DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004542 | mmu-miR-191* | 232286 | Tmf1 | cccuugcUUUAGGUUCACGUCg | | || :|| ||||| | acacuuaAUAUAUAAAUGCAGa | 2 | 16 | 37 | 58 | [mm9:6:97105290-97105311:-] | 0.5652 | 123 | 0 | -9.82 | -0.1565 |
MIMAT0000377 | mmu-miR-299* | 232286 | Tmf1 | uacauacacccugcCAUUUGgu | |||||| | ccaucaaacuaaauGUAAACac | 3 | 9 | 19 | 40 | [mm9:6:97105308-97105329:-] | 0.5809 | 120 | 0 | -5.37 | -0.2672 |
MIMAT0004627 | mmu-miR-20a* | 232286 | Tmf1 | gaaauucacgagcaUUACGUCa | ||||||| | acacuuaauauauaAAUGCAGa | 2 | 9 | 37 | 58 | [mm9:6:97105290-97105311:-] | 0.5652 | 140 | 7 | -8.60 | -1.3422 |
MIMAT0004631 | mmu-miR-29a* | 232286 | Tmf1 | gacUUGUGGUUU---UCUUUA-GUCa | |||||: || | |||| ||| | guaAACACUUAAUAUAUAAAUGCAGa | 2 | 20 | 33 | 58 | [mm9:6:97105290-97105315:-] | 0.5652 | 122 | 0 | -7.92 | -1.3259 |
MIMAT0004640 | mmu-miR-325 | 232286 | Tmf1 | aacuauccuccacgaGUUAUUu | |||||| | auaaaugcagacuucCAAUAAa | 2 | 8 | 48 | 69 | [mm9:6:97105279-97105300:-] | 0.5652 | 120 | 6 | -4.85 | -0.3632 |
MIMAT0002106 | mmu-miR-465a-5p | 232286 | Tmf1 | aguguagucacgguaaGAUUUAu | |||||| | uuguauucccaucaaaCUAAAUg | 2 | 8 | 11 | 33 | [mm9:6:97105315-97105337:-] | 0.5809 | 120 | 6 | -9.46 | -0.2791 |
MIMAT0005448 | mmu-miR-467b | 232286 | Tmf1 | guauAUGUACGUCCGUGAAUg | || |||:| |||||| | aaacUAAAUGUAAACACUUAa | 2 | 18 | 24 | 44 | [mm9:6:97105304-97105324:-] | 0.5809 | 133 | 6 | -10.75 | -0.6697 |
MIMAT0003500 | mmu-miR-710 | 232286 | Tmf1 | gaguugagagggguUCUGAAcc | |||||| | uaauauauaaaugcAGACUUcc | 3 | 9 | 42 | 63 | [mm9:6:97105285-97105306:-] | 0.5652 | 120 | 0 | -8.77 | -0.2197 |
MIMAT0003512 | mmu-miR-450b-3p | 232286 | Tmf1 | uacguACGUUUUAC--AAGGGUua | || |: || |||||| | -cuucUGAAGUUUGUAUUCCCAuc | 3 | 18 | 1 | 23 | [mm9:6:97105325-97105347:-] | 0.5809 | 124 | 0 | -9.47 | -0.2191 |
MIMAT0004871 | mmu-miR-465b-5p | 232286 | Tmf1 | gucUAGUCGUGGUAAGAUUUAu | ||: ||:|| |||||| | uguAUUCCCAUCAAACUAAAUg | 2 | 20 | 12 | 33 | [mm9:6:97105315-97105336:-] | 0.5809 | 131 | 6 | -11.46 | -0.2695 |
MIMAT0004873 | mmu-miR-465c-5p | 232286 | Tmf1 | gucUAGUCGCGGUAAGAUUUAu | ||: | :|| |||||| | uguAUUCCCAUCAAACUAAAUg | 2 | 20 | 12 | 33 | [mm9:6:97105315-97105336:-] | 0.5809 | 123 | 6 | -8.98 | -0.2743 |
