DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000143 mmu-miR-9* 14357 Dtx1 ugaaagccaauaGAUCGAAAUa | ||||||| auggaagucagcCAAGCUUUAa 2 11 938 959 [mm9:5:121130298-121130319:-] 0.6259 142 7 -9.77 -0.6295 MIMAT0004575 mmu-miR-295* 14357 Dtx1 cuucacaCGGGG--UGUAAACUCa ||:|| ||||||||| cuaaaccGCUCCGGACAUUUGAGa 2 16 722 745 [mm9:5:121130512-121130535:-] 0.5929 158 7 -19.19 -0.2846 MIMAT0004583 mmu-miR-130b* 14357 Dtx1 ucaucacguugUCCCUUUCUCa :| ||||||| ucccagcuuggGGAGAAAGAGa 2 12 310 331 [mm9:5:121130926-121130947:-] 0.5383 143 7 -15.24 -0.2412 MIMAT0004616 mmu-miR-30c-1* 14357 Dtx1 ccucauuuguugGGAGAGGGUc |:||||||| cgugccucuccaCUUCUCCCAg 2 11 294 315 [mm9:5:121130942-121130963:-] 0.5383 146 7 -20.81 -0.3243 MIMAT0005438 mmu-miR-30c-2* 14357 Dtx1 ucucauuugucgGAAGAGGGUc ||||||||| cgugccucuccaCUUCUCCCAg 2 11 294 315 [mm9:5:121130942-121130963:-] 0.5383 150 7 -21.50 -0.3243 MIMAT0004620 mmu-let-7a* 14357 Dtx1 ccuuucuGUCAUCUA-ACAUAUc || || || |||||| gugucucCAUUACAUCUGUAUAg 2 16 369 391 [mm9:5:121130866-121130888:-] 0.5383 123 6 -7.30 -0.2894 MIMAT0005439 mmu-let-7c-2* 14357 Dtx1 ccuuucuGUCAUCUA-ACAUAUc || || || |||||| gugucucCAUUACAUCUGUAUAg 2 16 369 391 [mm9:5:121130866-121130888:-] 0.5383 123 6 -7.30 -0.2894 MIMAT0004623 mmu-let-7f* 14357 Dtx1 cccuuccGUUAUCUA-ACAUAUc || || || |||||| gugucucCAUUACAUCUGUAUAg 2 16 369 391 [mm9:5:121130866-121130888:-] 0.5383 123 6 -7.48 -0.2894 MIMAT0004638 mmu-miR-323-5p 14357 Dtx1 cgCUUG-CG-CGGUG-CCUGGUGGa ||:| || | |: |||||||| aaGAGCAGCAGAGAUAGGACCACCa 2 21 166 190 [mm9:5:121131067-121131091:-] 0.5273 149 7 -24.14 -0.4354 MIMAT0000569 mmu-miR-330* 14357 Dtx1 agAGACGUCCGGGACACGAA-ACg ||| | |::||||||| || uaUCUUAA--CUUUGUGCUUGUGu 2 22 592 613 [mm9:5:121130644-121130665:-] 0.5465 122 0 -15.32 -0.6843 MIMAT0004664 mmu-miR-214* 14357 Dtx1 cgUGU-CGUUCACAUCUG-UCCGu :|| || | || :||| |||| ucGCAGGCCACUGGGGACGAGGCu 2 21 569 592 [mm9:5:121130665-121130688:-] 0.5390 123 0 -18.36 -0.1856 MIMAT0004668 mmu-miR-138* 14357 Dtx1 ggGACCACAACACUUCA-UCGGc |||| | || ||||| |||| ugCUGG-GAUG-GAAGUCAGCCa 2 21 931 951 [mm9:5:121130306-121130326:-] 0.6259 128 0 -20.92 -0.4243 MIMAT0004758 mmu-miR-463 14357 Dtx1 gaUGGAAUAU-ACCACAGAUAGu ||:||:|: | ||||||||| uaACUUUGUGCUUGUGUCUAUCu 2 21 597 619 [mm9:5:121130638-121130660:-] 0.5405 171 7 -21.03 -0.6608 MIMAT0004758 mmu-miR-463 14357 Dtx1 gauGGAAUAUACCACAGAUAGu :|||: |||||||| aucUCUUGACCUCUGUCUAUCc 2 20 656 677 [mm9:5:121130580-121130601:-] 0.5345 147 7 -13.20 -0.2061 MIMAT0003167 mmu-miR-540-3p 14357 Dtx1 gguCCUAGCUGGAG-ACUGGa | :|| |:||| ||||| ccuGUGUCCAUCUCUUGACCu 2 18 647 667 [mm9:5:121130590-121130610:-] 0.5345 125 0 -20.42 -0.3646 MIMAT0003731 mmu-miR-671-5p 14357 Dtx1 gaGGUCGGGG-AGGUC-CCGAAGGa |::||:|| || | ||||||| agCUGGCUCCAACCUGUGGCUUCCg 2 22 139 163 [mm9:5:121131094-121131118:-] 0.5273 159 7 -29.46 -0.1095 MIMAT0003737 mmu-miR-666-5p 14357 Dtx1 ccgagagugucgacACGGGCGa ||||||| -----ggccugaguUGCCCGCc 2 9 1 17 [mm9:5:121131240-121131256:-] 0.4702 140 7 -18.91 -0.2358 MIMAT0003458 mmu-miR-681 14357 Dtx1 ucgacgGACGGUCGCUCCGAc ||| : ||||||| aggccaCUGGGGACGAGGCUa 2 16 573 593 [mm9:5:121130664-121130684:-] 0.5390 147 7 -18.99 -0.5439 MIMAT0003459 mmu-miR-682 14357 Dtx1 gucugaaGUGACAC-UGACGUc ||||| | |||||| accugccCACUGAGCACUGCAa 2 15 508 529 [mm9:5:121130728-121130749:-] 0.5348 126 6 -15.70 -0.1524 MIMAT0003462 mmu-miR-684 14357 Dtx1 aaCUGAA--CUUCCCUUUUGa ||||| | ||||||| gcGACUUCCCUAUGGAAAACg 