DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Pex10 | mmu-miR-1960 | beg:427 | end:443 | pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |||| |||||||| &5' ---------CTAAGAGCACTGG 3' |
Pex10 | mmu-miR-345-3p | beg:257 | end:275 | pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& ||.|||| |||||||| &5' --CTTCAGA-----AGTTCAGG 3' |
Pex10 | mmu-miR-590-5p | beg:83 | end:102 | pic:3' GACGTGAAAATACT-TATTCGAG 5'& |||||.| ||||||| &5' -----CTTTTGTCACATAAGCT- 3' |
Pex10 | mmu-miR-759 | beg:351 | end:361 | pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||||||| &5' --------------CACTCTG- 3' |
Pex10 | mmu-miR-1943 | beg:217 | end:236 | pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& || ||.. |||||||| &5' ----GG-GCTTCC--CCTCCCTT 3' |
Pex10 | mmu-miR-432 | beg:0 | end:12 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& .|||||||| &5' --------------GCTCCAAGA 3' |
Pex10 | mmu-miR-546 | beg:300 | end:311 | pic:3' CTGAGGCACGGTGGTA 5'& |||||||| &5' --------GCCACCAT 3' |
Pex10 | mmu-miR-706 | beg:24 | end:41 | pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& || || || ||||||| &5' -----TG-GA-AGAGTTTCTC- 3' |
Pex10 | mcmv-miR-m01-1 | beg:26 | end:44 | pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& || |||||||| &5' ------GAAGAGTTTCTCCTC- 3' |
Pex10 | mcmv-miR-m108-1 | beg:26 | end:48 | pic:3' GCTGTGCTCGGT--GGCAGTCTTT 5'& || |||.. || |||||| &5' -GAA--GAGTTTCTCC-TCAGAA- 3' |
Pex10 | mcmv-miR-m21-1 | beg:379 | end:388 | pic:3' GCCGAACTTGCACAGGGGATA 5'& |||||| &5' --------------CCCCTA- 3' |
Pex10 | mghv-miR-M1-2 | beg:608 | end:631 | pic:3' TTTC-TCCCCCTCTCCCCCAGAC 5'& || ||| |.|||||||||| &5' --AGCAGGTAGGGAGGGGGTCT- 3' |
Pex10 | mmu-let-7a | beg:399 | end:426 | pic:3' TTGATATGTTGGATG--------ATGGAGT 5'& || |||| |.||||| &5' ------ACTCCCTAAGAAAATGATGCCTCA 3' |
Pex10 | mmu-let-7b | beg:243 | end:265 | pic:3' TTGGTGTGTTGGA---TGATGGAGT 5'& |||||.|. |||.|.||| &5' ----ACACAGCTGAGCACTGCTTCA 3' |
Pex10 | mmu-let-7b | beg:404 | end:426 | pic:3' TTGGTGTGTTGGATG--------ATGGAGT 5'& |||| |.||||| &5' ----------CCTAAGAAAATGATGCCTCA 3' |
Pex10 | mmu-let-7c | beg:249 | end:265 | pic:3' TTGGTATGTTGGATGATGGAGT 5'& .| | |||.|.||| &5' --------GAGC-ACTGCTTCA 3' |
Pex10 | mmu-let-7c | beg:395 | end:426 | pic:3' TTGGTATGTTGGATG--------ATGGAGT 5'& .||| || |||| |.||||| &5' -GCCA-ACTCCCTAAGAAAATGATGCCTCA 3' |
Pex10 | mmu-let-7e | beg:416 | end:426 | pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||||| &5' ---------------TGCCTCA 3' |
Pex10 | mmu-let-7f | beg:416 | end:426 | pic:3' TTGATATGTTAGATGATGGAGT 5'& |.||||| &5' ---------------TGCCTCA 3' |
