DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004520 mmu-let-7i* 231760 Rimbp2 ucgUUCCGUCAUCGAACG-CGUc :||||| | |||| ||| ccaGAGGCAAGAAAUUGCUGCAa 2 20 2247 2269 [mm9:5:129264928-129264950:-] 0.7907 123 0 -15.46 -0.1693 MIMAT0004526 mmu-miR-101a* 231760 Rimbp2 cguaguCGUGAC---ACUAUUGACu |: ||| | ||||||| cuugauGUUCUGGCCUUAUAACUGc 2 17 2736 2760 [mm9:5:129264437-129264461:-] 0.7000 143 7 -10.42 -0.2072 MIMAT0004546 mmu-miR-202-5p 231760 Rimbp2 uuucUUCAUAUACGUAUC-CUu || || || ||||| || uggcAACUAGAUUCAUAGUGAa 2 18 707 728 [mm9:5:129266469-129266490:-] 0.5739 125 0 -7.59 -0.2286 MIMAT0004546 mmu-miR-202-5p 231760 Rimbp2 uuucUUCAUAUACGUAUC-CUu || || || ||||| || uggcAACUAGAUUCAUAGUGAa 2 18 208 229 [mm9:5:129266469-129266490:-] 0.5739 125 0 -7.59 -0.8419 MIMAT0004583 mmu-miR-130b* 231760 Rimbp2 ucauCACGU-UGUCCCUUUCUCa ||| : :| ||||||| caauGUGGGCUUAAAGAAAGAGa 2 19 599 621 [mm9:5:129266576-129266598:-] 0.5772 141 7 -14.71 -0.7974 MIMAT0004583 mmu-miR-130b* 231760 Rimbp2 ucauCACGU-UGUCCCUUUCUCa ||| : :| ||||||| caauGUGGGCUUAAAGAAAGAGa 2 19 100 122 [mm9:5:129266576-129266598:-] 0.5772 141 7 -14.71 -1.2507 MIMAT0004583 mmu-miR-130b* 231760 Rimbp2 ucauCACGU-UGUCCCUUUCUCa ||| : :| ||||||| caauGUGGGCUUAAAGAAAGAGa 2 19 100 122 [mm9:5:129266576-129266598:-] 0.5772 141 7 -14.71 -1.2552 MIMAT0004618 mmu-miR-196a* 231760 Rimbp2 aguccgucaaagaaCAACGGcu |||||| uacucacaaggagaGUUGCCua 3 9 345 366 [mm9:5:129266332-129266353:-] 0.5524 120 0 -11.50 -0.1007 MIMAT0004622 mmu-let-7c-1* 231760 Rimbp2 ccUUUCGAUCUUCCAACAUGUc :|| ||| | ||||||| caGAAACUAUA---UUGUACAu 2 21 3381 3399 [mm9:5:129263798-129263816:-] 0.5603 148 7 -8.95 -0.5741 MIMAT0004622 mmu-let-7c-1* 231760 Rimbp2 ccUUUCGAUC-UUCCAACAUGUc ||| :| | | ||||||| auAAACUUUGUUAUUUUGUACA- 2 21 3507 3528 [mm9:5:129263669-129263690:-] 0.6362 147 7 -5.85 -1.1027 MIMAT0004626 mmu-miR-18a* 231760 Rimbp2 gucuucCUCGUGAAUCCC-GUCa ||| ::| |||| ||| ccucccGAGGGUUCAGGGACAGc 2 17 2105 2127 [mm9:5:129265070-129265092:-] 0.7907 120 0 -15.32 -0.1850 MIMAT0004629 mmu-miR-22* 231760 Rimbp2 auUUCGAACGGUGACUUCU-UGa |||: || || ||||| || guAAGUGAGCAACCGAAGACACc 2 21 519 541 [mm9:5:129266656-129266678:-] 0.7569 128 0 -11.47 -0.2388 MIMAT0004629 mmu-miR-22* 231760 Rimbp2 auUUCGAACGGUGACUUCU-UGa |||: || || ||||| || guAAGUGAGCAACCGAAGACACc 2 21 20 42 [mm9:5:129266656-129266678:-] 0.7569 128 0 -11.47 -0.9707 MIMAT0004629 mmu-miR-22* 231760 Rimbp2 auUUCGAACGGUGACUUCU-UGa |||: || || ||||| || guAAGUGAGCAACCGAAGACACc 2 21 20 42 [mm9:5:129266656-129266678:-] 0.7569 128 0 -11.47 -0.9168 MIMAT0004635 mmu-miR-92a* 231760 Rimbp2 caUUACGG--UGGUUAGGGGUGGa |: ||| |:|:| ||||||| gcAGGGCCUUAUCGA-CCCCACCu 2 21 1673 1695 [mm9:5:129265502-129265524:-] 0.5151 153 7 -26.18 -0.1147 MIMAT0000544 mmu-miR-129-3p 231760 Rimbp2 uacgaaaaaccccaUUCCCGAa ||||||| cucgaaaaagaaaaAAGGGCUg 2 9 2221 2242 [mm9:5:129264955-129264976:-] 0.7907 140 7 -10.75 -0.5224 MIMAT0000558 mmu-miR-325* 231760 Rimbp2 ugugaaugacuCGUGGAUGAUCc |:||||||||| acugucgcaauGUACCUACUAGg 2 13 2080 2102 [mm9:5:129265095-129265117:-] 0.7136 156 7 -24.74 -0.1536 MIMAT0004647 mmu-miR-338-5p 231760 Rimbp2 guGAGUCGUGGUCCUAUAACAa :|||| | | ||||||| ucUUCAGAA--ACUAUAUUGUa 2 21 3377 3396 [mm9:5:129263801-129263820:-] 0.5603 149 7 -10.85 -0.4408 MIMAT0004660 mmu-miR-19a* 231760 Rimbp2 caUCAC-GUUGAUAC-GUUUUGAu :||| |:| | | ||||||| auGGUGAGAGCCAAGACAAAACUu 2 21 936 959 [mm9:5:129266238-129266261:-] 0.5524 150 7 -13.15 -0.1634 MIMAT0004660 mmu-miR-19a* 231760 Rimbp2 caucacgUUGAUAC---GUUUUGau || |||| |||||| agaaaagAAAUAUGUCUCAAAACaa 3 16 124 148 [mm9:5:129266550-129266574:-] 0.5739 130 0 -6.16 -0.2000 MIMAT0004662 mmu-miR-139-3p 231760 Rimbp2 gagguugucccggcGCAGAGgu |||||| auagugaaaugaauCGUCUCga 3 9 222 243 [mm9:5:129266455-129266476:-] 0.5631 120 0 -12.59 -0.1648 MIMAT0004670 mmu-miR-7a* 231760 Rimbp2 auaccgucugacACUAAACAAc | ||||||| cuguuccuuucaUUAUUUGUUg 2 11 3064 3085 [mm9:5:129264112-129264133:-] 0.5066 142 7 -8.15 -0.2022 MIMAT0002104 mmu-miR-463* 231760 Rimbp2 uacuACCUGUUGUUUAA-UCCAu | ||: || |||| |||| uccuUAGAUUAC-AAUUAAGGUu 2 19 1564 1585 [mm9:5:129265612-129265633:-] 0.7352 120 0 -9.72 -0.5552 MIMAT0003166 mmu-miR-546 231760 Rimbp2 cugaggcaCGGUGGUa ||||||| auagcaaaGCCACCAc 2 9 3121 3136 [mm9:5:129264061-129264076:-] 0.5066 140 7 -12.66 -0.1205 MIMAT0004789 mmu-miR-450a-3p 231760 Rimbp2 uacuuaCGUUUCGUAGGGGUUa |:: : ||||||||| caaacaGUGUGCCAUCCCCAAa 2 17 1607 