2 18 197 217 [mm9:5:121131040-121131060:-] 0.5273 148 7 -11.59 -0.2825 MIMAT0003476 mmu-miR-669b 14357 Dtx1 uguACGUGUACGUGUGU-UUUGa | |||| |||||| |||| cccUUCACA-CCACACACAAACg 2 20 229 250 [mm9:5:121131007-121131028:-] 0.5273 129 0 -14.57 -0.2223 MIMAT0003483 mmu-miR-696 14357 Dtx1 ggGUGUCGUU-CGUGUGCg |||| || ||||||| caCACACAAACGCACACGu 2 17 239 257 [mm9:5:121131000-121131018:-] 0.5328 155 7 -19.57 -0.1392 MIMAT0003485 mmu-miR-455* 14357 Dtx1 gcuACAUCAGGUUUCCGUGUAu | ||| |: ||||||| gccUCUAGCCU---GGCACAUg 2 20 32 50 [mm9:5:121131207-121131225:-] 0.5218 143 7 -16.06 -0.1029 MIMAT0003494 mmu-miR-704 14357 Dtx1 gaUCCUCGUCUCGUGUACAGa ||| | | ||||||| aaAGGCCCCCAUGACAUGUCc 2 20 335 355 [mm9:5:121130902-121130922:-] 0.5383 147 7 -12.02 -0.1706 MIMAT0003511 mmu-miR-450b-5p 14357 Dtx1 auaagucCUUGUAUGACGUUUu ||:| |||||||| gcccacuGAGC--ACUGCAAAg 2 16 512 531 [mm9:5:121130726-121130745:-] 0.5314 148 7 -13.93 -0.1179 MIMAT0004930 mmu-miR-466d-5p 14357 Dtx1 guacauguacaUGCGUGUGUGu || ||||||| uugcccuucacAC-CACACACa 2 12 226 246 [mm9:5:121131011-121131031:-] 0.5273 141 7 -15.40 -0.3535 MIMAT0005843 mmu-miR-1188 14357 Dtx1 agGACCGGGUUGGAGUGUGGu :| ||| |:||||||| gcUUUGCC---CUUCACACCa 2 20 223 240 [mm9:5:121131017-121131034:-] 0.5273 147 7 -24.44 -0.5828 MIMAT0005845 mmu-miR-466k 14357 Dtx1 aguguacauguacauGUGUGUGu ||||||| cuuugcccuucacacCACACACa 2 9 224 246 [mm9:5:121131011-121131033:-] 0.5273 140 7 -15.91 -0.3701 MIMAT0005858 mmu-miR-1197 14357 Dtx1 ucuucaucugGUACACAGGAu || ||||||| cacaaacgcaCACGUGUCCUg 2 12 243 263 [mm9:5:121130994-121131014:-] 0.5328 147 7 -14.97 -0.1227 MIMAT0007870 mmu-miR-1900 14357 Dtx1 acUUCCUGGUCUCUCCCGCCGg || | : :| ||||||| ugAAAGUGGGCGGUGGGCGGCu 2 21 842 863 [mm9:5:121130394-121130415:-] 0.6259 144 7 -26.35 -0.2492 MIMAT0007875 mmu-miR-1898 14357 Dtx1 cuAGGGGACACUU--GGAACUGGa |||: ||| | :||||||| cuUCCUGUGUCCAUCUCUUGACCu 2 21 644 667 [mm9:5:121130590-121130613:-] 0.5345 155 7 -26.03 -0.4880 MIMAT0007877 mmu-miR-1894-5p 14357 Dtx1 ucuccguccaCCAUCCCCUCUc | | ||||||| acuucucccaGCUUGGGGAGAa 2 13 305 326 [mm9:5:121130931-121130952:-] 0.5383 144 7 -15.07 -0.5111 MIMAT0009395 mmu-miR-1932 14357 Dtx1 ggcUGGAUCGCGACAGG-CGUUg ||||: ||| ||| |||| ccaACCUGUGGCU-UCCGGCAAg 2 20 147 168 [mm9:5:121131089-121131110:-] 0.5273 125 0 -19.53 -0.1084 MIMAT0009396 mmu-miR-1933-5p 14357 Dtx1 uuugauUCUGGCUUGUGGUACUGa ||| |: | ||||||| agagacAGAAAGGCCCCCAUGACa 2 19 327 350 [mm9:5:121130907-121130930:-] 0.5383 154 7 -18.72 -0.3604 MIMAT0009407 mmu-miR-1942 14357 Dtx1 guuggucuacuucUGUAGACu ||||||| cugugucuccauuACAUCUGu 2 9 367 387 [mm9:5:121130870-121130890:-] 0.5383 140 7 -11.66 -0.6819 MIMAT0009412 mmu-miR-1946a 14357 Dtx1 uuuucacacacgguGGUGACGGG-CCGa ||::||||| ||| ggccaaccagaggcCCGUUGCCCAGGCa 2 14 874 901 [mm9:5:121130356-121130383:-] 0.6259 121 0 -26.85 -0.1523 MIMAT0009413 mmu-miR-1947 14357 Dtx1 gucGUG-AGUCG-AU-CGAGCAGGa :|| || |: || |||||||| cauUACAUCUGUAUAGGCUCGUCCc 2 20 376 400 [mm9:5:121130857-121130881:-] 0.5383 152 7 -20.59 -0.2155 MIMAT0009424 mmu-miR-1953 14357 Dtx1 gucuuCGGACUC---UUGAAAGGGu ||:|| | | ||||||| uuuguGCUUGUGUCUAUCUUUCCCg 2 18 601 625 [mm9:5:121130632-121130656:-] 0.5405 148 7 -18.86 -0.4307 MIMAT0009424 mmu-miR-1953 14357 Dtx1 gucuUCGGACUCUUGAAAGGGu || || : ||||||| guauAGGCUCGUCCCUUUCCCa 2 19 386 407 [mm9:5:121130850-121130871:-] 0.5383 146 7 -17.72 -0.2493 MIMAT0009424 mmu-miR-1953 14357 Dtx1 gucUUCGGACUCUUGAA-AGGGu |||| | | ||||| |||| gcaAAGCGUUA-AACUUCUCCCu 2 20 817 838 [mm9:5:121130419-121130440:-] 0.6259 129 0 -14.31 -0.1512 MIMAT0009428 mmu-miR-1956 14357 Dtx1 agGCGACUGAG-UCGGGACC-UGa | :|| ||| || ||||| || ugCCUUGCCUCUAG-CCUGGCACa 2 21 26 48 [mm9:5:121131209-121131231:-] 0.5218 121 0 -20.03 -0.1067 MIMAT0009436 mmu-miR-1963 14357 Dtx1 cuuccGGAGUACUAGAGCAGGGu |: :|| : |||||||| uacauCUGUAUAGGCUCGUCCCu 2 19 379 401 [mm9:5:121130856-121130878:-] 0.5383 154 7 -19.75 -0.2352 MIMAT0009442 mmu-miR-1969 14357 Dtx1 ugGGUACAAUUUCAGAGGUAGAa :| | || || ||||||| cuUCUUCUUCCUGUGUCCAUCUc 2 22 638 660 [mm9:5:121130597-121130619:-] 0.5345 153 7 -13.55 -0.2458 MIMAT0015646 mmu-miR-3474 14357 Dtx1 cuuagGUGCAGAG-GAGGGUCCc | |||| | :||||||| auaggCUCGUCCCUUUCCCAGGa 2 18 388 410 [mm9:5:121130847-121130869:-] 0.5383 156 7 -23.69 -0.6175 MIMAT0015646 mmu-miR-3474 14357 Dtx1 cuUAGGUGCAGAGGAGGGUCCc | |: :|||| ||||||| ugACCUCUGUCU-AUCCCAGGc 2 21 662 682 [mm9:5:121130575-121130595:-] 0.5345 154 7 -24.72 -0.2698 MIMAT0000150 mmu-miR-138 14357 Dtx1 gccgGACUAAGUGUU-GUGGUCGa | || :| :| ||||||| gcagCAGAGAUAGGACCACCAGCa 2 20 170 193 [mm9:5:121131064-121131087:-] 0.5273 146 7 -16.24 -0.3758 MIMAT0000150 mmu-miR-138 14357 Dtx1 gcCGGACUAAGUGUUGUGGUCGa ||| | || ||||||| uuGCC-CAGGCAACUCACCAGCu 2 22 891 912 [mm9:5:121130345-121130366:-] 0.6259 143 7 -20.42 -0.2183 MIMAT0000212 mmu-miR-183 14357 Dtx1 ucacuuAAGAUGGUCAC-GGUAu |||| || ||| |||| uucuucUUCUUCCUGUGUCCAUc 2 17 636 658 [mm9:5:121130599-121130621:-] 0.5345 128 0 -13.81 -0.4141 MIMAT0000237 mmu-miR-204 14357 Dtx1 uccguauccuacuGUUUCCCUu :||||||| gucagccaagcuuUAAAGGGAc 2 10 944 965 [mm9:5:121130292-121130313:-] 0.6259 141 7 -11.81 -0.2980 MIMAT0000538 mmu-miR-31 14357 Dtx1 guCGAUACGGUCGUA-GAACGGa || | | || |:| |||||| agGCAAAGACAUCGUCCUUGCCu 2 21 679 701 [mm9:5:121130556-121130578:-] 0.5345 128 6 -16.89 -0.1410 MIMAT0000658 mmu-miR-210 14357 Dtx1 agucGGCGACAGUGUGCGUGUc || | || ||||||| cacaCCACACACAAACGCACAc 2 19 234 255 [mm9:5:121131002-121131023:-] 0.5328 150 7 -15.81 -0.3067 MIMAT0000668 mmu-miR-211 14357 Dtx1 ucCGUUUCCUACUGUUUCCCUu || ||| | :||||||| caGCCAAGCUU--UAAAGGGAc 2 21 946 965 [mm9:5:121130292-121130311:-] 0.6259 149 7 -13.02 -0.2955 MIMAT0004750 mmu-miR-425 14357 Dtx1 aguugcccuCACUAGCACAG-UAa ||| |:||||| || cuuaacuuuGUGCUUGUGUCUAUc 2 15 595 618 [mm9:5:121130639-121130662:-] 0.5405 122 0 -14.50 -0.3893 MIMAT0003780 mmu-miR-490 14357 Dtx1 guCGUACCUCAGGAGGUCCAAc | :| || || ||||||| ugGGGUAGAAACC-CCAGGUUa 2 21 536 556 [mm9:5:121130701-121130721:-] 0.5314 150 7 -19.99 -0.4227

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G063158 Dtx1 Mus musculus 14357 19536157 0 0 R51829; MOUSE$DTX1_01; Binding factors: mmu-miR-138-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Dtx1 mmu-miR-204 beg:954 end:965 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& .||||||| &5' -------------TAAAGGGA- 3' Dtx1 mmu-miR-211 beg:954 end:965 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& .||||||| &5' -------------TAAAGGGA- 3' Dtx1 mmu-miR-804 beg:892 end:908 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& ||||| |||||||| &5' -CCAGG-------CAACTCAC- 3' Dtx1 mmu-miR-669n beg:231 end:249 pic:3' TGTGTGTAGGTGTGTGTTTA 5'& |||| ||||||||||| &5' ---CACA-CCACACACAAA- 3' Dtx1 mmu-miR-1960 beg:509 end:527 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |||| || ||||||| &5' -GCCCACTG-----AGCACTG- 3' Dtx1 mmu-miR-295star beg:726 end:745 pic:3' CTTCACACGGGG--TGTAAACTCA 5'& ||.