DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0009443 mmu-miR-1946b 100090 Zbtb48 uuuucguacacggUGGUGACGGGCCg ||| |||||||| -------------ACCCCUGCCCGGa 2 14 1 13 [mm9:4:151393920-151393932:-] 0.5354 157 7 -23.84 -0.4674 MIMAT0000671 mmu-miR-224 100090 Zbtb48 uugccUUGGUGAUCACUGAAu || ||: ||||||| ccaauAAACAU--GUGACUUa 2 17 26 44 [mm9:4:151393889-151393907:-] 0.4516 145 7 -11.75 -0.8208

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G069358 Zbtb48 Mus musculus 100090

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Zbtb48 mmu-miR-224 beg:21 end:45 pic:3' TTGCCTTGGTGAT-----CACTGAAT 5'& .|||| |||||||| &5' -----GACCAATAAACATGTGACTTA 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Zbtb48; Hkr3; Tzap mmu-let-7i 255 280 -UGUCGUGUUUGAUGA--UGGAGU- :||||:|||:|| | |||||| GGCAGCGCAAGCUCCGGAACCUCAU Zbtb48; Hkr3; Tzap mmu-miR-106b 2 20 UAGACGUGACAGUCGUGAAAU ||||:: ||||:||| UUCUGUGAG--CAGCGCUUC- Zbtb48; Hkr3; Tzap mmu-miR-10a 344 379 -GUGUUUAA----GCCUA---GAU---GUCCCAU- | |::| :||| ||: ||||||: GCUGAGGUCAUUGUGGAGUCCCUGACCCAGGGUGG Zbtb48; Hkr3; Tzap mmu-miR-125a 344 377 -GUGUCCAAUUU--CC-CAGA------GUCCCU | |||| || ||| ||||| GCUGAGGUCAUUGUGGAGUCCCUGACCCAGGGU Zbtb48; Hkr3; Tzap mmu-miR-134 32 60 -GGGGAGAC-CA----GUUGGUCAGUGU |||:|||| | :::|||| |:| CCCCUUCUGAGGCAUGUGGCCAGCCGCC Zbtb48; Hkr3; Tzap mmu-miR-140* 302 340 AGGCACCAAGA--------------UGGGA---CACCAU :||||| ||| |||: |||| GUCGUGGCUCUCCAGCCCCCUGCAGACCUGGAGGUGGG- Zbtb48; Hkr3; Tzap mmu-miR-148a 156 176 UGUUUCAAGACAUCACGUGACU- ||||||| ||||||| || -GAAAGUUCG--AGUGCACCGAG Zbtb48; Hkr3; Tzap mmu-miR-148b 143 176 -UGUUUCAAGACACU-----------ACGUGACU- |||||| ||||| ||||| || CACAAAGG--UGUGAGAAAGUUCGAGUGCACCGAG Zbtb48; Hkr3; Tzap mmu-miR-15b 321 349 -ACAUUUGGUA--CUACAC--GACGAU- || |:||| |:|| |||||: CUGCAGACCUGGAGGUGGGCUCUGCUGA Zbtb48; Hkr3; Tzap mmu-miR-17-3p 181 213 -AUGUUCA-------CGG--GAGU-GACGUCA ||||||| || |||| ||||:| CUACAAGUUCACGCGGCAGGCUCACCUGCGGA Zbtb48; Hkr3; Tzap mmu-miR-17-5p 199 219 -UGA-UGGACGUGACAUUCGUGAAAC :|| ||||||: |:|||| GGCUCACCUGCGG---AGGCACA--- Zbtb48; Hkr3; Tzap mmu-miR-185 294 317 CUUGA---CGGAAA-GAGAGGU- :|: |:| ||||||| AGAUGGUGGUCGUGGCUCUCCAG Zbtb48; Hkr3; Tzap mmu-miR-187 193 233 GGCCG---------ACGU---UGUGU---UCU--GUGCU- |||| |||: :|||| ||| ||||| GCGGCAGGCUCACCUGCGGAGGCACAUGGAGAUCCACGAC Zbtb48; Hkr3; Tzap mmu-miR-193 37 56 -GACCCUGAAACAUCCGGUCAA ||| |:| ||| |||||| UCUGAGGCA-UGU-GGCCAGC- Zbtb48; Hkr3; Tzap mmu-miR-196b 228 249 GGUUGUUGU-CCUU-UGAUGGAU |:|||: |||: ||||| ACGACAGAGUGGAGAACUACA-- Zbtb48; Hkr3; Tzap mmu-miR-200a 215 239 -UGUAGCAAU-GGU-CUGUCACAAU |||| | ||| ||||| || CACAUGGAGAUCCACGACAGAGUG- Zbtb48; Hkr3; Tzap mmu-miR-201 7 27 UCUUGUUACGGAAUGACUCAU ||:||: ||:| |||||| UGAGCAGCGCUUCACUGAGA- Zbtb48; Hkr3; Tzap mmu-miR-204 211 243 GUCCGUAU-CCUA------CUGUUUC-CCUU- ||||| ||| ||||:|| |||: GAGGCACAUGGAGAUCCACGACAGAGUGGAGA Zbtb48; Hkr3; Tzap mmu-miR-214 81 116 -GACGGAC-AGACAC------GGA-----CGACA- ||||| | |||||| ||| ||||| UCUGCCAGAUCUGUGGCAAGACCUUCAAAGCUGUG Zbtb48; Hkr3; Tzap mmu-miR-222 70 99 CUCUGGGUCAU---CGGUCU--ACAUCGA ||:||| |||||| |||:|| CAGGCCCCACUUCUGCCAGAUCUGUGGCA Zbtb48; Hkr3; Tzap mmu-miR-224 506 542 AUUUGCCUUGGUGAU------------CACUGAAU- ::|:|| |||||: |||||||| CGGAUGGCCCCACUGACCAAUAAACAUGUGACUUAG