SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs6159325 | snp | A/C | 0.304688 | 0.243945 | intron-variant | Smarcad1 | Mm_Celera | 6:65110046 | AAAAATGAAGAAAAT[A/C]GAATCCTTGGTTCCT | 13990 |
rs6159391 | snp | G/T | 0.359862 | 0.224567 | intron-variant | Smarcad1 | Mm_Celera | 6:65110094 | TTTGGTAATAGCTGT[G/T]AGATTGCTGAGAAAA | 13990 |
rs6159934 | snp | C/G | 0.42 | 0.183303 | intron-variant | Smarcad1 | Mm_Celera | 6:65110180 | TACTAATATGTACTT[C/G]ACATATTAATCAAGT | 13990 |
rs6160989 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Smarcad1 | Mm_Celera | 6:65110324 | TATTTTCAGTTCTAC[A/G]TATTTATCCTTCAGT | 13990 |
rs6209999 | snp | C/T | 0.304688 | 0.243945 | intron-variant | Smarcad1 | Mm_Celera | 6:65091064 | GTCAACCTCGCCTTT[C/T]ACAGGCTATCAGATT | 13990 |
rs6339542 | snp | C/G | 0.375 | 0.216506 | intron-variant | Smarcad1 | Mm_Celera | 6:65065421 | GTTTTTAAATACCTT[C/G]GAGTAATCTTAGATA | 13990 |
rs6406295 | snp | C/T | 0.415225 | 0.187619 | intron-variant | Smarcad1 | Mm_Celera | 6:65109786 | aaggTAGGAGATACT[C/T]TGAGCAGGATATAAA | 13990 |
rs6406817 | snp | C/T | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65109863 | AGATTGTTTTAAAGT[C/T]AGATTTTTCATANTT | 13990 |
rs6406834 | snp | C/T | 0.415225 | 0.187619 | intron-variant | Smarcad1 | Mm_Celera | 6:65109876 | GTNAGATTTTTCATA[C/T]TTTGAAGGTTAATGA | 13990 |
rs6406881 | snp | C/T | 0.5 | 0 | intron-variant | Smarcad1 | Mm_Celera | 6:65109906 | AAAAAAGTTATCAGT[C/T]AGNAGGAGGACCTAA | 13990 |
rs6406884 | snp | C/G | 0.5 | 0 | intron-variant | Smarcad1 | Mm_Celera | 6:65109909 | AAAGTTATCAGTNAG[C/G]AGGAGGACCTAATAT | 13990 |
rs8270122 | snp | A/G | 0.15879 | 0.232768 | downstream-variant-500B | Smarcad1 | Mm_Celera | 6:65116455 | GACAGGTGACTCGCC[A/G]ATAGGAGTTCCAATA | 13990 |
rs8270123 | snp | A/G | 0.165289 | 0.235211 | downstream-variant-500B | Smarcad1 | Mm_Celera | 6:65116525 | TTGTGCAGCCTGTAA[A/G]GAAGGGATCTACCTT | 13990 |
rs8270141 | snp | A/G | 0.235537 | 0.249581 | utr-variant-3-prime | Smarcad1 | GRCm38.p3 | 6:65115638 | ACCTCAGCACTGGGG[A/G]TGTCTTGAAAAGTAT | 13990 |
rs8270142 | snp | A/C | 0.235537 | 0.249581 | utr-variant-3-prime | Smarcad1 | GRCm38.p3 | 6:65115617 | TGAAAAGTATGAGCT[A/C]CAATAATTAACAAAT | 13990 |
rs13474112 | snp | C/T | | | missense | Smarcad1 | Mm_Celera | 6:65092564 | GGTAATAAAGGGCCT[C/T]ATTTGATTGTTGTTC | 13990 |
rs13478801 | snp | C/T | 0.391111 | 0.206368 | synonymous-codon | Smarcad1 | GRCm38.p3 | 6:65107801 | CTGTGAGGCCAACCC[C/T]GACCTGATCTTTGAA | 13990 |
rs29830977 | snp | A/G | 0.375 | 0.216506 | intron-variant | Smarcad1 | Mm_Celera | 6:65094000 | TCTTCTGCCCCTTGC[A/G]CCTCTGCCCCTTTAG | 13990 |
rs29872514 | snp | A/C | 0.32 | 0.24 | intron-variant | Smarcad1 | GRCm38.p3 | 6:65111393 | AAAAAACAAAAAAAA[A/C]CAAAAAACAAAGTGA | 13990 |
rs29923147 | snp | C/G | 0.375 | 0.216506 | intron-variant | Smarcad1 | Mm_Celera | 6:65070143 | TTTTTTTGGTTTTTC[C/G]AGACAGAGTTTCTCT | 13990 |
