Usp1
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Usp1ATTTA485-28393111-3115;3243-3247;3409-3413;3555-3559
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT001668mmu-miR-375-3pMus musculusUsp1230484Mus musculusLuciferase reporter assay//Reporter assay;OtherFunctional MTI15806104
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004522mmu-miR-27b*230484Usp1caAGUGGUUAGUCGAUUCGAga ||| :|| | :|||||| ggUCAAUAA-AAUUUAAGCUgu321706726[mm9:4:98602202-98602222:+]0.60311340-11.06-0.3116
MIMAT0004523mmu-miR-29b*230484Usp1auuugguggUAU-AC-UUUGGUcg ||| || |||||| agauuuuaaAUACUGAAAACCAug314136159[mm9:4:98601632-98601655:+]0.58611270-8.77-0.2273
MIMAT0000129mmu-miR-30a*230484Usp1cgacguuuguaggcUGACUUUc ||||||| gugagauuuuaaauACUGAAAa29133154[mm9:4:98601629-98601650:+]0.58611407-6.60-1.2653
MIMAT0004533mmu-miR-141*230484Usp1agguUGUGACGUGACCU-UCUAc | || | ||||| |||| uauuAAACAGACCUGGACAGAUg2192244[mm9:4:98601518-98601540:+]0.58611220-16.50-0.6725
MIMAT0000249mmu-miR-30e*230484Usp1cgacauuuguaggcUGACUUUc ||||||| gugagauuuuaaauACUGAAAa29133154[mm9:4:98601629-98601650:+]0.58611407-8.19-1.2653
MIMAT0004578mmu-miR-300*230484Usp1uguuuccuAUUGGAGAGAAGUu | :: |||||||| ugacuaauUUGUAUCUCUUCAu215612633[mm9:4:98602108-98602129:+]0.60311467-11.64-1.1700
MIMAT0004580mmu-miR-34c*230484Usp1ggaccgaCA-CACCAAUCACUAa || | | ||||||| uuccuuaGUAGAGACUAGUGAUg216178200[mm9:4:98601674-98601696:+]0.58611427-9.85-0.2493
MIMAT0004580mmu-miR-34c*230484Usp1ggaccGACACACCAAUCACUaa :| | | |||||| ggcuuUUAUAUAAAUAGUGAga318117138[mm9:4:98601613-98601634:+]0.58611210-8.79-0.2772
MIMAT0004581mmu-miR-34b-3p230484Usp1cuaccGUCACCUC-AAUCACUAa :||| ||| ||||||| uuccuUAGUAGAGACUAGUGAUg218178200[mm9:4:98601674-98601696:+]0.58611567-14.20-0.2427
MIMAT0004581mmu-miR-34b-3p230484Usp1cuaccgucaccucaAUCACUaa |||||| ggcuuuuauauaaaUAGUGAga39117138[mm9:4:98601613-98601634:+]0.58611200-7.50-0.2845
MIMAT0004625mmu-miR-16*230484Usp1agUCGUCGUGUCAGUUAUGACc ||:: |: | ||||||| auAGUGAGAUUUUAAAUACUGa221130151[mm9:4:98601626-98601647:+]0.58611487-11.24-1.3119
MIMAT0004628mmu-miR-21*230484Usp1cugucggguagcugaCGACAAc |||||| gucaauaaaauuuaaGCUGUUu28707728[mm9:4:98602203-98602224:+]0.60311206-9.03-0.5375
MIMAT0000549mmu-miR-322*230484Usp1cacaacgucgcgaaGUACAAa |||||| uaaauacugaaaacCAUGUUa28142162[mm9:4:98601638-98601658:+]0.58611206-5.45-0.5410
MIMAT0004640mmu-miR-325230484Usp1aacuAUCCUCCACGAGUUAUUu |:||||| ||||||| aaacUGGGAGG---UCAAUAAa219697715[mm9:4:98602193-98602211:+]0.60311547-16.87-0.8771
MIMAT0000569mmu-miR-330*230484Usp1agagacguccgggACACGAAAcg | |||||| augaucuuuugugUUUGCUUUuu311278300[mm9:4:98601774-98601796:+]0.61291220-11.77-0.1399
MIMAT0004665mmu-miR-218-1*230484Usp1ccacgaacugccUUGGUACAAa ||||||||| uuaaauacugaaAACCAUGUUa211141162[mm9:4:98601637-98601658:+]0.58611507-13.55-1.3272
MIMAT0005444mmu-miR-218-2*230484Usp1gcgccacgaacugucUUGGUAc |||||| auuuuaaauacugaaAACCAUg28138159[mm9:4:98601634-98601655:+]0.58611206-12.11-0.2693
MIMAT0004704mmu-miR-335-3p230484Usp1ccaguccucgUUAUUACUUUUu |||| |||||| ugagauuuuaAAUACUGAAAAc213134155[mm9:4:98601630-98601651:+]0.58611286-6.75-0.1843
MIMAT0002105mmu-miR-464230484Usp1auagagugUCUUAUUUGAAC-CAu :||| ||||||| || augagcugGGAACAAACUUGUGUa216202225[mm9:4:98601698-98601721:+]0.58611270-13.22-1.0570
MIMAT0002106mmu-miR-465a-5p230484Usp1agUGUAGUCACG-GUAAGAUUUAu | | : |||: ||||||||| acAAACUUGUGUAGAUUCUAAAUg222213236[mm9:4:98601709-98601732:+]0.58611567-15.94-0.8173
MIMAT0002107mmu-miR-466a-3p230484Usp1agaauacacacgcACAUACAUAu | ||||||| uucauaagaauuuUAUAUGUAUu211550572[mm9:4:98602046-98602068:+]0.57051427-5.56-1.1701
MIMAT0002107mmu-miR-466a-3p230484Usp1agaaUACACACGCACAUACAUAu | || | | ||||||| cacaAAGUCU-AGAAUAUGUAUa220454475[mm9:4:98601950-98601971:+]0.57171417-7.34-1.0940
MIMAT0002108mmu-miR-467a-1*230484Usp1cacaUCCACA-CACAUACAUAUa | || | | |||||||| cacaAAGUCUAGAAUAUGUAUAu219454476[mm9:4:98601950-98601972:+]0.57171497-8.02-0.8814
MIMAT0002111mmu-miR-470230484Usp1ugaguggucacggucaGGUUCUu |||||| ggucuggcuuuuucacCCAAGAa28364386[mm9:4:98601860-98601882:+]0.60071206-14.37-0.1846
MIMAT0004781mmu-miR-532-3p230484Usp1acguucggaacccacACCCUCc |||||| aacuuuuuuaaaaacUGGGAGg28686707[mm9:4:98602182-98602203:+]0.60311206-14.33-0.1127
MIMAT0003129mmu-miR-485*230484Usp1cucuccucucggcACAUACUGa |||:|||| acaucaacuuagaUGUGUGACc210661682[mm9:4:98602157-98602178:+]0.60311290-10.61-0.1121
MIMAT0004790mmu-miR-503*230484Usp1gguccgucaccuuugUUAUGAg |||||| aauagugagauuuuaAAUACUg28129150[mm9:4:98601625-98601646:+]0.58611206-11.64-0.2215
MIMAT0014815mmu-miR-3099*230484Usp1guucccgaccuuccUUCGACc |||||| ggucaauaaaauuuAAGCUGu28706726[mm9:4:98602202-98602222:+]0.60311206-6.06-0.3790
MIMAT0003477mmu-miR-669a230484Usp1uguACUUGUACGUGUGU-GUUGa || |||| | ||| |||| aucUGUACAUAGA-ACAUCAACu220648669[mm9:4:98602144-98602165:+]0.60311210-12.71-1.1231
MIMAT0003741mmu-miR-674*230484Usp1aacaagacucuacccUCGACAc |||||| ggucaauaaaauuuaAGCUGUu28706727[mm9:4:98602202-98602223:+]0.60311206-6.88-0.6908
MIMAT0003462mmu-miR-684230484Usp1aacugaacuuccCUUUUGa |||||| auuuuaaauacuGAAAACc28138156[mm9:4:98601634-98601652:+]0.58611206-3.93-0.2085
MIMAT0004189mmu-miR-693-3p230484Usp1aaugucgguguagacuUUCGACg |||||| gaggucaauaaaauuuAAGCUGu28704726[mm9:4:98602200-98602222:+]0.60311206-12.89-0.3701