Zbtb48; Hkr3; Tzap mmu-miR-24* 198 219 UGACUAUAGUCGAGUCA-----UCCGUG- :||||| |||||| --------AGGCUCACCUGCGGAGGCACA Zbtb48; Hkr3; Tzap mmu-miR-291a-3p 194 219 -CCGUGUGUUU---CACCUUCGUGAAA |||| :| | |||:|||| CGGCAGGCUCACCUGCGGAGGCACA-- Zbtb48; Hkr3; Tzap mmu-miR-292-3p 190 219 -UGUGA-GUUU---UGGAC-CG-CCGUGAA ||:| ||:: ||||| | ||||| CACGCGGCAGGCUCACCUGCGGAGGCACA- Zbtb48; Hkr3; Tzap mmu-miR-293 190 219 -UGUGAUGUUUGAG---ACG---CCGUGA ||:| :||::||| ||| ||||| CACGCGGCAGGCUCACCUGCGGAGGCACA Zbtb48; Hkr3; Tzap mmu-miR-296 322 345 -UGUCCUAA-CUCCCCCCCGGGA- :||| |||| ||||:|| UGCAGACCUGGAGGU-GGGCUCUG Zbtb48; Hkr3; Tzap mmu-miR-298 64 88 CCUUCUUGU-CGGGA-GGAGACGG- :||::|| |||| |:|||||| -AGAGGGCAGGCCCCACUUCUGCCA Zbtb48; Hkr3; Tzap mmu-miR-300 415 443 -CUUCUCUCGAA-----CGGGAACGUAU ||:|||||||| ||||| ||:| AGAGGAGAGCUUUGCUAGCCCUGGCGUC Zbtb48; Hkr3; Tzap mmu-miR-301b 109 135 ACGAAA-CU-GUU-AUGGUAACGUGAC ||| || ||: ||| | ||||| AGCUGUGGAACAGUUACGAGUGCACG- Zbtb48; Hkr3; Tzap mmu-miR-302 520 547 AGUGGU--UUUGUAC-CU---UCGUGAAU |||| ||||||| || ||||||| -GACCAAUAAACAUGUGACUUAGCACUU- Zbtb48; Hkr3; Tzap mmu-miR-302b 516 547 GAUGAUU------UUGUAC-CU---UCGUGAA |||:| |||||| || ||||||| -CACUGACCAAUAAACAUGUGACUUAGCACUU Zbtb48; Hkr3; Tzap mmu-miR-302c 514 547 -GGUGACU------UUGUAC-CU---UCGUGAAC ||||||| |||||| || ||||||| CCCACUGACCAAUAAACAUGUGACUUAGCACUU- Zbtb48; Hkr3; Tzap mmu-miR-302d 190 219 -UGUGA-GUUUGUA------CCUUCGUGAA ||:| ||::| |||:|||| CACGCGGCAGGCUCACCUGCGGAGGCACA- Zbtb48; Hkr3; Tzap mmu-miR-30a-3p 3 28 CGACGUUUGUA--GGC-UGACUUUC |||::|:|| |: |||||:| UCUGUGAGCAGCGCUUCACUGAGAA Zbtb48; Hkr3; Tzap mmu-miR-30e* 3 28 -GACAUUUGUA--GGC-UGACUUUC ||||:|:|| |: |||||:| UCUGUGAGCAGCGCUUCACUGAGAA Zbtb48; Hkr3; Tzap mmu-miR-324-3p 319 340 -GGUCGUCGUGGACCCCGUCACC- || |||| |||||| :|||| CCCUGCAG-ACCUGGA--GGUGGG Zbtb48; Hkr3; Tzap mmu-miR-326 328 352 UGACCUCCUUCCCGGGU---CUCC- ||||||| ||||:| |||| CCUGGAGGU-GGGCUCUGCUGAGGU Zbtb48; Hkr3; Tzap mmu-miR-328 21 56 UGC-CUUCCCGU-------CUCU---C-CCGGUC- :| ||||||| |||: | |||||| CUGAGAAGGGCCCCCUUCUGAGGCAUGUGGCCAGC Zbtb48; Hkr3; Tzap mmu-miR-339 335 377 -ACUCGAGG-------------ACCUC-----CUG--UCCCU ||:||||: ||||| ||| |||| GUGGGCUCUGCUGAGGUCAUUGUGGAGUCCCUGACCCAGGGU Zbtb48; Hkr3; Tzap mmu-miR-342 131 159 CUGCCCA-CGCUAAAGA--CACACUCU- ||| |||| |||||||| CACGUCAGGCGACACAAAGGUGUGAGAA Zbtb48; Hkr3; Tzap mmu-miR-346 39 76 UCUCCGU---CCG--UGAG---------CCCGUCUGU |||||| ||| :| ||||||:| UGAGGCAUGUGGCCAGCCGCCAUCAAGAGGGCAGGCC Zbtb48; Hkr3; Tzap mmu-miR-351 336 377 GUCCGAGU---UUCC----------CGAGGA----GUCCCU :||||| :||| |: ||| ||||| UGGGCUCUGCUGAGGUCAUUGUGGAGUCCCUGACCCAGGGU Zbtb48; Hkr3; Tzap mmu-miR-362 458 485 AAGU-GUGGAUC---CAAG-GUUCCUAA ||| |||| |||| |:|||| AUCAUCACCGCUGCUGUUCCCGAGGAC- Zbtb48; Hkr3; Tzap mmu-miR-370 48 76 -UUGGUCCAAGGUGGGG---UCGUCCG- ::|||| |||:| :|||||| UGGCCAGCCGCCAUCAAGAGGGCAGGCC Zbtb48; Hkr3; Tzap mmu-miR-412 329 353 UGCCGAUCACCUGGUCC-ACUUCA- :|| :||||:|: | |||:|| CUGGA-GGUGGGCUCUGCUGAGGUC Zbtb48; Hkr3; Tzap mmu-miR-422b 376 405 -CCGGAA--GAC---UGAGGU-UCAGGUC- |||||| || ||||| || |||| UGGCCUUGCCUCCCAACUCCCUAG-CCAGA Zbtb48; Hkr3; Tzap mmu-miR-423 20 57 -GACUC--CCCGG-------------AGUCUGGCUCGA ||||| ||||| | |:|| ||| ACUGAGAAGGGCCCCCUUCUGAGGCAUGUGGCC-AGCC Zbtb48; Hkr3; Tzap mmu-miR-433-5p 