DNA & RNA Element - circBase circRNA ID Chrom Start End Strand mmu_circ_0001348 chr5 53241696 53241933 +

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000234 mmu-miR-201 52206 Anapc4 uuCUUGU-UA--CGGAAUGACUCAu |||:: || |:| ||||||| aaGAAUGUAUCGGUCACACUGAGUu 2 21 57 81 [mm9:5:53257915-53257939:+] 0.5722 150 7 -16.00 -0.4889 MIMAT0004632 mmu-miR-29c* 52206 Anapc4 cuugUGG-UCCUCUUUAGCCAGu ||: || | : ||||||| auggACUAAGAAUGUAUCGGUCa 2 19 50 72 [mm9:5:53257908-53257930:+] 0.5722 149 7 -18.34 -0.9955 MIMAT0002111 mmu-miR-470 52206 Anapc4 ugAGUGGUCACGGUCAGGUUCUu |:::| ||| :| || |||| agUUGUCUGUG-UA-UCAAAGAa 2 22 78 98 [mm9:5:53257936-53257956:+] 0.6474 121 0 -12.05 -0.1119 MIMAT0003472 mmu-miR-693-5p 52206 Anapc4 cuuuugaaagccUACACCGac ||||||| uuguguuaguuaAUGUGGCaa 3 10 16 36 [mm9:5:53257874-53257894:+] 0.4970 125 0 -9.75 -0.1232 MIMAT0003510 mmu-miR-717 52206 Anapc4 ucucuuccauagaGACAGACuc :|||||| cggucacacugagUUGUCUGug 3 10 67 88 [mm9:5:53257925-53257946:+] 0.6474 121 0 -12.30 -0.1431 MIMAT0004882 mmu-miR-466f-3p 52206 Anapc4 cacACAUACACACACACAUAc || :| ||| ||||||| cacUGAGU-UGUCUGUGUAUc 2 19 73 92 [mm9:5:53257931-53257950:+] 0.6474 156 7 -9.44 -0.9659 MIMAT0004883 mmu-miR-466g 52206 Anapc4 acacacACGUACACAGACAUa || :| |||||||: ucacacUGAGU-UGUCUGUGu 2 16 70 89 [mm9:5:53257928-53257947:+] 0.6474 133 0 -12.58 -0.1335 MIMAT0005834 mmu-miR-466i 52206 Anapc4 aucacACAUACACACACACAUa || :| ||| |||||| cacacUGAGU-UGUCUGUGUAu 2 18 71 91 [mm9:5:53257929-53257949:+] 0.6474 127 6 -10.04 -0.1115 MIMAT0005846 mmu-miR-467f 52206 Anapc4 acAUCCACACACACACAUAua |: || ||| ||||||| acUGAGU-UGUCUGUGUAUca 3 20 74 93 [mm9:5:53257932-53257951:+] 0.6474 141 0 -10.06 -0.4046 MIMAT0007873 mmu-miR-1896 52206 Anapc4 gaggAGUGGGUG-GUAGUCUCUc |:::|::: :|||| ||| ugagUUGUCUGUGUAUCAAAGAa 2 19 76 98 [mm9:5:53257934-53257956:+] 0.6474 121 0 -9.14 -0.1137 MIMAT0011286 mmu-miR-2182 52206 Anapc4 gcgcCGC-ACCCUUUACACCGca |:| | | |||||||| cauuGUGUUAGUUAAUGUGGCaa 3 19 14 36 [mm9:5:53257872-53257894:+] 0.5215 133 0 -14.90 -0.1413 MIMAT0000125 mmu-miR-23b 52206 Anapc4 ccAUUAGGGACCGUUACACUa | :| :: | :||||||: caUUGUGUUAGUUAAUGUGGc 2 20 14 34 [mm9:5:53257872-53257892:+] 0.5215 131 0 -9.51 -0.1541 MIMAT0000209 mmu-miR-129-5p 52206 Anapc4 cguUCGGGUCUGGCGUUUUUc ||:: | :: ||||||| guuAGUUAAUGUGGCAAAAAg 2 19 20 40 [mm9:5:53257878-53257898:+] 0.4970 150 7 -11.76 -0.4009 MIMAT0000224 mmu-miR-194 52206 Anapc4 agGUGUACCUCAAC-GACA-AUGu |||| |||||| |||| ||: guCACACUGAGUUGUCUGUGUAUc 2 21 69 92 [mm9:5:53257927-53257950:+] 0.6474 123 0 -21.42 -0.1406 MIMAT0000532 mmu-miR-23a 52206 Anapc4 ccuuUAGGGACCGUUACACUa :| :: | :||||||: cauuGUGUUAGUUAAUGUGGc 2 18 14 34 [mm9:5:53257872-53257892:+] 0.5215 129 0 -9.66 -0.1541

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G054253 Anapc4 Mus musculus 52206

