DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Usp30 ATTTA 101-1654 1974-1978 Usp30 WTATTTATW 101-1654 1972-1980 Usp30 WWATTTAWW 101-1654 1972-1980

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000240 mmu-miR-207 100756 Usp30 cucccuccucucggucCUCUUCg |||||| auuaaaggcaacaauuGAGAAGa 2 8 374 396 [mm9:5:114572171-114572193:+] 0.6499 120 6 -11.35 -0.1557 MIMAT0004573 mmu-miR-293* 100756 Usp30 guuuUACAGUGUGUCAA-ACUCa :| || ||: ||| |||| cuuuGUUUCCCAUUGUUGUGAGa 2 19 405 427 [mm9:5:114572202-114572224:+] 0.5868 122 0 -8.52 -0.3391 MIMAT0004580 mmu-miR-34c* 100756 Usp30 ggaccgacacaccAAUCACUaa ||||||| uuauugacaagaaUUAGUGAaa 3 10 350 371 [mm9:5:114572147-114572168:+] 0.6499 125 0 -6.65 -0.3016 MIMAT0004581 mmu-miR-34b-3p 100756 Usp30 cuACCGUCACCUCAAUCACUaa || || || ||||||| auUGACA--AGAAUUAGUGAaa 3 21 352 371 [mm9:5:114572149-114572168:+] 0.6499 133 0 -8.15 -0.2990 MIMAT0004626 mmu-miR-18a* 100756 Usp30 gucuUCCUCGUGA--AUCCCGUCa ||| |: || ||||||| ugcuAGGUGUUCUCAGAGGGCAGc 2 19 264 287 [mm9:5:114572061-114572084:+] 0.5579 149 7 -19.79 -0.1197 MIMAT0004636 mmu-miR-93* 100756 Usp30 gcccuucACGAUCGAGUC-GUCa |||| ||||| ||| uggaccuUGCUUUCUCAGUCAGc 2 16 880 902 [mm9:5:114572677-114572699:+] 0.5241 123 0 -19.25 -0.2390 MIMAT0004640 mmu-miR-325 100756 Usp30 aacuauccuCCACGAGUUAUUu ||| :||||||| gacucucauGGU-UUCAAUAAg 2 14 993 1013 [mm9:5:114572790-114572810:+] 0.5327 147 7 -10.82 -0.3662 MIMAT0004664 mmu-miR-214* 100756 Usp30 cgUGUCGUUCACA----UCU-GUCCGu ||||| :| || ||| ||||| ugACAGCUGGGGUAGGAAGAGCAGGCc 2 21 830 856 [mm9:5:114572627-114572653:+] 0.5275 123 0 -21.80 -0.1322 MIMAT0000672 mmu-miR-199b* 100756 Usp30 cuUGUCCAUCAGAUUUGUGACCc |:| | | | : ||||||| caAUAAGCAAACGGUACACUGGg 2 22 1007 1029 [mm9:5:114572804-114572826:+] 0.5327 149 7 -18.99 -0.1070 MIMAT0004704 mmu-miR-335-3p 100756 Usp30 ccaguccUCGUUAUUACUUUUu || :: |||||||| accugacAGAGGCAAUGAAAAg 2 16 204 225 [mm9:5:114572001-114572022:+] 0.5372 151 7 -15.22 -0.2223 MIMAT0001094 mmu-miR-412 100756 Usp30 gcCGAUCACCUGGU-CCACUu || || || ||| ||||| gaGCCAG-GGCCCAUGGUGAg 2 19 13 32 [mm9:5:114571810-114571829:+] 0.4858 124 0 -20.12 -0.1806 MIMAT0002889 mmu-miR-532-5p 100756 Usp30 ugccaggauGUGAGUUCCGUac :|:| |||||| uagugaaauUAUUAAAGGCAac 3 14 364 385 [mm9:5:114572161-114572182:+] 0.6499 129 0 -9.85 -0.2005 MIMAT0003173 mmu-miR-547 100756 Usp30 gaGUGAGUUUCUAC-AUGGUUc :| |:||| ||| |||||| ugUAAUUAAAAAUGAUACCAAa 2 20 1112 1133 [mm9:5:114572909-114572930:+] 0.5506 135 6 -10.25 -0.9070 MIMAT0003373 mmu-miR-302b* 100756 Usp30 ucuuucguaaggguacAAUUUCa |||||| agaauuagugaaauuaUUAAAGg 2 8 359 381 [mm9:5:114572156-114572178:+] 0.6499 120 6 -4.94 -0.1084 MIMAT0003375 mmu-miR-302c* 100756 Usp30 cguccauugggguacAAUUUCg |||||| gaauuagugaaauuaUUAAAGg 2 8 360 381 [mm9:5:114572157-114572178:+] 0.6499 120 6 -7.10 -0.1084 MIMAT0005460 mmu-miR-1224 100756 Usp30 gagguGGAGGGGUC-AGGAGUg |||:|| :| |||||| cuuguCCUUCCAGGCUCCUCAg 2 17 470 491 [mm9:5:114572267-114572288:+] 0.5236 128 6 -22.88 -0.1355 MIMAT0004820 mmu-miR-744* 100756 Usp30 uccaacuccAAUCACCGUUGUc ||| ||||||| gugaaauuaUUAAAGGCAACAa 2 14 366 387 [mm9:5:114572163-114572184:+] 0.6499 149 7 -10.03 -1.3076 MIMAT0003733 mmu-miR-665 100756 Usp30 ucCCUGGAGUCGGAG-GACCa ||:: |||:||| |||| caGGGUGGCAGUCUCUCUGGa 2 19 863 883 [mm9:5:114572660-114572680:+] 0.5275 126 0 -26.70 -0.1421 MIMAT0003892 mmu-miR-762 100756 Usp30 cgagacagggccggGGUCGGGg ||||||| ----------caggCCAGCCCa 2 9 1 12 [mm9:5:114571798-114571809:+] 0.5423 140 7 -16.61 -0.4228 MIMAT0014816 mmu-miR-3099 100756 Usp30 agGGGUUGGAGAG---AGAUCGGAu :|: |||:|| ||||||| ccUCUCCCCUUUCCAGACUAGCCUc 2 21 1030 1054 [mm9:5:114572827-114572851:+] 0.5327 147 7 -23.85 -0.1327 MIMAT0003898 mmu-miR-760 100756 Usp30 agggguGUCUGGGUCUCGGc ||| ||||||||| -caggcCAG-CCCAGAGCCa 2 15 1 18 [mm9:5:114571798-114571815:+] 0.5423 156 7 -23.69 -0.4682 MIMAT0003898 mmu-miR-760 100756 Usp30 aggggUGUCU-GGGUC-UCGGc :|||| ||||| |||| aagaaGCAGAUCCCAGAAGCCa 2 16 223 244 [mm9:5:114572020-114572041:+] 0.5456 126 0 -22.27 -0.2248 MIMAT0003741 mmu-miR-674* 100756 Usp30 aacaagacucuaccCUCGACAc ||||||| ugaucacucuuccuGAGCUGUg 2 9 712 733 [mm9:5:114572509-114572530:+] 0.4950 140 7 -14.19 -0.2898 MIMAT0003461 mmu-miR-683 100756 Usp30 cucCUGUGUCGAAUGUC--GUCc |||| :|:|||||| ||| cacGACAGGGUUUACAGGCCAGa 2 19 790 812 [mm9:5:114572587-114572609:+] 0.5199 122 0 -19.44 -0.1361 MIMAT0003466 mmu-miR-687 100756 Usp30 aguaacgacguaAGGUCCUAUc ||||||||| agguccacacugUCCAGGAUAa 2 11 31 52 [mm9:5:114571828-114571849:+] 0.4622 150 7 -16.91 -0.3110 MIMAT0003495 mmu-miR-705 100756 Usp30 acGGGUGGGGUGGAGGGUGg |:|| |||||||||| gcCUCAAGACACCUCCCACc 2 19 635 654 [mm9:5:114572432-114572451:+] 0.4989 162 7 -32.75 -0.1400 MIMAT0003510 mmu-miR-717 100756 Usp30 ucUCUUCCAUAG---AGACAGA-CUc :|||| |:|| | ||||| || cuGGAAGAUGUCCUGUGUGUCUAGAg 2 21 172 197 [mm9:5:114571969-114571994:+] 0.5287 123 0 -17.56 -0.2256 MIMAT0004237 mmu-miR-742 100756 Usp30 aaaUGGGUCGUACCACCGAAAg |:|| ||| ||||||| aaaAUCCUGCAGUUUGGCUUUa 