|| ||||||||| &5' -------GCTCCGGACATTTGAG- 3' Dtx1 mmu-miR-466d-5p beg:234 end:247 pic:3' GTACATGTACATGCGTGTGTGT 5'& || |||||||| &5' -----------AC-CACACACA 3' Dtx1 mmu-miR-138 beg:895 end:913 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||| || |||||||| &5' -GGCA------ACT-CACCAGCT 3' Dtx1 mmu-miR-1933-5p beg:333 end:350 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& |||.|| | ||||||| &5' -----AAGGCC---C-CCATGAC- 3' Dtx1 mmu-miR-3099 beg:24 end:43 pic:3' AGGGGTTGGAGA-GAGATCGGAT 5'& .|||. |||||||||. &5' ------GCCTTGCCTCTAGCCTG 3' Dtx1 mmu-miR-450b-5p beg:516 end:532 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||.| ||||||||. &5' -------GAGC--ACTGCAAAG 3' Dtx1 mmu-miR-130bstar beg:312 end:331 pic:3' TCATCACGTTGTCC-CTTTCTCA 5'& || .|| ||||||| &5' ------GCTTGGGGAGAAAGAG- 3' Dtx1 mcmv-miR-m88-1 beg:623 end:646 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& .|||||.||| || ||||| &5' GGACCCTGACTTCTTCTTCT- 3' Dtx1 mcmv-miR-M23-2 beg:327 end:347 pic:3' GGCGAACTGGC--TCCGGGGGTA 5'& ||| |||||||||| &5' ------GACAGAAAGGCCCCCAT 3' Dtx1 mmu-miR-455star beg:34 end:51 pic:3' GCTACATCAGGTTTCCGTGTAT 5'& ||| || |||||||. &5' -----TAG-CCT--GGCACATG 3' Dtx1 mmu-miR-1900 beg:846 end:864 pic:3' ACTTCCTGGTCTCTCCCGCCGG 5'& ||.| .| |||||||. &5' ----GGGC---GGTGGGCGGCT 3' Dtx1 mmu-miR-1894-5p beg:310 end:326 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& ||| ||||||| &5' -----CAGCTT---GGGGAGA- 3' Dtx1 mmu-miR-702 beg:843 end:860 pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||.||| ||||||| &5' -AGTGGGC-----GGTGGGC- 3' Dtx1 mmu-miR-1197 beg:247 end:264 pic:3' TCTTCATCTG-GTACACAGGAT 5'& .| || |||||||. &5' --------GCACACGTGTCCTG 3' Dtx1 mcmv-miR-m01-1 beg:629 end:647 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& .||| || ||||.||. &5' -----TGAC-TTCTTCTTCTT- 3' Dtx1 mmu-let-7gstar beg:380 end:392 pic:3' CGTTCCGTCACCGGACATGTCA 5'& .|||||.|| &5' ------------TCTGTATAG- 3' Dtx1 mmu-miR-105 beg:566 end:591 pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& .|.||.|| |||.| || || &5' -TCGCAGGCCACTGGGGACGAGG 3' Dtx1 mmu-miR-1188 beg:217 end:241 pic:3' AGGACCGGGT--TGG--AGTGTGGT 5'& |||| | .|| |||||||| &5' ---TGGCGCTTTGCCCTTCACACCA 3' Dtx1 mmu-miR-1190 beg:847 end:866 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& |.|.| ||| |.||||| &5' GGCGGTGGG------CGGCTGA 3' Dtx1 mmu-miR-1191 beg:431 end:453 pic:3' ATCCCGATGTATCATTCTGAC 5'& .||| || |||||.|| &5' -GGGGGGACTCTGTAAGGCT- 3' Dtx1 mmu-miR-1224 beg:908 end:931 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& ||||.||| |. || .| .| &5' CTCCGCCT-CTGAGGATTGGC 3' Dtx1 mmu-miR-130bstar beg:759 end:778 pic:3' TCATCACGTTG-TCCCTTTCTCA 5'& | |.| ||||.|.||| &5' ------GGAGCGAGGGGAGGAG- 3' Dtx1 mmu-miR-135astar beg:188 end:211 pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& || | ||| | |||||||. &5' -GCAAGGGCGACT-TCCCTATG 3' Dtx1 mmu-miR-135astar beg:133 end:157 pic:3' GCGGT--GCCGAGGTTAGGGATAT 5'& |||| .||||||| |||.|. &5' -GCCAGCTGGCTCCAA--CCTGTG 3' Dtx1 mmu-miR-136 beg:524 end:542 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& ||||.| |||||.|| &5' -------CAAAGCCAATGGGGT 3' Dtx1 mmu-miR-138 beg:173 end:193 pic:3' GCCGGACTAAGTGTT-GTGGTCGA 5'& || .| .| ||||||| &5' ------GAGATAGGACCACCAGC- 3' Dtx1 mmu-miR-138star beg:545 end:567 pic:3' GGGACCACAACACTTCATCGGC 5'& ||| ||| |||||||. &5' CCCAGGTTATT--AAGTAGCT- 3' Dtx1 mmu-miR-139-5p beg:344 end:362 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||||.