1628 [mm9:5:129265569-129265590:-] 0.6096 152 7 -17.74 -0.4078 MIMAT0003736 mmu-miR-670 231760 Rimbp2 aaGUGGUGUAUGUGAGUCCCUa | :| |: : ::||||||| uuCCUCCCGAGGGUUCAGGGAc 2 21 2103 2124 [mm9:5:129265073-129265094:-] 0.7907 148 7 -18.51 -0.1131 MIMAT0003737 mmu-miR-666-5p 231760 Rimbp2 ccGAGA-GUGUCGACACGGGCGa ||:| ||| :||||||||| uuCUUUGGACA-UUGUGCCCGCa 2 21 125 146 [mm9:5:129267051-129267072:-] 0.5129 161 7 -24.65 -0.1361 MIMAT0003471 mmu-miR-692 231760 Rimbp2 cucACUCCGCGAG----UUUCUCUa || || |||: ||||||| caaUGUGG-GCUUAAAGAAAGAGAg 2 19 599 622 [mm9:5:129266575-129266598:-] 0.5772 143 7 -14.83 -0.1882 MIMAT0003471 mmu-miR-692 231760 Rimbp2 cucACUCCGCGAG----UUUCUCUa || || |||: ||||||| caaUGUGG-GCUUAAAGAAAGAGAg 2 19 100 123 [mm9:5:129266575-129266598:-] 0.5772 143 7 -14.83 -0.7678 MIMAT0003471 mmu-miR-692 231760 Rimbp2 cucACUCCGCGAG----UUUCUCUa || || |||: ||||||| caaUGUGG-GCUUAAAGAAAGAGAg 2 19 100 123 [mm9:5:129266575-129266598:-] 0.5772 143 7 -14.83 -0.7653 MIMAT0004189 mmu-miR-693-3p 231760 Rimbp2 aaUGUCGGUGUAGACUUUCGACg ||| :|: ||| ||||||| gaACA--UAUUUCUUAAAGCUGu 2 22 796 816 [mm9:5:129266381-129266401:-] 0.5524 158 7 -15.29 -0.3925 MIMAT0004189 mmu-miR-693-3p 231760 Rimbp2 aaUGUCGGUGUAGACUUUCGACg ||| :|: ||| ||||||| gaACA--UAUUUCUUAAAGCUGu 2 22 297 317 [mm9:5:129266381-129266401:-] 0.5524 158 7 -15.29 -1.0464 MIMAT0003474 mmu-miR-694 231760 Rimbp2 gaAGUCCGUUG-UAAAAGUc |:|| | : ||||||| agUUAGACCUUGAUUUUCAa 2 18 1231 1250 [mm9:5:129265947-129265966:-] 0.6871 144 7 -6.29 -0.3658 MIMAT0003476 mmu-miR-669b 231760 Rimbp2 uguacguguacgUGUGUUUUGa | ||||||| uggugagagccaAGACAAAACu 2 11 937 958 [mm9:5:129266239-129266260:-] 0.5524 142 7 -12.06 -0.1073 MIMAT0003476 mmu-miR-669b 231760 Rimbp2 uguacgUGUACGUGUGUUUUga ||| || |||||| cucaaaACAAACAAACAAAAaa 3 17 139 160 [mm9:5:129266538-129266559:-] 0.5739 136 0 -7.59 -0.2553 MIMAT0003476 mmu-miR-669b 231760 Rimbp2 uguacgUGUACGUGUGUUUUGa |:|||: | |||||| aaagaaAUAUGU-CUCAAAACa 2 17 127 147 [mm9:5:129266551-129266571:-] 0.5739 126 6 -10.22 -0.2129 MIMAT0003480 mmu-miR-297b-5p 231760 Rimbp2 ugUACA-AG-UACGUGUGUAUGUa |||| || | || ||| ||| auAUGUCUCAAAACAAACAAACAa 2 21 133 156 [mm9:5:129266542-129266565:-] 0.5739 126 0 -10.46 -0.1089 MIMAT0003493 mmu-miR-703 231760 Rimbp2 aagaaagGAAGA-CUUCCAAAa :|||| |||||||| uuuguaaUUUCUGGAAGGUUUg 2 15 3326 3347 [mm9:5:129263850-129263871:-] 0.6932 157 7 -14.85 -0.1657 MIMAT0003510 mmu-miR-717 231760 Rimbp2 ucUCUUCCAUAGAGACAGACUc |||| | | ||||| | agAGAAAAGAAAUAUGUCUCAa 2 21 122 143 [mm9:5:129266555-129266576:-] 0.5739 120 0 -10.60 -0.1270 MIMAT0004236 mmu-miR-741 231760 Rimbp2 agaUGUAUCUUACCGUAGAGAGu :| || | || ||||||| ggaGCCUAAAUUGAAAUCUCUCa 2 21 3160 3182 [mm9:5:129264015-129264037:-] 0.5557 156 7 -14.15 -0.4939 MIMAT0004236 mmu-miR-741 231760 Rimbp2 agAUGUAU--CUUACCGUAG-AGAGu | |||| ||| | ||| |||| gaUUCAUAGUGAAAUGAAUCGUCUCg 2 22 716 741 [mm9:5:129266456-129266481:-] 0.5631 124 0 -15.51 -0.4306 MIMAT0004236 mmu-miR-741 231760 Rimbp2 agAUGUAU--CUUACCGUAG-AGAGu | |||| ||| | ||| |||| gaUUCAUAGUGAAAUGAAUCGUCUCg 2 22 217 242 [mm9:5:129266456-129266481:-] 0.5631 124 0 -15.51 -1.0752 MIMAT0004237 mmu-miR-742 231760 Rimbp2 aaaUGGGUCGUA-CCACCGAAAg |:||| ::| ||||||| caaAUCCA-UGUCACUGGCUUUa 2 20 2313 2334 [mm9:5:129264863-129264884:-] 0.5094 144 7 -14.75 -0.1020 MIMAT0004841 mmu-miR-871 231760 Rimbp2 guacuGACCGUGAUUAGACUUAu ||| : :||:||||||| cucccCUGCUUUUAGUCUGAAUu 2 19 1797 1819 [mm9:5:129265378-129265400:-] 0.5125 162 7 -16.57 -0.1226 MIMAT0004841 mmu-miR-871 231760 Rimbp2 guacUGACCGUG----AUUA-GACUUAu |:|||||| |: | |||||| ugaaAUUGGCACACAGUGUUCCUGAAUc 2 20 1402 1429 [mm9:5:129265768-129265795:-] 0.4621 122 6 -16.15 -0.1340 MIMAT0004870 mmu-miR-453 231760 Rimbp2 acguUCG--AGUG-AUACUC-CGUUGGa ||| |||| || | | |||||| auguAGCCGUCACGUAAGUGAGCAACCg 2 21 506 533 [mm9:5:129266664-129266691:-] 0.7569 126 6 -21.21 -0.3391 MIMAT0004870 mmu-miR-453 231760 Rimbp2 acguUCG--AGUG-AUACUC-CGUUGGa ||| |||| || | | |||||| auguAGCCGUCACGUAAGUGAGCAACCg 2 21 7 34 [mm9:5:129266664-129266691:-] 0.7569 126 6 -21.21 -1.1335 MIMAT0004870 mmu-miR-453 231760 Rimbp2 acguUCG--AGUG-AUACUC-CGUUGGa ||| |||| || | | |||||| auguAGCCGUCACGUAAGUGAGCAACCg 2 21 7 34 [mm9:5:129266664-129266691:-] 0.7569 126 6 -21.21 -1.0825 MIMAT0004892 mmu-miR-568 231760 Rimbp2 caCACAUAUG--UAAAUAUGUa || | ||| |||||||| cuGUUUUUACUUCUUUAUACAu 2 19 3284 3305 [mm9:5:129263892-129263913:-] 0.6932 153 