2 20 949 970 [mm9:5:114572746-114572767:+] 0.4989 159 7 -19.39 -0.3994 MIMAT0004842 mmu-miR-879 100756 Usp30 ccgaaucucgauaUUCGGAGa ||||||| uuaucuccucccaAAGCCUCa 2 9 620 640 [mm9:5:114572417-114572437:+] 0.4998 140 7 -11.09 -0.6271 MIMAT0004850 mmu-miR-883b-5p 100756 Usp30 acuGACGAUGG---GUAAGAGUCAu ||| ||| | |||||||| ucuCUG-GACCUUGCUUUCUCAGUc 2 20 876 899 [mm9:5:114572673-114572696:+] 0.5275 148 7 -19.07 -0.2273 MIMAT0004863 mmu-miR-220 100756 Usp30 uucACAGA--CUGUGACACCACc || || ||| ||||||| gaaUGCCUAAAACAGUGUGGUGg 2 19 512 534 [mm9:5:114572309-114572331:+] 0.5122 153 7 -21.28 -0.1096 MIMAT0004867 mmu-miR-327 100756 Usp30 uaGGAGUACGG----GGAGUUCa :||| | || ||||||| uaUCUCCUCCCAAAGCCUCAAGa 2 18 621 643 [mm9:5:114572418-114572440:+] 0.4998 144 7 -17.64 -0.4573 MIMAT0004870 mmu-miR-453 100756 Usp30 acGUUCGAGUGAUACUCCGUUGga ::| |:|:|| ||||||| agUGAAAUUAUUA-AAGGCAACaa 3 23 365 387 [mm9:5:114572162-114572184:+] 0.6499 136 0 -15.27 -0.2878 MIMAT0004882 mmu-miR-466f-3p 100756 Usp30 cacacauacacACACACAUAc | ||||||| gcccucagccuUCUGUGUAUu 2 11 98 118 [mm9:5:114571895-114571915:+] 0.5287 142 7 -5.92 -0.1664 MIMAT0004894 mmu-miR-574-3p 100756 Usp30 acacccACACACGUA-CUCGCAc ||||||: | |||||| auguccUGUGUGUCUAGAGCGUc 2 17 179 201 [mm9:5:114571976-114571998:+] 0.5287 132 6 -20.09 -0.1423 MIMAT0004935 mmu-miR-872* 100756 Usp30 ucCUCCGAUGACGUUAUCAAGu ||||| | |||||||| caGAGGCCAAAAGAAUAGUUCa 2 21 489 510 [mm9:5:114572286-114572307:+] 0.5236 160 7 -18.97 -0.7277 MIMAT0004940 mmu-miR-511 100756 Usp30 acUCACGUCUCGU--UUUCCGUa |||| | | :| ||||||| uuAGUG-AAAUUAUUAAAGGCAa 2 20 363 384 [mm9:5:114572160-114572181:+] 0.6499 148 7 -12.93 -1.2833 MIMAT0005830 mmu-miR-466l 100756 Usp30 uuaUACACACGUA-C-AUAAAUAu || | ||| | ||||||| gacAUUUCACCAUAGAUAUUUAUu 2 20 303 326 [mm9:5:114572100-114572123:+] 0.6039 145 7 -4.63 -1.0561 MIMAT0005834 mmu-miR-466i 100756 Usp30 aucACACAUACACACACACAUa ||| || | ||||||| agaUGU-UAGCUAAGUGUGUAa 2 20 1096 1116 [mm9:5:114572893-114572913:+] 0.5506 149 7 -9.77 -1.2229 MIMAT0005836 mmu-miR-1186 100756 Usp30 guacggaaauuaagGUCGUGAg ||||||| gagccagacccacaCAGCACUg 2 9 140 161 [mm9:5:114571937-114571958:+] 0.5287 140 7 -14.81 -0.5220 MIMAT0005851 mmu-miR-1193 100756 Usp30 cuAUCAUUUUG---CCCACUGGAu | ||:|:|| | ||||||| ugUUGUGAGACCAAGCGUGACCUg 2 20 418 441 [mm9:5:114572215-114572238:+] 0.5236 154 7 -18.87 -0.1050 MIMAT0007863 mmu-miR-1902 100756 Usp30 uuCAGUACGGAUGACGUGGAGa | ::||:| ||||||||| gaGCUGUGUCAUCUGCACCUCu 2 21 726 747 [mm9:5:114572523-114572544:+] 0.4952 164 7 -27.70 -0.2438 MIMAT0007874 mmu-miR-1904 100756 Usp30 ggagggaggucucCUCGUCUUg |||||||| cagcaugauaccuGAGCAGAAg 2 10 921 942 [mm9:5:114572718-114572739:+] 0.4929 145 7 -14.46 -0.1515 MIMAT0009415 mmu-miR-1948 100756 Usp30 gacaugcucacgagACGGAUUu ||||||| gaauaguucaagaaUGCCUAAa 2 9 501 522 [mm9:5:114572298-114572319:+] 0.5236 140 7 -12.28 -0.9135 MIMAT0009433 mmu-miR-1960 100756 Usp30 ucgggagaagauUGUCGUGACc ||||||||| agccagacccacACAGCACUGc 2 11 141 162 [mm9:5:114571938-114571959:+] 0.5287 150 7 -20.19 -0.1653 MIMAT0009459 mmu-miR-1982* 100756 Usp30 ggaGGGGUCCUG-GGAGGGUu ||:|| ||| ||||||| aagCCUCAAGACACCUCCCAc 2 18 633 653 [mm9:5:114572430-114572450:+] 0.4989 164 7 -27.00 -0.2451 MIMAT0009459 mmu-miR-1982* 100756 Usp30 ggaGGGGUCCUGGGAGGGUu ||::| :||||||| aaaCCUUA-UCUCCUCCCAa 2 18 615 633 [mm9:5:114572412-114572430:+] 0.4998 143 7 -22.50 -0.9946 MIMAT0011214 mmu-miR-2138 100756 Usp30 uaAGGCGGUUCGGG--CAAGGGAa |::| :|| |:| ||||||| cuUUUG-UAAUCUCGAGUUCCCUg 2 21 666 688 [mm9:5:114572463-114572485:+] 0.5078 149 7 -15.93 -0.1459 MIMAT0011216 mmu-miR-2140 100756 Usp30 uggugguucUAGACGUGGa ||||||||| agcugugucAUCUGCACCu 2 11 727 745 [mm9:5:114572524-114572542:+] 0.4952 150 7 -17.56 -0.3246 MIMAT0011217 mmu-miR-2141 100756 Usp30 uugaaaagaCUGUGGAGGa ||||||||| aagccucaaGACACCUCCc 2 11 633 651 [mm9:5:114572430-114572448:+] 0.4989 150 7 -18.37 -0.2072 MIMAT0013803 mmu-miR-2861 100756 Usp30 ggcgggcggcggUCCGGGg |||||| uuuuuaauaaggAGGCCCg 2 8 325 343 [mm9:5:114572122-114572140:+] 0.6499 120 6 -13.51 -0.3148 MIMAT0000134 mmu-miR-124 100756 Usp30 ccguaaguggcgCACGGAAu ||||||| ugagaagaaaaaGUGCCUUu 2 9 389 408 [mm9:5:114572186-114572205:+] 0.6499 140 7 -11.40 -0.9558 MIMAT0000142 mmu-miR-9 100756 Usp30 aguAUGUCGAUCUAUUGGUUUcu || | | ||| |||||| aauUAAAAAU-GAU-ACCAAAuu 3 21 1115 1135 [mm9:5:114572912-114572932:+] 0.5506 128 0 -5.92 -0.1015 MIMAT0000159 mmu-miR-149 100756 Usp30 ccCUCACUUCU---GUG---CCUCGGUCu ||| | ||: ||| |||||||| cuGAGAGCAGGCUCCACAAGGGAGCCAGa 2 22 119 147 [mm9:5:114571916-114571944:+] 0.5287 151 7 -24.34 -0.1854 MIMAT0000229 mmu-miR-199a-5p 100756 Usp30 cuUGUCCAUCAGACUUGUGACCc |:| | | | | ||||||| caAUAAGCAAACGGUACACUGGg 2 22 1007 1029 [mm9:5:114572804-114572826:+] 0.5327 153 7 -18.99 -0.1070 MIMAT0000236 mmu-miR-203 100756 Usp30 gaucACCAGGAUUUGUAAAGUg | | || :|||||||| uggcUAGCCCCUGACAUUUCAc 2 19 291 312 [mm9:5:114572088-114572109:+] 0.5579 154 7 -21.30 -0.2969 MIMAT0000366 mmu-miR-290-5p 