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Anapc4 mmu-miR-201 beg:66 end:81 pic:3' TTCTTGTTACGGAATGACTCAT 5'& |.| ||||||| &5' ---------GTCACACTGAGT- 3' Anapc4 mmu-miR-29cstar beg:55 end:72 pic:3' CTTGTGGTCCTCTT---TAGCCAGT 5'& |||| |||||||| &5' ----------AGAATGTATCGGTCA 3' Anapc4 mmu-miR-129-5p beg:20 end:41 pic:3' CGTTCGGGTCTGGCGTTTTTC 5'& ||. | . |||||||| &5' ---AGTTAATGTGGCAAAAAG 3' Anapc4 mmu-miR-1928 beg:17 end:35 pic:3' CTCGACC-GTTACATCGA 5'& |.| | .|||||.|| &5' --GTTAGTTAATGTGGC- 3' Anapc4 mmu-miR-1959 beg:67 end:86 pic:3' GAG-GTGACTCGATGTAGGGG 5'& || |||||||.| .||. &5' -TCACACTGAGTT--GTCT-- 3' Anapc4 mmu-miR-1960 beg:0 end:19 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& ||| .|.||||||.|| &5' --CCCAGC-TTGACAGCATTG- 3' Anapc4 mmu-miR-31 beg:0 end:23 pic:3' GTCGATACGGTCGTAGAACGGA 5'& ||||| || ||||||. ||.. &5' CAGCT-TGACAGCATTGTGTT- 3' Anapc4 mmu-miR-376c beg:71 end:90 pic:3' TGCACTTTAAAGGAGATACAA 5'& || |||. |. |||.||| &5' AC-TGAG---TTGTCTGTGT- 3' Anapc4 mmu-miR-466g beg:76 end:90 pic:3' ACACACACGTAC-ACAGACATA 5'& | |||||||.| &5' -----------GTTGTCTGTGT 3' Anapc4 mmu-miR-713 beg:72 end:91 pic:3' CGACAC-ACGGAAGTCACGT 5'& ||| | ||.|| |||.| &5' -CTGAGTTGTCT---GTGTA 3' Anapc4 mmu-miR-881 beg:26 end:48 pic:3' AGATAA-GTCTTTTCTGTGTCAA 5'& |.| || |||||||..||| &5' --TGTGGCA-AAAAGACGTAGT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Anapc4; D5Ertd249e mmu-miR-128a 56 79 UUUUCUC---UGGCCAA-GUGACACU |||| |:|||| ||||| -UAAGAAUGUAUCGGUCACACUGA-- Anapc4; D5Ertd249e mmu-miR-128b 56 79 CUUUCUC---UGGCCAA-GUGACACU |||| |:|||| ||||| -UAAGAAUGUAUCGGUCACACUGA-- Anapc4; D5Ertd249e mmu-miR-134 41 76 GGGGAGACC-AGUUGG-----------UCAGUGU- | : ||| | :||: :|||||| ACGUAGUGGAUGGACUAAGAAUGUAUCGGUCACAC Anapc4; D5Ertd249e mmu-miR-136 88 108 AGGUAGUAGUUUUGUUUACCUCA :|||| :|||:|||||| -GUAUCAAAGAAAUAAAUGGU-- Anapc4; D5Ertd249e mmu-miR-141 1 25 -GGUAGAAAUGGUCUGU--CACAAU- ||| ||| ||| || |||||| CCCAGCUUGA-CAG-CAUUGUGUUAG Anapc4; D5Ertd249e mmu-miR-181a* 32 55 CCAUGUUAG-UUGC--CAGCUACCA :||| :||| || ||||| --GGCAAAAAGACGUAGUGGAUGGA Anapc4; D5Ertd249e mmu-miR-201 57 82 -UCUUGUUA---CGGAAUGACUCAU ||||:: |:| ||||||| AAGAAUGUAUCGGUCACACUGAGUU Anapc4; D5Ertd249e mmu-miR-222 17 49 CUCUGGGUCA------UCGG---UCUACAUCGA | ::||| :|| ||| ||||: -UGUGUUAGUUAAUGUGGCAAAAAGACGUAGUG Anapc4; D5Ertd249e mmu-miR-291b-3p 31 58 -CUGU----UUGUUUUACCUACGUGAAA |:|| :||: |:|||||| ||| UGGCAAAAAGACGUAGUGGAUGGACUA- Anapc4; D5Ertd249e mmu-miR-423 74 94 -GACUCCCCGGAGUC-UGGCUCGA ||||| |:|| | |:| ACUGAGUUGUCUGUGUAUCA---- Anapc4; D5Ertd249e mmu-miR-683 2 17 CUCCUGUGUCGAA-UGUCGUCC |||||| |||||| ------CCAGCUUGACAGCAU- Anapc4; D5Ertd249e mmu-miR-688 58 90 -CUUAU----UCA-------UCAGCGGACGCU ||||: :|| |||:|:|||:| AGAAUGUAUCGGUCACACUGAGUUGUCUGUGU