MIMAT0003478mmu-miR-467b*230484Usp1cacaacCACA-CACAUACAUAUa || | | |||||||| cacaaaGUCUAGAAUAUGUAUAu217454476[mm9:4:98601950-98601972:+]0.57171477-7.98-0.8814
MIMAT0004827mmu-miR-297b-3p230484Usp1auaccCAUACACACAUACAUAu | || | | ||||||| cauaaGAAU-UUUAUAUGUAUu218552572[mm9:4:98602048-98602068:+]0.57051477-5.56-1.1664
MIMAT0004827mmu-miR-297b-3p230484Usp1auacccauacacacAUACAUAu ||||||| cacaaagucuagaaUAUGUAUa29454475[mm9:4:98601950-98601971:+]0.57171407-7.07-1.0940
MIMAT0003497mmu-miR-707230484Usp1gcAUCCGUUCG-----CCGUACUGAc ||| ||| | ||||||||| ucUAGUCAAUCUUUUUGGCAUGACUa220592617[mm9:4:98602088-98602113:+]0.58681547-17.56-0.9745
MIMAT0003498mmu-miR-708*230484Usp1gaUCU-UCGAG-UGUCAGAUCAac ||| :|||| ::| |||||| gaAGAUGGCUCUGUACUCUAGUca321576599[mm9:4:98602072-98602095:+]0.57051420-16.64-0.1517
MIMAT0003781mmu-miR-676*230484Usp1cguucaggauuccaaCAUCUCa |||||| gaaucauuuuccuuaGUAGAGa28170191[mm9:4:98601666-98601687:+]0.58611206-12.12-0.1221
MIMAT0004237mmu-miR-742230484Usp1aaAUGGGUCGUAC-CACCGAAAg |::::| :| | ||||||| gaUGUUUA-UAGGUCUGGCUUUu221354375[mm9:4:98601850-98601871:+]0.60071417-12.24-0.6912
MIMAT0004237mmu-miR-742230484Usp1aaaugggucguaccaCCGAAAg |||||| uuauuggucucucuaGGCUUUu28102123[mm9:4:98601598-98601619:+]0.58611206-10.18-0.1077
MIMAT0004841mmu-miR-871230484Usp1guACUGACCGUGAUU-AGA-CUUAu | | ||||| || ||| |||| uaUCAGAGGCACAAAGUCUAGAAUa222445469[mm9:4:98601941-98601965:+]0.57171280-17.07-1.1114
MIMAT0004843mmu-miR-879*230484Usp1ggcuuucgaacuucGGUAUUCg :|||||| aauccccucuaucuUCAUAAGa29537558[mm9:4:98602033-98602054:+]0.57051246-7.72-0.2418
MIMAT0004844mmu-miR-880230484Usp1agaugagucucuccuACCUCAu |||||| guauucuccauauucUGGAGUa28321342[mm9:4:98601817-98601838:+]0.62541206-13.11-0.1860
MIMAT0004845mmu-miR-881*230484Usp1ucUACACUGACAAUAGAGAGAc || | |:|| :||||||| ggAUAUUAUUG--GUCUCUCUa22197116[mm9:4:98601593-98601612:+]0.58611537-13.91-0.9808
MIMAT0004846mmu-miR-881230484Usp1agauaaGUCUUU--UCUGUGUCAa ::|||: |||||||| ccaaaaUGGAAGCUUGACACAGUu217239262[mm9:4:98601735-98601758:+]0.58611477-16.60-0.6149
MIMAT0004856mmu-miR-105230484Usp1ugguguucguagacucGUGAACc |||||| agcuugacacaguuaaCACUUGg28249271[mm9:4:98601745-98601767:+]0.58611206-16.21-0.1409
MIMAT0004864mmu-miR-297a*230484Usp1auaccCAUACACACAUACAUAu | || | | ||||||| cauaaGAAU-UUUAUAUGUAUu218552572[mm9:4:98602048-98602068:+]0.57051477-5.56-1.1664
MIMAT0004864mmu-miR-297a*230484Usp1auacccauacacacAUACAUAu ||||||| cacaaagucuagaaUAUGUAUa29454475[mm9:4:98601950-98601971:+]0.57171407-7.07-1.0940
MIMAT0004866mmu-miR-297c*230484Usp1auaccCAUACACACAUACAUAu | || | | ||||||| cauaaGAAU-UUUAUAUGUAUu218552572[mm9:4:98602048-98602068:+]0.57051477-5.56-1.1664
MIMAT0004866mmu-miR-297c*230484Usp1auacccauacacacAUACAUAu ||||||| cacaaagucuagaaUAUGUAUa29454475[mm9:4:98601950-98601971:+]0.57171407-7.07-1.0940
MIMAT0004871mmu-miR-465b-5p230484Usp1gucuagucguggUAAGAUUUAu ||||||||| aaacuuguguagAUUCUAAAUg211215236[mm9:4:98601711-98601732:+]0.58611507-9.21-0.8244
MIMAT0004873mmu-miR-465c-5p230484Usp1gucuagucgcggUAAGAUUUAu ||||||||| aaacuuguguagAUUCUAAAUg211215236[mm9:4:98601711-98601732:+]0.58611507-13.32-0.8244
MIMAT0004876mmu-miR-466b-3p230484Usp1agaauacacacgcACAUACAUAu | ||||||| uucauaagaauuuUAUAUGUAUu211550572[mm9:4:98602046-98602068:+]0.57051427-5.56-1.1701
MIMAT0004876mmu-miR-466b-3p230484Usp1agaaUACACACGCACAUACAUAu | || | | ||||||| cacaAAGUCU-AGAAUAUGUAUa220454475[mm9:4:98601950-98601971:+]0.57171417-7.34-1.0940
MIMAT0005453mmu-miR-466b-3-3p230484Usp1agaauacacacgcACAUACAUAa | ||||||| uucauaagaauuuUAUAUGUAUu211550572[mm9:4:98602046-98602068:+]0.57051427-6.29-1.1701
MIMAT0005453mmu-miR-466b-3-3p230484Usp1agaaUACACACGCACAUACAUAa | || | | ||||||| cacaAAGUCU-AGAAUAUGUAUa220454475[mm9:4:98601950-98601971:+]0.57171417-5.08-1.0940
MIMAT0004878mmu-miR-466c-3p230484Usp1agaauacacacgcACAUACAUAu | ||||||| uucauaagaauuuUAUAUGUAUu211550572[mm9:4:98602046-98602068:+]0.57051427-5.56-1.1701
MIMAT0004878mmu-miR-466c-3p230484Usp1agaaUACACACGCACAUACAUAu | || | | ||||||| cacaAAGUCU-AGAAUAUGUAUa220454475[mm9:4:98601950-98601971:+]0.57171417-7.34-1.0940
MIMAT0004880mmu-miR-466e-3p230484Usp1agaauacacacgcACAUACAUAu | ||||||| uucauaagaauuuUAUAUGUAUu211550572[mm9:4:98602046-98602068:+]0.57051427-5.56-1.1701
MIMAT0004880mmu-miR-466e-3p230484Usp1agaaUACACACGCACAUACAUAu | || | | ||||||| cacaAAGUCU-AGAAUAUGUAUa220454475[mm9:4:98601950-98601971:+]0.57171417-7.34-1.0940
MIMAT0004882mmu-miR-466f-3p230484Usp1cacacauacacacaCACAUAc |||||| guauauucacaaugGUGUAUa28471491[mm9:4:98601967-98601987:+]0.57171206-6.34-0.1624
MIMAT0004887mmu-miR-467d*230484Usp1cacaUCCACA-CACAUACAUAUa | || | | |||||||| cacaAAGUCUAGAAUAUGUAUAu219454476[mm9:4:98601950-98601972:+]0.57171497-8.02-0.8814
MIMAT0004890mmu-miR-509-5p230484Usp1uacUAA-CGGUGUAAGACCUCAu ||| |||:|||||||||| uguAUUCUCCAUAUUCUGGAGUa220320342[mm9:4:98601816-98601838:+]0.62541747-27.09-1.2198
MIMAT0004891mmu-miR-509-3p230484Usp1gguaaugucuuuaCAGUUAGu ||||||| gcucuguacucuaGUCAAUCu29583603[mm9:4:98602079-98602099:+]0.57051407-9.27-1.0679
MIMAT0004891mmu-miR-509-3p230484Usp1gguaaUGUCUUUACAGUUAgu || |::| |||||| uaaaaACUGGGAGGUCAAUaa317694714[mm9:4:98602190-98602210:+]0.60311360-10.47-0.1548