Pex10 | mmu-let-7g | beg:410 | end:426 | pic:3' TTGACATGTTTGATGATGGAGT 5'& |||. |.||||| &5' --------AAATGA-TGCCTCA 3' |
Pex10 | mmu-let-7g | beg:245 | end:265 | pic:3' TTGACATGTTTGATGATGGAGT 5'& |.||| |.| |||.|.||| &5' AGCTG----AGC-ACTGCTTCA 3' |
Pex10 | mmu-let-7i | beg:407 | end:426 | pic:3' TTGTCGTGTTTGATGATGGAGT 5'& || |||. |.||||| &5' ---AGA--AAATGA-TGCCTCA 3' |
Pex10 | mmu-miR-1190 | beg:237 | end:254 | pic:3' CTGTCTCCCCTTGGA--GTCGACT 5'& |.|| ||||||| &5' ----------AGCCACACAGCTGA 3' |
Pex10 | mmu-miR-1195 | beg:308 | end:330 | pic:3' ACTCGTCCGA--CCGGAGCTTGAGT 5'& |.|||| ||| |..|||| &5' ----CGGGCTGAGGCA--GGGCTCA 3' |
Pex10 | mmu-miR-1224 | beg:226 | end:248 | pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| |.|||| || || ||| &5' CTCC-CTTCCCAAG-CCACAC 3' |
Pex10 | mmu-miR-143 | beg:591 | end:606 | pic:3' CTCGATGTCACGAAGTAGAGT 5'& .|| ||||||||. &5' -------GGT-CTTCATCTT- 3' |
Pex10 | mmu-miR-146bstar | beg:303 | end:327 | pic:3' TGGT--CTTGACTCAGGGATCCCG 5'& |||| |..||||| | ||||| &5' ACCATCGGGCTGAGG--C-AGGGC 3' |
Pex10 | mmu-miR-150 | beg:154 | end:175 | pic:3' GTGACCATGTTCCCAACCCTCT 5'& ||| .||| ||||||| &5' ---TGGGGGTGGGG-TGGGAGA 3' |
Pex10 | mmu-miR-150star | beg:273 | end:298 | pic:3' GATAGG--GGGTCCGGACATGGTC 5'& |.|. |.|||||||||| || &5' -TGTTTTACTCAGGCCTGTAA-AG 3' |
Pex10 | mmu-miR-182 | beg:386 | end:403 | pic:3' GCCACACTCAAGATGG---TAACGGTTT 5'& ||| .||||||| &5' -------------ACCCATGTTGCCAA- 3' |
Pex10 | mmu-miR-1892 | beg:220 | end:241 | pic:3' TAGGA-GGGAGGGCAGGGGTTTA 5'& |.| ||||||| |.|||||. &5' --CTTCCCCTCCC-TTCCCAAG- 3' |
Pex10 | mmu-miR-1896 | beg:417 | end:430 | pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& .|| ||||||. &5' ----------GCC-TCAGAGG- 3' |
Pex10 | mmu-miR-1937a | beg:498 | end:513 | pic:3' ACCCCCGAGCAGGCCCTAA 5'& || |.||||| &5' ------CTATGCTGGGAT- 3' |
Pex10 | mmu-miR-1944 | beg:41 | end:63 | pic:3' TTAGTCTTGA-ACTGTAAGTCGTGTCTC 5'& |||||||| ||.| ||||||| &5' --TCAGAACTGTGGCT----GCACAGA- 3' |
Pex10 | mmu-miR-1949 | beg:513 | end:533 | pic:3' TTGATACGACTGTAGGACCATATC 5'& |||| |.|||||.|. &5' ----ATGCCCT--TTCTGGTGTG- 3' |
Pex10 | mmu-miR-1952 | beg:149 | end:167 | pic:3' GTCTTCCTCCCACCTCT 5'& ||| |.||||||.| &5' CAGTATGGGGGTGGGG- 3' |
Pex10 | mmu-miR-1952 | beg:607 | end:628 | pic:3' GTCTTCC-TCCCACCTCT 5'& .|| ||| |||| ||.|. &5' TAGCAGGTAGGGAGGGGG 3' |
Pex10 | mmu-miR-1954 | beg:432 | end:454 | pic:3' TTGTC-CCAGAGTGAGACGTCA 5'& |.|| || . ||||||| &5' AGCACTGGA--TGTTCTGCAG- 3' |
Pex10 | mmu-miR-1955 | beg:499 | end:513 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& .|| ||||||. &5' -------------TATGCTGGGAT- 3' |
Pex10 | mmu-miR-1957 | beg:176 | end:199 | pic:3' CAGTATACG--AGATGGTGAC 5'& |||| |||. |.||| .|| &5' GTCACATGTAATTTACAGCT- 3' |