rs29933767 | snp | C/T | 0.475309 | 0.108333 | intron-variant | Smarcad1 | Mm_Celera | 6:65057340 | GTGTATAAAACAGCA[C/T]AGCGACCCCTGCAGG | 13990 |
rs29970770 | snp | C/T | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65095701 | TATTCAATACAAGTA[C/T]GTCAGTGTTTGAGAG | 13990 |
rs30280361 | snp | A/G | 0.33241 | 0.236027 | intron-variant | Smarcad1 | Mm_Celera | 6:65057185 | TATATTGCCTGGACA[A/G]CAGTGCTGTAAGGCC | 13990 |
rs30537564 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65091091 | GATTCTTGCTAGATG[A/G]CATAATATTCCAAAA | 13990 |
rs30537566 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65092158 | GTCCATCTAGGCCAC[A/G]TTAAGTCCTGGGCCT | 13990 |
rs30537568 | snp | G/T | 0.142012 | 0.225474 | intron-variant | Smarcad1 | Mm_Celera | 6:65092719 | ATGATACATGTCTAT[G/T]TGTTTTGCTCGCATT | 13990 |
rs30537570 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65092756 | ATTTTCCAAGAACCT[A/G]TGATGGTCATTTATT | 13990 |
rs30537572 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Smarcad1 | Mm_Celera | 6:65093879 | TTAGTCATTTATCCA[A/G]TTTTTATGAGTTAAT | 13990 |
rs30537628 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65057426 | CTGAACTCCAAAGTG[A/G]CTTGACTAGGAAAAG | 13990 |
rs30537630 | snp | A/G | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65058272 | GGGAGGTTAGGCAGC[A/G]TCACTGAGGTCACTT | 13990 |
rs30537632 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65058314 | GACTGCTTTTTTTTT[C/T]TTCTGCAGATCAGAT | 13990 |
rs30537944 | snp | G/T | 0.391111 | 0.206368 | intron-variant | Smarcad1 | Mm_Celera | 6:65112307 | ATTTATCAAAATATA[G/T]AGCTGTAAAATGCAC | 13990 |
rs30537946 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65112475 | AATTTTTGACAAGTA[A/G]TACATTAGCATAGTT | 13990 |
rs30537948 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Smarcad1 | Mm_Celera | 6:65112662 | CTGGTTTGTTTTTCC[C/T]GAAGGGATGCTTAAA | 13990 |
rs30537950 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65112786 | AAAAAGAAGTGACAC[C/T]GGGTCTAGAGAATGT | 13990 |
rs30537952 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65112846 | TTGCCCTGTGAATGA[C/T]GTGTGTATTTGCAGA | 13990 |
rs30538414 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65094121 | TCATATAATCTCTTG[G/T]TTTTTATAGATAACT | 13990 |
rs30538416 | snp | A/T | 0.35503 | 0.226867 | intron-variant | Smarcad1 | Mm_Celera | 6:65094269 | AATATAATCAAAGTA[A/T]GCTTCACTTTTAAAT | 13990 |
rs30538418 | snp | C/T | 0.391111 | 0.206368 | intron-variant | Smarcad1 | Mm_Celera | 6:65094809 | TATAAGTGTTGTCCG[C/T]AAATATAATGGAAAT | 13990 |
rs30538420 | snp | A/C | 0.475309 | 0.108333 | intron-variant | Smarcad1 | Mm_Celera | 6:65094836 | AAATCTGTTCCCAGT[A/C]AGAAATAGGAATTAG | 13990 |
rs30538422 | snp | G/T | 0.35503 | 0.226867 | intron-variant | Smarcad1 | GRCm38.p3 | 6:65095008 | TTGAACCCTTGATCC[G/T]TTTTTTTTTCACCAC | 13990 |
