCGGT Ubap1 mmu-miR-376b 124 151 uuUCACCU----ACAA--GGAGAUACUa ||| || |||| :||||:||| ggAGTTGACACTTGTTAGTCTCTGTGAg Ubap1 mmu-miR-379 312 331 ggaUGCAAGGUAUCAGAUGGU || | | | | |||||| aaaACCTGGCCT-GGCTACCA Ubap1 mmu-miR-412 331 356 ugccgaUCACC---UGGUCCACUUCa ||||| : |||| |:|| aagaagAGTGGGAAGACAGGAGGAGc Ubap1 mmu-miR-423 444 464 GACUC-CCCGGAGUCUGGCUCGa ||||| |||:||: |:|:|| CTGAGAGGGTCTTC--CTGGGCc Ubap1 mmu-miR-424 340 368 aggUUUUGUACU-------UAACGACGAC ||:||| || | |||||||| gggAAGACAGGAGGAGCAGACTGCTGCTG Ubap1 mmu-miR-425 72 95 CCGCCUGUGCUGU---AAGGGCUA || |||: |||| |||| ||| GGAAGACGGGACATGCTTCCAGAT Ubap1 mmu-miR-449b 9 26 GGUCGAUCGUUACGUGACGGa || |||| |: || ||||| CCTGCTA-CG--GCCCTGCCa Ubap1 mmu-miR-455-5p 170 194 gcUACAUCAGGUU---UCCGUGUAU | |||| :| :||||:||| gaAAGTAGGAAGATTTGGGCATATA Ubap1 mmu-miR-464 259 283 auaGAGUGUCUUAUU--UGAACCAu ||: ||||| :| ||||||| gggCTTTCAGAAGGAATACTTGGTt Ubap1 mmu-miR-469 324 355 CCUGUGGUUCUAGUUACU------UUCUCCgu || :||||||| |:||: |:|||| GGCTACCAAGAAGAGTGGGAAGACAGGAGGag Ubap1 mmu-miR-483 332 358 UGUUCU-GCCCUCC---CCUCCUCacu | |||| :|||| | ||||||| AGAAGAGTGGGAAGACAGGAGGAGcag Ubap1 mmu-miR-484 443 467 UAGCCCUCCC---CUGACUCGGACu | :| ||||| |||:||| | ACTGAGAGGGTCTTCCTGGGCCCGc Ubap1 mmu-miR-485-5p 735 756 cuuaaguAGUGCCGGUCGGAGa || :| ||||||| ccccagtTCTTGAACAGCCTCc Ubap1 mmu-miR-486 626 654 GAGCCCCG-----UC-GAGUCAUG-UCCU | |||||| || | | ||:| |||| CCCGGGGCATTGGAGCCCCTGTGCTAGGA Ubap1 mmu-miR-491 454 478 GGAGUACCU--UCCCAAGGGG-UGa |:|| |||: | |||||| || CTTCCTGGGCCCGCCTTCCCCGACa Ubap1 mmu-miR-497 345 368 aUGU--UUGGUGUCACACGACGAC ||| |: :||| |||||||| gACAGGAGGAGCAGACTGCTGCTG Ubap1 mmu-miR-500 611 635 gacUUGGGA-ACG--GGUCCACGUA ||:||| ||| || || |||| catAATCCTCTGCTGCCCGGGGCAT Ubap1 mmu-miR-501 846 867 aaagUGGGUCCCUGUUUCCUAa |:|:| ||||||||| aaagATCTAAATACAAAGGATa Ubap1 mmu-miR-501* 611 636 GU-UUAGGA-ACG--GGCCCACGUAA || |||||| ||| || || ||||| CATAATCCTCTGCTGCCCGGGGCATT Ubap1 mmu-miR-503 350 368 CGUCAUGACAAGGGCGACGAu | :| :| | |:|||||| GAGGAGCAG--ACTGCTGCTg Ubap1 mmu-miR-505 110 133 UCUUUUGGUC--GUUCACAACUGc ||||:::|:| :| |||||| AGAAGGTCGGATGTGGAGTTGACa Ubap1 mmu-miR-541 621 646 AC-ACUGG--UUGUAGUCUUAGGGAa || || || ::|||::||: |||| TGCTGCCCGGGGCATTGGAGCCCCTg Ubap1 mmu-miR-542-3p 703 724 aaaGUCAAUAGUUAGACAGUGu ||| |:| :|||||| aaaCAGGCCACGACTTGTCACt Ubap1 mmu-miR-542-5p 457 477 gcacuguacuacuAGGGGCUc ||||||| cctgggcccgcctTCCCCGAc Ubap1 mmu-miR-546 319 332 CUGAGGCACGGUGGUa |:| |:| ||:|||| GGC-CTG-GCTACCAa Ubap1 mmu-miR-615 446 468 uUCUCCC-UCUGGGUCCGAGCcu |||||| ||::||| || gAGAGGGTCTTCCTGGGCCCGcc Ubap1 mmu-miR-665 298 326 AUUCCCUGGAGUC------GGA--GGACCa ||| | :||||| ||| ||||| TAA-TGTTCTCAGCCAAAACCTGGCCTGGc Ubap1 mmu-miR-665 268 292 aUUCCCUG-GAGUC--GGAGGACCa |||| |: ||::| |:|:|||| gAAGGAATACTTGGTTCTTTCTGGg Ubap1 mmu-miR-667 634 662 gAACC-C---GAC-CCA-CCGUCCACAGU |||| | ||| | | || || ||||| aTTGGAGCCCCTGTGCTAGGAAGCTGTCA Ubap1 mmu-miR-668 106 133 CC-AUCACCCGGCU--CGGCUC-ACUGU || ||| ||:||: |: ||| ||||| GGTTAGAAGGTCGGATGTGGAGTTGACA Ubap1 mmu-miR-671 734 757 GGAGGUCGGGGAGGUCCCGAAGGA || ||||::|:| | || |||| CCCCCAGTTCTTGAACAGCCTCCT Ubap1 mmu-miR-672 790 814 GUG----UGUGUCAUGUGGUUGGAGu ||| :||:|| | ||||::||| CACCTAGGCATAG-AAACCAGTCTCt Ubap1 mmu-miR-673 150 170 gaGGUUCCUGGUCUCGACACUC || ||| || |||||| |:| agCCCAGG-CCTGAGCTGGGGG Ubap1 mmu-miR-674* 139 168 AACA-AGACUCU----ACC---CUCGACac | || |||| || || |||||| TAGTCTCTGTGAGCCCAGGCCTGAGCTGgg Ubap1 mmu-miR-675-5p 386 408 ugacacccGGGA-AAGGCGUGGU |:|| | |:|||||| ttcctctcCTCTCTGCTGCACCA Ubap1 mmu-miR-676 754 777 ucGAGUU---GUUGGAGUCCUGCc ||| | | :|:|:||||:| tcCTCCAGCCCTGCTTTAGGATGa Ubap1 mmu-miR-676* 111 128 CGUUCAGGAUUCCAACAUCUCA | |:||| || |||:|||| GAAGGTC----GGATGTGGAGT Ubap1 mmu-miR-680 641 662 GGGGGUAC-AGUCGUCUACGGg ||||::|| | :| || ||:| CCCCTGTGCTAGGAAGCTGTCa Ubap1 mmu-miR-683 47 64 CUCCUGUGUCGAAUGUCGucc |||| | | || ||||| GAGG-CTCTGC--ACAGCtca Ubap1 mmu-miR-684 61 79 aACUGAACUUCCCUUUUGa | ||||| :|||||:|| cTCACTTGTGGGGAAGACg Ubap1 mmu-miR-689 