MIMAT0004931mmu-miR-466d-3p230484Usp1gauacacacgcACAUACAUAu | ||||||| cauaagaauuuUAUAUGUAUu211552572[mm9:4:98602048-98602068:+]0.57051427-5.56-1.1701
MIMAT0004931mmu-miR-466d-3p230484Usp1gaUACACACGCACAUACAUAu | || | | ||||||| caAAGUCU-AGAAUAUGUAUa220456475[mm9:4:98601952-98601971:+]0.57171417-7.34-1.0940
MIMAT0004932mmu-miR-878-5p230484Usp1acagaacUGUAGGUUG-AUCUAu |||| |||| ||||| acauagaACAU-CAACUUAGAUg216654675[mm9:4:98602150-98602171:+]0.60311250-13.62-0.7374
MIMAT0004933mmu-miR-878-3p230484Usp1agaugggucacaccaCAGUACg |||||| uuuaguuuuauaauaGUCAUGa28405426[mm9:4:98601901-98601922:+]0.59021206-10.98-0.1334
MIMAT0005293mmu-miR-467e230484Usp1uguaUAUGUACGAGUGUGAAUa | ||| |:| ||||||: cuugACACA-GUUAACACUUGg219251271[mm9:4:98601747-98601767:+]0.58611400-11.99-0.1133
MIMAT0005294mmu-miR-467e*230484Usp1uauaUCCACA-CACAUACAUAUa | || | | |||||||| cacaAAGUCUAGAAUAUGUAUAu219454476[mm9:4:98601950-98601972:+]0.57171497-7.98-0.8814
MIMAT0005830mmu-miR-466l230484Usp1uuaUACACACGUACAUAAAUAu || | | :|||||||||| agaAU-UUUAUAUGUAUUUAUg220556576[mm9:4:98602052-98602072:+]0.57051617-12.07-0.6244
MIMAT0005830mmu-miR-466l230484Usp1uuauacacACGU-ACAUAAAUau | || | |||||| caaucucaUUCAGUAUAUUUAgu315388410[mm9:4:98601884-98601906:+]0.59021250-2.22-0.1464
MIMAT0005838mmu-miR-669j230484Usp1acAAACGUACACU---CAUAUACGu | | ||| || ||||||: uaUCUUCAUAAGAAUUUUAUAUGUa221546570[mm9:4:98602042-98602066:+]0.57051270-7.64-0.2165
MIMAT0005839mmu-miR-669f230484Usp1uaugcaCACA-CACAUACAUAUAc || | | ||||||||| cacaaaGUCUAGAAUAUGUAUAUu218454477[mm9:4:98601950-98601973:+]0.57171527-7.38-0.8956
MIMAT0005839mmu-miR-669f230484Usp1uaugcacacacACAUACAUAUAc || :||||||| uauauucacaaUG-GUGUAUAUu213472493[mm9:4:98601968-98601989:+]0.57171427-6.80-0.4907
MIMAT0005839mmu-miR-669f230484Usp1uaugcacacacacauaCAUAUAc |||||| gaaacaaucucauucaGUAUAUu28384406[mm9:4:98601880-98601902:+]0.59021206-3.49-0.1021
MIMAT0005840mmu-miR-669i230484Usp1cauacguacacACAUAUACGu | ||||||: uucauaagaauUUUAUAUGUa211550570[mm9:4:98602046-98602066:+]0.57051260-6.04-0.2165
MIMAT0005846mmu-miR-467f230484Usp1acauccacacACACACAUAUa || ||||||| auauucacaaUG-GUGUAUAu212473492[mm9:4:98601969-98601988:+]0.57171417-9.75-0.6629
MIMAT0005849mmu-miR-1191230484Usp1aucccGAUGUAUCAU-UCUGAc :| | ||||| ||||| ucauuUUCCUUAGUAGAGACUa217173194[mm9:4:98601669-98601690:+]0.58611240-8.28-0.9212
MIMAT0005851mmu-miR-1193230484Usp1cuaUCAUUUUGCCCACUGGAu | | |:|:| ||||||| ucaACUUAGAUGUGUGACCUu219664684[mm9:4:98602160-98602180:+]0.60311587-16.17-1.0821
MIMAT0005852mmu-miR-1194230484Usp1uccuagaucgucaauGAGUAAg |||||| cacccaagaaacaauCUCAUUc28377398[mm9:4:98601873-98601894:+]0.59021206-10.06-0.1237
MIMAT0005854mmu-miR-467g230484Usp1uaUAUAC-ACACACAUACAUAu ||| | | | ||||||| ucAUAAGAAUUUUAUAUGUAUu220551572[mm9:4:98602047-98602068:+]0.57051467-5.56-1.1683
MIMAT0005854mmu-miR-467g230484Usp1uauaUACACA-CACAUACAUAu | || | | ||||||| cacaAAGUCUAGAAUAUGUAUa218454475[mm9:4:98601950-98601971:+]0.57171447-7.07-1.0916
MIMAT0005855mmu-miR-467h230484Usp1uguaUAUGUACGUGUGUGAAUa | ||| |: ||||||: cuugACACA-GUUAACACUUGg219251271[mm9:4:98601747-98601767:+]0.58611320-10.16-0.1133
MIMAT0005857mmu-miR-1196230484Usp1uccGUCUCCGUCCAUCUAAa || | :: ||||||| gaaCAAACUUGUGUAGAUUc218211230[mm9:4:98601707-98601726:+]0.58611457-7.10-0.7901
MIMAT0007864mmu-miR-1897-5p230484Usp1gggggagaAAGA---GGUAGGUUUc |||| : ||||||| uguguagaUUCUAAAUGAUCCAAAa215220244[mm9:4:98601716-98601740:+]0.58611417-9.57-0.8892
MIMAT0009418mmu-miR-669l230484Usp1uguAUAUGUACGUGUGU-GUUGa |:||||| | ||| |||| aucUGUACAUAGA-ACAUCAACu220648669[mm9:4:98602144-98602165:+]0.60311250-15.35-1.1209
MIMAT0009419mmu-miR-669m230484Usp1uauacaaacacaccUACAUAUa ||||||| acaaagucuagaauAUGUAUAu29455476[mm9:4:98601951-98601972:+]0.57171407-6.28-0.8882
MIMAT0009421mmu-miR-669o230484Usp1uguAUUUGUACGUGUGU-GUUGAu |: |||| | ||| ||||| aucUGUACAUAGA-ACAUCAACUu221648670[mm9:4:98602144-98602166:+]0.60311220-12.47-0.8051
MIMAT0009428mmu-miR-1956230484Usp1aggcgACUGAGUCGGGACCUGa | | ||| ||||||| aaauaUUAAACAGACCUGGACa2181940[mm9:4:98601515-98601536:+]0.58611537-18.28-1.1644
MIMAT0011210mmu-miR-2134230484Usp1cgUGGGGCAAAGGGUUCUg :|::: | ||||||| ugGCUUUUUCACCCAAGAa218368386[mm9:4:98601864-98601882:+]0.60071457-13.92-1.2211
MIMAT0011212mmu-miR-2136230484Usp1guguagagucaguuGUGGGUc |||||| aggucuggcuuuuuCACCCAa28363383[mm9:4:98601859-98601879:+]0.60071206-12.87-0.1378
MIMAT0011216mmu-miR-2140230484Usp1uggugguucuAGACGUGga ||||||| ucauacucuuUCUGCACga310630648[mm9:4:98602126-98602144:+]0.60311250-12.62-0.1449
MIMAT0011222mmu-miR-2146230484Usp1guguaccuugggAAGAGGUg ||||||| cuuguauuuguaUUCUCCAu29312331[mm9:4:98601808-98601827:+]0.63971407-10.62-1.1735
MIMAT0012772mmu-miR-599230484Usp1caaACUAUUUGACUGUGUu ||: |: :||||||| aaaUGGAAGCUUGACACAg217242260[mm9:4:98601738-98601756:+]0.58611527-15.53-0.8160
MIMAT0015640mmu-miR-3470a230484Usp1ggucggaccagaUGUUUCACu |:|||||| uugcuuuuuaaaAUAAAGUGc210292312[mm9:4:98601788-98601808:+]0.63971296-9.89-0.2883
MIMAT0000134mmu-miR-124230484Usp1ccGUAAGUGGCGCACGGAAu ::| :|:: :||||||| ggUGUAUAUUUUGUGCCUUg219484503[mm9:4:98601980-98601999:+]0.57111507-18.81-1.0519
MIMAT0000153mmu-miR-141230484Usp1gguagaaauGGUCUGUC-ACAAu |::||||| |||| uaaacagacCUGGACAGAUGUUg2142547[mm9:4:98601521-98601543:+]0.58611210-18.16-0.8229