100756 Usp30 uuucAC-GGGGGUAUCAA-ACUCa || ::||||| ||| |||| ccuuUGUUUCCCAUUGUUGUGAGa 2 19 404 427 [mm9:5:114572201-114572224:+] 0.5868 129 0 -16.45 -0.3391 MIMAT0000381 mmu-miR-34c 100756 Usp30 cgUUAGUC--GAU-UGAUGUGACGGa |: ||| | | || :||||||| ggAGCCAGACCCACACAGCACUGCCa 2 22 139 164 [mm9:5:114571936-114571961:+] 0.5287 151 7 -17.35 -0.2321 MIMAT0000382 mmu-miR-34b-5p 100756 Usp30 ugUUAGUC--GAU-UAAUGUGACGGa |: ||| | | | :||||||| ggAGCCAGACCCACACAGCACUGCCa 2 22 139 164 [mm9:5:114571936-114571961:+] 0.5287 143 7 -15.29 -0.2321 MIMAT0000520 mmu-miR-208a 100756 Usp30 uguuCGAAAAACGAGCAGAAUa |: | | | ||||||| cuguGUGUCUAGAGCGUCUUAc 2 19 184 205 [mm9:5:114571981-114572002:+] 0.5287 146 7 -10.20 -0.1154 MIMAT0000542 mmu-miR-34a 100756 Usp30 ugUUGGUCGAUUCUGUGACGGu :||| | || ||||||| caGACCCACACAG-CACUGCCa 2 21 144 164 [mm9:5:114571941-114571961:+] 0.5287 150 7 -19.51 -0.2163 MIMAT0000559 mmu-miR-326 100756 Usp30 ugaccuccuuccCGGGUCUCc |||||||| -----caggccaGCCCAGAGc 2 10 1 16 [mm9:5:114571798-114571813:+] 0.5423 145 7 -18.13 -0.1504 MIMAT0000565 mmu-miR-328 100756 Usp30 ugccuucccgucucUCCCGGUc ||||||| ugcaguuuggcuuuAGGGCCAu 2 9 956 977 [mm9:5:114572753-114572774:+] 0.4989 140 7 -16.50 -0.1839 MIMAT0000567 mmu-miR-329 100756 Usp30 uuUUUCCAAUCGACCCACACAa |:| ||||||| |||||| cuAGAUGUUAGCUAAGUGUGUa 2 21 1094 1115 [mm9:5:114572891-114572912:+] 0.5506 148 6 -18.35 -0.1211 MIMAT0004642 mmu-miR-330 100756 Usp30 cggauUCUGUGUCCGGGUCUCu ||:| || |||||||| ----cAGGC-CA-GCCCAGAGc 2 18 1 16 [mm9:5:114571798-114571813:+] 0.5423 153 7 -22.57 -0.1504 MIMAT0000584 mmu-miR-339-5p 100756 Usp30 gcacUCGAGGACCUCCUGUCCCu ||:| | | ||||||| uaguAGUUGC-CCACGACAGGGu 2 20 779 800 [mm9:5:114572576-114572597:+] 0.5199 145 7 -18.57 -0.1548 MIMAT0000670 mmu-miR-222 100756 Usp30 uggguCAUCGGUCUAC-AUCGa ||| |:||||| |||| cugacGUACCUAGAUGUUAGCu 2 17 1085 1106 [mm9:5:114572882-114572903:+] 0.5506 132 0 -18.60 -0.5688 MIMAT0000677 mmu-miR-7a 100756 Usp30 uguugUUUUAGUGAUCA-GAAGGu :||| | || || ||||| gcuggGAAAGC-CUUGUCCUUCCa 2 19 459 481 [mm9:5:114572256-114572278:+] 0.5236 120 0 -14.13 -0.2124 MIMAT0004684 mmu-miR-362-3p 100756 Usp30 acuuaggaacuugucCACACAa |||||| cuagauguuagcuaaGUGUGUa 2 8 1094 1115 [mm9:5:114572891-114572912:+] 0.5506 120 6 -8.28 -0.1272 MIMAT0000741 mmu-miR-377 100756 Usp30 uguuuucaacggaaACACACUa ||||||| ccaugcucuaagagUGUGUGAc 2 9 974 995 [mm9:5:114572771-114572792:+] 0.5327 140 7 -12.21 -0.1935 MIMAT0000741 mmu-miR-377 100756 Usp30 uguuuucAACGGAAAC-ACACUa || || ||| ||||| ccuuuguUUCCCAUUGUUGUGAg 2 16 404 426 [mm9:5:114572201-114572223:+] 0.5868 123 0 -9.79 -0.4456 MIMAT0004750 mmu-miR-425 100756 Usp30 aguugcccucACUAG-CACAGUAa ||| | ||||||| ucacucuuccUGAGCUGUGUCAUc 2 14 715 738 [mm9:5:114572512-114572535:+] 0.4952 148 7 -13.33 -0.1231 MIMAT0001542 mmu-miR-449a 100756 Usp30 ugGUC-GAUUGUUAUGUGACGGu ||| | ||| :||||||| gcCAGACCCACACAGCACUGCCa 2 21 142 164 [mm9:5:114571939-114571961:+] 0.5287 155 7 -24.71 -0.2300 MIMAT0003112 mmu-miR-489 100756 Usp30 cgacgguauAUACACCACAGUAa |: | ||||||| cacucuuccUGAGCUGUGUCAUc 2 15 716 738 [mm9:5:114572513-114572535:+] 0.4952 142 7 -11.48 -0.1268 MIMAT0003460 mmu-miR-449c 100756 Usp30 ggucgaucGUUACGUGACGGa || |||||||| cagacccaCACAGCACUGCCa 2 14 144 164 [mm9:5:114571941-114571961:+] 0.5287 149 7 -17.02 -0.2342 MIMAT0004858 mmu-miR-18b 100756 Usp30 gaUUGUC-GUGAUCUAC-GUGGAAu |:||| : | ||| | |||||| gaAGCAGAUCCCAGAAGCCACCUUu 2 22 225 249 [mm9:5:114572022-114572046:+] 0.5456 128 6 -16.32 -0.4203 MIMAT0005447 mmu-miR-449b 100756 Usp30 cggucgauUGUUGUGACGGa |||:||||||| agacccacACAGCACUGCCa 2 13 145 164 [mm9:5:114571942-114571961:+] 0.5287 156 7 -21.14 -0.2321 MIMAT0004939 mmu-miR-208b 100756 Usp30 uguuuggAAAACAAGCAGAAUa | | | ||||||| cugugugUCUAGAGCGUCUUAc 2 16 184 205 [mm9:5:114571981-114572002:+] 0.5287 143 7 -10.23 -0.1166

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G069377 Usp30 Mus musculus 100756

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Usp30 mmu-miR-511 beg:51 end:64 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| |||||||| &5' ---------AGC-AAAGGCAT 3' Usp30 mmu-miR-145 beg:159 end:177 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || ||| .||||||| &5' -------CCAGGGTGAACTGGA- 3' Usp30 mmu-miR-199a-5p beg:1013 end:1030 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& ||| ||| |||||||| &5' -AAC-GGT-------ACACTGGG 3' Usp30 mmu-miR-199bstar beg:1013 end:1030 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||| ||| |||||||| &5' -AAC-GGT-------ACACTGGG 3' Usp30 mmu-miR-483star beg:696 end:715 pic:3' TTCTGCCCTCCCC-TCCTCACT 5'& ||||| |||||||| &5' ------GGAGGACCAGGAGTGA 3' Usp30 mmu-miR-18astar beg:274 end:298 pic:3' GTCTTCC-TCGTGAATCCCG-TCA 5'& ||||.|| ||| ||| ||| || &5' CAGAGGGCAGC-CTTT-GGCTAG- 3' Usp30 mmu-miR-328 beg:961 end:977 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| ||||||| &5' -------GGCTTT-AGGGCCA- 3' Usp30 mmu-miR-2141 beg:639 end:651 pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||||||| &5' ---------GACACCTCC- 3' Usp30 mmu-miR-34c beg:150 end:164 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || .||||||| &5' -----------ACAGCACTGCC- 3' Usp30 mmu-miR-34b-5p beg:153 end:164 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& .||||||| &5' --------------GCACTGCC- 3' Usp30 mmu-miR-760 beg:2 end:18 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||| .||||||||| &5' ---CCA---GCCCAGAGCC- 3' Usp30 mmu-miR-687 beg:37 end:52 pic:3' AGTAACGACGTAAGGTCCTATC 5'& |||. |||||||| &5' ------CTGT---CCAGGATA- 3' Usp30 mcmv-miR-M95-1-5p beg:777 end:796 pic:3' GTTCGCTGTGTTCGGGTGCTGG 5'& ||. . ||||||||| &5' --AGTAGTT---GCCCACGAC- 3' Usp30 mmu-miR-331-3p beg:1054 end:1070 pic:3' AAGATCCTATCCGGGTCCCCG 5'& ||| || ||||||| &5' -----GGACAG--CCAGGGG- 3' Usp30 mmu-miR-326 beg:0 end:16 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& ||| |||||||| &5' -----AGGCCA-GCCCAGAG- 3' Usp30 mmu-miR-330 beg:0 end:16 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||.| || |||||||| &5' -----AGGC-CA-GCCCAGAG- 3' Usp30 mmu-miR-1982star beg:623 end:653 pic:3' GGAGGG-------GTCCTG-GGAGGGTT 5'& |||||| || ||| ||||||| &5' CCTCCCAAAGCCTCAAGACACCTCCCA- 3' Usp30 mmu-miR-674star beg:723 end:734 pic:3' AACAAGACTCTACCCTCGACAC 5'& |||||||| &5' --------------GAGCTGTG 3' Usp30 mmu-miR-141star beg:750 end:766 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& || |||||||| &5' ---------GCTTCGGAAGATG 3' Usp30 mmu-miR-744star beg:377 end:387 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||||||| &5' --------------GGCAACA- 3' Usp30 mmu-miR-1193 beg:819 end:832 pic:3' CTATCATTTTGCCCACTGGAT 5'& |||||||||. &5' -----------GGGTGACCTG 3' Usp30 mmu-miR-425 beg:722 end:738 pic:3' AGTTGCCCTCACTA-GCACAGTAA 5'& ||| .||||||| &5' ----------TGAGCTGTGTCAT- 3' Usp30 mcmv-miR-m107-1-5p beg:695 end:717 pic:3' CCACTGAGC--TCTG---CTCACTGGC 5'& || .||| ||||||.| &5' -------CGGAGGACCAGGAGTGATC- 3' Usp30 mcmv-miR-m21-1 beg:675 end:690 pic:3' GCCGAACTTGCACAGGGGATA 5'& || ||.||||.| &5' ---------CGAGTTCCCTGT 3' Usp30 mcmv-miR-M23-2 beg:85 end:105 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || || ||||.|| &5' --GCCCTCTAGA-GCCCTCA- 3' Usp30 mghv-miR-M1-6 beg:79 end:105 pic:3' TTTTGGT--GGAGTGTGTCAA-AGT 5'& ||.||| |||| .| || ||| &5' -AAGCCAGCCCTC-TAGAGCCCTCA 3' Usp30 mmu-let-7g beg:724 end:747 pic:3' TTGACAT-GTTTGATGATGGAGT 5'& |.||||. || ||.| ||||| &5' AGCTGTGTCAT-CTGC-ACCTC- 3' Usp30 mmu-miR-106bstar beg:512 end:532 pic:3' CGTCGTTCATGGG---TGTCACGCC 5'& |.||. ||||||.|| &5' --------TGCCTAAAACAGTGTGG 3' Usp30 mmu-miR-1186 beg:139 end:161 pic:3' GTACGGAAATTAAG-GTCGTGAG 5'& ||| ||||||| &5' ---GCCAGACCCACACAGCACT- 3' Usp30 mmu-miR-1186b beg:225 end:238 pic:3' CACCACGTACGGAAATTAGGGT 5'& || .|||||| &5' ---------GCA---GATCCCA 3' Usp30 mmu-miR-1186b beg:654 end:679 pic:3' CACCACGTACGGAA---ATTAGGGT 5'& ||| | | ||||| |||||.| &5' -TGG-GGACGCCTTTTGTAATCTC- 3' Usp30 mmu-miR-1193 beg:419 end:442 pic:3' CTATCATTTTGC--C-CACTGGAT 5'& ||.|.|| | |||||||. &5' ----GTGAGACCAAGCGTGACCTG 3' Usp30 mmu-miR-1198 beg:586 end:610 pic:3' GGTTCGGTCGG-TCCTTGTGTAT 5'& |.|.||||||| .|| | ||| &5' CTAGGCCAGCCTGGGCTC-CAT- 3' Usp30 mmu-miR-125a-3p beg:718 end:741 pic:3' CCGAGGGTTCTTGG---AGTGGACA 5'& ||.|| ||.|. |||.||| &5' --CTTCCT-GAGCTGTGTCATCTG- 3' Usp30 mmu-miR-128 beg:438 end:458 pic:3' TTTCTCTGGCCAAGTGACACT 5'& .|||| | .|||||| &5' -GAGAGTCACA---GCTGTGA 3' Usp30 mmu-miR-1-2-as beg:1094 end:1116 pic:3' ACCTTACATTTC-TTCATACAT 5'& .|||| ||||.|||| &5' ---GATGTTAGCTAAGTGTGTA 3' Usp30 mmu-miR-133a beg:696 end:708 pic:3' GTCGACCAACTTCC-CCTGGTTT 5'& || ||||||. &5' ------------GGAGGACCAG- 3' Usp30 mmu-miR-133b beg:416 end:431 pic:3' ATCGACCAACTTCCCCTGGTTT 5'& |||| | |||||| &5' ------GTTGT--GAGACCAA- 3' Usp30 mmu-miR-133b beg:696 end:708 pic:3' ATCGACCAACTTCC-CCTGGTTT 5'& || ||||||. &5' ------------GGAGGACCAG- 3' Usp30 mmu-miR-141star beg:151 end:182 pic:3' AGGTTGTGACG--------TGACCTTCTAC 5'& ||.|||||| ||||||||||| &5' --CAGCACTGCCAGGGTGAACTGGAAGATG 3' Usp30 mmu-miR-142-3p beg:140 end:163 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& ||| |.||||.| &5' -CCAGACCCACAC-AGCACTGC- 3' Usp30 mmu-miR-142-3p beg:561 end:585 pic:3' AGGTATTTCATCCTTT--GTGATGT 5'& |.|.| ||||. ||||.|| &5' ----TGAGGCAGGAGGATCACTGCA 3' Usp30 mmu-miR-145 beg:825 end:840 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& |||| |.||||. &5' -------CCTGAC--AGCTGGG- 3' Usp30 mmu-miR-145star beg:1054 end:1070 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |.|||| |||||.. &5' ---GGACAG-----CCAGGGG- 3' Usp30 mmu-miR-145star beg:694 end:713 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||.| ||||||.| &5' -----ACGGAGGA-CCAGGAGT 3' Usp30 mmu-miR-146a beg:263 end:279 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |.| || ||||||| &5' ---CTA-GGT-----GTTCTCA 3' Usp30 mmu-miR-146b beg:262 end:279 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& ||. || ||||||| &5' -GCTA--GGT-----GTTCTCA 3' Usp30 mmu-miR-148a beg:1073 end:1089 pic:3' TGTTTCAAGACATCA-CGTGACT 5'& ||. ||||||| &5' ----------GTGACGGCACTGA 3' Usp30 mmu-miR-148b beg:1073 end:1089 pic:3' TGTTTCAAGACACTA-CGTGACT 5'& |||| ||||||| &5' ----------GTGACGGCACTGA 3' Usp30 mmu-miR-151-3p beg:584 end:607 pic:3' GGAGTTCC--TCGGAGTC-AGATC 5'& .|| ||| ||||| .| || &5' -TTCTAGGCCAGCCTGGGCTC--- 3' Usp30 mmu-miR-151-3p beg:942 end:966 pic:3' GGAGTTCCTCGGA-------GTCAGATC 5'& ||||| ||||.|.| &5' ------GGAGCAAAATCCTGCAGTTTGG 3' Usp30 mmu-miR-151-3p beg:272 end:298 pic:3' GGAGT--TCC-TCGGAGTCAGATC 5'& |||| .|| |||||. |||| &5' -CTCAGAGGGCAGCCTTTGGCTAG 3' Usp30 mmu-miR-152 beg:1067 end:1089 pic:3' GGTTCAAGACAGTACGTGACT 5'& ..| || ||||||| &5' --GGGATCGTGACGGCACTGA 3' Usp30 mmu-miR-183 beg:716 end:738 pic:3' TCACTTAAGATGGT-----CACGGTAT 5'& ||| || |||.||| &5' -------TCTTCCTGAGCTGTGTCAT- 3' Usp30 mmu-miR-185 beg:1026 end:1045 pic:3' AGTCCTTGACGGAAA---GAGAGGT 5'& |||| ||.|||| &5' ---------GCCTCTCCCCTTTCCA 3' Usp30 mmu-miR-186star beg:955 end:975 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& ||. || .|.||||||| &5' --CAGT---TTGGCTTTAGGGC 3' Usp30 mmu-miR-1902 beg:725 end:748 pic:3' TTCAGTACGGATGACGTGGAGA 5'& .|| .||.| |||||||||| &5' GAGCTGTGTCATCTGCACCTCT 3' Usp30 mmu-miR-1929 beg:577 end:593 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||| ||||.||||. &5' --CTGC------AAGTTCTAGG- 3' Usp30 mmu-miR-1934 beg:555 end:580 pic:3' TCTCCTGCTTCGTCC-CCTGGTCT 5'& .||| .||.||||| |||.|| &5' GGAGACTGAGGCAGGAGGATCA-- 3' Usp30 mmu-miR-1938 beg:640 end:655 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& ||| ||||||| &5' ---------ACACCTCCCACC- 3' Usp30 mmu-miR-193star beg:139 end:152 pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||| ||||||| &5' -------GCC-----AGACCCA 3' Usp30 mmu-miR-1940 beg:457 end:482 pic:3' TTGACGAGG-TGGAAGAGTCAGGAGGTA 5'& .||| .|||| || |.|||| &5' -GCTGGGAAAGCCTTGTC---CTTCCA- 3' Usp30 mmu-miR-1941-5p beg:614 end:629 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||| .||||||. &5' ----------ACCT-TATCTCCT- 3' Usp30 mmu-miR-1948 beg:503 end:523 pic:3' GACATGCTCACGAG-----ACGGATTT 5'& |.|| |||||||| &5' ----------GTTCAAGAATGCCTAAA 3' Usp30 mmu-miR-1953 beg:878 end:897 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.| ||| .|||||.|| &5' --GGA-CCTT---GCTTTCTCA 3' Usp30 mmu-miR-1953 beg:397 end:417 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || |||| | ||||||| &5' -AGT-GCCTTTG---TTTCCCA 3' Usp30 mmu-miR-1956 beg:589 end:606 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& |.| ||| |||||.|| &5' ------GGC-CAG-CCTGGGCT 3' Usp30 mmu-miR-1956 beg:803 end:821 pic:3' AGGCGACTGAGTCG-GGACCTGA 5'& |.| ||| |||||.| &5' ------GGC-CAGAACCTGGGC- 3' Usp30 mmu-miR-1959 beg:591 end:611 pic:3' GAGGT--GACTCGATGTAGGGG 5'& ||| |||.||| |||| &5' --CCAGCCTGGGCTCCATC--- 3' Usp30 mmu-miR-1960 beg:1071 end:1088 pic:3' TCGGGAGAAG-ATTGTCGTGACC 5'& || |.||.|||||| &5' --------TCGTGACGGCACTG- 3' Usp30 mmu-miR-1960 beg:139 end:162 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |||| ||||||||| &5' AGCCAGACCCACACAGCACTG- 3' Usp30 mmu-miR-1968 beg:432 end:456 pic:3' TCAGGTGGTAGGAAT-TGTCGACGT 5'& . ||| |||||||. &5' ---TGACCTGAGAGTCACAGCTGT- 3' Usp30 mmu-miR-196a beg:545 end:566 pic:3' GGGTTGTTGTA-CTTTGATGGAT 5'& ||||.| ||.| ||.|||. &5' CCCAGC-ACGTGGAGACTG---- 3' Usp30 mmu-miR-196b beg:545 end:566 pic:3' GGGTTGTTGT-CCTTTGATGGAT 5'& ||||.| ||. |||.|||. &5' CCCAGC-ACGTGGAGACTG---- 3' Usp30 mmu-miR-1971 beg:271 end:293 pic:3' AGAGTCGG--GTCGGAAATG 5'& |||||| ||||||||. &5' TCTCAGAGGGCAGCCTTTG- 3' Usp30 mmu-miR-1971 beg:584 end:605 pic:3' AGAG-TCGGGTCGGAAATG 5'& .|| || ||||||| .| &5' -TTCTAGGCCAGCCTGGGC 3' Usp30 mmu-miR-1971 beg:1038 end:1054 pic:3' AGAGTCGGGTCGGAAATG 5'& || ||| |.||||| &5' TC-CAGACTAGCCT---- 3' Usp30 mmu-miR-1981 beg:396 end:409 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& |||. ||||||. &5' ---------AAGT---GCCTTTG- 3' Usp30 mmu-miR-1983 beg:152 end:171 pic:3' TCTTTTGT-ACGAGGTCCACTC 5'& |.|| ||| | .||||| &5' ----AGCACTGC-CAGGGTGA- 3' Usp30 mmu-miR-199a-5p beg:447 end:465 pic:3' CTTGTCCATCAGAC-TTGTGACCC 5'& || ||| .||.||||| &5' --------AG-CTGTGACGCTGGG 3' Usp30 mmu-miR-202-5p beg:836 end:848 pic:3' TTTCTTCATATACGTATCCTT 5'& | .|||||| &5' ------------GGGTAGGAA 3' Usp30 mmu-miR-203 beg:291 end:313 pic:3' GATCACCAGGATTTGTAAAGTG 5'& |||| ||| .||||||||| &5' CTAGCC--CCT-GACATTTCAC 3' Usp30 mmu-miR-2136 beg:885 end:909 pic:3' GTGT-AGAGTCAGTTGTGG-GTC 5'& .| |||||||||.| |. |.| &5' -GCTTTCTCAGTCAGC-CTACGG 3' Usp30 mmu-miR-2140 beg:725 end:745 pic:3' TGGTGGTTCTAGACGTGGA 5'& .| . |||||||||| &5' GCTGTGTC-ATCTGCACCT 3' Usp30 mmu-miR-214 beg:238 end:260 pic:3' TGACGGACAGACACGGACGACA 5'& ||| .||||||| &5' ---GCCACCTTTTCTCTGCTGT 3' Usp30 mmu-miR-2146 beg:130 end:153 pic:3' GTGTA-CCTTGGGAAGAGGTG 5'& |||| |||.|| | |||| &5' CACAAGGGAGCCAGAC-CCAC 3' Usp30 mmu-miR-220 beg:512 end:535 pic:3' TTCACAGAC--TGTGACACCACC 5'& || || ||| |||||||| &5' ---TGCCTAAAACAGTGTGGTGG 3' Usp30 mmu-miR-23a beg:509 end:533 pic:3' CCTTTAGGGACC--GTTACACTA 5'& .