148 173 cCUGGGG--CGG-CUCG--CCCCUgc || ||| ||| |||| ||||| tGAGCCCAGGCCTGAGCTGGGGGAaa Ubap1 mmu-miR-693-3p 635 660 AAUGUCGGUG-UA-GA-CUUUCGACg ||: |||| | :| || |:|||||| TTGGAGCCCCTGTGCTAGGAAGCTGt Ubap1 mmu-miR-693-5p 111 128 CUUUUGAAAGCCUACACCgac |||:: |||||||||| GAAGG---TCGGATGTGGagt Ubap1 mmu-miR-695 137 159 aAGUCAGUGG-AUACGGGUUAGa |:|||| |: |: |||||: | gTTAGTCTCTGTGAGCCCAGGCc Ubap1 mmu-miR-697 755 778 aGAGGU---GUCCUGGUCCUACaa ||||| | | ::|||||| cCTCCAGCCCTGCTTTAGGATGac Ubap1 mmu-miR-699 561 581 GCUCGGUCCAGCGU-GACGGa | || ||| || || :|||| CCAGGCAGTTCCCATTTGCCc Ubap1 mmu-miR-7 430 459 GUU-GUUUUA-G-UGA-----UCAGAAGGu ||| :::||| | ||| :||||||| CAAGTGGAATGCAACTGAGAGGGTCTTCCt Ubap1 mmu-miR-702 161 190 CUCG-CCCCAUUUC--CC------ACCCGU |||| |||| |||| || |||||| GAGCTGGGGGAAAGTAGGAAGATTTGGGCA Ubap1 mmu-miR-709 532 556 AGGAGGA---CG---GAGACGGAGg ||:|| | || |||||||| TCTTCATGGGGCAAAGTCTGCCTCt Ubap1 mmu-miR-709 754 771 AGGAGGACGGAGACGGAgg |||||| ||| ||||:| TCCTCCAGCC-CTGCTTta Ubap1 mmu-miR-711 445 466 gaauguagAGAGGGGCCCAGGg |||:||:||| || tgagagggTCTTCCTGGGCCCg Ubap1 mmu-miR-744 1 14 cgacaauCGGGAUCGGGGCGu | |||:||||:|| -------GACCTGGCCCTGCt Ubap1 mmu-miR-761 345 366 acacagucaaaguggGACGACG ||||||| gacaggaggagcagaCTGCTGC Ubap1 mmu-miR-762 740 765 CGAG-AC-AG--GGCCGGGGUCGGGg |:|| || | || |:||||||| GTTCTTGAACAGCCTCCTCCAGCCCt Ubap1 mmu-miR-762 1 22 cgaGACAGGGCCGGGGUCGGGg ||| ||| ||: |:|||| gacCTGGCCCTGCTACGGCCCt Ubap1 mmu-miR-762 18 44 CGAGACAGGGCC--GG-GGUCGGGG-- || ||| | | | || ||| :||| GCCCTGCCACAGCACCACCATTCCCCA Ubap1 mmu-miR-770-3p 686 714 GGUCGAG-GUGCA-------GUCCGGGUGC ||||| | :: || |||| ||||| CCAGCACATGGGTGAGAAAACAGG-CCACG Ubap1 mmu-miR-93 510 532 GAUGGACGUGCUUGU-CGUGAAAc ||: | |:|| || | ||||||| CTG-CGGTACAAAGATGCACTTTt

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ubap1 RAID00092076 mmu-miR-7231-5p miRNA MIMAT0028430 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00103695 mmu-miR-3969 miRNA MIMAT0019353 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00168797 mmu-miR-6715-3p miRNA MIMAT0029877 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00187992 mmu-miR-106b-5p miRNA MIMAT0000386 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID00276531 mmu-miR-322-5p miRNA MIMAT0000548 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00315014 mmu-miR-20b-5p miRNA MIMAT0003187 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID00333494 mmu-miR-6356 miRNA MIMAT0025099 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00366130 mmu-miR-883a-5p miRNA MIMAT0004848 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00440869 mmu-miR-3095-3p miRNA MIMAT0014912 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00448927 mmu-miR-132-3p miRNA MIMAT0000144 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00451794 mmu-miR-384-5p miRNA MIMAT0004745 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00477174 mmu-miR-16-5p miRNA MIMAT0000527 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00482596 mmu-miR-20a-5p miRNA MIMAT0000529 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID00498456 mmu-miR-7a-5p miRNA MIMAT0000677 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00499483 mmu-miR-1906 miRNA MIMAT0007872 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00589329 mmu-miR-762 miRNA MIMAT0003892 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00609989 mmu-miR-181a-5p miRNA MIMAT0000210 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00635383 mmu-miR-17-5p miRNA MIMAT0000649 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID00777573 mmu-miR-30a-5p miRNA MIMAT0000128 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00800035 mmu-miR-3102-5p.2-5p miRNA MIMAT0014934 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00800972 mmu-miR-30d-5p miRNA MIMAT0000515 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00918889 mmu-miR-181c-5p miRNA MIMAT0000674 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID00984239 