MIMAT0004892 | mmu-miR-568 | 232286 | Tmf1 | cacacaUAUGUAAAUAUGUa | || | |||||| | | caauaaAUUCUUUUAUAGAa | 2 | 15 | 63 | 82 | [mm9:6:97105266-97105285:-] | 0.5495 | 122 | 0 | -7.49 | -0.2112 |
MIMAT0005293 | mmu-miR-467e | 232286 | Tmf1 | uguauAUGUACGAGUGUGAAUa | || |||: ||||||| | caaacUAAAUGUAAACACUUAa | 2 | 18 | 23 | 44 | [mm9:6:97105304-97105325:-] | 0.5809 | 157 | 7 | -10.90 | -1.3396 |
MIMAT0005855 | mmu-miR-467h | 232286 | Tmf1 | uguauAUGUACGUGUGUGAAUa | || |||:| ||||||| | caaacUAAAUGUAAACACUUAa | 2 | 18 | 23 | 44 | [mm9:6:97105304-97105325:-] | 0.5809 | 165 | 7 | -12.03 | -1.3396 |
MIMAT0009402 | mmu-miR-1938 | 232286 | Tmf1 | cuGGCUUGAUGU-UCAGGGUGGc | |:||| | :: | |||||:| | uuCUGAAGUUUGUAUUCCCAUCa | 2 | 21 | 2 | 24 | [mm9:6:97105324-97105346:-] | 0.5809 | 139 | 0 | -16.97 | -0.1102 |
MIMAT0009417 | mmu-miR-1950 | 232286 | Tmf1 | acUGGUAUAGGAAUCUACGUCu | ||: || : || |||||| | acACUUAAUAUAUAAAUGCAGa | 2 | 21 | 37 | 58 | [mm9:6:97105290-97105311:-] | 0.5652 | 128 | 6 | -11.04 | -0.5671 |
MIMAT0000148 | mmu-miR-136 | 232286 | Tmf1 | ggUAGU-AGUU-U-UGUUUACCUCa | | || |:|| | |:||||| || | uaAACACUUAAUAUAUAAAUGCAGa | 2 | 21 | 34 | 58 | [mm9:6:97105290-97105314:-] | 0.5652 | 125 | 0 | -8.52 | -0.1110 |
MIMAT0000215 | mmu-miR-186 | 232286 | Tmf1 | ucGGGUUUUCCUCUUAAGAAAc | :|||| | |||||||| | cuUCCAAUA----AAUUCUUUu | 2 | 21 | 59 | 76 | [mm9:6:97105272-97105289:-] | 0.5495 | 147 | 7 | -8.99 | -1.2375 |
MIMAT0000368 | mmu-miR-291a-3p | 232286 | Tmf1 | cgUGUGUUUCACCUUCGUGAAa | | || || || || ||||| | ucAAACUAAAUGUAAACACUUa | 2 | 21 | 22 | 43 | [mm9:6:97105305-97105326:-] | 0.5809 | 136 | 0 | -7.14 | -0.1208 |
MIMAT0000372 | mmu-miR-294 | 232286 | Tmf1 | ugUGUGUUUUCCCUUCGUGAAa | | || ||| | || ||||| | ucAAACUAAAUGUAAACACUUa | 2 | 21 | 22 | 43 | [mm9:6:97105305-97105326:-] | 0.5809 | 136 | 0 | -5.74 | -0.1208 |
MIMAT0000373 | mmu-miR-295 | 232286 | Tmf1 | ucUGAGUUUUCAUCAUCGUGAAa | ||| ||| ||| | ||||| | aaACU-AAAUGUA--AACACUUa | 2 | 22 | 24 | 43 | [mm9:6:97105305-97105324:-] | 0.5809 | 128 | 0 | -6.60 | -0.1108 |
MIMAT0000380 | mmu-miR-302a | 232286 | Tmf1 | agUGGUUU--UGUACCUUCGUGAAu | |:|||| | ||| || ||||| | ccAUCAAACUAAAUGUAAACACUUa | 2 | 22 | 19 | 43 | [mm9:6:97105305-97105329:-] | 0.5809 | 140 | 0 | -15.83 | -0.1220 |