rs30538614 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65058434 | CAGTAGTGACATTAG[A/G]TCTTGTGGAAAGCCC | 13990 |
rs30538616 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65058464 | CTAGCTGGAAATCAG[A/C]ATTCTCATTGTGTAA | 13990 |
rs30538618 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65058835 | GCACATATAAGTGTA[C/T]AAACTGTCTGTAAAA | 13990 |
rs30538620 | snp | A/G | 0.207612 | 0.24638 | intron-variant | Smarcad1 | GRCm38.p3 | 6:65064600 | GGAATTGATAAAGCT[A/G]ATGCTGTTTCACTGT | 13990 |
rs30538623 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65066107 | ACTGTCTAACTTGAA[A/T]CTTTTAAGAGTAAAA | 13990 |
rs30538904 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Smarcad1 | Mm_Celera | 6:65113352 | TTCTAAGTTGTTACA[A/G]ACAAGAACATTTTAG | 13990 |
rs30538906 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65113978 | TACCCAGAGAGTAGA[A/G]CACATGAAAGTACTC | 13990 |
rs30538908 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Smarcad1 | Mm_Celera | 6:65113990 | AGAACACATGAAAGT[A/G]CTCCTGTAGTTTTGA | 13990 |
rs30538910 | snp | A/G | 0.132653 | 0.220748 | utr-variant-3-prime | Smarcad1 | Mm_Celera | 6:65114373 | TGTGAAGGAGAGCGC[A/G]GAATTCCTGATTGAT | 13990 |
rs30538912 | snp | G/T | 0.244898 | 0.249948 | utr-variant-3-prime | Smarcad1 | Mm_Celera | 6:65115066 | ATTAACTCTGCCTTC[G/T]CTTGTGTGTGTTGCT | 13990 |
rs30539214 | snp | A/C | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65095020 | TCCGTTTTTTTTTCA[A/C]CACTCCCAGGTTCAA | 13990 |
rs30539216 | snp | G/T | 0.391111 | 0.206368 | intron-variant | Smarcad1 | Mm_Celera | 6:65095594 | TTTGCTCTCAAATTG[G/T]CTGCTTCCCAAGTAT | 13990 |
rs30539218 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65095637 | TAGAACTGTTTCATA[C/T]AGATTTTCTTTTGGT | 13990 |
rs30539220 | snp | A/G | 0.152778 | 0.230321 | intron-variant | Smarcad1 | Mm_Celera | 6:65095638 | AGAACTGTTTCATAT[A/G]GATTTTCTTTTGGTT | 13990 |
rs30539222 | snp | A/C | 0.165289 | 0.235211 | intron-variant | Smarcad1 | Mm_Celera | 6:65095695 | CATAAATATTCAATA[A/C]AAGTACGTCAGTGTT | 13990 |
rs30539575 | snp | A/G | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65066967 | GGCAGCTATATCCAT[A/G]CAATACACCTTTACT | 13990 |
rs30539577 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65067569 | ATAGTAGTTCTTTGT[A/G]CCATGCTAGTAATCT | 13990 |
rs30539579 | snp | A/T | 0.459184 | 0.136902 | intron-variant | Smarcad1 | GRCm38.p3 | 6:65067922 | GCTTGAAGAATTGTT[A/T]GGGTTAGTACTTGGA | 13990 |
rs30539581 | snp | A/C/G | 0.244898 | 0.249948 | intron-variant | Smarcad1 | Mm_Celera | 6:65068412 | AAAATCATAGCTAGA[A/C/G]CACACACTTAACAGC | 13990 |
rs30539583 | snp | A/G | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65068500 | TTTAAAAAGCTTGTG[A/G]ATGGAAGGTGTTTGT | 13990 |