MIMAT0000156mmu-miR-144230484Usp1ucaUGUAGUAGAUAUGACau | ||: | |||||| gugAGAUUUUAAAUACUGaa318133152[mm9:4:98601629-98601648:+]0.58611290-6.62-0.2140
MIMAT0000160mmu-miR-150230484Usp1gugaccauguucccaACCCUCu |||||| aacuuuuuuaaaaacUGGGAGg28686707[mm9:4:98602182-98602203:+]0.60311206-13.29-0.1093
MIMAT0000233mmu-miR-200b230484Usp1agUAGUAAUGGUCCGUCAUAau | || | :|| |||||| gaAACAAUCUCAUUCAGUAUau321384405[mm9:4:98601880-98601901:+]0.59021360-8.51-0.1608
MIMAT0000519mmu-miR-200a230484Usp1uguagcaauGGUCUGUC-ACAAu |::||||| |||| uaaacagacCUGGACAGAUGUUg2142547[mm9:4:98601521-98601543:+]0.58611210-18.87-0.8229
MIMAT0000530mmu-miR-21230484Usp1aguuguagucagacuAUUCGAu |||||| gaggucaauaaaauuUAAGCUg28704725[mm9:4:98602200-98602221:+]0.60311206-9.87-0.2712
MIMAT0000533mmu-miR-26a230484Usp1ucGGAUAGGACC-------UA-AUGAACUu | |||:|||| || ||||||| ucCAUAUUCUGGAGUAAUUAUCUACUUGAu221327356[mm9:4:98601823-98601852:+]0.62541467-21.57-0.7884
MIMAT0000534mmu-miR-26b230484Usp1uggAUAGGAC----UUA----AUGAACUu |||:||| ||| ||||||| ccaUAUUCUGGAGUAAUUAUCUACUUGAu219328356[mm9:4:98601824-98601852:+]0.62541447-17.13-0.7884
MIMAT0004651mmu-miR-340-5p230484Usp1uuAGUCAGAGUAA-CGAAAUAUu ||||| | || |:|||||| auUCAGUAUAUUUAGUUUUAUAa221395417[mm9:4:98601891-98601913:+]0.59021516-13.19-0.1518
MIMAT0000590mmu-miR-342-3p230484Usp1ugcccacgcuaaagACACACUcu ||||||| aacaucaacuuagaUGUGUGAcc310660682[mm9:4:98602156-98602178:+]0.60311250-8.98-0.3111
MIMAT0000597mmu-miR-346230484Usp1ucUCCGUCCGUGAGCCCGU-CUGu || || | :|: |||| ||| cuAGUCAAUCUUUUUGGCAUGACu222593616[mm9:4:98602089-98602112:+]0.58681210-11.03-1.0245
MIMAT0000657mmu-miR-200c230484Usp1aggUAGUAAUGGGCCGUCAUAau | || | :| |||||| agaAACAAUCUCAUUCAGUAUau321383405[mm9:4:98601879-98601901:+]0.59021280-8.56-0.1608
MIMAT0000662mmu-miR-216a230484Usp1agugucaacgGUCGACUCUAAu :|| ||||||| uuuauauaaaUAG-UGAGAUUu213121141[mm9:4:98601617-98601637:+]0.58611427-11.37-1.0796
MIMAT0000741mmu-miR-377230484Usp1uguuuucaacggaaACACACUa ||||||| aacaucaacuuagaUGUGUGAc29660681[mm9:4:98602156-98602177:+]0.60311407-9.99-0.9248
MIMAT0000747mmu-miR-382230484Usp1gcUUAGGUGGUGCUUG-UUGAAg :|| :|:: |||| ||||| ugGAUGAGCUGGGAACAAACUUg221199221[mm9:4:98601695-98601717:+]0.58611240-14.65-0.7474
MIMAT0001091mmu-miR-410230484Usp1uguccgguagacacAAUAUAa |||||| gucucucuaggcuuUUAUAUa28108128[mm9:4:98601604-98601624:+]0.58611206-6.61-0.1078
MIMAT0001091mmu-miR-410230484Usp1uguccgguagacacAAUAUAa |||||| ucuucauaagaauuUUAUAUg28548568[mm9:4:98602044-98602064:+]0.57051206-3.80-0.1545
MIMAT0001537mmu-miR-429230484Usp1ugccGUAAUGGUCUGUCAUAau || | :|| |||||| gaaaCAAUCUCAUUCAGUAUau319384405[mm9:4:98601880-98601901:+]0.59021340-9.46-0.1608
MIMAT0003729mmu-miR-216b230484Usp1aguguaaacggacguCUCUAAa |||||| uuuuauauaaauaguGAGAUUu28120141[mm9:4:98601616-98601637:+]0.58611206-8.26-0.1568
MIMAT0003738mmu-miR-496230484Usp1cucUAAC-CGGUACAUUAUGAgu | || | : | |||||| aauAGUGAGAUUUUAAAUACUga320129151[mm9:4:98601625-98601647:+]0.58611220-8.97-0.3346
MIMAT0004895mmu-miR-590-5p230484Usp1gacgugaaaauacuuAUUCGAg |||||| gaggucaauaaaauuUAAGCUg28704725[mm9:4:98602200-98602221:+]0.60311206-4.73-0.2735
MIMAT0004896mmu-miR-590-3p230484Usp1ugAUCGAAUAUGUAUUUUAAu |:| :| |||||||| acUGGGAGGUCAAUAAAAUUu220699719[mm9:4:98602195-98602215:+]0.60311477-8.80-0.4211
MIMAT0004896mmu-miR-590-3p230484Usp1ugauCGAAU-AUGUAUUUUAau |:||: | : |||||| uuguGUUUGCUUUUUAAAAUaa318286307[mm9:4:98601782-98601803:+]0.63971280-3.53-0.1826
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G064272Usp1Mus musculus230484
DNA & RNA Element - miRecords
Gene NamemiRNA SpeciesmiRNA Mature IDmiRNA RegulationTarget Site PositionPubmed ID
Usp1Mus musculusmmu-miR-375NANA15806104
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Usp1mmu-miR-881beg:243end:263pic:3' AGATAAGTCTTTT--CTGTGTCAA 5'& .|||. ||||||||| &5' -------GGAAGCTTGACACAGTT 3'
Usp1mmu-miR-707beg:605end:617pic:3' GCATCCGTTCGCCGTACTGAC 5'& ||||||||| &5' -----------GGCATGACT- 3'
Usp1mmu-miR-218-1starbeg:146end:162pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||| ||||||||| &5' ------TGAA--AACCATGTT- 3'
Usp1mmu-miR-2134beg:367end:386pic:3' CGTGGGGCAAAGGGTTCTG 5'& .|.. | ||||||| &5' --GCTTTTTCACCCAAGA- 3'
Usp1mmu-miR-509-5pbeg:325end:343pic:3' TACTAACGGTGTAAGACCTCAT 5'& |||.||||||||||| &5' -------CCATATTCTGGAGTA 3'
Usp1mmu-miR-381beg:301end:325pic:3' TGTCTCTCGAACGGGAACATAT 5'& |.| || |||||. .|||||| &5' ATAAAGTGCTTGTATTTGTAT- 3'
Usp1mmu-miR-509-3pbeg:593end:603pic:3' GGTAATGTCTTTACAGTTAGT 5'& ||||||| &5' -------------GTCAATC- 3'
Usp1mmu-miR-1193beg:668end:684pic:3' CTATCATTTTGCCCACTGGAT 5'& |.|.| ||||||| &5' -------AGATGTGTGACCT- 3'
Usp1mcmv-miR-m108-1beg:511end:530pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& || | |.| ||||||| &5' -GAAA-GTGTC----TCAGAAA 3'
Usp1mcmv-miR-m21-1beg:0end:19pic:3' GCCGAACTTGCAC--AGGGGATA 5'& |||. | ||||||.| &5' -----TGAGTATATTTCCCCTGT 3'
Usp1mghv-miR-M1-6beg:422end:450pic:3' TTTTGGT--GGAG-TGTGTCAAAGT 5'& .||.||| .||| .|.| || ||| &5' GAAGCCAAATCTCTGCGCTGTATCA 3'
Usp1mghv-miR-M1-6beg:381end:402pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& .|||| |.||||. |||| &5' GAAACAATCTCATTCAGT---- 3'
Usp1mmu-miR-150starbeg:430end:451pic:3' GATAGGGGGTCCG-GACATGGTC 5'& |||.|. || |||||.||| &5' --ATCTCT---GCGCTGTATCAG 3'