7 -9.89 -0.7759 MIMAT0004932 mmu-miR-878-5p 231760 Rimbp2 acagAACUGUAGGUUGAUCUAu ||| | ||||||||| ucagUUGCCUGGCAACUAGAUu 2 19 199 220 [mm9:5:129266478-129266499:-] 0.5739 158 7 -15.45 -0.2878 MIMAT0004938 mmu-miR-875-3p 231760 Rimbp2 guAUCGGAGU--CAUAAAAGUCc |: |||:: | ||||||| ucUGCCCUUGUUUUUUUUUCAGu 2 20 81 103 [mm9:5:129267094-129267116:-] 0.4259 146 7 -11.20 -0.4420 MIMAT0004938 mmu-miR-875-3p 231760 Rimbp2 guaucggaGUCAU-AAAAGUCc || || ||||||| ucuuuauaCA-UACUUUUCAGa 2 14 3295 3315 [mm9:5:129263882-129263902:-] 0.6932 142 7 -8.25 -0.6880 MIMAT0005293 mmu-miR-467e 231760 Rimbp2 ugUAUAUGUACGAGUGUG-AAUa :| |:| | |:|||| ||| acGUUUGCCUCAUUACACAUUAu 2 21 2671 2693 [mm9:5:129264504-129264526:-] 0.5796 120 0 -12.18 -0.2603 MIMAT0005832 mmu-miR-669g 231760 Rimbp2 uaguacaguugUGUAUG-UUACGu :||||| ||||| acgaggugcugGCAUACUAAUGCa 2 13 1110 1133 [mm9:5:129266064-129266087:-] 0.5390 120 0 -14.94 -0.1557 MIMAT0005833 mmu-miR-669d 231760 Rimbp2 uguauAUGUACGUGUGUGUUCa |:: ||: :||||||| aaagcUGUUUGUUUACACAAGa 2 18 809 830 [mm9:5:129266367-129266388:-] 0.5524 153 7 -13.20 -0.2794 MIMAT0005833 mmu-miR-669d 231760 Rimbp2 uguauAUGUACGUGUGUGUUCa |:: ||: :||||||| aaagcUGUUUGUUUACACAAGa 2 18 310 331 [mm9:5:129266367-129266388:-] 0.5524 153 7 -13.20 -0.9238 MIMAT0005843 mmu-miR-1188 231760 Rimbp2 aggacCGGGUUGGAGUGUGGu |::| |::||||||| agaguGUUC-AUUUCACACCc 2 17 477 496 [mm9:5:129266701-129266720:-] 0.7569 150 7 -18.35 -0.5853 MIMAT0005846 mmu-miR-467f 231760 Rimbp2 acauccacacacaCACAUAUa ||||||| aauaaaaaacaccGUGUAUAc 2 9 2780 2800 [mm9:5:129264397-129264417:-] 0.6393 140 7 -6.13 -0.1167 MIMAT0005847 mmu-miR-1190 231760 Rimbp2 cugucUCCCCUUG--GAGUCGACu ||| | || :||||||| uagguAGGUGCACAGUUCAGCUGa 2 18 242 265 [mm9:5:129266932-129266955:-] 0.5017 152 7 -21.27 -0.1011 MIMAT0005857 mmu-miR-1196 231760 Rimbp2 uccgucuccguCCAUCUAAa |||||||| uaauuguauguGGUAGAUUg 2 10 3407 3426 [mm9:5:129263771-129263790:-] 0.5603 145 7 -9.99 -0.1924 MIMAT0005858 mmu-miR-1197 231760 Rimbp2 ucuucAUCUGGUA-CACAGGAu | | |: | ||||||| aaucuUUGCCUUUAGUGUCCUa 2 17 3023 3044 [mm9:5:129264153-129264174:-] 0.5066 143 7 -15.16 -0.4251 MIMAT0007868 mmu-miR-1903 231760 Rimbp2 acAGA-GUCCUUCU-UCUUCUUCc ||| | |:| | |||||||| caUCUGCUUGGACAUAGAAGAAGa 2 21 456 479 [mm9:5:129266718-129266741:-] 0.7569 154 7 -17.00 -0.6964 MIMAT0007871 mmu-miR-1892 231760 Rimbp2 uaggagggAGGGCAGGGGUUUa | || |||||||| aaacagugUGCCAUCCCCAAAg 2 15 1608 1629 [mm9:5:129265568-129265589:-] 0.6096 154 7 -16.88 -0.2627 MIMAT0007878 mmu-miR-1894-3p 231760 Rimbp2 gaGGGAAGUGGGAGA-GGGAACg ||| || | ||| |||||| gcCCCACCAGCAUCUGCCCUUGu 2 21 69 91 [mm9:5:129267106-129267128:-] 0.4303 132 6 -25.95 -0.1426 MIMAT0009391 mmu-miR-1928 231760 Rimbp2 cucGACCGUUACAUCGa | ||| ||||||| --uCAGGC-AUGUAGCc 2 15 1 14 [mm9:5:129266684-129266697:-] 0.7569 148 7 -14.58 -0.3390 MIMAT0009391 mmu-miR-1928 231760 Rimbp2 cucGACCGUUACAUCGa | ||| ||||||| --uCAGGC-AUGUAGCc 2 15 1 14 [mm9:5:129266684-129266697:-] 0.7569 148 7 -14.58 -0.3359 MIMAT0009399 mmu-miR-1935 231760 Rimbp2 ucucuaGGCGGUCGGAGACGGa || || :||||||| ccucccCCUCCCCUCUCUGCCa 2 17 9 30 [mm9:5:129267167-129267188:-] 0.4659 152 7 -20.77 -0.7145 MIMAT0009404 mmu-miR-1940 231760 Rimbp2 uugacGAGGUGGA-AGAGU-C-AGG-AGGUa | |||||| :||| | ||| |||| aucgaCCCCACCUAGUUCAUGAUCCAUCCAa 2 23 1683 1713 [mm9:5:129265484-129265514:-] 0.4983 127 0 -24.93 -0.4120 MIMAT0009421 mmu-miR-669o 231760 Rimbp2 ugUAUUUGUACGUGUGUGUUGAu ||::: ||| :| ||||||| ugAUGGG-AUG-GC-CACAACUu 2 22 3242 3261 [mm9:5:129263936-129263955:-] 0.6376 147 7 -13.77 -0.1126 MIMAT0009424 mmu-miR-1953 231760 Rimbp2 gucuucggacUCUUGAAAGGGu | |:||||||| aaugaauggcAAAGCUUUCCCu 2 13 3350 3371 [mm9:5:129263826-129263847:-] 0.6267 148 7 -15.60 -0.1611 MIMAT0009439 mmu-miR-1966 231760 Rimbp2 cuGAGAGAGGACUCGGUCGA-GGGAa || |: | | |::|||| |||| gcCUAUUGCAU-UGUUAGCUACCCUc 2 24 861 885 [mm9:5:129266312-129266336:-] 0.5524 121 0 -18.84 -0.1245 MIMAT0009439 mmu-miR-1966 231760 Rimbp2 cuGAGAGAGGACUCGGUCGA-GGGAa || |: | | |::|||| |||| gcCUAUUGCAU-UGUUAGCUACCCUc 2 24 362 386 [mm9:5:129266312-129266336:-] 0.5524 121 0 -18.84 -0.5825 MIMAT0009441 mmu-miR-1968 231760 Rimbp2 ucAGGUG-GUAGGAAUUGUC-GACGu |::|: ||| ||| ||| |||| ucUUUAUACAUACUUUUCAGACUGCc 2 23 3295 3320 [mm9:5:129263877-129263902:-] 0.6932 129 0 -15.51 -0.8216 MIMAT0009445 mmu-miR-1274a 231760 Rimbp2 accgcggacuugucCCUGGAcu |||||| acaaaaaaaucauuGGACCUaa 3 9 153 174 [mm9:5:129266524-129266545:-] 0.5739 120 0 -8.89 -0.1756 MIMAT0009446 mmu-miR-1971 231760 Rimbp2 agagUCGGGUCGGAAAUg | |:: ||||||| accaAUCUUUGCCUUUAg 2 15 3020 3037 [mm9:5:129264160-129264177:-] 0.5066 146 7 -13.34 -0.1283 MIMAT0009456 mmu-miR-1839-5p 231760 Rimbp2 guUCUGGACAAGAUAGA-UGGAa || :| |||||| |||| aaAGUAUUAGGCUAUCUCACCUg 2 21 672 694 [mm9:5:129266503-129266525:-] 0.5739 120 0 -14.00 -0.1700 MIMAT0009456 mmu-miR-1839-5p 231760 Rimbp2 guUCUGGACAAGAUAGA-UGGAa || :| |||||| |||| aaAGUAUUAGGCUAUCUCACCUg 2 21 173 195 [mm9:5:129266503-129266525:-] 0.5739 120 0 -14.00 -0.7256 MIMAT0009458 mmu-miR-1981 231760 Rimbp2 cgguGCAGAUUCGGGUCGGAAAUg :| | || |:: ||||||| gagcUGACCAAUCUUUGCCUUUAg 2 21 3014 3037 [mm9:5:129264160-129264183:-] 0.5066 156 7 -15.76 -0.1258 MIMAT0009461 mmu-miR-1982.2 231760 Rimbp2 gacAC-CCUCUUGUAUCCCACu || | | |:| ||||||| gcaUGUGUACAGC-UAGGGUGa 2 19 3472 3492 [mm9:5:129263705-129263725:-] 0.6409 147 7 -19.70 -0.1210 MIMAT0011215 mmu-miR-2139 231760 Rimbp2 cgucAAUG-GUCCUCGUCGC-GUCGa |||| || |||: ||| |||| uuguUUACACAAGAGU-GCGCCAGCg 2 21 318 342 [mm9:5:129266356-129266380:-] 0.5524 129 0 -18.85 -0.4247 MIMAT0011222 mmu-miR-2146 231760 Rimbp2 guguaccUUGGGAAGAGGUg |: : ||||||| gcgcccuAGGUGUUCUCCAu 2 14 1208 1227 [mm9:5:129265970-129265989:-] 0.7071 141 7 -15.21 -0.1794 MIMAT0012771 mmu-miR-432 231760 Rimbp2 gaCGGGUGACUAGAUGAG-GUUCu ||| :| :| ||||| |||| gcGCCAGC--GUGUACUCACAAGg 2 22 334 355 [mm9:5:129266343-129266364:-] 0.5524 122 0 -18.59 -0.3957 MIMAT0012774 mmu-miR-664 231760 Rimbp2 auCCGACCCCUCAUUUACUUAu || || |||||||||| cuGGAAGGUUUGUAAAUGAAUg 2 21 3336 3357 [mm9:5:129263840-129263861:-] 0.6932 160 7 -19.17 -0.1907 MIMAT0012774 mmu-miR-664 231760 Rimbp2 auccgaccccUCA-UUUACUUAu ||| |||||||| cuagauucauAGUGAAAUGAAUc 2 13 713 735 [mm9:5:129266462-129266484:-] 0.5631 151 7 -7.93 -0.1192 MIMAT0012774 mmu-miR-664 231760 Rimbp2 auccgaccccUCA-UUUACUUAu ||| |||||||| cuagauucauAGUGAAAUGAAUc 2 13 214 236 [mm9:5:129266462-129266484:-] 0.5631 151 7 -7.93 -0.5917 MIMAT0015644 mmu-miR-1186b 231760 Rimbp2 caccacGUACGGAAAUUAGGGu || |||||||||| ccaagaCAAAACUUUAAUCCCa 2 17 946 967 [mm9:5:129266230-129266251:-] 0.5228 156 7 -18.56 -0.2581 MIMAT0015646 mmu-miR-3474 231760 Rimbp2 cuuaGGUGCAGAGGAGGG-UCCc |:| || ||||||| ||| ccuaCUAGGU-UCCUCCCGAGGg 2 19 2094 2115 [mm9:5:129265082-129265103:-] 0.7907 128 0 -27.97 -0.1307 MIMAT0000128 mmu-miR-30a 231760 Rimbp2 gaaggucagcuccuACAAAUGu ||||||| uucuuaaagcuguuUGUUUACa 2 9 804 825 [mm9:5:129266372-129266393:-] 0.5524 140 7 -14.99 -0.4083 MIMAT0000128 mmu-miR-30a 231760 Rimbp2 gaaggucagcuccuACAAAUGu ||||||| uucuuaaagcuguuUGUUUACa 2 9 305 326 [mm9:5:129266372-129266393:-] 0.5524 140 7 -14.99 -1.0603 MIMAT0000130 mmu-miR-30b 231760 Rimbp2 ucGACUCACAUCCUACAAAUGu || | | | ||||||| uuCUUAAAGCUGUUUGUUUACa 2 21 804 825 [mm9:5:129266372-129266393:-] 0.5524 144 7 -13.79 -0.4146 MIMAT0000130 mmu-miR-30b 231760 Rimbp2 ucGACUCACAUCCUACAAAUGu || | | | ||||||| uuCUUAAAGCUGUUUGUUUACa 2 21 305 326 [mm9:5:129266372-129266393:-] 0.5524 144 7 -13.79 -1.0655 MIMAT0000133 mmu-miR-101a 231760 Rimbp2 aaGUCAAUAGUGUCAUGACAu |||| :| : ||||||| caCAGUGGU--UUGUACUGUc 2 20 2760 2778 [mm9:5:129264419-129264437:-] 0.7000 148 7 -15.02 -0.3200 MIMAT0004528 mmu-miR-125a-3p 231760 Rimbp2 ccgAGGGUUC-UUGGAGUGGACa | ::|:| |:|||||||| aagUAUUAGGCUAUCUCACCUGg 2 20 174 196 [mm9:5:129266502-129266524:-] 0.5739 154 7 -21.40 -0.3949 MIMAT0000155 mmu-miR-142-3p 231760 Rimbp2 agguauuucauccuuUGUGAUGu ||||||| gagagcuacacucuuACACUACc 2 9 2393 2415 [mm9:5:129264782-129264804:-] 0.5563 140 7 -13.86 -0.1620 MIMAT0000209 mmu-miR-129-5p 231760 Rimbp2 cguucgggucuggcGUUUUUc |||||| ucaaaacaaacaaaCAAAAAa 2 8 140 160 [mm9:5:129266538-129266558:-] 0.5739 120 6 -6.32 -0.3150 MIMAT0000212 mmu-miR-183 231760 Rimbp2 ucacuuAAGAUGGU--CACGGUAu ||| | || ||||||| uuuucuUUCAAACAGUGUGCCAUc 2 17 1599 1622 [mm9:5:129265575-129265598:-] 0.6873 151 7 -12.68 -0.3000 MIMAT0000215 mmu-miR-186 231760 Rimbp2 ucggguuuuccucuuAAGAAAc |||||| guaaacuguuuuuacUUCUUUa 2 8 3279 3300 [mm9:5:129263897-129263918:-] 0.6932 120 6 -3.63 -0.1159 MIMAT0000221 mmu-miR-191 231760 Rimbp2 gucgacgaaaacccuAAGGCAAc ||||||| acaauuaagguucauUUCCGUUu 2 9 1574 1596 [mm9:5:129265601-129265623:-] 0.7352 140 7 -9.78 -0.9459 MIMAT0000221 mmu-miR-191 231760 Rimbp2 guCGACGAAAACCCUAAGG--CAAc || ||| ||| |||||| ||| acGCGGCUCUUGAGAUUCCUAGUUu 2 22 2704 2728 [mm9:5:129264469-129264493:-] 