194 208 CUUAUUACUGUCCGAGUGGCAU |:|||||||||| ------CGGCAGGCUCACCU-- Zbtb48; Hkr3; Tzap mmu-miR-450b* 466 482 UACGUACGUUUUACAAGGGUUA || ||| |||||||:| -CGC-UGC----UGUUCCCGAG Zbtb48; Hkr3; Tzap mmu-miR-452 309 330 CAGA-GUCAAAGGAGACGUUUGU ||| ||| || |||||:|| CUCUCCAGCC-CC-CUGCAGACC Zbtb48; Hkr3; Tzap mmu-miR-455-3p 471 489 UCACAUAUACGGGCACCUGACGUA |:| |||| ||||||: -----CUGUUCCCGAGGACUGUG- Zbtb48; Hkr3; Tzap mmu-miR-455-5p 191 222 -GCUACAUCA----GGU---UUCCGUGUAU- || | || || :||||||||: ACGCGGCAGGCUCACCUGCGGAGGCACAUGG Zbtb48; Hkr3; Tzap mmu-miR-465-3p 19 40 AGAUGAAUCUUUCCGGGACUAG- ||| ||||:||||| || --CACUGAGAAGGGCCCCCUUCU Zbtb48; Hkr3; Tzap mmu-miR-484 328 370 UAGCCCUCC-CC-----UGACUC--------------GGACU | ||||| || :||||| ||||| -CCUGGAGGUGGGCUCUGCUGAGGUCAUUGUGGAGUCCCUGAC Zbtb48; Hkr3; Tzap mmu-miR-485-5p 185 205 CUUAAGUAGUGCCGGUCGGAGA |:|||| |:|||| || ||| AAGUUCA-CGCGGC-AGGCUCA Zbtb48; Hkr3; Tzap mmu-miR-490 348 379 GUCG----UACCUCAGGA----GGUCCAAC- :|: :|||||||| ||||| || AGGUCAUUGUGGAGUCCCUGACCCAGGGUGG Zbtb48; Hkr3; Tzap mmu-miR-491 33 82 -GGAG---------UACC--------------UUCCCAA- GGGGUGA |||: :||| :|||| ||||||| CCCUUCUGAGGCAUGUGGCCAGCCGCCAUCAAGAGGGCAGGCCCCACUU Zbtb48; Hkr3; Tzap mmu-miR-497 321 349 -AUGUUUGGUG--UCACAC--GACGAC- |:||:||| :||| |||||| CUGCAGACCUGGAGGUGGGCUCUGCUGA Zbtb48; Hkr3; Tzap mmu-miR-503 466 489 -CGUCAUGACAAGGGC----GACGAU || |:||||||||| |||: CGC--UGCUGUUCCCGAGGACUGUG- Zbtb48; Hkr3; Tzap mmu-miR-540 369 388 -GGUCCUAGCUGGAGACUGGA- |||||:| |:|||: :||| CCCAGGGU-GGCCUU--GCCUC Zbtb48; Hkr3; Tzap mmu-miR-542-5p 229 258 GCACUGUACUACU----------AGGGGCUC |||| :||: ||||||: --CGACAGAGUGGAGAACUACAAUCCCCGGC Zbtb48; Hkr3; Tzap mmu-miR-543 163 180 UCUUCACGUGGCGCUUACAAA :||||||||| :||| -CGAGUGCACCGA--GUGUG- Zbtb48; Hkr3; Tzap mmu-miR-652 426 452 -ACGUGUUGGGAUC-----ACCGCGGUAA ||| :|:||||:| ||| ||| UUGC-UAGCCCUGGCGUCCUGGAGCCC-- Zbtb48; Hkr3; Tzap mmu-miR-665 415 448 AUUCC-CUGGAG----------UCGGAGGACCA :||| || ||: :|| |||||| AGAGGAGAGCUUUGCUAGCCCUGGCGUCCUGGA Zbtb48; Hkr3; Tzap mmu-miR-666 306 326 -CCGAGAGUGUCGACACGGGCGA ||||||| |||| ||:|| UGGCUCUC-CAGCCC--CCUGCA Zbtb48; Hkr3; Tzap mmu-miR-668 330 355 -CCAUCACCCGGCUCGGCUCACUGU- || :||||||: ||:||| | || UGGAGGUGGGCUCUGCUGAG-GUCAU Zbtb48; Hkr3; Tzap mmu-miR-671 309 345 -GGAGGUCGGGGA------GGU------CCCGAAGGA :|||||||||| || ||||| |: CUCUCCAGCCCCCUGCAGACCUGGAGGUGGGCU-CUG Zbtb48; Hkr3; Tzap mmu-miR-673 391 413 -GAGGUUCCUGGUCUC-GACACUC |||| :|||||| ||||| ACUCCCUA-GCCAGAGACUGUGU- Zbtb48; Hkr3; Tzap mmu-miR-675-5p 19 62 -UGACA---CCCGGGA-AAGGC---------------GUGGU |||| |||||| |||:| |:||| CACUGAGAAGGGCCCCCUUCUGAGGCAUGUGGCCAGCCGCCAU Zbtb48; Hkr3; Tzap mmu-miR-676* 334 364 -CGUUC-AG--GAUUCCA---ACAUCUCA- |: | || ||:|||| |||:|||| GGUGGGCUCUGCUGAGGUCAUUGUGGAGUC Zbtb48; Hkr3; Tzap mmu-miR-677 256 288 AGUC---UUCGA---UU---AGUAGUGACUU- ||| ||||| :| ||||||:|||: GCAGCGCAAGCUCCGGAACCUCAUCAUUGAGG Zbtb48; Hkr3; Tzap mmu-miR-678 363 409 -GGA---GGUCA----GGAACG--------------UGG-CUCUG ||| |||| |||||| :|| ||||| CCCUGACCCAGGGUGGCCUUGCCUCCCAACUCCCUAGCCAGAGACU Zbtb48; Hkr3; Tzap mmu-miR-681 466 488 UCGACGGACGGUCGCUCC-GAC- |||| |||:: ||||| ||| CGCUG-CUGUUCCCGAGGACUGU Zbtb48; Hkr3; Tzap mmu-miR-683 172 202 -CUC-CUGUG----UCGAA--UGUCGUCC- ||| | :| ||:| :|:||||| CGAGUGUGGCUACAAGUUCACGCGGCAGGC