rs30539794 | snp | A/T | 0.244898 | 0.249948 | utr-variant-3-prime | Smarcad1 | Mm_Celera | 6:65115168 | CATTTCCTTCTGCTG[A/T]ATCACCAAGATCAGC | 13990 |
rs30539798 | snp | A/T | 0.244898 | 0.249948 | utr-variant-3-prime | Smarcad1 | Mm_Celera | 6:65115697 | AATCCTACAGTGCTA[A/T]TTTTTTTTCAGGTAT | 13990 |
rs30539800 | snp | C/T | 0.244898 | 0.249948 | utr-variant-3-prime | Smarcad1 | Mm_Celera | 6:65115848 | TCACAGTACCCAGGT[C/T]GCTTAGTCAAGTTGT | 13990 |
rs30539802 | snp | C/T | 0.132653 | 0.220748 | downstream-variant-500B | Smarcad1 | Mm_Celera | 6:65116193 | GTACATAAAATGAAT[C/T]CTCAATTGTCCTTTC | 13990 |
rs30540011 | snp | A/G | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65044862 | AAAGCTTTTAAGTTT[A/G]TGTGGCCAGAACAAT | 13990 |
rs30540013 | snp | C/T | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65046366 | TGAATGAAAACAAGC[C/T]TGCTATATTTTAGTT | 13990 |
rs30540054 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Smarcad1 | Mm_Celera | 6:65096270 | AGCTTTTCCTTTAAA[A/G]TTCTTTTTGCTTTTG | 13990 |
rs30540056 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Smarcad1 | Mm_Celera | 6:65097810 | AGAGAACACCCATTC[C/T]TGATATTCTTAAGAT | 13990 |
rs30540058 | snp | G/T | 0.336735 | 0.234472 | intron-variant | Smarcad1 | Mm_Celera | 6:65098127 | ATTGACTTTGTTTTC[G/T]TTCTGCAAATACATA | 13990 |
rs30540060 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Smarcad1 | Mm_Celera | 6:65098270 | GATGTTTGTATCTAA[A/G]TACCAACTAGTCTGG | 13990 |
rs30540062 | snp | A/T | 0.336735 | 0.234472 | intron-variant | Smarcad1 | Mm_Celera | 6:65099235 | CTGTCACTTTGATTT[A/T]AAAAAAATGTATATA | 13990 |
rs30540475 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Smarcad1 | Mm_Celera | 6:65068699 | GTTGATAATTTTATT[C/G]TGTGCAGTTACCTTA | 13990 |
rs30540477 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Smarcad1 | GRCm38.p3 | 6:65071693 | TTTGGCATGTAATCC[C/T]CTTCCTTTTGTTGTC | 13990 |
rs30540478 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Smarcad1 | Mm_Celera | 6:65072154 | ATGTTGTTTGAGTTA[A/G]ACTGTGCAAATTTAA | 13990 |
rs30540480 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Smarcad1 | Mm_Celera | 6:65072445 | AAGATCTTCCTTTCC[A/G]GATAAACAAAACTGT | 13990 |
rs30540482 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Smarcad1 | Mm_Celera | 6:65073099 | GATAGTGATATAAAT[C/T]CTTTATTTTTCAGTG | 13990 |
rs30540905 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65047694 | GCTGGGTCCTGTCTA[A/G]ATATATGTAACCGTT | 13990 |
rs30540907 | snp | G/T | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65047946 | GGATGACACTCTGTC[G/T]TATAGTAGTTCCAGT | 13990 |
rs30540909 | snp | A/C | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65048445 | CTATTATATCATTGG[A/C]CTCAAACTTAATATT | 13990 |
rs30540911 | snp | C/T | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Smarcad1 | GRCm38.p3 | 6:65049180 | GTATTATTTTACTTG[C/T]TTATTTACTTAAATT | 13990 |