||| ||| ||.||||.| &5' --GAATGCCTAAAACAGTGTGGT 3' Usp30 mmu-miR-24 beg:1017 end:1032 pic:3' GACAAGGACGACTTGACTCGGT 5'& |. ||||.||| &5' --------GTAC-ACTGGGCC- 3' Usp30 mmu-miR-25 beg:1098 end:1118 pic:3' AGTCTGGCTCTGTTCACGTTAC 5'& |.|| | || |||.||| &5' TTAG-CTAAGT---GTGTAAT- 3' Usp30 mmu-miR-26bstar beg:111 end:128 pic:3' CTCGGTTCATTAC-CTCTTGTCC 5'& ||| ||||.|||| &5' -------GTATTCTGAGAGCAGG 3' Usp30 mmu-miR-28 beg:479 end:489 pic:3' GAGTTATCTGACACTCGAGGAA 5'& .|||||| &5' --------------GGCTCCT- 3' Usp30 mmu-miR-2861 beg:465 end:488 pic:3' GGCGG-GCGGC--GGTCCGGGG 5'& ||| .|.| ||||||.|| &5' --GCCTTGTCCTTCCAGGCTCC 3' Usp30 mmu-miR-296-3p beg:92 end:111 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& |||||| |.||.||.|| &5' --AGAGCC----CTCAGCCTTC 3' Usp30 mmu-miR-298 beg:235 end:258 pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& |||| || |..|.||||||. &5' --GAAGC-CACCTTTTCTCTGCT 3' Usp30 mmu-miR-29bstar beg:72 end:90 pic:3' ATTTGGTGGTATAC-TTTGGTCG 5'& ||| .|| ||.||||| &5' -----CAC---GTGCAAGCCAGC 3' Usp30 mmu-miR-30a beg:786 end:806 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& ||| ||| ||||||| &5' ---CCA--CGACAGGGTTTACA 3' Usp30 mmu-miR-30c-2star beg:612 end:633 pic:3' TCTCATTTGTC--GGAAGAGGGTC 5'& |||| .|| |||||| &5' -----AAACCTTATCTCCTCCCA- 3' Usp30 mmu-miR-30estar beg:551 end:568 pic:3' CGACATTTGTAGG-CTGACTTTC 5'& ||.| ||||||.. &5' -------ACGTGGAGACTGAGG- 3' Usp30 mmu-miR-32 beg:1097 end:1118 pic:3' AC-GTTGAATCATTACACGTTAT 5'& || .|.|| |.||||.||| &5' TGTTAGCTA---AGTGTGTAAT- 3' Usp30 mmu-miR-326 beg:478 end:495 pic:3' TGACCTCCTTCCC--GGGTCTCC 5'& ||| |.|||||| &5' ---------AGGCTCCTCAGAGG 3' Usp30 mmu-miR-326 beg:262 end:281 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& .|| ||| | |.|||||| &5' GCT--AGGT-GTTCTCAGAGG 3' Usp30 mmu-miR-327 beg:622 end:643 pic:3' TAGGAGTACGG-GGAGTTCA 5'& ||||| ||||||| &5' -TCCTCCCAAAGCCTCAAG- 3' Usp30 mmu-miR-331-5p beg:1082 end:1098 pic:3' CCTAGGGACCCTGGTATGGATC 5'& ||| |.||||||| &5' ------CTGA---CGTACCTAG 3' Usp30 mmu-miR-339-5p beg:778 end:800 pic:3' GCACTCGA-GGACCTCCTGTCCCT 5'& || ||.| || ||||||| &5' -GT-AGTTGCCCAC--GACAGGG- 3' Usp30 mmu-miR-3473 beg:862 end:881 pic:3' CCGACTCGGTAGAGAGGT 5'& || || || .||||||. &5' GGGTG-GCAGTCTCTCT- 3' Usp30 mmu-miR-3473 beg:235 end:255 pic:3' CCGAC-TCGGT---AGAGAGGT 5'& | ||||| |.||||. &5' ----GAAGCCACCTTTTCTCT- 3' Usp30 mmu-miR-34a beg:143 end:165 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||| .|||||||| &5' --GACCCACACA-GCACTGCCA 3' Usp30 mmu-miR-367 beg:1101 end:1119 pic:3' AGTGGTAACGATTT-CACGTTAA 5'& |||||. |||.|||| &5' --------GCTAAGTGTGTAATT 3' Usp30 mmu-miR-375 beg:931 end:952 pic:3' AGTGCGCTCGGCTTG--CTTGTTT 5'& |||| ||| ||.|||| &5' ------GAGCAGAAGTGGAGCAAA 3' Usp30 mmu-miR-376c beg:104 end:116 pic:3' TGCACTTTAAAGGAGATACAA 5'& |.|||.||| &5' -----------CTTCTGTGT- 3' Usp30 mmu-miR-383 beg:730 end:752 pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |.||. |||| ||||||| &5' -GTCATCTGCACC-TCTGATC- 3' Usp30 mmu-miR-431 beg:632 end:646 pic:3' ACGTACTGCCGGACGTTCTGT 5'& |||| ||||||| &5' ---------GCCT-CAAGACA 3' Usp30 mmu-miR-449a beg:141 end:165 pic:3' TGGTC-GATTGTTATGTGACGGT 5'& .|||| | ||| .|||||||| &5' GCCAGACCCACACAGCACTGCCA 3' Usp30 mmu-miR-449b beg:24 end:45 pic:3' CGGTCGATT--GTTGTGACGGA 5'& .|. | ||||||.| &5' ---GGTGAGGTCCACACTGTC- 3' Usp30 mmu-miR-449b beg:140 end:164 pic:3' CGGTCGAT---TGTTGTGACGGA 5'& ||||| |||.||||||| &5' GCCAGACCCACACAGCACTGCC- 3' Usp30 mmu-miR-449c beg:140 end:164 pic:3' GGTCGATC-GTTACGTGACGGA 5'& |||| || |||||||| &5' CCAGACCCACACAGCACTGCC- 3' Usp30 mmu-miR-450b-5p beg:566 end:587 pic:3' ATAAGTCCTTGTA-TGACGTTTT 5'& |||||. || |||||||. &5' ----CAGGAGGATCACTGCAAG- 3' Usp30 mmu-miR-469 beg:325 end:341 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& |.||| ||.||||| &5' -----------TTAAT-AAGGAGGC- 3' Usp30 mmu-miR-470 beg:29 end:50 pic:3' TGAGTGGTCACGGT----CAGGTTCTT 5'& .|| ||| |||||.|| &5' -------GGT-CCACACTGTCCAGGA- 3' Usp30 mmu-miR-470 beg:497 end:515 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || .|||.|||||| &5' -------AGAA-TAGTTCAAGAA 3' Usp30 mmu-miR-485 beg:89 end:110 pic:3' CTTAAGTAG-TGCCGGTCGGAGA 5'& || .| .||||||. &5' ----TCTAGAGCCCTCAGCCTT- 3' Usp30 mmu-miR-485star beg:984 end:997 pic:3' CTCTCCTCTCGGCACATACTGA 5'& ||||.||||| &5' ------------GTGTGTGACT 3' Usp30 mmu-miR-504 beg:778 end:803 pic:3' CTATC-TC-ACGTCTG--GTCCCAGA 5'& ||| || ||| ||||||.| &5' --TAGTAGTTGCCCACGACAGGGTTT 3' Usp30 mmu-miR-509-5p beg:822 end:844 pic:3' TACTAACGGTGTAA-GACCTCAT 5'& |.| || ||||.||| &5' --GGTGACCTGACAGCTGGGGTA 3' Usp30 mmu-miR-511 beg:362 end:384 pic:3' ACTCACGTCTCGT-TTTCCGTA 5'& |||| ||||||| &5' --AGTGAAATTATTAAAGGCA- 3' Usp30 mmu-miR-532-5p beg:44 end:66 pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& || .| |||||||| &5' --GGATAAAAGCA-AAGGCATG 3' Usp30 mmu-miR-540-3p beg:733 end:752 pic:3' GGTCCTAG-C-TGGAGACTGGA 5'& ||| | ||||||||.