0.7000 129 0 -16.56 -0.4853 MIMAT0000236 mmu-miR-203 231760 Rimbp2 gaucaccaggauuuGUAAAGUg ||||||| agaagaagaguguuCAUUUCAc 2 9 471 492 [mm9:5:129266705-129266726:-] 0.7569 140 7 -12.30 -0.4626 MIMAT0000248 mmu-miR-30e 231760 Rimbp2 gaaggucaguuccuACAAAUGu ||||||| uucuuaaagcuguuUGUUUACa 2 9 804 825 [mm9:5:129266372-129266393:-] 0.5524 140 7 -12.83 -0.4146 MIMAT0000248 mmu-miR-30e 231760 Rimbp2 gaaggucaguuccuACAAAUGu ||||||| uucuuaaagcuguuUGUUUACa 2 9 305 326 [mm9:5:129266372-129266393:-] 0.5524 140 7 -12.83 -1.0655 MIMAT0004576 mmu-miR-296-3p 231760 Rimbp2 ccUCUCGGAGGU-GGGU-UGGGAg ||||: |:|| ::|| ||||| gaAGAGUGUUCAUUUCACACCCUa 2 21 475 498 [mm9:5:129266699-129266722:-] 0.7569 131 0 -22.25 -0.7284 MIMAT0000383 mmu-let-7d 231760 Rimbp2 uuGAU-ACGUUG-GAU-GAU-GGAGa ||| |||| : :|| ||| |||| gcCUAUUGCAUUGUUAGCUACCCUCa 2 21 861 886 [mm9:5:129266311-129266336:-] 0.5524 121 0 -15.81 -0.1793 MIMAT0000383 mmu-let-7d 231760 Rimbp2 uuGAU-ACGUUG-GAU-GAU-GGAGa ||| |||| : :|| ||| |||| gcCUAUUGCAUUGUUAGCUACCCUCa 2 21 362 387 [mm9:5:129266311-129266336:-] 0.5524 121 0 -15.81 -0.7036 MIMAT0000514 mmu-miR-30c 231760 Rimbp2 cgacucucacauccuACAAAUGu ||||||| uuucuuaaagcuguuUGUUUACa 2 9 803 825 [mm9:5:129266372-129266394:-] 0.5524 140 7 -11.85 -0.4146 MIMAT0000514 mmu-miR-30c 231760 Rimbp2 cgacucucacauccuACAAAUGu ||||||| uuucuuaaagcuguuUGUUUACa 2 9 304 326 [mm9:5:129266372-129266394:-] 0.5524 140 7 -11.85 -1.0655 MIMAT0000515 mmu-miR-30d 231760 Rimbp2 gaaggucagccccuACAAAUGu ||||||| uucuuaaagcuguuUGUUUACa 2 9 804 825 [mm9:5:129266372-129266393:-] 0.5524 140 7 -14.27 -0.4083 MIMAT0000515 mmu-miR-30d 231760 Rimbp2 gaaggucagccccuACAAAUGu ||||||| uucuuaaagcuguuUGUUUACa 2 9 305 326 [mm9:5:129266372-129266393:-] 0.5524 140 7 -14.27 -1.0603 MIMAT0000525 mmu-let-7f 231760 Rimbp2 uuGAU-AUGUUA-GAU-GAU-GGAGu ||| |:|| | :|| ||| |||| gcCUAUUGCAUUGUUAGCUACCCUCa 2 21 861 886 [mm9:5:129266311-129266336:-] 0.5524 121 0 -16.09 -0.1827 MIMAT0000525 mmu-let-7f 231760 Rimbp2 uuGAU-AUGUUA-GAU-GAU-GGAGu ||| |:|| | :|| ||| |||| gcCUAUUGCAUUGUUAGCUACCCUCa 2 21 362 387 [mm9:5:129266311-129266336:-] 0.5524 121 0 -16.09 -0.7111 MIMAT0004651 mmu-miR-340-5p 231760 Rimbp2 uuagucAGAGUAACGAAAUAUu |:|:| | ||||||| aacuguUUUUACUUCUUUAUAc 2 17 3282 3303 [mm9:5:129263894-129263915:-] 0.6932 156 7 -7.86 -0.7317 MIMAT0000616 mmu-miR-101b 231760 Rimbp2 aaGUCGAUAGUGUCAUGACAu |||: :| : ||||||| caCAGUGGU--UUGUACUGUc 2 20 2760 2778 [mm9:5:129264419-129264437:-] 0.7000 144 7 -14.23 -0.3227 MIMAT0000654 mmu-miR-32 231760 Rimbp2 acguUGAAUCAUU---ACA-CGUUAu ||| | ||| ||| ||||| acgcACUCAAUAAAACUGUCGCAAUg 2 19 2066 2091 [mm9:5:129265106-129265131:-] 0.5856 121 0 -9.44 -0.1455 MIMAT0000662 mmu-miR-216a 231760 Rimbp2 aguGUCAACGGUCGACUCUAAu || | | :||||||| uuuCACGCGGCUCUUGAGAUUc 2 20 2700 2721 [mm9:5:129264476-129264497:-] 0.6398 143 7 -16.55 -0.1435 MIMAT0000663 mmu-miR-218 231760 Rimbp2 uguacCAAUCUAGUUCGUGUu || | | ||||||| ccucaGUCAAA--AAGCACAa 2 17 882 900 [mm9:5:129266297-129266315:-] 0.5524 141 7 -10.57 -0.3252 MIMAT0000663 mmu-miR-218 231760 Rimbp2 uguaccaaucuAG-UUCGUGUu || ||||||| guucccucuccUCAAAGCACAa 2 11 1055 1076 [mm9:5:129266121-129266142:-] 0.4932 141 7 -10.16 -0.1089 MIMAT0000663 mmu-miR-218 231760 Rimbp2 uguacCAAUCUAGUUCGUGUu || | | ||||||| ccucaGUCAAA--AAGCACAa 2 17 383 401 [mm9:5:129266297-129266315:-] 0.5524 141 7 -10.57 -1.1311 MIMAT0000669 mmu-miR-221 231760 Rimbp2 cuuugggucGUCUGUUACAUCGa |||:| ||||||| --------uCAGGC-AUGUAGCc 2 15 1 14 [mm9:5:129266684-129266697:-] 0.7569 152 7 -17.14 -0.3362 MIMAT0000669 mmu-miR-221 231760 Rimbp2 cuuugggucGUCUGUUACAUCGa |||:| ||||||| --------uCAGGC-AUGUAGCc 2 15 1 14 [mm9:5:129266684-129266697:-] 0.7569 152 7 -17.14 -0.3332 MIMAT0000670 mmu-miR-222 231760 Rimbp2 ugggucaucGGUC--UACAUCGa :||| ||||||| ---------UCAGGCAUGUAGCc 2 13 1 14 [mm9:5:129266684-129266697:-] 0.7569 143 7 -12.24 -0.3523 MIMAT0000670 mmu-miR-222 231760 Rimbp2 ugggucaucGGUC--UACAUCGa :||| ||||||| ---------UCAGGCAUGUAGCc 2 13 1 14 [mm9:5:129266684-129266697:-] 0.7569 143 7 -12.24 -0.3492 MIMAT0000673 mmu-miR-181b 231760 Rimbp2 ugggUGGCUGUCG--UUACUUA-CAa |:: |:||: ||||||| || cuagAUUCAUAGUGAAAUGAAUCGUc 2 20 713 738 [mm9:5:129266459-129266484:-] 0.5631 122 0 -14.74 -0.2547 MIMAT0000673 mmu-miR-181b 231760 Rimbp2 ugggUGGCUGUCG--UUACUUA-CAa |:: |:||: ||||||| || cuagAUUCAUAGUGAAAUGAAUCGUc 2 20 214 239 [mm9:5:129266459-129266484:-] 0.5631 122 0 -14.74 -0.8843 MIMAT0000739 mmu-miR-375 231760 Rimbp2 agugcGCUCGGC-UUGCUUGUUu :|| :|| ||||||| ugaaaUGAAUCGUCUCGAACAAu 2 18 725 747 [mm9:5:129266450-129266472:-] 0.5631 144 7 -17.33 -0.6314 MIMAT0000739 mmu-miR-375 231760 Rimbp2 agugcGCUCGGC-UUGCUUGUUu :|| :|| ||||||| ugaaaUGAAUCGUCUCGAACAAu 2 18 226 248 [mm9:5:129266450-129266472:-] 0.5631 144 7 -17.33 -1.1939 MIMAT0000739 mmu-miR-375 231760 Rimbp2 aguGCGCUCGGCUUGCUUGUUu | | | | ||| ||||| uguCUCAAAACAAACAAACAAa 2 20 136 157 [mm9:5:129266541-129266562:-] 0.5739 123 0 -6.78 -0.1147 MIMAT0000741 mmu-miR-377 231760 Rimbp2 ugUUUUCA--ACGGA--AACACACUa |||:|| | ||| ||||||| uaAAAGGUCGUUCCUCGGUGUGUGAa 2 21 3429 3454 [mm9:5:129263743-129263768:-] 0.6029 154 7 -16.65 -0.1068 MIMAT0000766 mmu-miR-335-5p 231760 Rimbp2 uguaAAAAGCAAUAACGAGAACu ||||| : ||||||| gucaUUUUC-ACGCGGCUCUUGa 2 20 2695 2716 [mm9:5:129264481-129264502:-] 0.6398 145 7 -18.14 -0.2231 MIMAT0004745 mmu-miR-384-5p 231760 Rimbp2 ugUAACGGA--UC-CUUAACAAAUGu ||| |:| || : |||||||| auAUUUCUUAAAGCUGUUUGUUUACa 2 22 800 825 [mm9:5:129266372-129266397:-] 0.5524 151 7 -12.39 -0.4115 MIMAT0004745 mmu-miR-384-5p 231760 Rimbp2 ugUAACGGA--UC-CUUAACAAAUGu ||| |:| || : |||||||| auAUUUCUUAAAGCUGUUUGUUUACa 2 22 301 326 [mm9:5:129266372-129266397:-] 0.5524 151 7 -12.39 -1.0629 MIMAT0003450 mmu-miR-488 231760 Rimbp2 cugguucuuugucGGAAAGUu ||||||| uuagcuuucuguuCCUUUCAu 2 9 3056 3076 [mm9:5:129264121-129264141:-] 0.5066 140 7 -9.11 -0.4062 MIMAT0003456 mmu-miR-495 231760 Rimbp2 uucuucacgugguACAAACAAa |||||||| uauuucuuaaagcUGUUUGUUu 2 10 801 822 [mm9:5:129266375-129266396:-] 0.5524 145 7 -8.93 -0.1872 MIMAT0003456 mmu-miR-495 231760 Rimbp2 uucuucacgugguACAAACAAa |||||||| uauuucuuaaagcUGUUUGUUu 2 10 302 323 [mm9:5:129266375-129266396:-] 0.5524 145 7 -8.93 -0.7688 MIMAT0003482 mmu-miR-499 231760 Rimbp2 uuUGUAGUGACGUUCAGAAUu ||| ||| |: ||||||| ggACAGCACGGU-AGUCUUAa 2 20 574 593 [mm9:5:129266604-129266623:-] 0.5806 161 7 -16.72 -0.1075 MIMAT0003482 mmu-miR-499 231760 Rimbp2 uuuGUAGUGACGUUC-AGAAUu |||||||||:|| ||||| cgcCAUCACUGCGAGUUCUUAu 2 19 397 418 [mm9:5:129266779-129266800:-] 0.7070 150 0 -25.60 -0.2534 MIMAT0003482 mmu-miR-499 231760 Rimbp2 uuUGUAGUGACGUUCAGAAUu ||| ||| |: ||||||| ggACAGCACGGU-AGUCUUAa 2 20 75 94 [mm9:5:129266604-129266623:-] 0.5806 161 7 -16.72 -0.5062 MIMAT0003482 mmu-miR-499 231760 Rimbp2 uuUGUAGUGACGUUCAGAAUu ||| ||| |: ||||||| ggACAGCACGGU-AGUCUUAa 2 20 75 94 [mm9:5:129266604-129266623:-] 0.5806 161 7 -16.72 -0.5531 MIMAT0004853 mmu-miR-874 231760 Rimbp2 agCCAGGGAG----CCC-GGUCCC-GUc |||:|||| ||| :||||| || uaGGUUCCUCCCGAGGGUUCAGGGACAg 2 21 2099 2126 [mm9:5:129265071-129265098:-] 0.7907 126 0 -34.19 -0.1173 MIMAT0004858 mmu-miR-18b 231760 Rimbp2 gauugUCGUGAUCUAC-GUGGAAu |||| || | |||||| aagugAGCAACCGAAGACACCUUa 2 19 521 544 [mm9:5:129266653-129266676:-] 0.6688 122 6 -15.13 -0.2404 MIMAT0004858 mmu-miR-18b 231760 Rimbp2 gauugUCGUGAUCUAC-GUGGAAu |||| || | |||||| aagugAGCAACCGAAGACACCUUa 2 19 22 45 [mm9:5:129266653-129266676:-] 0.6688 122 6 -15.13 -0.8633 MIMAT0004858 mmu-miR-18b 231760 Rimbp2 gauugUCGUGAUCUAC-GUGGAAu |||| || | |||||| aagugAGCAACCGAAGACACCUUa 2 19 22 45 [mm9:5:129266653-129266676:-] 0.6688 122 6 -15.13 -0.8033 MIMAT0004936 mmu-miR-873 231760 Rimbp2 uccuCUGAGUGUU-CAAGGACg |:| ||||: ||||||| aauuGGCACACAGUGUUCCUGa 2 18 1405 1426 [mm9:5:129265771-129265792:-] 0.4621 160 7 -21.01 -0.1693 MIMAT0005850 mmu-miR-1192 231760 Rimbp2 uuaaaccagacaaACAAACAAa |||||||| uauuucuuaaagcUGUUUGUUu 2 10 801 822 [mm9:5:129266375-129266396:-] 0.5524 145 7 -13.25 -0.1907 MIMAT0005850 mmu-miR-1192 231760 Rimbp2 uuaaaccagacaaACAAACAAa |||||||| uauuucuuaaagcUGUUUGUUu 2 10 302 323 [mm9:5:129266375-129266396:-] 0.5524 145 7 -13.25 -0.7761

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G064304 Rimbp2 Mus musculus 231760