Pex10 | mmu-miR-1960 | beg:237 | end:260 | pic:3' TCGGGAGAA-GATTGTCGTGACC 5'& |||| ||. ||||||| &5' AGCCACACAGCTG--AGCACTG- 3' |
Pex10 | mmu-miR-1961 | beg:247 | end:265 | pic:3' AAGATTGATGATGGAGT 5'& ||.| |||.|.||| &5' --CTGAGCACTGCTTCA 3' |
Pex10 | mmu-miR-1961 | beg:411 | end:426 | pic:3' AAGATTGATGATGGAGT 5'& ||. |.||||| &5' ----AATGA-TGCCTCA 3' |
Pex10 | mmu-miR-1969 | beg:589 | end:606 | pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& ||.||||.|||||| &5' ---------AAGGTCTTCATCTT 3' |
Pex10 | mmu-miR-1982.1 | beg:154 | end:173 | pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||.| |.|||||.|| &5' ---TGGGGG----TGGGGTGGGA 3' |
Pex10 | mmu-miR-1982.2 | beg:154 | end:171 | pic:3' GACACCCTCTTGTATCCCACT 5'& ||||.| |.|||||. &5' ---TGGGGG----TGGGGTGG 3' |
Pex10 | mmu-miR-1982star | beg:220 | end:241 | pic:3' GGAGGGGTCCTGGGAGGGTT 5'& |.||||| ||.|||||| &5' CTTCCCCTC--CCTTCCCAA 3' |
Pex10 | mmu-miR-199a-5p | beg:424 | end:443 | pic:3' CTTGTCCATCAGACTTGTGACCC 5'& ||| ||.|||||| &5' ----AGGCTAA--GAGCACTGG- 3' |
Pex10 | mmu-miR-199bstar | beg:421 | end:443 | pic:3' CTTGTCCATCAGATT--TGTGACCC 5'& ||| .| |||| .|||||| &5' ---CAGA-GG-CTAAGAGCACTGG- 3' |
Pex10 | mmu-miR-204 | beg:327 | end:348 | pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||| ||||| || .||||||| &5' AGG-ATAGGCTG--GAAGGGAA 3' |
Pex10 | mmu-miR-211 | beg:326 | end:348 | pic:3' TCCGTTTCCTA-CTG--TTTCCCTT 5'& ||||| |.| .||||||| &5' ------AGGATAGGCTGGAAGGGAA 3' |
Pex10 | mmu-miR-214star | beg:311 | end:338 | pic:3' CGTG-TCGTTCACA--TCTGTCCGT 5'& || .|||.| .||.|||| &5' GCTGAGGCAGGGCTCAGGATAGGC- 3' |
Pex10 | mmu-miR-214star | beg:524 | end:539 | pic:3' CGTGTCGTTCACATCTGTCCGT 5'& .|||| .|||||| &5' --------GGTGT--GCAGGCA 3' |
Pex10 | mmu-miR-21 | beg:75 | end:103 | pic:3' AGTTGTAGT----CAGACTATTCGAT 5'& || |.|. ||| |||||||| &5' -CACCGTTCTTTTGTCACATAAGCTA 3' |
Pex10 | mmu-miR-2183 | beg:611 | end:632 | pic:3' TCC-TCCAGTCCCCA-AGTT 5'& ||| ||| .||||| || &5' AGGTAGGGAGGGGGTCTC-- 3' |
Pex10 | mmu-miR-2183 | beg:261 | end:281 | pic:3' TCCTCCAGTCCC-CAAGTT 5'& || || |||||| |||. &5' AGAAGTTCAGGGTGTTT-- 3' |
Pex10 | mmu-miR-27bstar | beg:351 | end:366 | pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& |||. ||..|||| &5' ---CACT------CTGGGCTC- 3' |
Pex10 | mmu-miR-302c | beg:239 | end:259 | pic:3' GGTGACTTTGTACCTTCGTGAA 5'& |||| ||| .|||||| &5' CCAC----ACAGCTGAGCACT- 3' |
Pex10 | mmu-miR-302c | beg:423 | end:441 | pic:3' GGTGACTTTGTACCTTCGTGAA 5'& ||..| .|||||| &5' -----GAGGCTAA-GAGCACT- 3' |
Pex10 | mmu-miR-302d | beg:426 | end:450 | pic:3' TGTGAG-TTTGT-ACCTTCGTGAAT 5'& .|| .|.|| |||| |. || &5' --GCTAAGAGCACTGGATGTTCT-- 3' |