|| | ||||.|| &5' -----GACATGT-C-CTGTGGA 3' Dtx1 mmu-miR-150star beg:686 end:711 pic:3' GATAGGGGGTCCGG--ACATGGTC 5'& ||| .|| ||| ||||||.| &5' --ATCGTCCTTGCCTCTGTACCGG 3' Dtx1 mmu-miR-17 beg:212 end:229 pic:3' GATGGACGTGACATTCGTGAAAC 5'& || .||.||||| &5' --------ACGAT-GGCGCTTTG 3' Dtx1 mmu-miR-188-3p beg:96 end:116 pic:3' ACGTTTGGGACGTACACCCTC 5'& || || ||||||.| &5' -GCTGGTG--GC-TGTGGGGG 3' Dtx1 mmu-miR-1894-5p beg:757 end:776 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||| |||||||. &5' -----CAGGAGCGAGGGGAGG- 3' Dtx1 mmu-miR-1898 beg:649 end:668 pic:3' CTAGG-GGACACTTGGAACTGGA 5'& .||| .|| |||||||| &5' -GTCCATCT------CTTGACCT 3' Dtx1 mmu-miR-1904 beg:155 end:179 pic:3' GGAGGGAGG-TCTCCTCGTCTTG 5'& ||.|| |||| ||||||. &5' -CTTCCGGCAAGAGCAGCAGAG- 3' Dtx1 mmu-miR-1930 beg:96 end:116 pic:3' TGCGACGTCCA-TGATACCTCCA 5'& || ||| .||.|||.|| &5' -----GCTGGTGGCTGTGGGGG- 3' Dtx1 mmu-miR-1937a beg:920 end:940 pic:3' ACCC--CCGAGCAGGCCCTAA 5'& || |||| | |.||||| &5' -GGATTGGCT-G-CTGGGAT- 3' Dtx1 mmu-miR-1940 beg:6 end:39 pic:3' TTGACGAGGTGGAAGAGTCA-------GGAGGTA 5'& .||| ||.||||| | ||||.| &5' --TTGC-CCGCCTTCCCTTTTGCCTTGCCTCTA- 3' Dtx1 mmu-miR-1941-3p beg:918 end:941 pic:3' TAC-CCTCTATGACGATTCTAC 5'& || ||| .|||||..|||| &5' -TGAGGATTGGCTGCTGGGATG 3' Dtx1 mmu-miR-1942 beg:722 end:744 pic:3' GTTGGTCTACTTCTGTAGACT 5'& ||||. .|||||.||| &5' -AACCGCTCC-GGACATTTGA 3' Dtx1 mmu-miR-1946a beg:23 end:46 pic:3' TTTTCACACACGG--TGGTGA-CGGGCCGA 5'& |||| .|| || |||.||| &5' ---------TGCCTTGCCTCTAGCCTGGC- 3' Dtx1 mmu-miR-1951 beg:360 end:382 pic:3' ATCGGTGTGGT--CAGAGGTGATG 5'& |.||| |||||||.||| &5' -----ATACCTGTGTCTCCATTAC 3' Dtx1 mmu-miR-1952 beg:757 end:778 pic:3' GTCTTC-CTCCCA-CCTCT 5'& |||.|| ||||| ||||. &5' CAGGAGCGAGGGGAGGAGG 3' Dtx1 mmu-miR-1953 beg:387 end:408 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.|| | |||||||| &5' ---AGGCTCGTCC-CTTTCCCA 3' Dtx1 mmu-miR-1953 beg:603 end:625 pic:3' GTCTTCGGACTCTT---GAAAGGGT 5'& ||.|| | ||||||| &5' -----GCTTGTGTCTATCTTTCCC- 3' Dtx1 mmu-miR-1956 beg:456 end:478 pic:3' AGGCGACTGAGTC-GGGACCTGA 5'& | | .||| | ||||||.| &5' ---GGTCGCTCTGCCCCTGGGC- 3' Dtx1 mmu-miR-1967 beg:607 end:633 pic:3' CGTAGA-AG-AGGGGTCCTAGGAGT 5'& |..||| || |.|||.||| ||| &5' GTGTCTATCTTTCCCGGGACCCT-- 3' Dtx1 mmu-miR-1969 beg:597 end:621 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |. ||| || ||.||||| &5' --CTTTGTGCTTGTGTCTATCTT 3' Dtx1 mmu-miR-203star beg:173 end:189 pic:3' ACAACTTGACAGTTCTTGGTGA 5'& ||. ||.||||| &5' ----GAGAT----AGGACCAC- 3' Dtx1 mmu-miR-207 beg:316 end:341 pic:3' CTCCCTCC-TCTCGGTCCTCTTCG 5'& .||||| |||| ||| |.|| &5' -GGGGAGAAAGAGACAGAA-AGGC 3' Dtx1 mmu-miR-207 beg:759 end:776 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& .|||| |||.||.| &5' --------GGAGCGAGGGGAGG- 3' Dtx1 mmu-miR-20b beg:212 end:229 pic:3' GATGGACGTGATACTCGTGAAAC 5'& || ||| ||.||||| &5' --------ACGATG-GCGCTTTG 3' Dtx1 mmu-miR-210 beg:233 end:255 pic:3' AGTCGGCGACAGTGTGCGTGTC 5'& || || | || ||||||| &5' -CA-CCACACACAAACGCACA- 3' Dtx1 mmu-miR-2132 beg:493 end:515 pic:3' GTAG-CGCAGTTGTGGGCGG 5'& |.|| ||| . ||||.||| &5' CGTCAGCGCTGCCACCTGCC 3' Dtx1 mmu-miR-2134 beg:392 end:412 pic:3' CGTGGGGCAAAGGGTTCTG 5'& | ||| |||||||.||| &5' -CGTCCC-TTTCCCAGGAC 3' Dtx1 mmu-miR-2140 beg:686 end:709 pic:3' TGGT-GGTTCT-AGACGTGGA 5'& |.|. || | ||||.