Usp1mmu-miR-151-3pbeg:65end:80pic:3' GGAGTTCCTC-GGAGTCAGATC 5'& ||| |.|.|||.|| &5' -------GAGTCTTTAGTTTA- 3'
Usp1mmu-miR-16starbeg:130end:151pic:3' AGTCG-TCGTGTCAGTTATGACC 5'& .||. || ||||||| &5' -TAGTGAGATTTTA-AATACTG- 3'
Usp1mmu-miR-1839-5pbeg:528end:552pic:3' GTTCTGGACA---AGAT-AGATGGAA 5'& ||||| || ||||.||| &5' ----ACCTGGCAATCCCCTCTATCTT 3'
Usp1mmu-miR-1897-5pbeg:537end:560pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& ||||||| |||.||| .|| &5' -CCCCTCTATCTTCATAAGAA- 3'
Usp1mmu-miR-1958beg:170end:183pic:3' TGAATGACGAAGGTGAAAGGAT 5'& .||.|||||| &5' -----------TCATTTTCCT- 3'
Usp1mmu-miR-1967beg:169end:194pic:3' CGTAG-AAGAGGGGTC--CTAGGAGT 5'& ||| ||.|||..|| || || &5' --ATCATTTTCCTTAGTAGAGACT-- 3'
Usp1mmu-miR-1967beg:532end:554pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& ||| ||||| |||.||| &5' GCAA----TCCCCTCTATCTTCA 3'
Usp1mmu-miR-1969beg:528end:552pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |||.. |||.||||| &5' ACCTGGCAATCCC-CTCTATCTT 3'
Usp1mmu-miR-2140beg:425end:444pic:3' TGGTGGTTCT-AGACGTGGA 5'& .|||| |||||.|. &5' ---GCCAAATCTCTGCGCT- 3'
Usp1mmu-miR-2146beg:321end:332pic:3' GTGTACCTTGGGAAGAGGTG 5'& |||||||. &5' ------------TTCTCCAT 3'
Usp1mmu-miR-215beg:697end:711pic:3' CAGACAGTTTAGTATCCAGTA 5'& ||| |||||| &5' --CTGGG-------AGGTCA- 3'
Usp1mmu-miR-218beg:443end:459pic:3' TGTACCAATCTAGT--TCGTGTT 5'& |||| .|||||| &5' ----------ATCAGAGGCACAA 3'
Usp1mmu-miR-291b-3pbeg:299end:321pic:3' TGTTTGTTTTACCTACGTGAAA 5'& |||.|||.|| ||.|.|| &5' --AAATAAAGTGCTTGTATTT- 3'
Usp1mmu-miR-300starbeg:539end:554pic:3' TGTTTCCTATTGGAG--AGAAGTT 5'& |||| |||||| &5' -----------CCTCTATCTTCA- 3'
Usp1mmu-miR-30abeg:344end:364pic:3' GAAGGTCAGCTCCTACAAATGT 5'& ||.| |. ||||||||.| &5' --TCTACTT---GATGTTTATA 3'
Usp1mmu-miR-30bbeg:351end:364pic:3' TCGACTCACATCCTACAAATGT 5'& ||||||||.| &5' ------------GATGTTTATA 3'
Usp1mmu-miR-30cbeg:351end:364pic:3' CGACTCTCACATCCTACAAATGT 5'& ||||||||.| &5' -------------GATGTTTATA 3'
Usp1mmu-miR-30dbeg:344end:364pic:3' GAAGGTCAGCCCCTACAAATGT 5'& ||.| |. ||||||||.| &5' --TCTACTT---GATGTTTATA 3'
Usp1mmu-miR-30ebeg:344end:364pic:3' GAAGGTCAGTTCCTACAAATGT 5'& ||.| |. ||||||||.| &5' --TCTACTT---GATGTTTATA 3'
Usp1mmu-miR-30estarbeg:131end:154pic:3' CGACATTTGT-AGGC--TGACTTTC 5'& ||.|. |. ||||||| &5' ---GTGAGATTTTAAATACTGAAA- 3'
Usp1mmu-miR-338-3pbeg:38end:49pic:3' GTTGTTTTAGTGACTACGACCT 5'& ||||.||| &5' -------------GATGTTGG- 3'
Usp1mmu-miR-34b-3pbeg:180end:200pic:3' CTACCGTCACCTCA-ATCACTAA 5'& .||| ||| ||||||| &5' -----TAGTAGAGACTAGTGAT- 3'
Usp1mmu-miR-375beg:198end:218pic:3' AGTGC-GCTCGGCTTGCTTGTTT 5'& | .||||.|. ||||||| &5' ----GATGAGCTGG--GAACAAA 3'
Usp1mmu-miR-381beg:206end:226pic:3' TGTCTCTCGAACGGGAACATAT 5'& |.| |||||.|| &5' -----GGGAACAAACTTGTGTA 3'
Usp1mmu-miR-452beg:6end:24pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||||| |||.|||.| &5' -------TTTCCCCTGTAAATA 3'
Usp1mmu-miR-465a-5pbeg:128end:148pic:3' AGTGTAGTCACGGTAAGATTTAT 5'& .|||| |||.|||||| &5' ------TAGTGAGATTTTAAATA 3'
Usp1mmu-miR-465b-5pbeg:218end:237pic:3' GTCTAGTCGTGG-TAAGATTTAT 5'& | . |||||||||. &5' -------GTGTAGATTCTAAATG 3'
Usp1mmu-miR-465c-5pbeg:128end:148pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& .||.| |||.|||||| &5' -----TAGTGAGATTTTAAATA 3'
Usp1mmu-miR-465c-5pbeg:218end:237pic:3' GTCTAGTCGCGG-TAAGATTTAT 5'& |.|. |||||||||. &5' -------GTGTAGATTCTAAATG 3'
Usp1mmu-miR-466lbeg:306end:324pic:3' TTATACACACGTACATAAATAT 5'& |||| |||||||.|| &5' -------GTGCTTGTATTTGTA 3'
Usp1mmu-miR-466lbeg:562end:577pic:3' TTATACACACGTACATAAATAT 5'& .||||||||||. &5' ----------TATGTATTTATG 3'
Usp1mmu-miR-467ebeg:254end:271pic:3' TGTATATGTACGAGTGTGAATA 5'& ||| |.| ||||||. &5' ------ACA-GTTAACACTTG- 3'
Usp1mmu-miR-469beg:436end:456pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& .|.|.. ||| ||||||| &5' --GCGCTGT-ATC------AGAGGCA 3'
Usp1mmu-miR-491beg:309end:332pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& || | | |||.|||. &5' -CTTGTATTTGTATTCTCCAT- 3'
Usp1mmu-miR-493beg:672end:687pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||. ||||||.| &5' -----------GTGTGACCTTTA 3'
Usp1mmu-miR-493beg:532end:554pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||||| |.||||| &5' --TGGCAATCCCCTCTATCTTCA 3'
Usp1mmu-miR-496beg:462end:480pic:3' CTCTAACCGGTACATTATGAGT 5'& | .|||| |||.||| &5' ------GAATATGT-ATATTCA 3'
Usp1mmu-miR-511beg:435end:456pic:3' ACTCACGTCTCGT--TTTCCGTA 5'& |||. |.| |.||||| &5' ----TGCGCTGTATCAGAGGCA- 3'
Usp1mmu-miR-592beg:437end:459pic:3' TGTAGTAGCG-TATAA---CTGTGTTA 5'& ||| .||| |.||||| &5' -------CGCTGTATCAGAGGCACAA- 3'
Usp1mmu-miR-592beg:247end:262pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& || ||||||||.| &5' --------GC---TTGACACAGT 3'
Usp1mmu-miR-599beg:242end:261pic:3' CAAACTATTTG-ACTGTGTT 5'& ||. ||.| |||||||. &5' ---TGG-AAGCTTGACACAG 3'
Usp1mmu-miR-741beg:619end:631pic:3' AGATGTATCTTACCGTAGAGAGT 5'& |.||||||. &5' -------------GTATCTCTT- 3'
Usp1mmu-miR-742beg:355end:376pic:3' AAATGGGTCGTACCACCGAAAG 5'& ||||. .|. |||||||. &5' TTTATA-GGTC---TGGCTTTT 3'
Usp1mmu-miR-743b-5pbeg:26end:41pic:3' ACTACCTGTGGTCA-GACTTGT 5'& ||| |||.||| &5' ----------CAGACCTGGACA 3'
Usp1mmu-miR-767beg:468end:490pic:3' ACGAGTCTGTTGGTACCACGT 5'& ||. .| || ||||||.| &5' TGTATATTCACA-ATGGTGTA 3'