MIMAT0004651 | mmu-miR-340-5p | 232286 | Tmf1 | uuagucagagUAACGAAAUAUu | ||| :|||||| | cuuccaauaaAUUCUUUUAUAg | 2 | 13 | 59 | 80 | [mm9:6:97105268-97105289:-] | 0.5495 | 136 | 6 | -5.33 | -0.1199 |
MIMAT0000597 | mmu-miR-346 | 232286 | Tmf1 | ucuccguccgugagccCGUCUGu | |||||| | cacuuaauauauaaauGCAGACu | 2 | 8 | 38 | 60 | [mm9:6:97105288-97105310:-] | 0.5652 | 120 | 6 | -10.34 | -0.2886 |
MIMAT0000667 | mmu-miR-33 | 232286 | Tmf1 | acguuacguugaugUUACGUg | |||||| | acacuuaauauauaAAUGCAg | 2 | 8 | 37 | 57 | [mm9:6:97105291-97105311:-] | 0.5652 | 120 | 6 | -7.37 | -0.2832 |
MIMAT0000677 | mmu-miR-7a | 232286 | Tmf1 | uguUGUUUUAGUGAUCAGAAGGu | |:| || ::| || ||||| | aauAUAUAAAUGC-AGACUUCCa | 2 | 21 | 43 | 64 | [mm9:6:97105284-97105305:-] | 0.5652 | 126 | 0 | -11.28 | -0.1411 |
MIMAT0000678 | mmu-miR-7b | 232286 | Tmf1 | uguUGUUUUAGUGUUCAGAAGGu | |:| || ::| || ||||| | aauAUAUAAAUGC-AGACUUCCa | 2 | 21 | 43 | 64 | [mm9:6:97105284-97105305:-] | 0.5652 | 126 | 0 | -12.50 | -0.1411 |
MIMAT0000679 | mmu-miR-217 | 232286 | Tmf1 | agGUCAGUCA-AGGACUACGUCau | || |:| | | : |||||| | aaCACUUAAUAUAUAAAUGCAGac | 3 | 22 | 36 | 59 | [mm9:6:97105289-97105312:-] | 0.5652 | 128 | 0 | -8.48 | -0.3685 |
MIMAT0000746 | mmu-miR-381 | 232286 | Tmf1 | ugucucucgaacggGAACAUAu | :|||||| | -----cuucugaagUUUGUAUu | 2 | 9 | 1 | 17 | [mm9:6:97105331-97105347:-] | 0.5809 | 124 | 6 | -6.91 | -0.1075 |
MIMAT0003374 | mmu-miR-302b | 232286 | Tmf1 | gaUGAUUUUGUACCUUCGUGAAu | ||||| ||| || ||||| | aaACUAA---AUGUAAACACUUa | 2 | 22 | 24 | 43 | [mm9:6:97105305-97105324:-] | 0.5809 | 133 | 0 | -11.24 | -0.1220 |
MIMAT0003377 | mmu-miR-302d | 232286 | Tmf1 | ugugAGUUUG---UACCUUCGUGAAu | |||||| ||| || ||||| | cccaUCAAACUAAAUGUAAACACUUa | 2 | 20 | 18 | 43 | [mm9:6:97105305-97105330:-] | 0.5809 | 138 | 0 | -13.86 | -0.1220 |
MIMAT0003456 | mmu-miR-495 | 232286 | Tmf1 | uucuucacguggUACAAACAaa | | |||||| | ------cuucugAAGUUUGUau | 3 | 11 | 1 | 16 | [mm9:6:97105332-97105347:-] | 0.5809 | 122 | 0 | -4.74 | -0.1091 |
MIMAT0004941 | mmu-miR-544 | 232286 | Tmf1 | cucgaacgAUUUUUACGUCUua | || ||||||||| | acuuaauaUAUAAAUGCAGAcu | 3 | 15 | 39 | 60 | [mm9:6:97105288-97105309:-] | 0.5652 | 142 | 0 | -12.79 | -0.2378 |
MIMAT0005850 | mmu-miR-1192 | 232286 | Tmf1 | uuaaaccAGACAAACAAACAaa | |||| |||||| | -----cuUCUG-AAGUUUGUau | 3 | 16 | 1 | 16 | [mm9:6:97105332-97105347:-] | 0.5809 | 125 | 0 | -8.25 | -0.1058 |