||| &5' ATCGTCCTTGCCTCTGTACC- 3' Dtx1 mmu-miR-2141 beg:1 end:21 pic:3' TTGAAAAGACT------GTGGAGGA 5'& |||| |.|||.| &5' -------CTGAGTTGCCCGCCTTC- 3' Dtx1 mmu-miR-218 beg:405 end:427 pic:3' TGTACC--AATCTAGTTCGTGTT 5'& || ||. ||||||||.. &5' ----GGACTTGAGTCAAGCACGG 3' Dtx1 mmu-miR-24 beg:462 end:479 pic:3' GACAAGGACGACTTGACTCGGT 5'& .|||| |||.||| &5' -----TCTGCCC--CTGGGCC- 3' Dtx1 mmu-miR-26b beg:827 end:846 pic:3' TGGATAGGACTTAATGAACTT 5'& ||.| ||| |.|||||| &5' ACTTCTCCC----TGCTTGAA 3' Dtx1 mmu-miR-2861 beg:459 end:481 pic:3' GGCG-GGCGGCGGTCCGGGG 5'& ||| |.||| | ||||.| &5' -CGCTCTGCCCCTGGGCCTC 3' Dtx1 mmu-miR-290-3p beg:209 end:228 pic:3' CCCGAATTTTGATCCGCCGTGAAA 5'& ||||| .|||.|||| &5' ------AAAACGA--TGGCGCTTT 3' Dtx1 mmu-miR-296-5p beg:420 end:445 pic:3' TGTCCTAACTCCCCCCC-GGGA 5'& ||.|||| | ||||||| |.|| &5' ACGGGATAGTGGGGGGGACTCT 3' Dtx1 mmu-miR-298 beg:652 end:673 pic:3' CCCTTCTTGTCGGGA---GGAGACGG 5'& || |.|| ||||||.| &5' --------CATCTCTTGACCTCTGTC 3' Dtx1 mmu-miR-298 beg:683 end:706 pic:3' CCCTTCT-TGTCGGGA--GGAGACGG 5'& |||| |. |.||| ||||||. &5' ---AAGACATCGTCCTTGCCTCTGT- 3' Dtx1 mmu-miR-3072 beg:99 end:120 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& |. |||| |||.|||||. &5' -GGTGGCTG--TGGGGGGGGT- 3' Dtx1 mmu-miR-3099 beg:297 end:320 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||.|| ||.|||| | |||.|. &5' TCTCC-ACTTCTC-CCAGCTTG 3' Dtx1 mmu-miR-30c-1star beg:386 end:409 pic:3' CCTCATTTGTT--GGGAGAGGGTC 5'& ||..| ||||.|||||| &5' ----TAGGCTCGTCCCTTTCCCAG 3' Dtx1 mmu-miR-30c-2star beg:609 end:627 pic:3' TCTCATTTGTCGGA---AGAGGGTC 5'& |.|| |.||||.| &5' ----------GTCTATCTTTCCCGG 3' Dtx1 mmu-miR-30c-2star beg:386 end:409 pic:3' TCTCATTTGT-C-GGAAGAGGGTC 5'& ||..| | || |.|||||| &5' ----TAGGCTCGTCCCTTTCCCAG 3' Dtx1 mmu-miR-323-5p beg:170 end:190 pic:3' CGCTTGCG-CGGTG-CCTGGTGGA 5'& || | |||||||| &5' ------GCAGAGATAGGACCACC- 3' Dtx1 mmu-miR-324-3p beg:836 end:858 pic:3' TCGTCGTGGAC-----CCCGTCACC 5'& .|.|| ||||.|||| &5' ------GCTTGAAAGTGGGCGGTGG 3' Dtx1 mmu-miR-343 beg:759 end:776 pic:3' AGACC-CGTGTACTTCCCTCT 5'& || || ||.|||||. &5' ---GGAGC----GAGGGGAGG 3' Dtx1 mmu-miR-3474 beg:390 end:410 pic:3' CTTAGGTGCAGAGG--AGGGTCCC 5'& | |||| || ||||||| &5' -----CTCGTC-CCTTTCCCAGG- 3' Dtx1 mmu-miR-3474 beg:662 end:680 pic:3' CTTAGGT-GCAGAGGAGGGTCCC 5'& || .|||| ||||||| &5' ----CCTCTGTCTA-TCCCAGG- 3' Dtx1 mmu-miR-3475 beg:20 end:40 pic:3' AAGTTTGGTACACGGAGGTCT 5'& |. .|| ||||||.|| &5' -TTTTGCCT--TGCCTCTAG- 3' Dtx1 mmu-miR-34b-3p beg:99 end:123 pic:3' CTACCGTCACCTCAATCACTAA 5'& |.|||| ||||.| .||||| &5' GGTGGCTGTGGGGGGGGTGAT- 3' Dtx1 mmu-miR-379 beg:601 end:619 pic:3' GGATGCAAGGTATCAGATGGT 5'& || |. |||||.| &5' -----GTGCTTGTGTCTATC- 3' Dtx1 mmu-miR-379 beg:662 end:677 pic:3' GGATGCAAGGTATCAGATGGT 5'& || |||||.| &5' --------CCTCTGTCTATC- 3' Dtx1 mmu-miR-380-5p beg:866 end:883 pic:3' GCGTACAAGATACCAGTTGGTA 5'& ||| || |||||| &5' -------TCTCAGGCCAACCA- 3' Dtx1 mmu-miR-381 beg:598 end:614 pic:3' TGTCTCTCGAACGGGAACATAT 5'& .|||. |||||.| &5' --------TTTGTGCTTGTGT- 3' Dtx1 mmu-miR-382 beg:179 end:205 pic:3' GCTTAGGTGGTG---CTTGTTGAAG 5'& |.| |||||| |..|.||||| &5' -GGA-CCACCAGCAAGGGCGACTTC 3' Dtx1 mmu-miR-412 beg:102 end:122 pic:3' GCCGATCACCTGGTCCACTT 5'& |||| ||||. .||||| &5' -GGCT-GTGGGGGGGGTGA- 3' Dtx1 mmu-miR-432 beg:741 end:765 pic:3' GAC-GGGTGACTAGA-TGAGGTTCT 5'& | |||||| ||| .||.||.