Usp1mmu-miR-872beg:663end:685pic:3' GGACTTGA--TTGTTCATTGGAA 5'& |||| .|.. ||.||||| &5' ----AACTTAGATGTGTGACCTT 3'
Usp1mmu-miR-881starbeg:95end:116pic:3' TCTACACTGACAATAGAGAGAC 5'& .||| | |.|| .||||||| &5' GGATATTATTG--GTCTCTCT- 3'
Usp1mmu-miR-93starbeg:34end:57pic:3' GCCCT-TC-ACGATCGAGTCGTCA 5'& ||| || ||.|.|. ||. | &5' --GGACAGATGTTGGTAAAGTTG- 3'
Usp1mmu-miR-9starbeg:393end:416pic:3' TGAAAGCCA-ATAGATCGAAATA 5'& ||| || |||.|||.||||| &5' ---TTCAGTATATTTAGTTTTAT 3'
Usp1mmu-miR-325beg:698end:716pic:3' AACTATCCTCCACGAGTTATTT 5'& |.||||| |||||||| &5' ----TGGGAGG---TCAATAAA 3'
Usp1mmu-miR-465a-5pbeg:218end:237pic:3' AGTGTAGTCACGG-TAAGATTTAT 5'& |||. |||||||||. &5' --------GTGTAGATTCTAAATG 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Usp1mmu-miR-124a483505-CCGUAAGUGGCGCACGGAAU- ||::| :|:: |||||||:UGGUGUAUAUUUUGUGCCUUGA
Usp1mmu-miR-133a192218UGUCG--ACCAACUUC-CCCUGGUU- :||: ||| |||: |||| |||CUAGUGAUGGAUGAGCUGGGAACAAA
Usp1mmu-miR-133b192218-AUCG--ACCAACUUC-CCCUGGUU- |||: ||| |||: |||| |||CUAGUGAUGGAUGAGCUGGGAACAAA
Usp1mmu-miR-1412849GGUAGAAAUGG-UCUGUC-ACAAU- || ||| :||||| ||||:ACAG----ACCUGGACAGAUGUUGG
Usp1mmu-miR-145199221UUCCCUAAG-GACCCU--UUUGACCUG |||| |||||| |||||--UGGAUGAGCUGGGAACAAACUU---
Usp1mmu-miR-146b497527UCGGAU---------ACCUUAAGUCA-AGAGU- |||| ||||| ||| |||||UGCCUUGAAUAACUUUGGAA---AGUGUCUCAG
Usp1mmu-miR-149187213CCUCACUUCUGUGCCU---CGGUCU- ||| || |:||| ||::|:AGAGACUAGUGAUGGAUGAGCUGGGA
Usp1mmu-miR-151446467GGAGUUCCUCGGAG-UCAGAUC- |||: :|| |||||||-AUCAGA-GGCACAAAGUCUAGA
Usp1mmu-miR-152428458GGGUUCA-AGAC-------AGUA--CGUGACU |||| |||| ||| ||||GCCAAAUCUCUGCGCUGUAUCAGAGGCACA--
Usp1mmu-miR-185366384CUUGACGGAAAGAGA-GGU- ||| ||||:|| |||--UCUGGCUUUUUCACCCAA
Usp1mmu-miR-187436458-GGC-CGACGUUGUGUUCUGUGCU |:| ||||:| :||:|||UCUGCGCUGUAUCA-GAGGCACA-
Usp1mmu-miR-192356371ACAGUUAAGUAUCCAGUC- :||:||||||| |----UGUUUAUAGGUCUGG
Usp1mmu-miR-200a2749-UGUAGCAAUGG-UCUGUC-ACAAU- ||| ||| :||||| ||||:AACAG----ACCUGGACAGAUGUUGG
Usp1mmu-miR-210426459AGUCGG----------CGAC--AGUGUGCGUGUC |||| |||| ||| | |||||-AAGCCAAAUCUCUGCGCUGUAUCAGAGGCACAA
Usp1mmu-miR-2222951CUCUGGGUCAUCGGUCUAC-AUCGA |||||::| |||||| |:|:CAGACCUGGA---CAGAUGUUGGUA
Usp1mmu-miR-24*440458-UGACUAUAGUCGAGUCAUCCGUG- :||| |||||| ||||||CGCUG-UAUCAG------AGGCACA
Usp1mmu-miR-26a327357CGG-AUAGGACCUA--------AUGAACUU || |||:||||| |||||||UCCAUAUUCUGGAGUAAUUAUCUACUUGAU
Usp1mmu-miR-26b327357UUGG-AUAGGACUUA--------AUGAACUU || |||:|||:| |||||||-UCCAUAUUCUGGAGUAAUUAUCUACUUGAU
Usp1mmu-miR-293421458UGUGAU---GUUU-GAGACG-----------CCGUGA ||: |||| |||||| |||||UCAUGAAGCCAAAUCUCUGCGCUGUAUCAGAGGCACA
Usp1mmu-miR-337186213-UUUCCG--UAGUAUAUCCUCGACUU- |:|| :| ||: ||||||::UAGAGACUAGUGAUGGAUGAGCUGGGA
Usp1mmu-miR-3382650AGUUGUUUUAG--UGACUACGACCU ||||:| || ||||:|||-AAACAGACCUGGACAGAUGUUGGU
Usp1mmu-miR-375197219AGUGC--GCUCGGCUUGCUUGUUU- |:| :||||:|: |||||||-GAUGGAUGAGCUGG--GAACAAAC
Usp1mmu-miR-381197227-UGUCU-CUCGAA-CGG----GAACAUAU- |::|| ||||| | |||||:||GAUGGAUGAGCUGGGAACAAACUUGUGUAG
Usp1mmu-miR-382494514GCUUAGGUGGUGCUUGUUGAAG- | ::|| |||:|||||:---UUGUGCCUUGAAUAACUUUG
Usp1mmu-miR-384194215ACACUUGUUAAA-GAUCCUUA |||| :|| ||:||||AGUGAUGGAUGAGCUGGGAAC
Usp1mmu-miR-423513538GACUCCC-CGGAGUCU---GGCUCGA || | |:|||||| || :||-GGAAAGUGUCUCAGAAAACCUGGCA
Usp1mmu-miR-434-5p184210CCAAGUUUGGU-ACU--CAGCUCGA- || |:||:| ||| | :|||||AGUAGAGACUAGUGAUGGAUGAGCUG
Usp1mmu-miR-455-5p439459-GCUACAUCAGGUUUCCGUGUAU || |||| :||:|||||||GCGCUGUA--UCAGAGGCACAA-
Usp1mmu-miR-465-5p121149-AGUGUA---GUCACGGUAAGAUUUAU- |:|:|| :|||| |||:||||||UUUAUAUAAAUAGUGAGAUUUUAAAUAC
Usp1mmu-miR-491520548-GGAGUACCUU---CCCA-AGGGGUGA- :|||| || ||||| ||GUCUCAGAAAACCUGGCAAUCCCCUCUA
Usp1mmu-miR-669b641664UGUACGUGU---ACGUGUGUUUUGA |||||: ||:|||:|:|||--CUGCACGAUCUGUACAUAGAACA
Usp1mmu-miR-671104125GGAGGUCGGGGAGGUCCCGAAGGA :::|:|:|||:| |||||::--AUUGGUCUCUCUA-GGCUUUUA
Usp1mmu-miR-672652672GUGUGUGUCAUGUGGUUGGAGU :|||:|| |||:||||:|-GUACAUAGAACAUCAACUUA-
Usp1mmu-miR-674*191211AACAAGA-CUCUACC--CUCGACAC || | ||||| ||||||----ACUAGUGAUGGAUGAGCUGG-
Usp1mmu-miR-675-5p634648UGACACCCGGGAAAGGCGUGGU |:|||||:||||-------ACUCUUUCUGCACG-
Usp1mmu-miR-681436456UCGACG-GACGGUCGCUCCGAC |||| |||: |||||-UCUGCGCUGUAUCAGAGGCA-
Usp1mmu-miR-68569100CACGGAG------UGGAG----UCGGUAACU- |:||: |:||: |||:||||:-AGUCUUUAGUUUAUCUUUUGAAGCUAUUGGA
Usp1mmu-miR-695417438AAGUCAGUGGAUACGGGUUAGA- :|||||: | ||| |||||-AUAGUCAUGAA-GCCAAAUCUC
Usp1mmu-miR-707581618GCAUCCGU---------UCG----------CCGUACUGAC ||| ||: |||||||||---UGGCUCUGUACUCUAGUCAAUCUUUUUGGCAUGACUA
Usp1mmu-miR-710172203GAGUUGAGAGGGG----UUCUGA-----ACC- || |:|:|||:: :||||| |||AUC-AUUUUCCUUAGUAGAGACUAGUGAUGGA
Usp1mmu-miR-764-3p74115UGUCAA-----------CGGUGAU--------ACCGGAGGA :|||| ||:|:|: |||:|||:UUAGUUUAUCUUUUGAAGCUAUUGGAUAUUAUUGGUCUCUC
Usp1mmu-miR-124a496503-----------------------CCGUAAGUGGCGCACGGAAU ||::| :|: :|||||||:UCUAGAAUAUGUAUAUUCACAAUGGUGUAUAUUUUGUGCCUUGA
Usp1mmu-miR-26a349356C-------------GG-AUAGGACCUA--------AUGAACUU || |||:||||| |||||||UGUAUUUGUAUUCUCCAUAUUCUGGAGUAAUUAUCUACUUGAU
Usp1mmu-miR-26b349356UU------------GG-AUAGGACUUA--------AUGAACUU || |||:|||:| |||||||UGUAUUUGUAUUCUCCAUAUUCUGGAGUAAUUAUCUACUUGAU
Usp1mmu-miR-381312319UGUCU------CUCGAACGG---------------GAACAUAU | |:||||: |||||||CAUGAUCUUUUGUGUUUGCUUUUUAAAAUAAAGUGCUUGUAUU