| &5' -----ATCTGCACCTCTGATC- 3' Usp30 mmu-miR-542-5p beg:288 end:305 pic:3' AGCACTGTACTACTAGGGGCTC 5'& ||.| |||.|| &5' ---TGGCTAGC----CCCTGA- 3' Usp30 mmu-miR-667 beg:252 end:275 pic:3' GAACCCGACCCAC--CG-TCCACAGT 5'& |||| || ||||||. &5' -----GCTGTAATATGCTAGGTGTT- 3' Usp30 mmu-miR-668 beg:850 end:873 pic:3' CCATCACCCGGCTC--GG-CTCACTGT 5'& |||| || |.|||.|| &5' -------GGCCCTAACCCAGGGTGGCA 3' Usp30 mmu-miR-669e beg:632 end:646 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& || | ||||||| &5' --------GC-CT--CAAGACA 3' Usp30 mmu-miR-671-5p beg:82 end:103 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& |||| |||||.|| || ||| &5' --CCAG-CCCTCTAGAGC--CCT 3' Usp30 mmu-miR-672 beg:1040 end:1056 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& ||| ||.|.||||| &5' -------CAG---ACTAGCCTCA 3' Usp30 mmu-miR-673-5p beg:436 end:458 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& | || .|| |||||||| &5' --CTGAGAGTCACAGCTGTGA- 3' Usp30 mmu-miR-675-5p beg:725 end:745 pic:3' TGACACCCGGGAAAGGCGTGGT 5'& .|||| |.| ||.||||| &5' GCTGT--GTCA--TCTGCACC- 3' Usp30 mmu-miR-679 beg:425 end:448 pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& |||||| || |||| | |||| &5' ACCAAGCGTGACCTGAGAGTC- 3' Usp30 mmu-miR-681 beg:582 end:606 pic:3' TCGACGGA-CGGTCGC-TCCGAC 5'& ||.| |. |||||| .|||| &5' AGTT-CTAGGCCAGCCTGGGCT- 3' Usp30 mmu-miR-682 beg:563 end:585 pic:3' GTCTGAAGTGACACTGACGTC 5'& ||.| |||||| &5' -AGGCAGGAGGATCACTGCA- 3' Usp30 mmu-miR-684 beg:452 end:468 pic:3' AACTGAACTTCCCTTTTGA 5'& |||| ||||||.| &5' -TGACGCT--GGGAAAGC- 3' Usp30 mmu-miR-686 beg:995 end:1017 pic:3' AGAAGTGGCAGACCC-TTCGTTA 5'& |||. ||.| |||||| &5' ---TCATGGTTTCAATAAGCAA- 3' Usp30 mmu-miR-686 beg:199 end:220 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& |.||| ||.||||| &5' ---TTACCTGACA-GAGGCAAT 3' Usp30 mmu-miR-686 beg:902 end:924 pic:3' AGAAGTGGCAGAC---CCTTCGTTA 5'& .|| || |||||||. &5' ----TACGGTAAGGACGGAAGCAG- 3' Usp30 mmu-miR-696 beg:145 end:163 pic:3' GGGTGTCGTTCGTGTGCG 5'& |||||| | ||||| .|| &5' CCCACA-C-AGCAC-TGC 3' Usp30 mmu-miR-705 beg:632 end:655 pic:3' ACGG-GTGGGGTGGAGGGTGG 5'& ||| || ||||||||||| &5' -GCCTCAAGACACCTCCCACC 3' Usp30 mmu-miR-705 beg:139 end:164 pic:3' ACGGG-TGGG-GTGGAG-GGTGG 5'& ||| |||| ||| | | || &5' -GCCAGACCCACACAGCACTGCC 3' Usp30 mmu-miR-709 beg:873 end:894 pic:3' AGGAG-GAC--GGAGACGGAGG 5'& .||| ||| ||| |||.|.| &5' -TCTCTCTGGACCT-TGCTTTC 3' Usp30 mmu-miR-713 beg:181 end:199 pic:3' CGACACACGGAAGTCACGT 5'& |||||||.|| || || &5' -CTGTGTGTCT--AGAGC- 3' Usp30 mmu-miR-742 beg:949 end:970 pic:3' AAATGGGTCGTACCACCGAAAG 5'& |.|| ||| ||||||| &5' ---ATCCTGCAGTTTGGCTTT- 3' Usp30 mmu-miR-744 beg:939 end:960 pic:3' ACGACAA-TCGGGATCGGGGCGT 5'& || ||| .||.||| &5' ----GTGGAGCAAAA-TCCTGCA 3' Usp30 mmu-miR-744star beg:904 end:926 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| ||| .| |||.|| &5' -GGTA-AGGACGGAAGCAGCA- 3' Usp30 mmu-miR-758 beg:431 end:452 pic:3' ATCACCTGG--TC-CAGTGTTT 5'& || |||| || ||||||. &5' --GT-GACCTGAGAGTCACAG- 3' Usp30 mmu-miR-760 beg:86 end:108 pic:3' AGGGGTGTCT-GGGTCTCGGC 5'& |||. .||| ||| |||| &5' -CCCTCTAGAGCCCTCAGCC- 3' Usp30 mmu-miR-761 beg:238 end:260 pic:3' ACACAGTCAAAGTGGGACGACG 5'& | || ||. |.||||||. &5' ---GCCACCTTTTCTCTGCTGT 3' Usp30 mmu-miR-767 beg:583 end:605 pic:3' ACGAG-TCT-GTTGGTACCACGT 5'& |.|| ||. ||.|| ||| || &5' -GTTCTAGGCCAGCC-TGG-GC- 3' Usp30 mmu-miR-770-3p beg:2 end:28 pic:3' GGTCGAGGTG-CAG-TCCGGGTGC 5'& ||||| ||| | .||||||.| &5' CCAGC-CCAGAGCCAGGGCCCATG 3' Usp30 mmu-miR-872star beg:488 end:511 pic:3' TCCTCCGATGACGTTATCAAGT 5'& ||||| ||||||||| &5' --GAGGCCAAAAGAATAGTTCA 3' Usp30 mmu-miR-877 beg:238 end:257 pic:3' GGGACGCGGT--AGAGGAGATG 5'& |||| |.|.||||.| &5' ------GCCACCTTTTCTCTGC 3' Usp30 mmu-miR-877star beg:555 end:578 pic:3' AC-CCTC---CTCCCTCTTCTCCTGT 5'& | |||| |||| |.|||||. &5' -GTGGAGACTGAGGC--AGGAGGAT- 3' Usp30 mmu-miR-877star beg:696 end:706 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& .|||||| &5' --------------GGAGGAC- 3' Usp30 mmu-miR-879 beg:453 end:473 pic:3' CCGAATCT-CGATA--TTCGGAGA 5'& || |||. ||||||. &5' ------GACGCTGGGAAAGCCTT- 3' Usp30 mmu-miR-881star beg:864 end:882 pic:3' TCTACACTGACAATAGAGAGAC 5'& |||.| .|||||||| &5' ----GTGGCA---GTCTCTCTG 3' Usp30 mmu-miR-883a-3p beg:942 end:963 pic:3' TATGACTCTCGACA----ACGTCAAT 5'& .|||| ||||||| &5' ------GGAGCAAAATCCTGCAGTT- 3' Usp30 mmu-miR-883b-5p beg:879 end:898 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||| .|.|. |||||||| &5' -GACC-TTGCT--TTCTCAGT- 3' Usp30 mmu-miR-92astar beg:641 end:656 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& |||| .||||||| &5' -------CACC---TCCCACCT 3' Usp30 mmu-miR-325 beg:999 end:1013 pic:3' AACTATCCTCCACGAGTTATTT 5'& ||| .