|| &5' --GACCCACT--TCTGGCTTCAGGA 3' Dtx1 mmu-miR-432 beg:507 end:530 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||||||||||| ||| ||| &5' CTGCCCACTGAGC-ACTGCAA-- 3' Dtx1 mmu-miR-449b beg:133 end:156 pic:3' CGGTCGATTG---TTGTGACGGA 5'& |||||||..| ||| |||. &5' GCCAGCTGGCTCCAAC-CTGT-- 3' Dtx1 mmu-miR-463 beg:656 end:677 pic:3' GATGGAATATACCACAGATAGT 5'& .|||. |||||||| &5' ---TCTTGACCTCTGTCTATC- 3' Dtx1 mmu-miR-463 beg:596 end:619 pic:3' GATGGAATATAC-CACAGATAGT 5'& ||.||.|. ||||||||| &5' --ACTTTGTGCTTGTGTCTATC- 3' Dtx1 mmu-miR-466d-5p beg:255 end:274 pic:3' GTACATGTACATGCGTGTGTGT 5'& .||| | ||| .||||.||| &5' -GTGT-CCTGT-TGCACGCAC- 3' Dtx1 mmu-miR-466f-5p beg:262 end:289 pic:3' GTACGTGTA--CGTG--TGTGTGCAT 5'& |||||. |||| ||.|||||| &5' --TGCACGCACGCACTCACGCACGTA 3' Dtx1 mmu-miR-466f-5p beg:238 end:259 pic:3' GTACGTGTACGTGTGTGTGCAT 5'& |||| ||.|||||||. &5' ----CACACAAACGCACACGTG 3' Dtx1 mmu-miR-466j beg:261 end:284 pic:3' AATGTGTGTACGTGTACGTGTGT 5'& ||.|||.|| |||| |||.|| &5' TTGCACGCACGCACT--CACGCA 3' Dtx1 mmu-miR-466k beg:230 end:256 pic:3' AGTGTACA-TGTACATGTGTGTGT 5'& ||||| ||| ||.||||| &5' TCACACCACACACAAACGCACAC- 3' Dtx1 mmu-miR-483star beg:99 end:122 pic:3' TTCTGCCCTC-CCCTCCTCACT 5'& | || | |||.||.|||| &5' --GGTGGCTGTGGGGGGGGTGA 3' Dtx1 mmu-miR-483star beg:758 end:778 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& || | ||||||||||| &5' -AGGAGCGAGGGGAGGAG--- 3' Dtx1 mmu-miR-490 beg:534 end:556 pic:3' GTCGTACCTCA-----GGAGGTCCAAC 5'& ||||.|| || ||||||| &5' ----ATGGGGTAGAAACC-CCAGGTT- 3' Dtx1 mmu-miR-532-3p beg:95 end:117 pic:3' ACGTTCGGA-ACCCACACCCTCC 5'& .||. ||| ||||||.|| &5' ----GGCTGGTGGCTGTGGGGGG 3' Dtx1 mmu-miR-532-3p beg:415 end:439 pic:3' AC-GTTCGGAACCCA--CACCCTCC 5'& | ||||| ||| |||||.|| &5' -GTCAAGCAC-GGGATAGTGGGGGG 3' Dtx1 mmu-miR-546 beg:179 end:191 pic:3' CTGAGGCACGGTGGTA 5'& | |||||| &5' ------GGACCACCA- 3' Dtx1 mmu-miR-574-5p beg:231 end:254 pic:3' TGTGTGAGTGTGTG--TGTGTGAGT 5'& ||||| ||||||| ||.||| &5' -CACAC-CACACACAAACGCAC--- 3' Dtx1 mmu-miR-615-5p beg:609 end:633 pic:3' CTAGGCTCGT-GGCCCCTGGGGG 5'& .||. || |||||||. &5' -GTCTATCTTTCCCGGGACCCT- 3' Dtx1 mmu-miR-666-5p beg:0 end:17 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& ||| || ||. ||||||| &5' GGC-CTG--AGT--TGCCCGC- 3' Dtx1 mmu-miR-669h-5p beg:271 end:299 pic:3' CGTGAGT-TGA-TATGTGG-GTACGTA 5'& ||||||| .| .|||||| |.||| &5' GCACTCACGCACGTACACCACGTGC-- 3' Dtx1 mmu-miR-669h-5p beg:781 end:804 pic:3' CGTGAGT-TGATATGTGGGTACGTA 5'& .||| .|||||||| ||| || &5' ---TTCAGGCTATACACGCAT-CA- 3' Dtx1 mmu-miR-671-5p beg:141 end:163 pic:3' GAGGTCGGGGA-GGTC-CCGAAGGA 5'& .||.|| || | ||||||| &5' ----GGCTCCAACCTGTGGCTTCC- 3' Dtx1 mmu-miR-673-5p beg:92 end:114 pic:3' GAGGTTCCTGGTC-TCGACACTC 5'& ||. |.| | .||||||.| &5' -TCT---GGCTGGTGGCTGTGGG 3' Dtx1 mmu-miR-682 beg:512 end:529 pic:3' GTCTGAAGTGACAC-TGACGTC 5'& ||||| | |||||| &5' -------CACTGAGCACTGCA- 3' Dtx1 mmu-miR-683 beg:153 end:177 pic:3' CTCCTGT--GTCGAA--TGTCGTCC 5'& |.| |.|| .|||||| &5' ---GGCTTCCGGCAAGAGCAGCAG- 3' Dtx1 mmu-miR-684 beg:196 end:217 pic:3' AACTGAACTTC--CCTTTTGA 5'& ||||| ||||||| &5' --GACTTCCCTATGGAAAAC- 3' Dtx1 mmu-miR-692 beg:312 end:326 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| ..|||| &5' ---------GCTTGGGGAGA- 3' Dtx1 mmu-miR-696 beg:235 end:258 pic:3' GGGTGTC-GTT--CGTGTGCG 5'& ||||| ||| |||||||. &5' -CCACACACAAACGCACACGT 3' Dtx1 mmu-miR-696 beg:274 end:293 pic:3' GGGTGTCGTTCGTGTGCG 5'& |.||| ||| |.|||| | &5' CTCAC-GCACGTACAC-C 3' Dtx1 mmu-miR-696 beg:182 end:202 pic:3' GGGT-GTCGTTCGTG-TGCG 5'& ||| ||||||| .