Pex10 | mmu-miR-3072 | beg:608 | end:629 | pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& || |||. ||||||||. &5' AGCAGGTAG---GGAGGGGGT- 3' |
Pex10 | mmu-miR-30astar | beg:332 | end:344 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |.|||.||| &5' -------------GGCTGGAAG 3' |
Pex10 | mmu-miR-30estar | beg:332 | end:344 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& |.|||.||| &5' -------------GGCTGGAAG 3' |
Pex10 | mmu-miR-326 | beg:311 | end:332 | pic:3' TGACCTCCTTCCCGGGTCTCC 5'& .|| |||| |||||.|||. &5' GCT-GAGGCAGGGCTCAGG-- 3' |
Pex10 | mmu-miR-338-3p | beg:490 | end:511 | pic:3' GTTGTTTTAGTGACTACGACCT 5'& |||| ||. |||||||. &5' --ACAAC--CATCTATGCTGGG 3' |
Pex10 | mmu-miR-342-5p | beg:360 | end:383 | pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& |||| ||| ||.||||| &5' CTCACCAACACC-AGTACCCC- 3' |
Pex10 | mmu-miR-343 | beg:612 | end:628 | pic:3' AGACCCGTGTACTTCCCTCT 5'& ||.| |.||||.| &5' ----GGTAG--GGAGGGGG- 3' |
Pex10 | mmu-miR-345-5p | beg:111 | end:134 | pic:3' TTCGTGACCTGA-----TCCCCAGTCG 5'& ||||| .|||||||| &5' -----CTGGAAAAAAGGGGGGGTCAG- 3' |
Pex10 | mmu-miR-34a | beg:238 | end:262 | pic:3' TGTTG-GTCGATTCTGTGACGGT 5'& .| || |||||.|| ||||||. &5' GCCACACAGCTGAG-CACTGCT- 3' |
Pex10 | mmu-miR-34b-5p | beg:244 | end:263 | pic:3' TGTTAGTCGATTAATGTGACGGA 5'& |||||.| .||||||.| &5' -----CAGCTGA--GCACTGCTT 3' |
Pex10 | mmu-miR-34c | beg:244 | end:263 | pic:3' CGTTAGTCGATTGATGTGACGGA 5'& |||||.| .||||||.| &5' -----CAGCTGA--GCACTGCTT 3' |
Pex10 | mmu-miR-361 | beg:501 | end:518 | pic:3' CATGGGGACCTCTAAGACTATT 5'& . |||| || ||||||. &5' ----TGCTGG-GA-TCTGATG- 3' |
Pex10 | mmu-miR-370 | beg:599 | end:618 | pic:3' TGGTCCAAGGTG-GGGTCGTCCG 5'& ||. ||.||||||. &5' -------TCTTGGCCTAGCAGGT 3' |
Pex10 | mmu-miR-376astar | beg:19 | end:42 | pic:3' TGAGTATCTTCCTCTTAGATGG 5'& ||||||.||| ||| ||| || &5' ACTCATGGAA-GAGTTTCT-CC 3' |
Pex10 | mmu-miR-449b | beg:244 | end:263 | pic:3' CGGTCGATTGTTGTGACGGA 5'& |||||.| .||||||.| &5' --CAGCTGA--GCACTGCTT 3' |
Pex10 | mmu-miR-450b-5p | beg:281 | end:298 | pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||| |||.|||. &5' ---TCAGGC-----CTGTAAAG 3' |
Pex10 | mmu-miR-470 | beg:0 | end:13 | pic:3' TGAGTGGTCACGGTC-AGGTTCTT 5'& ||| |||||||| &5' ------------CAGCTCCAAGAA 3' |
Pex10 | mmu-miR-491 | beg:20 | end:44 | pic:3' GGAGTACCTTC-CCAAGGGGTGA 5'& |||||||||| | |||.|| | &5' -CTCATGGAAGAGTTTCTCCTC- 3' |
Pex10 | mmu-miR-532-3p | beg:151 | end:174 | pic:3' ACGT-TCGGAACCCACACCCTCC 5'& |.| .| |||| ||||||| &5' -GTATGGGGGTGGG-GTGGGAG- 3' |
Pex10 | mmu-miR-539 | beg:21 | end:42 | pic:3' TGTGTGGTTCCTA-TTAAAGAGG 5'& || .|| ||| |.||||||| &5' --AC-TCATGGAAGAGTTTCTCC 3' |