|||||||. &5' ---------GGT-TTCAATAAG 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp30 RAID00002358 mmu-miR-449a-3p miRNA MIMAT0017180 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00148079 mmu-miR-290a-5p miRNA MIMAT0000366 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00150802 mmu-miR-6946-3p miRNA MIMAT0027793 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00174801 mmu-miR-34b-5p miRNA MIMAT0000382 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID00344813 mmu-miR-466i-3p miRNA MIMAT0005834 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00353223 mmu-miR-7679-5p miRNA MIMAT0029872 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00356234 mmu-miR-7018-3p miRNA MIMAT0027941 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00561451 mmu-miR-9-5p miRNA MIMAT0000142 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00594933 mmu-miR-330-5p miRNA MIMAT0004642 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00607804 mmu-miR-1982-5p miRNA MIMAT0009459 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00635384 mmu-miR-34a-5p miRNA MIMAT0000542 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID00654224 mmu-miR-7068-3p miRNA MIMAT0028043 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00800364 mmu-miR-339-5p miRNA MIMAT0000584 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00801432 mmu-miR-203-3p miRNA MIMAT0000236 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00831946 mmu-miR-879-5p miRNA MIMAT0004842 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID00843073 mmu-miR-34c-5p miRNA MIMAT0000381 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID00857224 mmu-miR-328-3p miRNA MIMAT0000565 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID00945984 mmu-miR-7068-5p miRNA MIMAT0028042 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01009937 mmu-miR-7023-3p miRNA MIMAT0027951 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01371053 mmu-miR-326-3p miRNA MIMAT0000559 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01424287 mmu-miR-6930-3p miRNA MIMAT0027761 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01435492 mmu-miR-18b-5p miRNA MIMAT0004858 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01456613 mmu-miR-6337 miRNA MIMAT0025080 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01476282 mmu-miR-208b-3p miRNA MIMAT0004939 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01513321 mmu-miR-7229-3p miRNA MIMAT0028427 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01584331 mmu-miR-449c-5p miRNA MIMAT0003460 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID01643580 mmu-miR-199a-5p miRNA MIMAT0000229 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID01725021 mmu-miR-7664-3p miRNA MIMAT0029835 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01843797 mmu-miR-7037-5p miRNA MIMAT0027978 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01898006 mmu-miR-378d miRNA MIMAT0025167 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID01944587 mmu-miR-6918-3p miRNA MIMAT0027737 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02055797 mmu-miR-511-5p miRNA MIMAT0004940 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02259238 mmu-miR-489-3p miRNA MIMAT0003112 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02275714 mmu-miR-7084-3p miRNA MIMAT0028075 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02288736 mmu-miR-199b-5p miRNA MIMAT0000672 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02443403 mmu-miR-6964-3p miRNA MIMAT0027829 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02521140 mmu-miR-6395 miRNA MIMAT0025146 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02583217 mmu-miR-124-3p miRNA MIMAT0000134 Usp30 mRNA 100756 Prediction 0.2381 Usp30 RAID02617756 mmu-miR-7013-3p miRNA MIMAT0027931 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02877371 mmu-miR-5108 miRNA MIMAT0020616 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02884860 mmu-miR-744-3p miRNA MIMAT0004820 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02916157 mmu-miR-6969-5p miRNA MIMAT0027840 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID02927003 mmu-miR-449a-5p miRNA MIMAT0001542 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID02941766 mmu-miR-449b miRNA MIMAT0005447 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID03021709 mmu-miR-425-5p miRNA MIMAT0004750 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03061739 mmu-miR-149-5p miRNA MIMAT0000159 Usp30 mRNA 100756 Prediction 0.2202 Usp30 RAID03393260 mmu-miR-222-3p miRNA MIMAT0000670 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03405550 mmu-miR-329-3p miRNA MIMAT0000567 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03592156 mmu-miR-7a-5p miRNA MIMAT0000677 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03678624 mmu-miR-377-3p miRNA MIMAT0000741 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03750235 mmu-miR-7083-3p miRNA MIMAT0028073 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03986475 mmu-miR-208a-3p miRNA MIMAT0000520 Usp30 mRNA 100756 Prediction 0.1828 Usp30 RAID03992454 mmu-miR-362-3p miRNA MIMAT0004684 Usp30 mRNA 100756 Prediction 0.1828