Zbtb48; Hkr3; Tzap mmu-miR-684 229 247 AACUGAACUUC-CCUUUUGA- ||| :|| |||:|||| -CGACA--GAGUGGAGAACUA Zbtb48; Hkr3; Tzap mmu-miR-685 377 408 CACGGAGUGGAG----------UCGGUAACU- ||||::|||| ||||| || -GGCCUUGCCUCCCAACUCCCUAGCCAGAGAC Zbtb48; Hkr3; Tzap mmu-miR-686 187 218 AGAAGUG-GCA---------GAC-CCUUCGUUA ||||| || ||| |||:||| -GUUCACGCGGCAGGCUCACCUGCGGAGGCAC- Zbtb48; Hkr3; Tzap mmu-miR-693-3p 77 116 AAUGU---CGGUGUAGAC-------------UUUCGACG- || |||| ||||| |||||||: -CACUUCUGCCAGAUCUGUGGCAAGACCUUCAAAGCUGUG Zbtb48; Hkr3; Tzap mmu-miR-693-5p 291 312 -CUUUUGAAAGCCUACACCGAC |||:|: :|| |||||| AGAAGAUGG-UGGUCGUGGCUC Zbtb48; Hkr3; Tzap mmu-miR-695 69 94 AAGUCA---GUGGAUACGGGUUAGA- ||| |||:| |||| :|||| -GCAGGCCCCACUUCUGCCAGAUCUG Zbtb48; Hkr3; Tzap mmu-miR-696 204 222 -GGGUGUCGUUCGUGUGCG ||::|:| |:|||||:| ACCUGCGG-AGGCACAUGG Zbtb48; Hkr3; Tzap mmu-miR-699 358 388 GCUCGG---------UCCAGCGUGACGGA- |||:| :||| || :||||| GGAGUCCCUGACCCAGGGUGGCCUUGCCUC Zbtb48; Hkr3; Tzap mmu-miR-702 322 342 CUCGCCCCAUUUC-CCACCCGU || | :| ||||||| -UGCAGACCU-GGAGGUGGGCU Zbtb48; Hkr3; Tzap mmu-miR-704 197 222 GAUCCU------CGUCU-CGUGUACAGA ||| ||:|| ||||||| -CAGGCUCACCUGCGGAGGCACAUGG-- Zbtb48; Hkr3; Tzap mmu-miR-705 377 403 ACGGGUGGGGUG---GAGGG--UGG- |||: ||: ||||| :|| GGCCUUGCCUCCCAACUCCCUAGCCA Zbtb48; Hkr3; Tzap mmu-miR-709 497 518 AGGAGGACGGAGA----CGGAGG- || |||||| | ||| || ACC-CCUGCC-CGGAUGGCC-CCA Zbtb48; Hkr3; Tzap mmu-miR-710 302 334 GAGU--UGAGA-----GGGGU--UCUGAACC- ||: :|||| |||| |||| ||| GUCGUGGCUCUCCAGCCCCCUGCAGACCUGGA Zbtb48; Hkr3; Tzap mmu-miR-711 425 446 GAAUGUAGAGAGGGGCC-CAGGG- ||:| |||:|| ||||: UUUGCUAG---CCCUGGCGUCCUG Zbtb48; Hkr3; Tzap mmu-miR-712* 326 347 GUUGUGGGCCCCCA-CUGAG-CGU |||:|| ||| |:||| || ---GACCUGGAGGUGGGCUCUGCU Zbtb48; Hkr3; Tzap mmu-miR-715 189 215 -GUGCGCCC-CCACACG--UGCCUC- ||||||| || :||||| UCACGCGGCAGGCUCACCUGCGGAGG Zbtb48; Hkr3; Tzap mmu-miR-717 324 351 -UCU---CUUCCAUA-GAGACAGACUC- ||| |:||||: ||||| ||||| CAGACCUGGAGGUGGGCUCUG-CUGAGG Zbtb48; Hkr3; Tzap mmu-miR-742 367 381 AAAUGGGUCGUACCACCGAAAG |||||| |||||| --GACCCAG---GGUGGCC--- Zbtb48; Hkr3; Tzap mmu-miR-744 297 327 -CGACA---AUCGGGA--UCGGGG--CGU- | || |:||:|| |||||| ||| UGGUGGUCGUGGCUCUCCAGCCCCCUGCAG Zbtb48; Hkr3; Tzap mmu-miR-761 458 476 ACACAGUCAAAGUGG-GACGACG- ||| ||||| ||||||: ---AUCA---UCACCGCUGCUGUU Zbtb48; Hkr3; Tzap mmu-miR-762 301 322 CGAGACAGGGCCGG--GGUCGGGG- ||| :|||: |||||||| ----GGUCGUGGCUCUCCAGCCCCC Zbtb48; Hkr3; Tzap mmu-miR-763 89 115 CGGUGACCAA----GAAGGGUCGACC :| ||| |||| ||||| AUCUGUGGCAAGACCUUCAAAGCUGU Zbtb48; Hkr3; Tzap mmu-miR-764-3p 68 106 -UGUCA---------ACGGU---GAUACCGGA--GGA- :||| ||||| ||:|||| ||| GGCAGGCCCCACUUCUGCCAGAUCUGUGGCAAGACCUU Zbtb48; Hkr3; Tzap mmu-miR-770-3p 185 207 GGUCGAG-GUGCAGUCCGGGUGC ||:|| |:|| |||||:||| -AAGUUCACGCGGCAGGCUCACC Zbtb48; Hkr3; Tzap mmu-miR-804 170 195 AGGUCCACUCCU-UGUU-GAGUGU- ||: ||| || |||| :||||: ACCGAGUGUGGCUACAAGUUCACGC Zbtb48; Hkr3; Tzap mmu-miR-93 2 20 GAUGGACGUGCUUGUCGUGAAAC :|||: ||:||||:||| --UUCUGU--GAGCAGCGCUUC- Zbtb48; Hkr3; Tzap mmu-miR-224 533 540 A--------UUUGCCUUGGUGAU------------CACUGAAU ::|:|| |||||: |||||||| CCCCUGCCCGGAUGGCCCCACUGACCAAUAAACAUGUGACUUAG Zbtb48; Hkr3; Tzap mmu-miR-342 150 157 C----------------UGCCCA-CGCUAAAGA--CACACUCU ||| |||| |||||||| GGAACAGUUACGAGUGCACGUCAGGCGACACAAAGGUGUGAGAA Zbtb48; Hkr3; Tzap mmu-miR-425 474 481 CC---GCCU------------------GUG-CUGUAAGGGCUA :||| |:| | ::||||||| CGUCCUGGAGCCCUCUCUCAUCAUCACCGCUGCUGUUCCCGAG Zbtb48; Hkr3; Tzap mmu-miR-431 96 103 --------------------GGACGUACUGC-CGGACGUUCUGU :|||| ||: |: ||||||| UCAAGAGGGCAGGCCCCACUUCUGCCAGAUCUGUG-GCAAGACC Zbtb48; Hkr3; Tzap mmu-miR-455-5p 213 220 GCUACAUC---------------------AGGUUUCCGUGUAU | |::||||||||: UGGCUACAAGUUCACGCGGCAGGCUCACCUGCGGAGGCACAUGG Zbtb48; Hkr3; Tzap mmu-miR-503 466 473 -------CGUCAUGACA---------------AG-GGCGACGAU || || ||| || ||||||||: AGCCCUGGC-GUCCUGGAGCCCUCUCUCAUCAUCACCGCUGCUGU Zbtb48; Hkr3; Tzap mmu-miR-693-3p 107 114 AAUGU-------CGGUGUAGAC-------------UUUCGACG |||| ||||| |||||||: GGCCCCACUUCUGCCAGAUCUGUGGCAAGACCUUCAAAGCUGUG Zbtb48; Hkr3; Tzap mmu-miR-693-5p 176 183 -------------CUUUUGAAAGC-C--------UACACCGAC ||:|| |||| | :||||||| GACACAAAGGUGUGAGAAAGUUCGAGUGCACCGAGUGUGGCUA Zbtb48; Hkr3; Tzap mmu-miR-702 334 341 CUCGCCC-CAUU----------------------UC-CCACCCGU |:|| ||:: :| ||||||| --GUGGUCGUGGCUCUCCAGCCCCCUGCAGACCUGGAGGUGGGCU Zbtb48; Hkr3; Tzap mmu-miR-762 313 320 ---------------------CGAGACAGGGCC--GGGGUCGGGG |: ||| :|| |:|||||||| AUCAUUGAGGAUGAGAAGAUGGUG--GUCGUGGCUCUCCAGCCCCC Zbtb48; Hkr3; Tzap mmu-let-7i 256 278 uGUCGUGUUUGAUG--AUGGAGU ||||:|||:|| | |||||| gCAGCGCAAGCTCCGGAACCTCA Zbtb48; Hkr3; Tzap mmu-miR-106b 1 20 uagacguGACA---GUCGUGAAau |||| ||||:||| ----attCTGTGAGCAGCGCTTca Zbtb48; Hkr3; Tzap mmu-miR-10a 355 377 guguuuaagccuagauGUCCCAu |||||| tgtggagtccctgaccCAGGGTg Zbtb48; Hkr3; Tzap mmu-miR-125a 345 376 gugUCCA-----AUUUC----CCAGAGUCCCu |||| |::|| | | ||||| ctgAGGTCATTGTGGAGTCCCTGACCCAGGGt Zbtb48; Hkr3; Tzap mmu-miR-134 33 59 GGGGAGAC-CAGU----UGGUCAGUGu |||:|||| | || :|||| |:| CCCTTCTGAGGCATGTGGCCAGCCGCc Zbtb48; Hkr3; Tzap mmu-miR-140* 332 352 aggCACCAAGAUGGGACACCAu |||| || : ||| ||| gagGTGG-GCTCTGCTGAGGTc Zbtb48; Hkr3; Tzap mmu-miR-148a 155 174 UGUUUCAAGACAUCACGUGACU | ||||||| | ||||||| || AGAAAGTTC-G-AGTGCACCGA Zbtb48; Hkr3; Tzap mmu-miR-148b 155 174 UGUUUCAAGACACUACGUGACU | ||||||| | | ||||| || AGAAAGTTC-GAG-TGCACCGA Zbtb48; Hkr3; Tzap mmu-miR-15b 322 347 ACAUUUGGUACUACAC----GACGAu || |:||| || ||| ||||| TGCAGACCTGGAGGTGGGCTCTGCTg Zbtb48; Hkr3; Tzap mmu-miR-17-3p 182 200 AUGUUCACGGGAGUGACGUCa ||||||| :| |:| |||| TACAAGT--TCACGCGGCAGg Zbtb48; Hkr3; Tzap mmu-miR-17-5p 200 221 uGA-UGGACGUGACAUUCGUGAAac || |||||| | |:|||| | gCTCACCTGC---GGAGGCACATgg Zbtb48; Hkr3; Tzap mmu-miR-185 298 315 cuugacggaaaGAGAGGU ||||||| ggtggtcgtggCTCTCCA Zbtb48; Hkr3; Tzap mmu-miR-187 205 231 GGCCGACGUUGUGU---UCU--GUGCU || || | ::|||| ||| ||||| CCTGCGGAGGCACATGGAGATCCACGA Zbtb48; Hkr3; Tzap mmu-miR-193 38 56 GACCCUGAAACAUCCGGUCaa ||| |:| ||| |||||| CTGAGGC-ATGT-GGCCAGcc Zbtb48; Hkr3; Tzap mmu-miR-196b 226 250 GGUUGUUGU----CCU-UUGAUGgau || ||:||| ||| |||||| CC-ACGACAGAGTGGAGAACTACaat Zbtb48; Hkr3; Tzap mmu-miR-200a 216 239 UGUAGCAAU-GGU-CUGUCACAau |||| | | ||| ||||| || ACATGGAGATCCACGACAGAGTgg Zbtb48; Hkr3; Tzap mmu-miR-201 7 27 uCUUGUUACGGAAUGACUCau ||:||: ||:| |||||| tGAGCAGCGCTTCACTGAGaa Zbtb48; Hkr3; Tzap mmu-miR-214 82 114 GACGGAC-AGACAC------GGA-----CGACA ||||| | |||||| ||| ||||| CTGCCAGATCTGTGGCAAGACCTTCAAAGCTGT