Usp1mmu-miR-465-5p229236A-------------------GUGUAGUCACGG-UAAGAUUUAU || |||: |||||||||:AGUGAUGGAUGAGCUGGGAACAAACUUGUGUAGAUUCUAAAUGA
Usp1mmu-miR-707610617GCAU---CCGUUC-------------------GCCGUACUGAC ||| :|||||||||UGAAGAUGGCUCUGUACUCUAGUCAAUCUUUUUGGCAUGACUA
Usp1mmu-miR-106b435460uAGACGUGAC--AGU---CGUGaaau |||||:||| ||| ||||cTCTGCGCTGTATCAGAGGCACaaag
Usp1mmu-miR-124a484503CCGUAAGUGGCGCACGGAAu||::| :|:: :|||||||GGTGTATATTTTGTGCCTTg
Usp1mmu-miR-133a194216uguCGACCAACUU-CCCCUGGUU | ||| |||: |||| |||agtGATGGATGAGCTGGGAACAA
Usp1mmu-miR-133b193216AUCG--ACCAACUU-CCCCUGGUU|||: ||| |||: |||| |||TAGTGATGGATGAGCTGGGAACAA
Usp1mmu-miR-1412447gguagaaaUGG-UCUGUC-ACAAu ||| :||||| ||||ttaaacagACCTGGACAGATGTTg
Usp1mmu-miR-145186212uUCCCUAAGGAC--CCU-UUUGACCug || || | || ||| :|:||||tAGAGACTAGTGATGGATGAGCTGGga
Usp1mmu-miR-146b506525ucgGAUACCUUAAGUCA-AGAGU || ||||| ||| |||||taaCTTTGGAA---AGTGTCTCA
Usp1mmu-miR-149192211ccUCACUUCUGUGCCUCGGUCu ||||| |: |: ||||::|ctAGTGATGG-AT-GAGCTGGg
Usp1mmu-miR-151445465ggAGUUCCUCG-GAGUCAGAUC || || :|| | |||||||taTC-AGAGGCACAAAGTCTAG
Usp1mmu-miR-185364381CUUGACGGAAAGAGAGGu|: ||| ||||:|| ||GGTCTGGCTTTTTCACCc
Usp1mmu-miR-187437458GGC-CGACGUUGUGUUCUGUGcu|:| ||||:| || :||:|||CTGCGCTGTATCA-GAGGCACaa
Usp1mmu-miR-192352369acaguuAAGUAUCCAGuc ||:|||||||ttgatgTTTATAGGTCtg
Usp1mmu-miR-200a2447uguagcaaUGG-UCUGUC-ACAAu ||| :||||| ||||ttaaacagACCTGGACAGATGTTg
Usp1mmu-miR-210436458AGUCGGCGAC--AGUGUGCGUGUc|| | ||||| ||| | |||||TCTG-CGCTGTATCAGAGGCACAa
Usp1mmu-miR-24*429456ugacUAUAGUCG------AGUCAUCCGUG || || || |||| ||||||ccaaATCTCTGCGCTGTATCAG-AGGCAC
Usp1mmu-miR-26a327356cGG-AUAGGACC-------UA-AUGAACUu || |||:|||| || |||||||tCCATATTCTGGAGTAATTATCTACTTGAt
Usp1mmu-miR-26b326356uuGG-AUAGGAC----UUA----AUGAACUu || |||:||| ||| |||||||ctCCATATTCTGGAGTAATTATCTACTTGAt
Usp1mmu-miR-293439457uGUGAUGUUUGAGACGCCGUGa |:||::| || | |||||gCGCTGTA---TCAGAGGCACa
Usp1mmu-miR-337187211UUUCCG--UAGUAUAUCCUCGACuu|:|| | :| ||: | ||||||AGAGACTAGTGATGGATGAGCTGgg
Usp1mmu-miR-3382549AGUUGUUUUAG--UGACUACGACCu| ||||:| : || ||||:|||TAAACAGACCTGGACAGATGTTGGt
Usp1mmu-miR-375196217AGUGC--GCUCGGCUUGCUUGUUU| |:| :||||:|: |||||||TGATGGATGAGCTGG--GAACAAA
Usp1mmu-miR-381304325UGUCUCUCGAACGGGAACAUAu|:| || |||||: :||||||ATAAAGTGCTTGTATTTGTATt
Usp1mmu-miR-381198225UGUCU-CUCGAAC---G--GGAACAUAU|::|| ||||| | | |||||:||ATGGATGAGCTGGGAACAAACTTGTGTA
Usp1mmu-miR-382491512gcuuAGGUGGUGCUUGUUGAAg | ::|| :|||:|||||atttTGTGCCTTGAATAACTTt
Usp1mmu-miR-455-5p440459GCUACAUCAGGUUUCCGUGUau|| |||| :||:|||||||CGCTGTA--TCAGAGGCACAaa
Usp1mmu-miR-465-5p213236aGUGUAGUCACG-GUAAGAUUUAu || | : |||: |||||||||aCAAACTTGTGTAGATTCTAAATg
Usp1mmu-miR-465-5p122147AGUGUA---GUCACGGUAAGAUUUAU|:|:|| :|||| |||:||||||TTATATAAATAGTGAGATTTTAAATA
Usp1mmu-miR-491521546gGAGUACCUU----CC-CAAGGGGUGA |||| | || || ||||| ||tCTCA-GAAAACCTGGCAATCCCCTCT
Usp1mmu-miR-669b639663uguACGUGU---ACGUGUGUUUUGa |||||: ||:|||:|:|||ttcTGCACGATCTGTACATAGAACa
Usp1mmu-miR-671102124ggagguCGGGGAGGUCCCGAAgga |:|:|||:| |||||ttattgGTCTCTCTA-GGCTTtta
Usp1mmu-miR-672651672gugUGUGUCAUGUGGUUGGAgu |||:|| |||:||||:|tgtACATAGAACATCAACTTag
Usp1mmu-miR-674*187211aacaaGA-CUCUACC--CUCGACac || | ||||| ||||||agagaCTAGTGATGGATGAGCTGgg
Usp1mmu-miR-675-5p627648ugacacccGGGAAAGGCGUGgu |:|||||:||||tcttcataCTCTTTCTGCACga
Usp1mmu-miR-681435456ucGACG-GACGGUCG-CUCCGac |||| ||| :| | |||||ctCTGCGCTG-TATCAGAGGCac
Usp1mmu-miR-6857798CACGGAGUGGA-GUCGGUAACu|| : || ::| |||:||||GTTTATCTTTTGAAGCTATTGg
Usp1mmu-miR-695416436aagUCAGUGGAUACGGGUUAGA ||||| : | ||| |||||aatAGTCA-TGAAGCCAAATCT
Usp1mmu-miR-707592617gcAUCCGUUCG-----CCGUACUGAc ||| ||| | |||||||||tcTAGTCAATCTTTTTGGCATGACTa
Usp1mmu-miR-708448468aUCUUCGAGUGUCAGAUCaac |||:|| || |||||||cAGAGGCACAAAGTCTAGaat
Usp1mmu-miR-764-3p92114ugUCAACGGUGAU-ACCGGAGga | | | :|:|| |||:|||ctATTGGATATTATTGGTCTCtc
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Usp1RAID00089695mmu-miR-429-3pmiRNAMIMAT0001537Usp1mRNA230484Prediction0.1828
Usp1RAID00239228mmu-miR-300-5pmiRNAMIMAT0004578Usp1mRNA230484Prediction0.1828
Usp1RAID00266056mmu-miR-7065-3pmiRNAMIMAT0028035Usp1mRNA230484Prediction0.1828
Usp1RAID00323668mmu-miR-7005-3pmiRNAMIMAT0027915Usp1mRNA230484Prediction0.1828
Usp1RAID00349064mmu-miR-200a-3pmiRNAMIMAT0000519Usp1mRNA230484Prediction0.1828
Usp1RAID00349949mmu-miR-496bmiRNAMIMAT0025158Usp1mRNA230484Prediction0.1828
Usp1RAID00413872mmu-miR-192-5pmiRNAMIMAT0000517Usp1mRNA230484CLIP-seq0.5483
Usp1RAID00566484mmu-miR-3078-5pmiRNAMIMAT0014864Usp1mRNA230484Prediction0.1828
Usp1RAID00583204mmu-miR-467d-3pmiRNAMIMAT0004887Usp1mRNA230484Prediction0.1828
Usp1RAID00590659mmu-miR-7026-5pmiRNAMIMAT0027956Usp1mRNA230484Prediction0.1828
Usp1RAID00616150mmu-miR-26a-5pmiRNAMIMAT0000533Usp1mRNA230484Prediction0.1828
Usp1RAID00647473mmu-miR-124-3pmiRNAMIMAT0000134Usp1mRNA230484Prediction0.2455
Usp1RAID00718859mmu-miR-7077-3pmiRNAMIMAT0028061Usp1mRNA230484Prediction0.1828
Usp1RAID00741812mmu-miR-669f-3pmiRNAMIMAT0005839Usp1mRNA230484Prediction0.1828
Usp1RAID00793741mmu-miR-539-3pmiRNAMIMAT0017208Usp1mRNA230484Prediction0.1828
Usp1RAID00797779mmu-miR-297c-3pmiRNAMIMAT0004866Usp1mRNA230484Prediction0.1828