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rimbp2 mmu-miR-218 beg:385 end:402 pic:3' TGTACCAATCTAGT---TCGTGTT 5'& .||| ||||||| &5' ----------GTCAAAAAGCACAA 3' Rimbp2 mmu-miR-669d beg:316 end:330 pic:3' TGTATATGTACGTGTGTGTTCA 5'& ||. .||||||| &5' ---------TGTTTACACAAG- 3' Rimbp2 mmu-miR-221 beg:0 end:14 pic:3' CTTTGGGTCGTCTGTTACATCGA 5'& |||.| ||||||| &5' ---------CAGGC-ATGTAGC- 3' Rimbp2 mmu-miR-1928 beg:1 end:14 pic:3' CTCGACCGTTACATCGA 5'& ||| ||||||| &5' -----GGC-ATGTAGC- 3' Rimbp2 mmu-miR-375 beg:229 end:248 pic:3' AGTGCGCTCGGCTT-GCTTGTTT 5'& || || ||||||| &5' ------GAATCGTCTCGAACAA- 3' Rimbp2 mghv-miR-M1-3 beg:179 end:195 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& ..|| ||||||| &5' ------GGCTAT--CTCACCT- 3' Rimbp2 mcmv-miR-m107-1-3p beg:12 end:31 pic:3' CTCGCCAGTGAGCTGCGCTCGT 5'& ||||| |.||||| &5' -----GTCACGTAA-GTGAGCA 3' Rimbp2 mmu-let-7b beg:180 end:192 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .|||.|||| &5' -------------GCTATCTCA 3' Rimbp2 mmu-miR-125a-3p beg:179 end:196 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& |||| |.|||||||| &5' GGCT-------ATCTCACCTG- 3' Rimbp2 mmu-miR-127star beg:176 end:201 pic:3' TAGTCTCGG--GAGAC--TCGAAGTC 5'& ||.|| ||. ||| .|.||||| &5' ATTAG-GCTATCTCACCTGGTTTCAG 3' Rimbp2 mmu-miR-130bstar beg:102 end:122 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& ||.| || ||||||| &5' -GTGG-GCTTAAA-GAAAGAG- 3' Rimbp2 mmu-miR-138 beg:324 end:342 pic:3' GCCGGACTAAGTGT-----TGTGGTCGA 5'& |||| .|.||||| &5' ----------CACAAGAGTGCGCCAGC- 3' Rimbp2 mmu-miR-152 beg:355 end:375 pic:3' GGTTCAAGACAGTACGTGACT 5'& .|||| ||||.|| &5' --GAGTTGCCTATTGCATTG- 3' Rimbp2 mmu-miR-23a beg:95 end:108 pic:3' CCTTTAGGGACCGTTACACTA 5'& | |||||||. &5' ----------GTCAATGTGG- 3' Rimbp2 mmu-miR-30a beg:399 end:420 pic:3' GAAGGTC-AGCTCCTACAAATGT 5'& ||.| || .||||||| &5' ---CCGGATCCAT-GTGTTTAC- 3' Rimbp2 mmu-miR-30b beg:309 end:327 pic:3' TCGACTCACATCCTACAAATGT 5'& ||||| |||||||| &5' AGCTGTT-------TGTTTACA 3' Rimbp2 mmu-miR-30c beg:310 end:327 pic:3' CGACTCTCACATCCTACAAATGT 5'& |||| |||||||| &5' GCTGTT---------TGTTTACA 3' Rimbp2 mmu-miR-30e beg:399 end:420 pic:3' GAAGGTC-AGTTCCTACAAATGT 5'& ||.| || .||||||| &5' ---CCGGATCCAT-GTGTTTAC- 3' Rimbp2 mmu-miR-30e beg:302 end:327 pic:3' GAAGGTCAGTT-CCTACAAATGT 5'& |||. | |||||||| &5' -TTCTTAAAGCTGTTTGTTTACA 3' Rimbp2 mmu-miR-382 beg:229 end:252 pic:3' GCTTAGGTGGTGCTTGTTGAAG 5'& |||| | | |||||||.||. &5' -GAAT-CGTCTCGAACAATTTT 3' Rimbp2 mmu-miR-384-5p beg:310 end:327 pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||. ||||||||| &5' -----GCTGT----TTGTTTACA 3' Rimbp2 mmu-miR-429 beg:161 end:182 pic:3' TGCCGTAATGGTCTG----TCATAAT 5'& |. ||| ||||||| &5' --------ATTGGACCTAAAGTATTA 3' Rimbp2 mmu-miR-488 beg:122 end:144 pic:3' CTGGTTCTTTGT-CGGAAAGTT 5'& || ||||||.| |.| |||| &5' GAA-AAGAAATATGTC--TCAA 3' Rimbp2 mmu-miR-496 beg:330 end:351 pic:3' CTCTAAC-CGGTACATTATGAGT 5'& || |||| .|||||| &5' -----TGCGCCAGCGTGTACTCA 3' Rimbp2 mmu-miR-539 beg:288 end:310 pic:3' TGTGTGGT-TCCTAT--TAAAGAGG 5'& ||| .||| ||||||. &5' ----ACCTTGGGAACATATTTCTT- 3' Rimbp2 mmu-miR-692 beg:337 end:359 pic:3' CTCACTCCGCGA------GTTTCTCTA 5'& |||. |||.|||| &5' -------GCGTGTACTCACAAGGAGA- 3' Rimbp2 mmu-miR-693-3p beg:297 end:318 pic:3' AATGTCGGTGT--AGACTTTCGACG 5'& ||.| ||| |||||||. &5' -------CATATTTCTTAAAGCTGT 3' Rimbp2 mmu-miR-704 beg:120 end:141 pic:3' GATCCTCG--TCTCGTGTACAGA 5'& ||| ||| |.|||||| &5' ----GAGAAAAGAA-ATATGTCT 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rimbp2 RAID00006454 mmu-miR-335-5p miRNA MIMAT0000766 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00045740 mmu-miR-7026-3p miRNA MIMAT0027957 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00284015 mmu-miR-375-3p miRNA MIMAT0000739 Rimbp2 mRNA 231760 Prediction 0.2202 Rimbp2 RAID00333008 mmu-miR-490-5p miRNA MIMAT0017261 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00444695 mmu-miR-129b-3p miRNA MIMAT0029863 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00462649 mmu-miR-7076-3p miRNA MIMAT0028059 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00531075 mmu-miR-101a-3p miRNA MIMAT0000133 Rimbp2 mRNA 231760 Prediction 0.2202 Rimbp2 RAID00595431 mmu-miR-30e-5p miRNA MIMAT0000248 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID00687754 mmu-miR-142a-3p miRNA MIMAT0000155 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00708736 mmu-miR-30b-5p miRNA MIMAT0000130 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID00743533 mmu-miR-7071-3p miRNA MIMAT0028049 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00904961 mmu-miR-296-3p miRNA MIMAT0004576 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00905298 mmu-miR-222-3p miRNA MIMAT0000670 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID00921659 mmu-miR-191-5p miRNA MIMAT0000221 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01073969 mmu-miR-5127 miRNA MIMAT0020638 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01223907 mmu-miR-495-3p