mmu-miR-200c-3p miRNA MIMAT0000657 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01025699 mmu-miR-6949-5p miRNA MIMAT0027798 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01208337 mmu-miR-6383 miRNA MIMAT0025129 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01229964 mmu-miR-15b-5p miRNA MIMAT0000124 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01280480 mmu-miR-350-5p miRNA MIMAT0017040 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01293252 mmu-miR-291b-3p miRNA MIMAT0003190 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01306555 mmu-miR-7001-5p miRNA MIMAT0027904 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01310272 mmu-miR-7212-5p miRNA MIMAT0028392 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01438809 mmu-miR-6972-5p miRNA MIMAT0027846 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01466885 mmu-miR-346-3p miRNA MIMAT0017039 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01537559 mmu-miR-3061-3p miRNA MIMAT0014829 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01555701 mmu-miR-298-5p miRNA MIMAT0000376 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01574254 mmu-miR-6951-5p miRNA MIMAT0027802 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01584111 mmu-miR-7648-3p miRNA MIMAT0029799 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01604302 mmu-miR-1192 miRNA MIMAT0005850 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID01609098 mmu-miR-30e-5p miRNA MIMAT0000248 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01625040 mmu-miR-7117-5p miRNA MIMAT0028131 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01651747 mmu-miR-142a-3p miRNA MIMAT0000155 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01663292 mmu-miR-8118 miRNA MIMAT0031424 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01692871 mmu-miR-384-3p miRNA MIMAT0001076 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01783564 mmu-miR-293-5p miRNA MIMAT0004573 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID01846247 mmu-miR-485-5p miRNA MIMAT0003128 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID01866885 mmu-miR-7683-3p miRNA MIMAT0029887 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02031181 mmu-miR-3475-3p miRNA MIMAT0015219 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02040674 mmu-miR-465c-5p miRNA MIMAT0004873 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02044024 mmu-miR-7027-5p miRNA MIMAT0027958 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02107817 mmu-miR-429-3p miRNA MIMAT0001537 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02119845 mmu-miR-592-5p miRNA MIMAT0003730 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02208026 mmu-miR-15a-5p miRNA MIMAT0000526 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02238150 mmu-miR-7b-5p miRNA MIMAT0000678 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02269464 mmu-miR-1896 miRNA MIMAT0007873 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02282530 mmu-miR-465d-5p miRNA MIMAT0029880 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02283143 mmu-miR-5113 miRNA MIMAT0020621 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02291733 mmu-miR-6969-5p miRNA MIMAT0027840 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02406535 mmu-miR-495-3p miRNA MIMAT0003456 Ubap1 mRNA 67123 Prediction 0.2381 Ubap1 RAID02414335 mmu-miR-199a-5p miRNA MIMAT0000229 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID02433256 mmu-miR-6238 miRNA MIMAT0024859 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02434318 mmu-miR-3971 miRNA MIMAT0019356 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02443779 mmu-miR-411-5p miRNA MIMAT0004747 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02452373 mmu-miR-196a-5p miRNA MIMAT0000518 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02464005 mmu-miR-106a-5p miRNA MIMAT0000385 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID02473999 