Zbtb48; Hkr3; Tzap mmu-miR-222 71 98 cuCUGGGUCA--UCGGUC--UACAUCGa | |||| | ||||| |||:|| agGCCCCACTTCTGCCAGATCTGTGGCa Zbtb48; Hkr3; Tzap mmu-miR-224 514 540 auuUGCCUUGGUGAU-----CACUGAAU || | |||| || |||||||| cccACTG-ACCAATAAACATGTGACTTA Zbtb48; Hkr3; Tzap mmu-miR-24* 195 217 ugacuauAGUCGAGUCAUCCGUG ||| || | |||||| ggcaggcTCACCTGCGGAGGCAC Zbtb48; Hkr3; Tzap mmu-miR-291a-3p 199 220 CCGUGUGUUUCACCUUCGUGAAa ||| ||| | |||:|||| | GGCTCAC-CTGCGGAGGCACATg Zbtb48; Hkr3; Tzap mmu-miR-292-3p 178 201 uguGA-GUUUUGGACCGCCGUgaa || |||: :| |||||| tggCTACAAGTTCACGCGGCAggc Zbtb48; Hkr3; Tzap mmu-miR-293 178 200 uguGAUGUUUGAG-ACGCCGUga ||||||::|| |||||| tggCTACAAGTTCACGCGGCAgg Zbtb48; Hkr3; Tzap mmu-miR-296 323 343 uGUCCUAACUCCCCCCCGGGA ||| ||: || ||||:|| gCAGACCTGGAGGTGGGCTCT Zbtb48; Hkr3; Tzap mmu-miR-298 63 86 ccuUCUUGUC--GGGAGGAGACGG ||::||| ||| |:|||||| aagAGGGCAGGCCCCACTTCTGCC Zbtb48; Hkr3; Tzap mmu-miR-300 416 442 CUUCUCUCGAA-----CGGGAACGUAu ||:|||||||| ||||| ||:| GAGGAGAGCTTTGCTAGCCCTGGCGTc Zbtb48; Hkr3; Tzap mmu-miR-301b 109 135 aCGAAAC--UGUU-AUGGUAACGUGac ||| || |||: ||| | ||||| aGCTGTGGAACAGTTACGAGTGCACgt Zbtb48; Hkr3; Tzap mmu-miR-302 519 546 AGUGGU--UUUGUAC-CU---UCGUGAAu | |||| ||||||| || ||||||| TGACCAATAAACATGTGACTTAGCACTT- Zbtb48; Hkr3; Tzap mmu-miR-302b 518 546 GA-UGAU--UUUGUAC-C---UUCGUGAA || || | ||||||| | ||||||| CTGACCAATAAACATGTGACTTAGCACTT Zbtb48; Hkr3; Tzap mmu-miR-302c 515 546 GGUGAC------UUUGUAC-CU---UCGUGAAc |||||| ||||||| || ||||||| CCACTGACCAATAAACATGTGACTTAGCACTT- Zbtb48; Hkr3; Tzap mmu-miR-302d 198 219 UGUGAGUUUGUACCUUCGUGaa | :|||| :: |||:|||| AGGCTCACCTGCGGAGGCACat Zbtb48; Hkr3; Tzap mmu-miR-30e* 4 27 GACAUUUGUAG---GCUGACUUUc ||||:|:|| | : |||||:| CTGTGAGCAGCGCTTCACTGAGAa Zbtb48; Hkr3; Tzap mmu-miR-324-3p 320 338 GGUCGUCGUGGACCCCGUCACC || |||| |||| || :|||| CCTGCAG-ACCT--GGAGGTGG Zbtb48; Hkr3; Tzap mmu-miR-326 320 335 uGACCUCCUUCCCGGGUCUCC ||| || | ||::|||| cCTGCAG--A---CCTGGAGG Zbtb48; Hkr3; Tzap mmu-miR-328 7 34 ugcCUUCCC---GU--CUC-UCCCGGuc | || | || ||| |||||| tgaGCAGCGCTTCACTGAGAAGGGCCcc Zbtb48; Hkr3; Tzap mmu-miR-328 40 73 ugCCUU---CCCGUC---------UCUCCCGguc || | || ||| ||||||| gaGGCATGTGGCCAGCCGCCATCAAGAGGGCagg Zbtb48; Hkr3; Tzap mmu-miR-339 346 376 ACUCGAG---GACCUC-----CU--GUCCCu |||| || ||||| || ||||| TGAGGTCATTGTGGAGTCCCTGACCCAGGGt Zbtb48; Hkr3; Tzap mmu-miR-342 134 157 CUGCCCACGCUAAAGACACACUCU | | || | | |||||||| GTCAGGCGACACAAAGGTGTGAGA Zbtb48; Hkr3; Tzap mmu-miR-346 46 75 uCUCC-GUCCGUG--AG----CCCGUCUGu | || ||| |:| || ||||||:| tGTGGCCAGCCGCCATCAAGAGGGCAGGCc Zbtb48; Hkr3; Tzap mmu-miR-351 347 376 gUCCGAGUUUC-CC---GAG---GAGUCCCu ||| ||| | || | | | ||||| gAGG-TCATTGTGGAGTCCCTGACCCAGGGt Zbtb48; Hkr3; Tzap mmu-miR-351 324 352 GUCCGAGUUU---CCCGAG--GAGUCCcu ||| | :::| |||||| || ||| CAGACCTGGAGGTGGGCTCTGCTGAGGtc Zbtb48; Hkr3; Tzap mmu-miR-362 461 485 aAGUGUGGAU-CCAA-GGUUCCUaa |||| ||: ||| ||:|||| aTCACCGCTGCTGTTCCCGAGGAct Zbtb48; Hkr3; Tzap mmu-miR-370 49 74 uuGGUCCAAGGUGG---GGUCGUCCG |||| |||:| :|||||| ggCCAGCCGCCATCAAGAGGGCAGGC Zbtb48; Hkr3; Tzap mmu-miR-412 328 351 uGCCGAUCACCUG-GUCCACUUCA | | :||||:| | | |||:|| cCTGGAGGTGGGCTCTGCTGAGGT Zbtb48; Hkr3; Tzap mmu-miR-422b 377 397 CCGGAAGACUGA-GGUUCAGGuc ||||| || || |||| ||| GGCCT--TGCCTCCCAACTCCct