Pex10 | mmu-miR-542-3p | beg:163 | end:185 | pic:3' AAAGTCAATAG-TTAGACAGTGT 5'& .|| |.||||||||| &5' ----GGTGGGAGAGTCTGTCACA 3' |
Pex10 | mmu-miR-544 | beg:436 | end:456 | pic:3' CTCGAACGATTTTT---ACGTCTTA 5'& ||..| ||||||| &5' -------CTGGATGTTCTGCAGAA- 3' |
Pex10 | mmu-miR-544 | beg:524 | end:542 | pic:3' CTCGAACGATTTTTACGTCTTA 5'& .|. ||| |||||| &5' -GGTGTGCAG-----GCAGAA- 3' |
Pex10 | mmu-miR-669a | beg:238 | end:252 | pic:3' TGTACTTGTACGTGTGTGTTGA 5'& || ||||||.|| &5' ----------GC-CACACAGCT 3' |
Pex10 | mmu-miR-669l | beg:238 | end:252 | pic:3' TGTATATGTACGTGTGTGTTGA 5'& || ||||||.|| &5' ----------GC-CACACAGCT 3' |
Pex10 | mmu-miR-673-3p | beg:10 | end:31 | pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| |..||||||| .||| &5' -GTGGATGGAACTCA----TGGA 3' |
Pex10 | mmu-miR-682 | beg:40 | end:59 | pic:3' GTCTGAAGTGACACTGACGTC 5'& |||| ||||||.||||| &5' CAGA----ACTGTGGCTGCA- 3' |
Pex10 | mmu-miR-684 | beg:137 | end:152 | pic:3' AACTGAACTTCCCTTTTGA 5'& | .|||||||.| &5' -------GTGGGGAAAATT 3' |
Pex10 | mmu-miR-687 | beg:313 | end:336 | pic:3' AGTAACGA---CGTAA-G-GTCCTATC 5'& ||| ||| | |||||||| &5' -----GCTGAGGCAGGGCTCAGGATAG 3' |
Pex10 | mmu-miR-693-5p | beg:39 | end:57 | pic:3' CTTTTGAAAGCCT--ACACCGAC 5'& || || |||||||| &5' --------TCAGAACTGTGGCTG 3' |
Pex10 | mmu-miR-696 | beg:468 | end:486 | pic:3' GGGTGTCGTTCGTGTGCG 5'& || |||||. |||||| &5' -CC-CAGCAGCCACACG- 3' |
Pex10 | mmu-miR-764-5p | beg:243 | end:259 | pic:3' TCCTCCTGTACACTCGTGG 5'& ||| |||||||. &5' ------ACAGCTGAGCACT 3' |
Pex10 | mmu-miR-770-3p | beg:351 | end:368 | pic:3' GGTCGAGGTGCAG-TCCGGGTGC 5'& ||| || .|||.||| &5' -------CAC-TCTGGGCTCAC- 3' |
Pex10 | mmu-miR-770-3p | beg:475 | end:495 | pic:3' GGTCGAGGTGCAGTCCGGGTGC 5'& |||| |||| |||.||| &5' -CAGCCACACGGT-GGCTCAC- 3' |
Pex10 | mmu-miR-7b | beg:53 | end:78 | pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .| |||.|| .|.|| | |||| &5' GC-ACAGAAATATAAAACCTCCA 3' |
Pex10 | mmu-miR-873 | beg:482 | end:507 | pic:3' TCCTCTGAGTGTTCA-AGG-ACG 5'& || |.||||||| ||. ||| &5' -GGTGGCTCACAACCATCTATGC 3' |
Pex10 | mmu-miR-876-3p | beg:79 | end:106 | pic:3' ACTTAATGAAACA-----TTTGGTGAT 5'& .|| .||||| ||.|.|||| &5' ---GTTCTTTTGTCACATAAGCTACTA 3' |
Pex10 | mmu-miR-876-5p | beg:130 | end:154 | pic:3' ATCACTAAGTG--TCTC-TTTAGGT 5'& |.| || .|.| ||||.|| &5' ----GGTACAAGTGGGGAAAATTCA 3' |
Pex10 | mmu-miR-98 | beg:246 | end:265 | pic:3' TTGTTATGTTGAA---TGATGGAGT 5'& ||.|| |||.|.||| &5' -------CAGCTGAGCACTGCTTCA 3' |
Pex10 | mmu-miR-98 | beg:405 | end:426 | pic:3' TTGTTATGTTGAATGATGGAGT 5'& .|| ||. |.||||| &5' --TAAGAAAATGA--TGCCTCA 3' |