Anapc4; D5Ertd249e mmu-miR-717 57 90 UCUCUUCCAUAGA-----------GACAGACUC- |||| ||||| :|||||| | -AAGAAUGUAUCGGUCACACUGAGUUGUCUGUGU Anapc4; D5Ertd249e mmu-miR-96 11 39 -UCGUUUUUACACGAUCA------CGGUUU- |||| ||||:|||| | |||| CAGCAU---UGUGUUAGUUAAUGUGGCAAAA Anapc4; D5Ertd249e mmu-miR-201 74 81 -------------------UCUUGUUA---CGGAAUGACUCAU ||||:: |:| ||||||| AGACGUAGUGGAUGGACUAAGAAUGUAUCGGUCACACUGAGUU Anapc4; D5Ertd249e mmu-miR-128a 58 80 UUUUCUCUGGCCA-AGUGACACu |:|| : |:|||| ||||| | AGAATGTATCGGTCACACTGAGt Anapc4; D5Ertd249e mmu-miR-128b 59 80 CUUUCUCUGGCCA-AGUGACACu ||| | |:|||| ||||| | GAATG-TATCGGTCACACTGAGt Anapc4; D5Ertd249e mmu-miR-134 53 74 ggggagaccaguUGGUCAGUGU |:|:|||||| gactaagaatgtATCGGTCACA Anapc4; D5Ertd249e mmu-miR-136 87 109 AGGUAGUAGUUUUGUUUACCuca | :|||| :|||:|||||| TGTATCAAAGAAATAAATGGtaa Anapc4; D5Ertd249e mmu-miR-141 2 23 GGUAGAAAUGGUCUGU--CACAAU ||| ||| | ||| || |||||| CCAGCTTGA-CAG-CATTGTGTTA Anapc4; D5Ertd249e mmu-miR-181b 1 32 GGGUGG--CUGUCG--------UUACUUACAa |||| | |||||| |:| ||||| CCCAGCTTGACAGCATTGTGTTAGTTAATGTg Anapc4; D5Ertd249e mmu-miR-222 38 68 cUCUGGGUCAUC-----GG-UC-UACAUCGa |||| :|||:| |: || ||||| | aAGACGTAGTGGATGGACTAAGAATGTATCg Anapc4; D5Ertd249e mmu-miR-291b-3p 32 58 CUGUU----UGUUUUACCUACGUGAaa |:||| ||: |:|||||| ||| GGCAAAAAGACGTAGTGGATGGACTaa Anapc4; D5Ertd249e mmu-miR-423 62 81 gacuccCCGGAGUCUGGCUCGA || ||| ||:|||:| tgtatcGG--TCACACTGAGTT Anapc4; D5Ertd249e mmu-miR-683 1 17 cuccuGUGUCGAA-UGUCGUcc | |||||| |||||| -----CCCAGCTTGACAGCAtt Anapc4; D5Ertd249e mmu-miR-688 70 89 cuuauucaUCAGCGGACGCu |||:|:|||:| tcacactgAGTTGTCTGTGt Anapc4; D5Ertd249e mmu-miR-717 56 88 ucUCUUCCAUAG--AG---------ACAGACuc |||| ||||| || |||||| taAGAATGTATCGGTCACACTGAGTTGTCTGtg Anapc4; D5Ertd249e mmu-miR-96 9 37 ucGUUUUUACACGAU------CACGGUUU ||: | ||||:|| ||| |||| gaCAGCATTGTGTTAGTTAATGTGGCAAA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Anapc4 RAID00296350 mmu-miR-7007-3p miRNA MIMAT0027919 Anapc4 mRNA 52206 Prediction 0.1828 Anapc4 RAID01023987 mmu-miR-194-5p miRNA MIMAT0000224 Anapc4 mRNA 52206 CLIP-seq//Prediction 0.6308 Anapc4 RAID02249440 mmu-miR-29c-5p miRNA MIMAT0004632 Anapc4 mRNA 52206 Prediction 0.1828 Anapc4 RAID02504096 mmu-miR-129-5p miRNA MIMAT0000209 Anapc4 mRNA 52206 CLIP-seq//Prediction 0.6308 Anapc4 RAID03009451 mmu-miR-23a-3p miRNA MIMAT0000532 Anapc4 mRNA 52206 CLIP-seq//Prediction 0.6308 Anapc4 RAID03284664 mmu-miR-24-3p miRNA MIMAT0000219 Anapc4 mRNA 52206 CLIP-seq 0.5483 Anapc4 RAID03441927 mmu-miR-21a-5p miRNA MIMAT0000530 Anapc4 mRNA 52206 CLIP-seq 0.5483 Anapc4 RAID03582243 mmu-miR-7229-3p miRNA MIMAT0028427 Anapc4 mRNA 52206 Prediction 0.1828 Anapc4 RAID04046237 mmu-miR-23b-3p miRNA MIMAT0000125 Anapc4 mRNA 52206 CLIP-seq//Prediction 0.6308