Zbtb48; Hkr3; Tzap mmu-miR-423 6 27 gACUC--CCCGGAGUCUGGCUCga |||| | ||:|| ||:||| gTGAGCAGCGCTTC--ACTGAGaa Zbtb48; Hkr3; Tzap mmu-miR-425 460 481 ccgccuGUG-CUGUAAGGGCUa |:| | ::||||||| catcacCGCTGCTGTTCCCGAg Zbtb48; Hkr3; Tzap mmu-miR-431 81 103 gGACGUACU-GCCGGACGUUCUGu |||| || | | : ||||||| tCTGCCAGATCTG-TGGCAAGACc Zbtb48; Hkr3; Tzap mmu-miR-433-5p 188 209 cuuauuaCUGUCCGAGUGGcau |:|||||||||| ttcacgcGGCAGGCTCACCtgc Zbtb48; Hkr3; Tzap mmu-miR-450b* 465 481 uaCGUACGUUUUACAAGGGUUa || ||| |||||||:| ccGC-TGC----TGTTCCCGAg Zbtb48; Hkr3; Tzap mmu-miR-455-3p 466 489 ucacauAUACGGGCACCUGACgua |:| |||| |||||| cgctgcTGTTCCCGAGGACTGtga Zbtb48; Hkr3; Tzap mmu-miR-455-5p 192 220 GCUACAUC--AG-----GUUUCCGUGUAu || | || || |::|||||||| CGCGGCAGGCTCACCTGCGGAGGCACATg Zbtb48; Hkr3; Tzap mmu-miR-465-3p 18 40 AGAUGAAUCUUUCC--GGGAcuag || ||| ||||:|| |||| TC-ACTGAGAAGGGCCCCCTtctg Zbtb48; Hkr3; Tzap mmu-miR-484 340 368 uAGCC--CUCCCCUGA---CUC--GGACU || | |||| |:| ||| ||||| cTCTGCTGAGGTCATTGTGGAGTCCCTGA Zbtb48; Hkr3; Tzap mmu-miR-484 327 345 UAGCCCUCCCCUGACUCG-GACu | | ||||| ||:|| ||| ACCTGGAGG----TGGGCTCTGc Zbtb48; Hkr3; Tzap mmu-miR-490 352 377 GUCGUACCUCA-GGA---GGUCCAAC || ::|||||| ||| ||||| || CATTGTGGAGTCCCTGACCCAGGGTG Zbtb48; Hkr3; Tzap mmu-miR-491 58 80 GG-AGUACCUUC--CCAAGGGGUGA || ||| | ::| || ||||||| CCATCAAGAGGGCAGG--CCCCACT Zbtb48; Hkr3; Tzap mmu-miR-491 16 37 GGAGU-AC-CUUCCCAAGGGGuga |:||| || |||||| |||| CTTCACTGAGAAGGG--CCCCctt Zbtb48; Hkr3; Tzap mmu-miR-497 322 350 AUGUUUGG--UGUCAC-----ACGACgac |:||:||| : :||| ||||| TGCAGACCTGGAGGTGGGCTCTGCTGagg Zbtb48; Hkr3; Tzap mmu-miR-501* 358 381 guUUAGGAAC-GGG-CCCACguaa |:||| || ||| ||||| ggAGTCCCTGACCCAGGGTGgcct Zbtb48; Hkr3; Tzap mmu-miR-503 452 473 cgucaugacaAG-GGCGACGAu || |||||||| tctctcatcaTCACCGCTGCTg Zbtb48; Hkr3; Tzap mmu-miR-540 351 371 gGUCCUAGCU-GGAGACUGGa || :| || :| |||||| tCATTGTGGAGTCCCTGACCc Zbtb48; Hkr3; Tzap mmu-miR-542-5p 212 232 gcacUGUACUACUAGGGGCUc |||||: ||||| ||| aggcACATGGAGATCCACGAc Zbtb48; Hkr3; Tzap mmu-miR-542-5p 238 257 gCACUGUACUACUAGGGGCuc | || | | ||||||| gGAGA-ACTACAATCCCCGgc Zbtb48; Hkr3; Tzap mmu-miR-543 162 180 ucuUCACGUGGCGCUUACAaa ||||||| |||:||| tcgAGTGCAC--CGAGTGTgg Zbtb48; Hkr3; Tzap mmu-miR-652 427 445 ACGUGUUGGGAUCACCGCGGUAa ||| :|:||| |||||:| | TGC-TAGCCC---TGGCGTCCTg Zbtb48; Hkr3; Tzap mmu-miR-665 427 447 auuccCUGGAGUCGGAGGACCa | ||| :|| |||||| tgctaGCCCT-GGCGTCCTGGa Zbtb48; Hkr3; Tzap mmu-miR-666 307 322 CCGAGAGUGUCGACACGGGCGA ||||||| || |||| || GGCTCTC-CA-----GCCCCCT Zbtb48; Hkr3; Tzap mmu-miR-668 331 353 CCAUCACCCGGCUCGGCUCACUGU || :||||||: ||:||| | || GGAGGTGGGCTCTGCTGAG-GTCA Zbtb48; Hkr3; Tzap mmu-miR-671 310 345 gGAGGUC-GGGGAGGU-----------CCCGAagga |||||| ||||| || ||||| tCTCCAGCCCCCTGCAGACCTGGAGGTGGGCTctgc Zbtb48; Hkr3; Tzap mmu-miR-673 392 413 GAGGUUCCUGGUCUC-GACACuc |||| | |||||| ||||| CTCCCTAG-CCAGAGACTGTGtt Zbtb48; Hkr3; Tzap mmu-miR-675-5p 44 63 ugACACCCGGGAAAGGC-GUGGU ||||| || ||| ||:|| caTGTGG--CC-AGCCGCCATCA Zbtb48; Hkr3; Tzap mmu-miR-676* 335 362 CGUUC-AG--GAUUCC---AACAUCUCA |:::| || ||:||| ||||:|||| GTGGGCTCTGCTGAGGTCATTGTGGAGT Zbtb48; Hkr3; Tzap mmu-miR-678 384 407 GGAGG--UCAGGAACGUGG-CUCUG ||||| | ||| | :|| ||||| CCTCCCAACTCCCT-AGCCAGAGAC Zbtb48; Hkr3; Tzap mmu-miR-683 177 