rs30540913 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Smarcad1 | GRCm38.p3 | 6:65049207 | AATTTGTATGGTGGC[A/G]AAAGGACGTCTATGC | 13990 |
rs30540944 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Smarcad1 | Mm_Celera | 6:65099532 | CTCCACCATCCACCA[A/T]CCATGCTATAGCCCT | 13990 |
rs30540946 | snp | C/T | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65099563 | AGCCTGAGTGAGATA[C/T]ACTTTCCAGGCATAG | 13990 |
rs30540948 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Smarcad1 | Mm_Celera | 6:65099574 | GATATACTTTCCAGG[A/C]ATAGATAACTTGATA | 13990 |
rs30540950 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Smarcad1 | Mm_Celera | 6:65099837 | GCCTTTTATGAGAAA[A/G]AAGAGTTTGCTAATC | 13990 |
rs30540953 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Smarcad1 | Mm_Celera | 6:65107184 | ATACCTACACTATTT[A/G]TATCCTGTAAATGCC | 13990 |
rs30541394 | snp | C/T | 0.260355 | 0.249785 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65073724 | TTTCTAACCAAAAAT[C/T]AAATAGACTTAAGCA | 13990 |
rs30541396 | snp | A/T | 0.142012 | 0.225474 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65073819 | TTTATTCAATTATGT[A/T]TTTTACATGGGCAAT | 13990 |
rs30541398 | snp | C/T | 0.260355 | 0.249785 | synonymous-codon, upstream-variant-2KB, nc-transcript-variant | Smarcad1 | Mm_Celera | 6:65075042 | AGGCAAAATTCTTCA[C/T]TTCCTTCAAGTTTCT | 13990 |
rs30541400 | snp | C/T | 0.207612 | 0.24638 | intron-variant, utr-variant-5-prime | Smarcad1 | GRCm38.p3 | 6:65075626 | GCCCACATGCCAGCC[C/T]GAGTGCTTTATGCTT | 13990 |
rs30541402 | snp | C/T | 0.260355 | 0.249785 | intron-variant | Smarcad1 | Mm_Celera | 6:65076704 | TGTTTTAAAAAAATC[C/T]TTAGCAACTTAACAT | 13990 |
rs30541755 | snp | C/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Smarcad1 | GRCm38.p3 | 6:65049214 | ATGGTGGCAAAAGGA[C/T]GTCTATGCGTCTGTG | 13990 |
rs30541757 | snp | C/T | 0.375 | 0.216506 | intron-variant, utr-variant-5-prime | Smarcad1 | Mm_Celera | 6:65049841 | TTAAAAAGTTGTGTT[C/T]GCTTGGGCAAACTGC | 13990 |
rs30541759 | snp | C/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65050335 | TTAGTATTATTTGGC[C/T]TTTTGAAGCATGGTC | 13990 |
rs30541761 | snp | A/C | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65050648 | CCAACATAGGGCAGG[A/C]GCGTAGTTCTCCTGT | 13990 |
rs30541763 | snp | A/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Smarcad1 | Mm_Celera | 6:65050674 | CCTGTGGGAGGCACT[A/G]TTTGCAGTCCCTAGA | 13990 |
rs30541785 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Smarcad1 | Mm_Celera | 6:65107288 | TCCTTGTATACATTA[A/G]TAATGGCTATCTTAA | 13990 |
rs30541787 | snp | A/G | 0.32 | 0.24 | intron-variant | Smarcad1 | Mm_Celera | 6:65107332 | GGTAGAATGAGAGGA[A/G]TTTCTTATCTGTAAG | 13990 |
rs30541789 | snp | A/G | 0.336735 | 0.234472 | synonymous-codon | Smarcad1 | Mm_Celera | 6:65107888 | CATTAATAGTTACCA[A/G]TTAGACATGGATTTA | 13990 |