| || &5' -CCACCAGCAAGGGCGAC-- 3' Dtx1 mmu-miR-698 beg:316 end:337 pic:3' TCCCTTC---CTTTGCTCTTAC 5'& |||.|| ||.|| |||| &5' -GGGGAGAAAGAGAC-AGAA-- 3' Dtx1 mmu-miR-710 beg:398 end:415 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& .|.||||.|||||| &5' -------TTTCCCAGGACTTG- 3' Dtx1 mmu-miR-743b-5p beg:504 end:524 pic:3' ACTACCTGTGGTCA---GACTTGT 5'& |||| ||||.|| &5' -------CACCTGCCCACTGAGCA 3' Dtx1 mmu-miR-743b-5p beg:795 end:813 pic:3' ACTACCTGTGGTCAGACTTGT 5'& .||.|| ||||.|| &5' ------GCATCAAGCTGAGCA 3' Dtx1 mmu-miR-744star beg:804 end:820 pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||| ||||.|| &5' ----TGAGCA----GGCAGCA- 3' Dtx1 mmu-miR-763 beg:126 end:145 pic:3' CGGTGA-CCAAGAAGGGTCGACC 5'& |||| || |||||||| &5' -CCACCAGG------CCAGCTGG 3' Dtx1 mmu-miR-764-3p beg:693 end:716 pic:3' TGTCAACGGTGATA---CCGGAGGA 5'& ||||| ||.| |||.||. &5' ----TTGCCTCTGTACCGGCTTCT- 3' Dtx1 mmu-miR-764-5p beg:515 end:526 pic:3' TCCTCCTGTACACTCGTGG 5'& |||||||. &5' -----------TGAGCACT 3' Dtx1 mmu-miR-770-3p beg:904 end:931 pic:3' GGTCGAGGTGCAG--TCC-GGGTGC 5'& ||||||||.| || ||| .. .| &5' CCAGCTCCGCCTCTGAGGATTGGC- 3' Dtx1 mmu-miR-877star beg:422 end:441 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |||| || |..|.|||| &5' -GGGAT-AGT--GGGGGGGAC- 3' Dtx1 mmu-miR-9 beg:871 end:887 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& .|| |||||.||. &5' ------GGCC----AACCAGAGG 3' Dtx1 mmu-miR-98 beg:684 end:703 pic:3' TTGTTATGTTGAAT-GATGGAGT 5'& ||| | .|.|||| &5' ------ACATCGTCCTTGCCTC- 3' Dtx1 mmu-miR-1963 beg:388 end:401 pic:3' CTTCCGGAGTACTAGAGCAGGGT 5'& |. |||||||| &5' -----------GG-CTCGTCCC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dtx1 RAID00171075 mmu-miR-3474 miRNA MIMAT0015646 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID00385071 mmu-miR-125b-5p miRNA MIMAT0000136 Dtx1 mRNA 14357 RIP-seq//RNA-seq 0.6606 Dtx1 RAID00463029 mmu-miR-7670-3p miRNA MIMAT0029847 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID00944459 mmu-miR-425-5p miRNA MIMAT0004750 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID01067336 mmu-miR-211-5p miRNA MIMAT0000668 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID01324395 mmu-miR-149-5p miRNA MIMAT0000159 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02032377 mmu-miR-210-3p miRNA MIMAT0000658 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02052445 mmu-miR-6946-5p miRNA MIMAT0027792 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02130012 mmu-miR-204-5p miRNA MIMAT0000237 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02167094 mmu-miR-183-5p miRNA MIMAT0000212 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02188184 mmu-miR-7064-5p miRNA MIMAT0028032 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02328531 mmu-miR-6945-5p miRNA MIMAT0027790 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID02734392 mmu-miR-6539 miRNA MIMAT0025584 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID03131131 mmu-miR-7025-3p miRNA MIMAT0027955 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID03166168 mmu-miR-138-5p miRNA MIMAT0000150 Dtx1 mRNA 14357 CLIP-seq//Prediction 0.6478 Dtx1 RAID03362398 mmu-miR-125a-5p miRNA MIMAT0000135 Dtx1 mRNA 14357 RIP-seq//RNA-seq 0.6606 Dtx1 RAID03578520 mmu-miR-31-5p miRNA MIMAT0000538 Dtx1 mRNA 14357 Prediction 0.1828 Dtx1 RAID03788489 mmu-miR-490-3p miRNA MIMAT0003780 Dtx1 mRNA 14357 Prediction 0.1828