mmu-miR-6940-5p miRNA MIMAT0027780 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02507455 mmu-miR-195a-5p miRNA MIMAT0000225 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02611877 mmu-miR-465b-5p miRNA MIMAT0004871 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02649582 mmu-miR-22-3p miRNA MIMAT0000531 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02684267 mmu-miR-140-5p miRNA MIMAT0000151 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02764223 mmu-miR-497a-5p miRNA MIMAT0003453 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02778918 mmu-miR-369-3p miRNA MIMAT0003186 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID02874180 mmu-miR-374c-5p miRNA MIMAT0014953 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID02896956 mmu-miR-361-5p miRNA MIMAT0000704 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03111088 mmu-miR-499-5p miRNA MIMAT0003482 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03123998 mmu-miR-292b-5p miRNA MIMAT0029864 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03124986 mmu-miR-30c-5p miRNA MIMAT0000514 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03148819 mmu-miR-292a-5p miRNA MIMAT0000369 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03188064 mmu-miR-181b-5p miRNA MIMAT0000673 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03188555 mmu-miR-221-5p miRNA MIMAT0017060 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03232521 mmu-miR-494-3p miRNA MIMAT0003182 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03283779 mmu-miR-200b-3p miRNA MIMAT0000233 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03316590 mmu-miR-199b-5p miRNA MIMAT0000672 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID03424689 mmu-miR-1197-3p miRNA MIMAT0005858 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID03432017 mmu-miR-539-5p miRNA MIMAT0003169 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03459790 mmu-miR-465a-5p miRNA MIMAT0002106 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03468936 mmu-miR-216c-5p miRNA MIMAT0029888 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03488950 mmu-miR-501-5p miRNA MIMAT0003508 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03525705 mmu-miR-5134-5p miRNA MIMAT0020645 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03537452 mmu-miR-3569-3p miRNA MIMAT0029855 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03569416 mmu-miR-294-5p miRNA MIMAT0004574 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03622366 mmu-miR-6419 miRNA MIMAT0025175 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03662735 mmu-miR-7094-1-5p miRNA MIMAT0028094 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03672781 mmu-miR-196b-5p miRNA MIMAT0001081 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03695483 mmu-miR-6983-3p miRNA MIMAT0027869 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03717080 mmu-miR-212-3p miRNA MIMAT0000659 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03774541 mmu-miR-186-5p miRNA MIMAT0000215 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03778791 mmu-miR-509-5p miRNA MIMAT0004890 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03848410 mmu-miR-194-5p miRNA MIMAT0000224 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03866247 mmu-miR-7010-5p miRNA MIMAT0027924 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03874829 mmu-miR-129b-3p miRNA MIMAT0029863 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03911515 mmu-miR-6937-3p miRNA MIMAT0027775 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03915576 mmu-miR-30b-5p miRNA MIMAT0000130 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID03969390 mmu-miR-876-3p miRNA MIMAT0004855 Ubap1 mRNA 67123 Prediction 0.1828 Ubap1 RAID04033678 mmu-miR-93-5p miRNA MIMAT0000540 Ubap1 mRNA 67123 Prediction 0.2202 Ubap1 RAID04047700 mmu-miR-6901-3p miRNA MIMAT0027703 Ubap1 mRNA 67123 Prediction 0.1828