Usp1RAID00833599mmu-miR-150-5pmiRNAMIMAT0000160Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID00883067mmu-miR-669m-3pmiRNAMIMAT0009419Usp1mRNA230484Prediction0.1828
Usp1RAID00936897mmu-miR-342-3pmiRNAMIMAT0000590Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID01103852mmu-miR-6910-3pmiRNAMIMAT0027721Usp1mRNA230484Prediction0.1828
Usp1RAID01132870mmu-miR-21a-5pmiRNAMIMAT0000530Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID01152182mmu-miR-499-3pmiRNAMIMAT0017254Usp1mRNA230484Prediction0.1828
Usp1RAID01170122mmu-miR-7048-3pmiRNAMIMAT0028001Usp1mRNA230484Prediction0.1828
Usp1RAID01174634mmu-miR-5132-3pmiRNAMIMAT0022988Usp1mRNA230484Prediction0.1828
Usp1RAID01198558mmu-miR-433-3pmiRNAMIMAT0001420Usp1mRNA230484CLIP-seq0.5483
Usp1RAID01238758mmu-miR-467c-3pmiRNAMIMAT0017275Usp1mRNA230484Prediction0.1828
Usp1RAID01264242mmu-miR-200b-3pmiRNAMIMAT0000233Usp1mRNA230484Prediction0.1828
Usp1RAID01294800mmu-miR-1897-5pmiRNAMIMAT0007864Usp1mRNA230484Prediction0.1828
Usp1RAID01300937mmu-miR-669l-3pmiRNAMIMAT0017345Usp1mRNA230484Prediction0.1828
Usp1RAID01336076mmu-miR-297a-3pmiRNAMIMAT0004864Usp1mRNA230484Prediction0.1828
Usp1RAID01346068mmu-miR-590-5pmiRNAMIMAT0004895Usp1mRNA230484Prediction0.1828
Usp1RAID01348947mmu-miR-1193-3pmiRNAMIMAT0005851Usp1mRNA230484Prediction0.1828
Usp1RAID01387550mmu-miR-467e-3pmiRNAMIMAT0005294Usp1mRNA230484Prediction0.1828
Usp1RAID01414028mmu-miR-466d-3pmiRNAMIMAT0004931Usp1mRNA230484Prediction0.1828
Usp1RAID01434473mmu-miR-30d-3pmiRNAMIMAT0017011Usp1mRNA230484Prediction0.1828
Usp1RAID01519461mmu-miR-325-3pmiRNAMIMAT0004640Usp1mRNA230484Prediction0.2202
Usp1RAID01613525mmu-miR-669b-3pmiRNAMIMAT0017250Usp1mRNA230484Prediction0.1828
Usp1RAID01615337mmu-miR-590-3pmiRNAMIMAT0004896Usp1mRNA230484Prediction0.1828
Usp1RAID01615470mmu-miR-216b-5pmiRNAMIMAT0003729Usp1mRNA230484Prediction0.1828
Usp1RAID01616270mmu-miR-6417miRNAMIMAT0025172Usp1mRNA230484Prediction0.1828
Usp1RAID01730804mmu-miR-509-5pmiRNAMIMAT0004890Usp1mRNA230484Prediction0.1828
Usp1RAID01786972mmu-miR-467gmiRNAMIMAT0005854Usp1mRNA230484Prediction0.1828
Usp1RAID01860904mmu-miR-30fmiRNAMIMAT0025179Usp1mRNA230484Prediction0.1828
Usp1RAID01901384mmu-miR-215-5pmiRNAMIMAT0000904Usp1mRNA230484CLIP-seq0.5483
Usp1RAID01940257mmu-miR-467a-3pmiRNAMIMAT0002108Usp1mRNA230484Prediction0.1828
Usp1RAID01953821mmu-miR-370-5pmiRNAMIMAT0017174Usp1mRNA230484Prediction0.1828
Usp1RAID01982239mmu-mir-325miRNAMI0000597Usp1mRNA230484Prediction0.1828
Usp1RAID02032038mmu-miR-669d-3pmiRNAMIMAT0017324Usp1mRNA230484Prediction0.1828
Usp1RAID02265558mmu-miR-467b-3pmiRNAMIMAT0003478Usp1mRNA230484Prediction0.1828
Usp1RAID02343026mmu-miR-466l-3pmiRNAMIMAT0005830Usp1mRNA230484Prediction0.2202
Usp1RAID02371194mmu-miR-26b-5pmiRNAMIMAT0000534Usp1mRNA230484Prediction0.1828
Usp1RAID02414579mmu-miR-377-3pmiRNAMIMAT0000741Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID02455567mmu-miR-346-5pmiRNAMIMAT0000597Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID02471126mmu-miR-7090-3pmiRNAMIMAT0028087Usp1mRNA230484Prediction0.1828
Usp1RAID02500328mmu-miR-190b-3pmiRNAMIMAT0017267Usp1mRNA230484Prediction0.1828
Usp1RAID02513364mmu-miR-669d-2-3pmiRNAMIMAT0014884Usp1mRNA230484Prediction0.1828
Usp1RAID02675919mmu-miR-141-3pmiRNAMIMAT0000153Usp1mRNA230484Prediction0.1828
Usp1RAID02861000mmu-miR-6914-3pmiRNAMIMAT0027729Usp1mRNA230484Prediction0.1828
Usp1RAID02945246mmu-miR-1956miRNAMIMAT0009428Usp1mRNA230484Prediction0.1828
Usp1RAID02980692mmu-miR-466a-3pmiRNAMIMAT0002107Usp1mRNA230484Prediction0.1828
Usp1RAID02995869mmu-miR-200c-3pmiRNAMIMAT0000657Usp1mRNA230484Prediction0.1828
Usp1RAID03012449mmu-miR-410-3pmiRNAMIMAT0001091Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID03064284mmu-miR-30a-3pmiRNAMIMAT0000129Usp1mRNA230484Prediction0.1828
Usp1RAID03082680mmu-miR-382-5pmiRNAMIMAT0000747Usp1mRNA230484Prediction0.1828
Usp1RAID03145284mmu-miR-467fmiRNAMIMAT0005846Usp1mRNA230484Prediction0.1828
Usp1RAID03247878mmu-miR-6898-3pmiRNAMIMAT0027697Usp1mRNA230484Prediction0.1828
Usp1RAID03282419mmu-miR-375-3pmiRNAMIMAT0000739Usp1mRNA230484Reporter Assay//CLIP-seq0.8785
Usp1RAID03345210mmu-miR-218-1-3pmiRNAMIMAT0004665Usp1mRNA230484Prediction0.1828
Usp1RAID03446049mmu-miR-6913-3pmiRNAMIMAT0027727Usp1mRNA230484Prediction0.1828
Usp1RAID03490074mmu-miR-7058-5pmiRNAMIMAT0028020Usp1mRNA230484Prediction0.1828
Usp1RAID03514084mmu-miR-496a-3pmiRNAMIMAT0003738Usp1mRNA230484Prediction0.1828
Usp1RAID03521170mmu-miR-466e-3pmiRNAMIMAT0004880Usp1mRNA230484Prediction0.1828
Usp1RAID03675275mmu-miR-340-5pmiRNAMIMAT0004651Usp1mRNA230484CLIP-seq//Prediction0.6308
Usp1RAID03751303mmu-miR-216a-5pmiRNAMIMAT0000662Usp1mRNA230484Prediction0.1828
Usp1RAID03799659mmu-miR-7013-5pmiRNAMIMAT0027930Usp1mRNA230484Prediction0.1828
Usp1RAID03867489mmu-miR-881-5pmiRNAMIMAT0004845Usp1mRNA230484Prediction0.1828
Usp1RAID03887912mmu-miR-144-3pmiRNAMIMAT0000156Usp1mRNA230484Prediction0.1828
Usp1RAID03890977mmu-miR-30e-3pmiRNAMIMAT0000249Usp1mRNA230484Prediction0.1828
Usp1RAID03927746mmu-miR-7072-3pmiRNAMIMAT0028051Usp1mRNA230484Prediction0.1828
Usp1RAID03936203mmu-miR-381-3pmiRNAMIMAT0000746Usp1mRNA230484Prediction0.1828
Usp1RAID04021390mmu-miR-297b-3pmiRNAMIMAT0004827Usp1mRNA230484Prediction0.1828