200 CUCCUGUGUCGAA---UGUCGUCC | || :||| || :|:||||| GTGGCTACAAGTTCACGCGGCAGG Zbtb48; Hkr3; Tzap mmu-miR-684 228 245 aaCUGAACUUCCCUUUUGA ||| ||: |||:|||| acGAC-AGAGTGGAGAACT Zbtb48; Hkr3; Tzap mmu-miR-685 381 406 cACGGAGUG--GAG---UCGGUAACU |||||| | ||| ||||| || tTGCCTCCCAACTCCCTAGCCAGAGA Zbtb48; Hkr3; Tzap mmu-miR-686 199 218 agaAGUGGCAGAC-CCUUCGUua |||| ||| |||:||| ggcTCAC---CTGCGGAGGCAca Zbtb48; Hkr3; Tzap mmu-miR-693-3p 79 114 aAUGUCGGUGUAGAC-------------UUUCGACg | | |||| ||||| ||||||| cTTCTGCCAGATCTGTGGCAAGACCTTCAAAGCTGt Zbtb48; Hkr3; Tzap mmu-miR-693-5p 154 183 CUUUUGAAAGC--------CU-ACACCGAc ||:|| |||| || ||||||| GAGAAAGTTCGAGTGCACCGAGTGTGGCTa Zbtb48; Hkr3; Tzap mmu-miR-693-5p 292 311 CUUUUGAAAGCCUACACCGAc |||:| | :|| |||||| GAAGA-TGGTGGTCGTGGCTc Zbtb48; Hkr3; Tzap mmu-miR-695 68 92 aaGUC---AGUGGAUACGGGUUAGA ||| |||:| |||| :|||| ggCAGGCCCCACTTCTGCCAGATCT Zbtb48; Hkr3; Tzap mmu-miR-696 205 221 GGGUGUCGUUCGUGUGCg ||::|:| |:|||||:| CCTGCGG-AGGCACATGg Zbtb48; Hkr3; Tzap mmu-miR-699 366 386 gCUCGGU-CCAGCGUGACGGA || ||| ||| || :||||| tGACCCAGGGTGGCCTTGCCT Zbtb48; Hkr3; Tzap mmu-miR-702 326 341 CUCGCCCCAUUUCCCACCCGu || | || | ||||||| GACCTGG----A-GGTGGGCt Zbtb48; Hkr3; Tzap mmu-miR-704 202 223 gauccuCGUCU-CGUGUACaga ||:|| ||||||| tcacctGCGGAGGCACATGgag Zbtb48; Hkr3; Tzap mmu-miR-705 366 392 AC-GGGU------GGGGUGGAGGGUgg || |||| ||:::||||||| TGACCCAGGGTGGCCTTGCCTCCCAac Zbtb48; Hkr3; Tzap mmu-miR-709 490 508 aggaggacGGAGACGGagg || ||||| cacgtagaCCCCTGCCcgg Zbtb48; Hkr3; Tzap mmu-miR-710 311 332 GAGUUGAGAGGGGUUCUGAACC ||| | | ||: |||| ||| CTCCAGCCCCCTGCAGACCTGG Zbtb48; Hkr3; Tzap mmu-miR-711 422 444 gaauguaGAGAGGGGCC-CAGGg || |||:|| |||| agctttgCTAGCCCTGGCGTCCt Zbtb48; Hkr3; Tzap mmu-miR-712* 324 346 GUUGUGGGCCCCCA-CUGAG-CGu ||: |||:|| ||| |:||| || CAG-ACCTGGAGGTGGGCTCTGCt Zbtb48; Hkr3; Tzap mmu-miR-715 203 223 GUGCGCCCCCACACGUG--CCUC ||| | | || | |||| |||| CAC-CTGCGGAG-GCACATGGAG Zbtb48; Hkr3; Tzap mmu-miR-717 325 349 UCU---CUUCCA-UAGAGACAGACUC ||| |:|||| : ||||| ||||| AGACCTGGAGGTGGGCTCTG-CTGAG Zbtb48; Hkr3; Tzap mmu-miR-742 365 383 aAAUGGGUCGUACCACCGAAAg | |||||| |||||| || cTGACCCAG---GGTGGCCTTg Zbtb48; Hkr3; Tzap mmu-miR-744 299 325 CGACA--AUCGGGA--UCGGGG--CGU |: || |:||:|| |||||| ||| GTGGTCGTGGCTCTCCAGCCCCCTGCA Zbtb48; Hkr3; Tzap mmu-miR-761 452 474 ACACAGUCAAAGUGG-GACGACg | | ||| ||||| |||||| TCTCTCATCATCACCGCTGCTGt Zbtb48; Hkr3; Tzap mmu-miR-762 297 320 cgagaCAGGGCC--GGGGUCGGGG ||| :|| |:|||||||| tggtgGTCGTGGCTCTCCAGCCCC Zbtb48; Hkr3; Tzap mmu-miR-763 75 94 cGGUGACCAAGAAGGGUC--GACc |||| ||| | |||| ||| cCCAC---TTC-TGCCAGATCTGt Zbtb48; Hkr3; Tzap mmu-miR-764-3p 51 78 uGUCAACGGU-GAU------ACCGGAGGa ||| |||| | | |||| || cCAGCCGCCATCAAGAGGGCAGGCC-CCa Zbtb48; Hkr3; Tzap mmu-miR-770-3p 184 206 GGUCGAG-GUGCAGUCCGGGUGc | ||:|| |:|| |||||:||| CAAGTTCACGCGGCAGGCTCACc Zbtb48; Hkr3; Tzap mmu-miR-93 1 20 gaugGACGUGCUUGUCGUGAAac ||| :||:||||:||| -attCTG--TGAGCAGCGCTTca

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Zbtb48 RAID00881345 mmu-miR-325-3p miRNA MIMAT0004640 Zbtb48 mRNA 100090 Prediction 0.1828 Zbtb48 RAID01585133 mmu-miR-224-5p miRNA MIMAT0000671 Zbtb48 mRNA 100090 Prediction 0.1828 Zbtb48 RAID03748283 mmu-mir-325 miRNA MI0000597 Zbtb48 mRNA 100090 Prediction 0.1828