miRNA MIMAT0003456 Rimbp2 mRNA 231760 Prediction 0.2202 Rimbp2 RAID01228198 mmu-miR-5101 miRNA MIMAT0020608 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01231066 mmu-miR-532-3p miRNA MIMAT0004781 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01347306 mmu-miR-33-5p miRNA MIMAT0000667 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01351355 mmu-miR-125a-3p miRNA MIMAT0004528 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01477022 mmu-miR-1192 miRNA MIMAT0005850 Rimbp2 mRNA 231760 Prediction 0.2202 Rimbp2 RAID01611178 mmu-miR-669d-5p miRNA MIMAT0005833 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01652701 mmu-miR-340-5p miRNA MIMAT0004651 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01669388 mmu-miR-7002-3p miRNA MIMAT0027907 Rimbp2 mRNA 231760 Prediction 0.2202 Rimbp2 RAID01807507 mmu-miR-92b-3p miRNA MIMAT0004899 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01820711 mmu-miR-32-5p miRNA MIMAT0000654 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID01912040 mmu-miR-377-3p miRNA MIMAT0000741 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02062243 mmu-miR-183-5p miRNA MIMAT0000212 Rimbp2 mRNA 231760 Prediction 0.2202 Rimbp2 RAID02125150 mmu-miR-30d-5p miRNA MIMAT0000515 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID02153705 mmu-miR-18b-5p miRNA MIMAT0004858 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02155910 mmu-miR-874-3p miRNA MIMAT0004853 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02204407 mmu-miR-203-3p miRNA MIMAT0000236 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02205868 mmu-miR-6355 miRNA MIMAT0025098 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02307702 mmu-miR-221-3p miRNA MIMAT0000669 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02388668 mmu-miR-7034-3p miRNA MIMAT0027973 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02548879 mmu-miR-449a-3p miRNA MIMAT0017180 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02673307 mmu-miR-6939-3p miRNA MIMAT0027779 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02711115 mmu-miR-30a-5p miRNA MIMAT0000128 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID02838992 mmu-miR-6481 miRNA MIMAT0027339 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02872754 mmu-let-7d-5p miRNA MIMAT0000383 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID02924767 mmu-miR-325-3p miRNA MIMAT0004640 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03069703 mmu-let-7f-5p miRNA MIMAT0000525 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03075718 mmu-miR-182-5p miRNA MIMAT0000211 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03111729 mmu-miR-30c-5p miRNA MIMAT0000514 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID03118002 mmu-miR-186-5p miRNA MIMAT0000215 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03175980 mmu-miR-129-5p miRNA MIMAT0000209 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03189678 mmu-miR-499-5p miRNA MIMAT0003482 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID03195673 mmu-miR-7003-5p miRNA MIMAT0027910 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03250096 mmu-miR-216a-5p miRNA MIMAT0000662 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03349211 mmu-miR-384-5p miRNA MIMAT0004745 Rimbp2 mRNA 231760 Prediction 0.2455 Rimbp2 RAID03406555 mmu-miR-218-5p miRNA MIMAT0000663 Rimbp2 mRNA 231760 Prediction 0.2381 Rimbp2 RAID03626681 mmu-miR-101b-3p miRNA MIMAT0000616 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03673147 mmu-miR-362-3p miRNA MIMAT0004684 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03722961 mmu-miR-6975-3p miRNA MIMAT0027853 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03726507 mmu-miR-693-3p miRNA MIMAT0004189 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03781945 mmu-miR-7673-5p miRNA MIMAT0029852 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03850559 mmu-miR-488-3p miRNA MIMAT0003450 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03882010 mmu-miR-21a-5p miRNA MIMAT0000530 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03892024 mmu-miR-6896-3p miRNA MIMAT0027693 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID03948194 mmu-miR-181b-5p miRNA MIMAT0000673 Rimbp2 mRNA 231760 Prediction 0.1828 Rimbp2 RAID04061721 mmu-miR-873a-5p miRNA MIMAT0004936 Rimbp2 mRNA 231760 Prediction 0.1828